View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18674_low_28 (Length: 445)
Name: NF18674_low_28
Description: NF18674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18674_low_28 |
 | |
|
| [»] scaffold0294 (2 HSPs) |
| | |
|
| [»] scaffold0373 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 422; Significance: 0; HSPs: 24)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 1 - 426
Target Start/End: Original strand, 5341909 - 5342334
Alignment:
| Q |
1 |
agagggaatagagttgaccaggtatatgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5341909 |
agagggaatagagttgaccaggtatatgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
5342008 |
T |
|
| Q |
101 |
gagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5342009 |
gagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggc |
5342108 |
T |
|
| Q |
201 |
agtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagact |
300 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5342109 |
agtagaatggaactgtgcattagaaaaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagact |
5342208 |
T |
|
| Q |
301 |
gagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattg |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5342209 |
gagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattg |
5342308 |
T |
|
| Q |
401 |
gaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
5342309 |
gaataagtgttcttgttgagcgaagc |
5342334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 426
Target Start/End: Complemental strand, 5183739 - 5183314
Alignment:
| Q |
1 |
agagggaatagagttgaccaggtatatgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
100 |
Q |
| |
|
||||| |||||||||||||| || || |||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||| |||| | |
|
|
| T |
5183739 |
agaggtaatagagttgaccaagtttacaaaatgaaaataatggatgaaagcgaatcaattgagctatttagttggcatgcattcaagcaagcaggtccta |
5183640 |
T |
|
| Q |
101 |
gagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggc |
200 |
Q |
| |
|
|||| ||||||| ||||||||| ||||||||| ||||||| ||| |||||||| |||||| ||||||| || || |||||||||||||||| ||| |
|
|
| T |
5183639 |
gagaaggttttgctggaatttcaagaaatgtagttgagtattctgggggattgccactagctctggaagtccttggatcatatttgtttgatatggggat |
5183540 |
T |
|
| Q |
201 |
agtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagact |
300 |
Q |
| |
|
|| ||||||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||| ||| || || |
|
|
| T |
5183539 |
agaagaatggaagtgtgcattagaaaaactcaaaagaattcctaatgatcaagtacaaaagaagttaaaaataagctacgatgctctaagtgatgacacc |
5183440 |
T |
|
| Q |
301 |
gagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattg |
400 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||| | | | ||||||||||||||| |
|
|
| T |
5183439 |
gagaaagaaatattccttgacatagcttgtttctttattgggatggacaggaatgatgttatacatatattaaatggtagcgaattttttgcagaaattg |
5183340 |
T |
|
| Q |
401 |
gaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|| ||||||| ||||||||| ||||| |
|
|
| T |
5183339 |
gagtaagtgtccttgttgagagaagc |
5183314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 31 - 422
Target Start/End: Original strand, 5423998 - 5424389
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
130 |
Q |
| |
|
|||||| | ||||||| || ||||||| |||||||||| ||||||||||| ||||||||||| ||||| | | | | ||||| || ||||||| ||||| |
|
|
| T |
5423998 |
atgaaacacatggatgaaagtgaatcaattgagctattaagttggcatgccttcaagcaagcgagtcctacaaaagattttgctgaaatttctagaaatg |
5424097 |
T |
|
| Q |
131 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaact |
230 |
Q |
| |
|
|||| || |||| |||||||||||| |||||||||||||| || || ||||||||||| || |||||| ||||||||| ||||||| ||||||| |
|
|
| T |
5424098 |
tagttgattattctggtggattgccactagctttggaagtccttgggtcatatttgttcgacagagggattacagaatggaaaagtgcattggaaaaact |
5424197 |
T |
|
| Q |
231 |
taaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgt |
330 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||| |
|
|
| T |
5424198 |
caaaagaattcctaataatcaagtacaggagaagttaagaataagctatgatgctttaaatgatgatactgagaaagaaatattccttgacatagcttgt |
5424297 |
T |
|
| Q |
331 |
ttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcg |
422 |
Q |
| |
|
||||||||||| |||||| |||||||||| | || ||||||||||| |||||||||||||| ||||||||||||||| | ||||||||||| |
|
|
| T |
5424298 |
ttctttattggaatggacagaaatgatgttacacttatattaaatggatgtggactttttgctgaaattggaataagtatccttgttgagcg |
5424389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 426
Target Start/End: Complemental strand, 5075518 - 5075093
Alignment:
| Q |
1 |
agagggaatagagttgaccaggtatatgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
100 |
Q |
| |
|
|||||||||||||||||||| || | |||||||||||||||| || ||||||| ||||||| |||||||||||||| ||||| ||||||||||| | |
|
|
| T |
5075518 |
agagggaatagagttgaccaagtgtgcaaaatgaaagaaatggatgaaagtgaatcaattgagctttttagttggcatgcattcaaacaagcaagtccta |
5075419 |
T |
|
| Q |
101 |
gagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggc |
200 |
Q |
| |
|
||| | ||||| ||||||||| ||||||||| ||||||| ||| ||||||||||||||| | |||| | || ||||||||||||||||| ||| |
|
|
| T |
5075418 |
tagaagattttgctggaatttcaagaaatgtagtggagtattctgggggattgccgctagctctacaagtcattgggtcatatttgtttgatagggggat |
5075319 |
T |
|
| Q |
201 |
agtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagact |
300 |
Q |
| |
|
|| ||| ||||| |||| ||| | ||||| | |||||||||||| ||||||| || |||||||||||||||||||||||||||||||| || || ||| |
|
|
| T |
5075318 |
agcagagtggaagtgtgtattggagaaactcataagaattcctaatgatcaagtgcagaagaagttaaaaataagctatgatggtttaaacgatgacact |
5075219 |
T |
|
| Q |
301 |
gagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattg |
400 |
Q |
| |
|
||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||| | || ||||||||||| |||| ||||||||| ||||||| |
|
|
| T |
5075218 |
gagaagaaaatattcctcgacatagcttgtttctttattgggatggatcgaaatgatgttacacttatattaaatggatgtgaactttttgctgaaattg |
5075119 |
T |
|
| Q |
401 |
gaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|| ||||||| ||||||||||||||| |
|
|
| T |
5075118 |
gagtaagtgtacttgttgagcgaagc |
5075093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 31 - 426
Target Start/End: Original strand, 5395288 - 5395683
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
130 |
Q |
| |
|
|||||||||||||| | || |||||| ||||||| |||||||||||||| ||||||||||| ||||||||||| | ||||| | |||||| ||||| |
|
|
| T |
5395288 |
atgaaagaaatggacggaagcgaatcaattgagctctttagttggcatgcattcaagcaagcgagtccaagagaagattttgcagaaatttcaagaaatg |
5395387 |
T |
|
| Q |
131 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaact |
230 |
Q |
| |
|
|||| ||||||| ||| |||||||| |||||| ||||||| || || ||| |||||||||| || || ||| ||||| |||| |||| ||||| | |
|
|
| T |
5395388 |
tagttgagtattctgggggattgccactagctctggaagtccttggatcacatttgtttgaattgggattagcagagtggaagtgtgtattagaaaaaat |
5395487 |
T |
|
| Q |
231 |
taaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgt |
330 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||| |
|
|
| T |
5395488 |
caaaagaattcctaatgatcaagttcaaaagaagttaaaaataagctatgatgctttaaatgatgacactgagaaagaaatattccttgacatagcttgt |
5395587 |
T |
|
| Q |
331 |
ttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|| ||||||||||||||| | |||||||| ||||| ||||||||||| | | ||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
5395588 |
ttttttattgggatggacaggaatgatgttatacatatattaaatggtagcgaactttttgcagaaattggagtaagtgtccttgttgagcgaagc |
5395683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 31 - 425
Target Start/End: Complemental strand, 5068831 - 5068437
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
130 |
Q |
| |
|
|||||| | ||||||| || ||||||| || |||||||||||||||| || ||||||||||| |||| | | | | ||||| || |||||| ||| | |
|
|
| T |
5068831 |
atgaaacacatggatgaaagtgaatcaattaagctatttagttggcacgcattcaagcaagcgggtcctacaaaagattttgctgcaatttccagaaagg |
5068732 |
T |
|
| Q |
131 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaact |
230 |
Q |
| |
|
| || ||||||| ||| |||||||| |||||||||||||| || || ||||||||||||||||||| || | ||||||||| ||| ||| | ||||| |
|
|
| T |
5068731 |
tcgttgagtattctgggggattgccactagctttggaagtccttgggtcatatttgtttgatagagaggtaacagaatggaaaagtgtattggacaaact |
5068632 |
T |
|
| Q |
231 |
taaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgt |
330 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||| |
|
|
| T |
5068631 |
caaaagaattcctaataatcaagtacaggagaagttaagaataagctatgatgctttaaatgatgatactgagaaagaaatattccttgacatagcttgt |
5068532 |
T |
|
| Q |
331 |
ttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaag |
425 |
Q |
| |
|
||||||||||||||||||||||||||||| | || ||||||||||| || ||||||||||| ||||||||||||||| | |||||||||||||| |
|
|
| T |
5068531 |
ttctttattgggatggaccgaaatgatgttacacttatattaaatggatgcggactttttgctgaaattggaataagtatccttgttgagcgaag |
5068437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 51 - 426
Target Start/End: Complemental strand, 5356353 - 5355978
Alignment:
| Q |
51 |
tgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtgga |
150 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||||||||| | | | | ||| | ||||||||| ||||||||| ||||||| ||| ||| |
|
|
| T |
5356353 |
tgaatcaattgagctatttagttggcatgcattcaagcaagcaagtcctacaaaagatttagctggaatttccagaaatgtagttgagtattctggagga |
5356254 |
T |
|
| Q |
151 |
ttgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatc |
250 |
Q |
| |
|
|| ||||| ||| | ||||| || || || |||||||| || || | || || || ||| || |||| || | ||||| ||||||||||||||||| | |
|
|
| T |
5356253 |
ttaccgctggctctagaagtccttgggtcgtatttgttcgacagggaggtagcggagtggtacagtgccttggagaaactcaaaagaattcctaacaacc |
5356154 |
T |
|
| Q |
251 |
aagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccg |
350 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
5356153 |
aagtacaaaagaaactaaaaataagctatgatggtttaaatgatgatgccgagaaagaaatatttcttgacatagcttgtttctttattgggatcgaccg |
5356054 |
T |
|
| Q |
351 |
aaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|||||||| | || |||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
5356053 |
aaatgatgctacactaatattaaatggatgtggactttatgctgaaattggaataagtattcttgttgagcgaagc |
5355978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 17 - 425
Target Start/End: Complemental strand, 5104643 - 5104235
Alignment:
| Q |
17 |
accaggtatatgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttgg |
116 |
Q |
| |
|
|||| ||||||| |||||| | ||||||| || ||||||| |||||||||||||||||||||| |||||||||| ||||| | | | | |||| ||| |
|
|
| T |
5104643 |
accatgtatatgaaatgaaacacatggatgaaagtgaatcaattgagctatttagttggcatgcattcaagcaagtgagtccgacaaaagattttattga |
5104544 |
T |
|
| Q |
117 |
aatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgt |
216 |
Q |
| |
|
| ||||| ||||||||| ||||||| ||| || ||||| ||||| |||||||| || || |||||||| || ||||||| | | ||||||||| || |
|
|
| T |
5104543 |
attttctagaaatgtagttgagtattctggggggttgccactagcattggaagtccttgggtcatatttattcgatagagaagtaagagaatggaaaagt |
5104444 |
T |
|
| Q |
217 |
gcattataaaaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttc |
316 |
Q |
| |
|
|||| | ||||| |||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| || | ||||||||||||||| | |
|
|
| T |
5104443 |
acattggacaaactcaaaagaattcctaataatcaagtacaaaagaagttaagaataagctacgatggtttaaatgatgacattgagaaagaaatattcc |
5104344 |
T |
|
| Q |
317 |
ttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgt |
416 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||||| || | || |||||| |||| |||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
5104343 |
tcgatgtagcttgtttctttattgggatggaccgaaatgacgttacacttatattagatggatgtggactttttgcagaaattggaataagtatccttgt |
5104244 |
T |
|
| Q |
417 |
tgagcgaag |
425 |
Q |
| |
|
||||||||| |
|
|
| T |
5104243 |
tgagcgaag |
5104235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 51 - 422
Target Start/End: Original strand, 5094306 - 5094677
Alignment:
| Q |
51 |
tgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtgga |
150 |
Q |
| |
|
||||||| ||||| |||||||||||||||| ||||||||||| ||||| | | | | |||||||| ||||||| ||||||||| ||||||| ||| || |
|
|
| T |
5094306 |
tgaatcaattgagttatttagttggcatgcattcaagcaagcgagtcctacaaacgattttgttgaaatttctagaaatgtagttgagtattctgggggg |
5094405 |
T |
|
| Q |
151 |
ttgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatc |
250 |
Q |
| |
|
||||| ||||| |||||||| || || |||||||| || ||||| | || | ||||||||| ||||||| | ||||| |||||||||||||| |||| |
|
|
| T |
5094406 |
ttgccactagcattggaagtccttgggtcatatttattcgatagggaggtaacagaatggaaaagtgcattggacaaactcaaaagaattcctaataatc |
5094505 |
T |
|
| Q |
251 |
aagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccg |
350 |
Q |
| |
|
|| |||| |||||||||| |||||||||||||| ||||||||| || | ||||||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
5094506 |
aattacagaagaagttaagaataagctatgatgctttaaatgatgacattgagaaagaaatattccttgatgtagcttgtttctttattgggatggaccg |
5094605 |
T |
|
| Q |
351 |
aaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcg |
422 |
Q |
| |
|
|||||| || | || ||||||||||| |||||||||||||| ||||||||||||||| | ||||||||||| |
|
|
| T |
5094606 |
aaatgacgttacacttatattaaatggatgtggactttttgctgaaattggaataagtatccttgttgagcg |
5094677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 31 - 425
Target Start/End: Original strand, 5368705 - 5369099
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
130 |
Q |
| |
|
|||||| | ||||||| || ||||||| |||||||||| ||||||||||| || |||||||| ||||| | | ||||| | ||||||| ||||| |
|
|
| T |
5368705 |
atgaaacacatggatgaaagtgaatcaattgagctattcagttggcatgcatttaagcaagcgagtcctgcgaaagattttgctaaaatttctagaaatg |
5368804 |
T |
|
| Q |
131 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaact |
230 |
Q |
| |
|
|||| ||||||| ||| |||||||| ||||||||||||||| | || |||||||||||||| |||||| | ||||||||| ||||||| | ||||| |
|
|
| T |
5368805 |
tagtggagtattctgggggattgccactagctttggaagttattgggtcatatttgtttgacagagggataacagaatggaaaagtgcattggacaaact |
5368904 |
T |
|
| Q |
231 |
taaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgt |
330 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| |||||||||||||| ||||||||| || ||||||||||||||| ||||| |||||||| |
|
|
| T |
5368905 |
caaaagaattcctaataatcaagtacagaagaagttaagaataagctatgatgctttaaatgatgattatgagaaagaaatattccttgatgtagcttgt |
5369004 |
T |
|
| Q |
331 |
ttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaag |
425 |
Q |
| |
|
||||||||||||| ||||||||||||||| | || |||||| |||| |||||||||||||| ||||||||||||||| | |||||||||||||| |
|
|
| T |
5369005 |
ttctttattgggaaggaccgaaatgatgttacacttatattagatggatgtggactttttgctgaaattggaataagtatccttgttgagcgaag |
5369099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 5148746 - 5148341
Alignment:
| Q |
1 |
agagggaatagagttgaccaggtatatgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
100 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||| | ||||||| || ||| |||||||||||||| ||||||||||| ||||| | |
|
|
| T |
5148746 |
agagggaatagagttgaccatgtatacaaaatgaaagaaatggatgaaggtgaatcaattatgctttttagttggcatgcattcaagcaagcgagtccta |
5148647 |
T |
|
| Q |
101 |
gagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggc |
200 |
Q |
| |
|
|||| | ||||| |||||| || || |||| ||||||| || || ||||||||||| |||||||| | || || ||||| |||||||| ||| |
|
|
| T |
5148646 |
gagaagattttgctggaatatccagaaggatagttgagtatttggggcgactgccgctagctctggaagttattgggtcgtatttatttgatagggggat |
5148547 |
T |
|
| Q |
201 |
agtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagact |
300 |
Q |
| |
|
| |||| ||||| |||| ||| | ||||| ||||||||||| || ||||||| || ||||||||||||||||||||||| | ||||||||| | | |
|
|
| T |
5148546 |
aatagagtggaagtgtgtattggacaaactcaaaagaattcccaatgatcaagtgcagaagaagttaaaaataagctatgacgatttaaatgatgttctt |
5148447 |
T |
|
| Q |
301 |
gagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattg |
400 |
Q |
| |
|
| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||| |
|
|
| T |
5148446 |
gtgaaagaaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacatatattaaatggctgtgaactttatgcagaaattg |
5148347 |
T |
|
| Q |
401 |
gaataa |
406 |
Q |
| |
|
|||||| |
|
|
| T |
5148346 |
gaataa |
5148341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 126 - 425
Target Start/End: Original strand, 5348715 - 5349014
Alignment:
| Q |
126 |
aaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataa |
225 |
Q |
| |
|
||||||||| ||||||| ||| |||||||| |||||||||||||| || || |||| |||||||||||||||| | ||||||||| ||| ||| | |
|
|
| T |
5348715 |
aaatgtagttgagtattctggaggattgccactagctttggaagtccttgggtcattattgtttgatagaggggtaacagaatggaaaagtgtattggac |
5348814 |
T |
|
| Q |
226 |
aaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatag |
325 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| | ||||||| ||||||||| |||| ||| ||||| || ||||||||||||||||| |||||||||| |
|
|
| T |
5348815 |
aaactcaaaagaattcctaataatcaagtacaggaaaagttaagaataagctacgatgctttgaatgatgatactgagaaagaaatattccttgacatag |
5348914 |
T |
|
| Q |
326 |
cttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaag |
425 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | || ||||||||||| |||| ||||||||| ||||||||||||||| | ||||||| ||||| |
|
|
| T |
5348915 |
cttgtttctttattgggatggaccgaaatgatgttacacttatattaaatggatgtgaactttttgctgaaattggaataagtatctttgttgatcgaag |
5349014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 31 - 422
Target Start/End: Complemental strand, 5159258 - 5158867
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
130 |
Q |
| |
|
|||||| | ||||||| || ||||||| ||||||||||||||||||| || ||||||||||| ||||| | | | | |||||||| ||||||| ||||| |
|
|
| T |
5159258 |
atgaaacacatggatgaaagtgaatcaattgagctatttagttggcacgcattcaagcaagcgagtcctacaaacgattttgttgaaatttctagaaatg |
5159159 |
T |
|
| Q |
131 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaact |
230 |
Q |
| |
|
|||| |||||| ||| || ||||| ||||| |||||||| ||||| ||| |||| || |||| | || | ||||||||| |||| || | ||||| |
|
|
| T |
5159158 |
tagttaagtattctggggggttgccactagcattggaagtcctagggtcacatttattcaatagggaggtaacagaatggaaaagtgcgttggacaaact |
5159059 |
T |
|
| Q |
231 |
taaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgt |
330 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| ||||||||| |||| ||||||||| || ||||||||||||||| ||||| |||||||| |
|
|
| T |
5159058 |
caaaagaattcctaataatcaagtacataagaagttacgaataagctacgatgctttaaatgatgactttgagaaagaaatattccttgatgtagcttgt |
5158959 |
T |
|
| Q |
331 |
ttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcg |
422 |
Q |
| |
|
|||||||| ||||||||||||||||| || | || ||||||||||| |||| |||||||| |||||||||||||| | ||||||||||| |
|
|
| T |
5158958 |
ttctttatagggatggaccgaaatgacgttacacttatattaaatggatgtgaactttttggtgaaattggaataagcatccttgttgagcg |
5158867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 427
Target Start/End: Original strand, 5276908 - 5277334
Alignment:
| Q |
1 |
agagggaatagagttgaccaggtata-tgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtcca |
99 |
Q |
| |
|
|||||||||||||||||| | ||||| | | || ||||||||||||| |||||||||| ||||||| |||| ||||||||| ||||| |||| ||||| |
|
|
| T |
5276908 |
agagggaatagagttgacaaagtatactctaat-aaagaaatggatgaaaatgaatcaattgagctctttaattggcatgcattcaaacaagtgagtccc |
5277006 |
T |
|
| Q |
100 |
agagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagagggg |
199 |
Q |
| |
|
| ||| | ||||||| |||||| ||||||| || ||||| ||| ||||||||| ||||| | |||||||| || ||||||||||| | || |
|
|
| T |
5277007 |
atagaagaatttgttgaaatttccaaaaatgttgttatgtattctgggggattgccgttagctctagaagttcttgggcgctatttgtttgagaagaagg |
5277106 |
T |
|
| Q |
200 |
cagtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagac |
299 |
Q |
| |
|
| ||||||||| |||| ||| | ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||| | || || |
|
|
| T |
5277107 |
taacagaatggaattgtgtattgaagaaactagaaagaattcctaatgacaaagtacaaaagaagttaaaaataagctatgatggtttagacgatgatta |
5277206 |
T |
|
| Q |
300 |
tgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaatt |
399 |
Q |
| |
|
||||| |||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||| | |
|
|
| T |
5277207 |
ccagaaatcaatattcctcgacgtagcttgtttctttattgggatggacagaaatgatgttatacatatattaaatggctgtggattttttgcagaagat |
5277306 |
T |
|
| Q |
400 |
ggaataagtgttcttgttgagcgaagct |
427 |
Q |
| |
|
||||||||||| |||||||||||||||| |
|
|
| T |
5277307 |
ggaataagtgtccttgttgagcgaagct |
5277334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 41 - 426
Target Start/End: Complemental strand, 5133652 - 5133267
Alignment:
| Q |
41 |
tggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatgtagtcgagta |
140 |
Q |
| |
|
|||||| |||||| ||| ||||| |||||||||||||||| |||||| | || | ||| | | | | ||||| || ||||||| | | ||||| ||||| |
|
|
| T |
5133652 |
tggatgaaaatgagtcaattgagttatttagttggcatgcattcaagaatgcgactcccacaaaagattttgctgaaatttctagagacgtagttgagta |
5133553 |
T |
|
| Q |
141 |
ttgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaacttaaaagaatt |
240 |
Q |
| |
|
|| ||| |||||||| |||||| | ||||| || || ||||||||| | ||||| | | | | || ||| | |||| ||| | ||||| | ||||||| |
|
|
| T |
5133552 |
ttctgggggattgcctctagctctagaagtccttgggtcatatttgctagataggagtgtaatcgagtggcaatgtgtattggagaaactcagaagaatt |
5133453 |
T |
|
| Q |
241 |
cctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattg |
340 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||||||||||| ||||||||| || | ||||||||||||||| ||| ||||||||||||| ||||||| |
|
|
| T |
5133452 |
cctaataatcaagtacaaaagaagctaaaaataagctatgatgctttaaatgaagatattgagaaagaaatattccttaacatagcttgtttttttattg |
5133353 |
T |
|
| Q |
341 |
ggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|||||| ||||||||| | ||| ||||||||||| |||||||||||||| ||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
5133352 |
atatggacacaaatgatgttacacatatattaaatggttgtggactttttgccgaaattggaataagtattcttattgagagaagc |
5133267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 34 - 427
Target Start/End: Original strand, 5175114 - 5175507
Alignment:
| Q |
34 |
aaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatgtag |
133 |
Q |
| |
|
||||||||||||| || ||||||| ||||||| |||| ||||||||| ||||| |||| ||||| | ||| | ||||||| |||||| ||||||| | |
|
|
| T |
5175114 |
aaagaaatggatgaaagtgaatcaattgagctctttaattggcatgcattcaaacaagtgagtcccatagaagaatttgttgaaatttccaaaaatgttg |
5175213 |
T |
|
| Q |
134 |
tcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaacttaa |
233 |
Q |
| |
|
| |||||| ||| ||||||||| ||||| | |||||||| || ||||||||||| | || | ||||||||| |||| ||| | ||||| | |
|
|
| T |
5175214 |
ttaagtattctgggggattgccgttagctctagaagttcttgggcgctatttgtttgagaagaaggtaacagaatggaattgtgtattgaagaaactaga |
5175313 |
T |
|
| Q |
234 |
aagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttc |
333 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||||||||||||||| | || || ||||| |||||| || ||| ||||||||||| |
|
|
| T |
5175314 |
aagaattcctaatgacaaagtacaaaagaagttaaaaataagctatgatggtttagacgatgattaccagaaatcaatattcctcgacgtagcttgtttc |
5175413 |
T |
|
| Q |
334 |
tttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagct |
427 |
Q |
| |
|
||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| || ||||||||||||| |
|
|
| T |
5175414 |
tttattgggatggacagaaatgatgttatacatatattaaatggctgtggattttttgcagaagatggaataagtgtcctggttgagcgaagct |
5175507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 11 - 426
Target Start/End: Complemental strand, 5691888 - 5691473
Alignment:
| Q |
11 |
gagttgaccaggtatatgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtcc-aagagatggtt |
109 |
Q |
| |
|
||||| |||| ||||||| |||||||| ||| ||| |||||||||| | ||||| |||||||||||||| |||||||||||||| || |||| | | || |
|
|
| T |
5691888 |
gagtttaccaagtatatgaaatgaaagagatgaatgaaaatgaatcaatggagctctttagttggcatgctttcaagcaagcaagacccaagaaa-gatt |
5691790 |
T |
|
| Q |
110 |
ttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatg |
209 |
Q |
| |
|
||| || | | || |||||||||| ||||||| ||| |||||||| |||||||||||||| || || ||| |||| ||||| || || | |||||| |
|
|
| T |
5691789 |
ttgctgcattgtccaaaaatgtagttgagtattctgggggattgccactagctttggaagtccttgggtcacatttatttgacaggatggtaacagaatg |
5691690 |
T |
|
| Q |
210 |
gaactgtgcattataaaaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaa |
309 |
Q |
| |
|
| | | | ||| | ||||| ||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||| | || ||||||||| |
|
|
| T |
5691689 |
ggagagcgtattgaacaaactcaaagcaattcctaatcatcaagtacaaaaaaagttaagaataagctatgatggtttaagtgattatacggagaaagaa |
5691590 |
T |
|
| Q |
310 |
atatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtg |
409 |
Q |
| |
|
||||| |||||| | |||||||||||||||||||||| ||||||||||| |||| |||||| |||| |||| |||| ||||| ||||||||||| || |
|
|
| T |
5691589 |
atattccttgacgtggcttgtttctttattgggatggttcgaaatgatgttgtacatatattagatggttgtgatctttatgcaggaattggaataaatg |
5691490 |
T |
|
| Q |
410 |
ttcttgttgagcgaagc |
426 |
Q |
| |
|
| ||||| ||||||||| |
|
|
| T |
5691489 |
tccttgtggagcgaagc |
5691473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 51 - 426
Target Start/End: Original strand, 5381914 - 5382288
Alignment:
| Q |
51 |
tgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtgga |
150 |
Q |
| |
|
||||||| ||||||| ||||| |||||||| ||||||||| |||| || | ||| | |||| || ||||| | || | |||| || || | ||| ||| |
|
|
| T |
5381914 |
tgaatcaattgagctttttagctggcatgcattcaagcaaccaaggcctacagaagatttttttaaaatttgtaaagaaatagttgactactctggggga |
5382013 |
T |
|
| Q |
151 |
ttgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatc |
250 |
Q |
| |
|
||||| |||||| | ||||| || || || | ||||||||| || || | || ||| ||||| |||| ||| | ||| | |||| |||||| || || |
|
|
| T |
5382014 |
ttgcctctagctctagaagtccttggttcttttttgtttgaaaggggagtagcagattggaagtgtgtattggagaaaatcaaaataattcccaatgatg |
5382113 |
T |
|
| Q |
251 |
aagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccg |
350 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| | || ||||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
5382114 |
aagtacaacggaagttaaaaataagctatgatggtttaaatgacgatagcgaaaaagaaatattccttgacatagcttgtttctttatt-ggatggaccg |
5382212 |
T |
|
| Q |
351 |
aaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
||| ||||| | ||||||||||||||| ||||| |||||||| || || ||||||||||| ||||||||| ||||| |
|
|
| T |
5382213 |
aaacgatgttacacaaatattaaatgggtgtgggctttttgctgatatcggaataagtgtccttgttgagagaagc |
5382288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 39 - 426
Target Start/End: Complemental strand, 5261895 - 5261508
Alignment:
| Q |
39 |
aatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatgtagtcgag |
138 |
Q |
| |
|
|||| ||| |||||||||| ||||||| ||||||||| |||| |||||| |||| ||||| | | | |||| ||||| || | |||||||||| || |
|
|
| T |
5261895 |
aatgaatgaaaatgaatcaattgagctttttagttggaatgcattcaagaaagcgagtcctacaagagattttattggatttaccaaaaatgtagttgaa |
5261796 |
T |
|
| Q |
139 |
tattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaa-tggaactgtgcattataaaaacttaaaaga |
237 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||| || || || ||||||||||||| || | | | || ||| || ||| | ||||| |||||| |
|
|
| T |
5261795 |
tattgtggaggattgccgctagctctcgaagtccttgggtcttatttgtttgata-agacgaaatctaagtgggttcttgtattggagaaactcaaaaga |
5261697 |
T |
|
| Q |
238 |
attcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttcttta |
337 |
Q |
| |
|
|||||||| ||||||| || |||||||||| |||||| ||||||| ||| || || || |||| ||||||||||||||||||||||||||||||| | |
|
|
| T |
5261696 |
attcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttcttaa |
5261597 |
T |
|
| Q |
338 |
ttgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|||| ||||||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||| || ||||||||| ||||| |
|
|
| T |
5261596 |
ttggaatggaccgaaatgatgttatactcgtattaaatgactgtggacttcatgcagaaattggaataagcgtccttgttgagagaagc |
5261508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 226 - 427
Target Start/End: Original strand, 5431847 - 5432048
Alignment:
| Q |
226 |
aaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatag |
325 |
Q |
| |
|
||||| |||| |||||| || ||| |||||||||| ||||||||||||||||||||||||||| | || | | |||||| |||||| |||||||||| |
|
|
| T |
5431847 |
aaactcaaaacaattcccaataataaagtacaaaataagttaaaaataagctatgatggtttagacgataaatcccagaaagcaatattccttgacatag |
5431946 |
T |
|
| Q |
326 |
cttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaag |
425 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||| ||||| ||| ||||||||||| || | ||||| ||| ||||||||| || ||||||||||| || |
|
|
| T |
5431947 |
cttgtttctttattggtaaggagcgaaatgatgttatacatatactaaatggctgtcgattgtttgctgaagatggaataagagtccttgttgagcgtag |
5432046 |
T |
|
| Q |
426 |
ct |
427 |
Q |
| |
|
|| |
|
|
| T |
5432047 |
ct |
5432048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 226 - 426
Target Start/End: Complemental strand, 5285705 - 5285507
Alignment:
| Q |
226 |
aaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatag |
325 |
Q |
| |
|
||||| |||| ||||||| |||||||||| || |||||||||| |||||| ||||||| ||| || || | |||| |||||||||| ||||||| | |
|
|
| T |
5285705 |
aaactcaaaataattcctcacaatcaagtgcagaagaagttaagaataagttatgatgatttgaaagataatgatgagcaagaaatattccttgaca--g |
5285608 |
T |
|
| Q |
326 |
cttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaag |
425 |
Q |
| |
|
|||||||||| ||||| |||||| |||||||||| |||| ||||||||| ||||||||||| |||||||||||||||||| || ||||||||| |||| |
|
|
| T |
5285607 |
cttgtttcttaattggaatggacagaaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaag |
5285508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 232 - 418
Target Start/End: Original strand, 5445526 - 5445709
Alignment:
| Q |
232 |
aaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtt |
331 |
Q |
| |
|
|||||||||||| | ||||||| || |||||||||| || || ||||||||||||||| | | |||||||||||||||| ||| |||| ||||||| |
|
|
| T |
5445526 |
aaaagaattccttatgatcaagtgcagaagaagttaaggatgagttatgatggtttaaatcatg---ctgagaaagaaatattccttcacattgcttgtt |
5445622 |
T |
|
| Q |
332 |
tctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttg |
418 |
Q |
| |
|
||||| | |||||||||| ||||||||| |||| ||||||||| || ||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
5445623 |
tctttgtcgggatggaccaaaatgatgttatacttttattaaatgattgcggactttctgcagaaattggaataagtgtccttgttg |
5445709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 5285807 - 5285738
Alignment:
| Q |
124 |
gaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgata |
193 |
Q |
| |
|
||||||||||| || |||||||| ||||||||||||||| | ||||| || || || ||||||||||||| |
|
|
| T |
5285807 |
gaaaatgtagttgaatattgtggaggattgccgctagctctcgaagtccttgggtcttatttgtttgata |
5285738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 189
Target Start/End: Original strand, 5445355 - 5445483
Alignment:
| Q |
61 |
gagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctag |
160 |
Q |
| |
|
||||| ||||||||| |||| ||||||| ||| |||| | | | | ||||||| ||||||| |||||||||| || |||| || ||||||||||||| |
|
|
| T |
5445355 |
gagctttttagttggaatgcattcaagcgagcgtgtcctacaaaagattttgttagaatttccaaaaatgtagttgaatattctgagggattgccgctag |
5445454 |
T |
|
| Q |
161 |
ctttggaagttctaggctcatatttgttt |
189 |
Q |
| |
|
|| | ||||| || || || ||||||||| |
|
|
| T |
5445455 |
ctcttgaagtccttgggtcttatttgttt |
5445483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 174; Significance: 2e-93; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 426
Target Start/End: Complemental strand, 36215679 - 36215254
Alignment:
| Q |
1 |
agagggaatagagttgaccaggtatatgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
100 |
Q |
| |
|
|||||||||||||||||||| ||||| | |||||||||||||||| || ||||||| ||||||| |||||||||||||| |||||||||| || || | |
|
|
| T |
36215679 |
agagggaatagagttgaccaagtatacgcaatgaaagaaatggatgaaagtgaatcaattgagctttttagttggcatgcattcaagcaagtgaggccca |
36215580 |
T |
|
| Q |
101 |
gagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggc |
200 |
Q |
| |
|
||| | ||||| ||||||||| |||||||| ||||||| ||| | | ||| ||||| ||||||| || || ||||||||||||||||| ||| |
|
|
| T |
36215579 |
aagaagattttgctggaatttccagcaatgtagttgagtattctgggcaactaccgttagctctggaagtccttgggtcatatttgtttgatagggggat |
36215480 |
T |
|
| Q |
201 |
agtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagact |
300 |
Q |
| |
|
| |||| ||||| |||| ||| | ||||| ||||||||||| || | ||||||||||||||||||||||| |||||||| ||| ||||||| || || |
|
|
| T |
36215479 |
aatagagtggaagtgtgtattggacaaactcaaaagaattcccaatgaccaagtacaaaagaagttaaaaatgagctatgaaggtctaaatgatgacacg |
36215380 |
T |
|
| Q |
301 |
gagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattg |
400 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||| ||||||||||||||||| |
|
|
| T |
36215379 |
gagaaagaaatattccttgacatagcttgtttctttattgggatggacagaaatgatgttatacatatattaaatggaagtgaactttttgcagaaattg |
36215280 |
T |
|
| Q |
401 |
gaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|| ||||||||||||| ||||||||| |
|
|
| T |
36215279 |
gagtaagtgttcttgtagagcgaagc |
36215254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 34727494 - 34727413
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttg |
112 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||| ||| ||| | ||| ||||||| |
|
|
| T |
34727494 |
atgaaagaaatggatggcaatgaatctcttgagctttttagttggcatgcattcaagcaaccaattcctatagaaggttttg |
34727413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 349
Target Start/End: Complemental strand, 34727254 - 34727173
Alignment:
| Q |
268 |
aaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggacc |
349 |
Q |
| |
|
|||||||||| ||||||||||| ||| || || |||||||||||| ||||| || |||| |||||||||||||||||||| |
|
|
| T |
34727254 |
aaaataagctttgatggtttaagtgatgatgatgtgaaagaaatattccttgatattgcttttttctttattgggatggacc |
34727173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 18929232 - 18929291
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaa |
90 |
Q |
| |
|
|||||||||||||| | |||||||| |||||||| |||||||||||||| ||||||||| |
|
|
| T |
18929232 |
atgaaagaaatggacgacaatgaatctcttgagctttttagttggcatgcattcaagcaa |
18929291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 34735251 - 34735170
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttg |
112 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| |||||||||||||| ||||| ||| ||| ||| | ||| ||||||| |
|
|
| T |
34735251 |
atgaaagaaatggacagcaatgaatctcttgagctttttagttggcatgcattcaaacaaccaattcctatagaaggttttg |
34735170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 164; Significance: 2e-87; HSPs: 35)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 31 - 426
Target Start/End: Original strand, 4333797 - 4334192
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
130 |
Q |
| |
|
|||||||||||||||| || |||||| |||||||| ||||||| |||||| ||||||||| | ||||| | ||| | |||| || |||||| ||||| |
|
|
| T |
4333797 |
atgaaagaaatggatgaaagtgaatctcttgagctttttagtttgcatgcattcaagcaaacgagtcccacagaagatttttctgaaatttccagaaatg |
4333896 |
T |
|
| Q |
131 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaact |
230 |
Q |
| |
|
| || |||||| ||| ||||| ||||||||| | ||||| || || || |||||||||||||| | | | |||| |||| |||| ||| | ||||| |
|
|
| T |
4333897 |
ttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgtgtattggagaaact |
4333996 |
T |
|
| Q |
231 |
taaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgt |
330 |
Q |
| |
|
|||| |||||| || |||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||| |
|
|
| T |
4333997 |
caaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgt |
4334096 |
T |
|
| Q |
331 |
ttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| |
|
|
| T |
4334097 |
ttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagc |
4334192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 2 - 426
Target Start/End: Complemental strand, 4126223 - 4125802
Alignment:
| Q |
2 |
gagggaatagagttgaccaggtatatgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaag |
101 |
Q |
| |
|
||||| ||||||||||| | |||| | |||||||||||||||| || |||||| ||||| || |||||||||||||| ||||||||| | ||||| || |
|
|
| T |
4126223 |
gaggggatagagttgacaaaatatacataatgaaagaaatggatgaaagtgaatctcttgaactttttagttggcatgctttcaagcaaacgagtcctag |
4126124 |
T |
|
| Q |
102 |
agatggttttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggca |
201 |
Q |
| |
|
||||| || | || ||||||| ||||||||| | |||| ||| |||||||| |||||| | ||||| || || || |||||||||||||| | || | |
|
|
| T |
4126123 |
agatgattattctgaaatttctagaaatgtagttaaatattctgggggattgccactagctcttgaagtccttggatcctatttgtttgatagggaggta |
4126024 |
T |
|
| Q |
202 |
gtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactg |
301 |
Q |
| |
|
||| |||| |||| ||| | ||||| ||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
4126023 |
tcagagtggatttgtgtattggagaaactcaaaagaattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgat---acag |
4125927 |
T |
|
| Q |
302 |
agaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattgg |
401 |
Q |
| |
|
| ||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| || | || |||||||||||||||||||| || |||||||| |
|
|
| T |
4125926 |
aaaaatcaatattccttgacatagcttgtttcttaattgggatggaccgaaatgatgttattcttattttaaatggctgtggacttttcgctgaaattgg |
4125827 |
T |
|
| Q |
402 |
aataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
||||||||| |||||||| |||||| |
|
|
| T |
4125826 |
aataagtgtccttgttgaacgaagc |
4125802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 31 - 426
Target Start/End: Original strand, 4358655 - 4359050
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
130 |
Q |
| |
|
|||||||||||||||| || |||||| |||||||| ||||||||||| |||||||||||| |||| || ||||| | |||| || |||||| |||||| |
|
|
| T |
4358655 |
atgaaagaaatggatgaaagtgaatctcttgagctttttagttggcacgcgttcaagcaaacaaggcctagagaagatttttctgaaatttccaaaaatg |
4358754 |
T |
|
| Q |
131 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaact |
230 |
Q |
| |
|
|||| |||||| || |||||||| |||||| | ||||| || || || |||||||||||||| | | |||| |||| | || ||| | ||||| |
|
|
| T |
4358755 |
tagttaagtattctgcgggattgccactagctcttgaagtccttgggtcttatttgtttgatagggagattttagagtggagatctgtattggataaact |
4358854 |
T |
|
| Q |
231 |
taaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgt |
330 |
Q |
| |
|
||||||||||| || ||||||| || ||||||||||||||||| ||||||||||||||||| || || ||||||||||||| ||||||||| ||||| |
|
|
| T |
4358855 |
aaaaagaattcccaatgatcaagtgcataagaagttaaaaataagttatgatggtttaaatgatgatacacagaaagaaatattccttgacatatcttgt |
4358954 |
T |
|
| Q |
331 |
ttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
||||||||||| |||||||| |||||||| || | |||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||| ||||| |
|
|
| T |
4358955 |
ttctttattggaatggaccggaatgatgttattcgtatattagatggctgtggattttttgcaggaattggaataagtgtccttgttgagagaagc |
4359050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 31 - 426
Target Start/End: Original strand, 25568237 - 25568634
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
130 |
Q |
| |
|
|||||||||||| || || ||||||| ||||||| ||||| |||||||| |||||||||||||| || | ||||| ||||| || |||||| ||||| |
|
|
| T |
25568237 |
atgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctaaagatgattttgctgaaatttccagaaatg |
25568336 |
T |
|
| Q |
131 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggc--agtagaatggaactgtgcattataaaaa |
228 |
Q |
| |
|
|| | ||||||| ||| ||||||||||||||| | ||||| || || ||||||||||||||||| |||| | ||||||| | || ||| ||||| |
|
|
| T |
25568337 |
taattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgataggggggggtaacagaatgggagaatgtattggaaaaa |
25568436 |
T |
|
| Q |
229 |
cttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagctt |
328 |
Q |
| |
|
|| ||||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||| || ||| || |||| ||||| || ||||||||| |
|
|
| T |
25568437 |
ctcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcaggaagatatattcctcaacatagctt |
25568536 |
T |
|
| Q |
329 |
gtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|||||||||||||| ||| ||||||| |||| ||||| ||||| ||||| |||| ||||| ||||||||||||||||| || ||||||||||||||| |
|
|
| T |
25568537 |
gtttctttattgggttggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaacgtccttgttgagcgaagc |
25568634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 31 - 426
Target Start/End: Complemental strand, 4322859 - 4322464
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
130 |
Q |
| |
|
|||||||||||||||| || |||||| |||||||| |||||||||||||| ||||||||||| || || || | | |||| | |||||| ||||| |
|
|
| T |
4322859 |
atgaaagaaatggatgaaagtgaatctcttgagctttttagttggcatgcattcaagcaagcgaggcctagcaaagatttttcagaaatttccacaaatg |
4322760 |
T |
|
| Q |
131 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaact |
230 |
Q |
| |
|
|||| |||||| ||| |||||||||||||| | ||||| || || || |||||||||||||| | || | ||| |||| |||| ||| | ||||| |
|
|
| T |
4322759 |
tagttcagtattctgggagattgccgctagctcttgaagtccttgggtcctatttgtttgatagggaggtaacagagtggatttgtgtattggagaaact |
4322660 |
T |
|
| Q |
231 |
taaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgt |
330 |
Q |
| |
|
||||||||||| || |||||||||| ||||||||||||||||||| ||||| |||||||| || || |||||| |||||| |||||||| |||||| |
|
|
| T |
4322659 |
caaaagaattcccaatgatcaagtacatcagaagttaaaaataagctacgatggcttaaatgatgatacagagaaatcaatattccttgacattgcttgt |
4322560 |
T |
|
| Q |
331 |
ttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
||||||||||||||||| |||||||||||||| || ||||||||||| | |||| |||| |||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
4322559 |
ttctttattgggatggatcgaaatgatgtcattcatatattaaatggttctggatttttcgcagaaattggaataagtgtccttgttgagagaagc |
4322464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 31 - 426
Target Start/End: Original strand, 4343187 - 4343581
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
130 |
Q |
| |
|
|||||||||||||||| || |||||| |||||||| |||||||||||||| ||||||| | | || || ||||| | |||| || |||||| |||||| |
|
|
| T |
4343187 |
atgaaagaaatggatggaagtgaatctcttgagctttttagttggcatgcattcaagctaacgagccctagagaagatttttctgaaatttccaaaaatg |
4343286 |
T |
|
| Q |
131 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaact |
230 |
Q |
| |
|
||| ||||||||| |||||||| |||||| | ||||| || || || ||||||||||| || | | | |||| |||| | || ||| | ||||| |
|
|
| T |
4343287 |
-agttaagtattgtgcgggattgcctctagctcttgaagtccttgggtcctatttgtttgagagggagctattagagtggatttctgtattggagaaact |
4343385 |
T |
|
| Q |
231 |
taaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgt |
330 |
Q |
| |
|
|||| |||||| || || |||| || |||||||||||||||||||| |||||||||||||| || || ||||||||||||| || |||||| ||||| |
|
|
| T |
4343386 |
caaaaaaattcccaatgatgaagtgcataagaagttaaaaataagctacgatggtttaaatgatgatacacagaaagaaatattcctcgacatatcttgt |
4343485 |
T |
|
| Q |
331 |
ttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
||||||||||||||||| ||||||||||| || | ||| |||||||||||||| |||| |||||||| || |||||||| ||||||||| ||||| |
|
|
| T |
4343486 |
ttctttattgggatggatcgaaatgatgttattcgtatactaaatggctgtggatttttcgcagaaatcggcataagtgtccttgttgagagaagc |
4343581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 426
Target Start/End: Complemental strand, 4135568 - 4135144
Alignment:
| Q |
1 |
agagggaatagagttgaccaggtatatgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
100 |
Q |
| |
|
|||||| |||||||| |||| ||||| | ||| | ||||| |||| || |||||| |||||||| |||||||||||||| |||||| ||| ||||||| |
|
|
| T |
4135568 |
agaggggatagagttaaccaagtatacataatggaggaaatagatgaaagtgaatctcttgagctttttagttggcatgcattcaagaaagtgagtccaa |
4135469 |
T |
|
| Q |
101 |
gagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggc |
200 |
Q |
| |
|
|||| |||| | |||||| |||||| ||| |||||||||| ||| | ||||| ||| ||||||| || || || || |||||||||||| || |
|
|
| T |
4135468 |
gaga-aaatttgctcaaatttccataaatgttgtctagtattgtgggggactcccgctggctctggaagtccttgggtcctacttgtttgatagacaggt |
4135370 |
T |
|
| Q |
201 |
agtagaatggaactgtgcattataaaaacttaaaagaatt-cctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagac |
299 |
Q |
| |
|
| | ||||| | ||| ||| | |||| || |||||| || || ||||||| ||||||||||| |||||||||||||||||||||||||| || || |
|
|
| T |
4135369 |
aacaaaatgggagtgtctatt-ggagaactcaagagaattccccaatgatcaagtgcaaaagaagttgaaaataagctatgatggtttaaatgatgacac |
4135271 |
T |
|
| Q |
300 |
tgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaatt |
399 |
Q |
| |
|
|||| ||| ||||| |||||||| |||| |||||||||||||||||||||||| ||||| || | ||||||||||| ||||| |||||||| ||||| |
|
|
| T |
4135270 |
cgagagagatatattccttgacattgcttttttctttattgggatggaccgaaacgatgttatggatatattaaatggttgtggtctttttgctgaaatc |
4135171 |
T |
|
| Q |
400 |
ggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
||||||||||| ||||||||||||||| |
|
|
| T |
4135170 |
ggaataagtgtccttgttgagcgaagc |
4135144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 251 - 426
Target Start/End: Complemental strand, 6499871 - 6499696
Alignment:
| Q |
251 |
aagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccg |
350 |
Q |
| |
|
||||||| |||||||||||| |||||| |||||| ||||| || | || |||||| | ||||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
6499871 |
aagtacagaagaagttaaaagtaagctttgatggcttaaaagatgttacagagaaacacatattccttgatatagcttgcttctttattgggatggaccg |
6499772 |
T |
|
| Q |
351 |
aaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||| ||||||| || |||||||| | || ||||| ||||||||| |
|
|
| T |
6499771 |
aaatgatgtaatacaaatattaaatgggtgtggattttttgctgatattggaattaaagtccttgtagagcgaagc |
6499696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 31 - 426
Target Start/End: Original strand, 4351474 - 4351869
Alignment:
| Q |
31 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
130 |
Q |
| |
|
|||||||||||| ||| || |||||| ||||||| |||||||||||||| ||||||||| ||||| | ||| | |||| | |||||| ||||| |
|
|
| T |
4351474 |
atgaaagaaatgaatgaaagtgaatctcttgagcgttttagttggcatgcattcaagcaaaagagtcccaaagaagatttttccgaaatttccataaatg |
4351573 |
T |
|
| Q |
131 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaact |
230 |
Q |
| |
|
|||| |||| | ||| || |||||||||||| | ||||| || || || || ||||||||||| | | | |||| |||| |||| ||| | ||||| |
|
|
| T |
4351574 |
tagttaagtactctggagggttgccgctagctcttgaagtccttgggtcctacttgtttgatagggaagtattagactggatttgtgtattggagaaact |
4351673 |
T |
|
| Q |
231 |
taaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgt |
330 |
Q |
| |
|
|||| ||||| || | |||||| | |||| | ||||||||||||| ||||||||||||| || || |||||| |||||| ||||||||||||||| |
|
|
| T |
4351674 |
ccaaagtattcccaatgagcaagtatataagaggctaaaaataagctaccatggtttaaatgatgacacggagaaatcaatattccttgacatagcttgt |
4351773 |
T |
|
| Q |
331 |
ttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|||||||||||||| ||| |||||||||| || ||||||||| |||| ||||||| ||||||||||||||| |||||||||||| ||||| |
|
|
| T |
4351774 |
ttctttattgggatagacagaaatgatgttatttgtatattaaatagctgcagacttttcacagaaattggaataaaggttcttgttgagagaagc |
4351869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 248 - 404
Target Start/End: Original strand, 6674445 - 6674601
Alignment:
| Q |
248 |
atcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatgga |
347 |
Q |
| |
|
||||||||||||||||| | ||| |||||| ||||||||||| || | || |||||| ||||||| ||||| |||||||| ||||||||||||||||| |
|
|
| T |
6674445 |
atcaagtacaaaagaagctgaaagtaagcttcgatggtttaaaagatgttacagagaaacaaatattccttgatatagcttgcttctttattgggatgga |
6674544 |
T |
|
| Q |
348 |
ccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaat |
404 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||| | ||||||| || |||||||| |
|
|
| T |
6674545 |
ccgaaatgatgcaatacaaatattaaatgggtgtcaattttttgctgatattggaat |
6674601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 251 - 426
Target Start/End: Complemental strand, 6547427 - 6547252
Alignment:
| Q |
251 |
aagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccg |
350 |
Q |
| |
|
|||||||||||||| | ||| |||||| ||||||||||| || | || || ||| ||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
6547427 |
aagtacaaaagaagctgaaagtaagcttcgatggtttaaaagatgttacagacaaacaaatattccttgatatagcttgtttctttattgggatggacaa |
6547328 |
T |
|
| Q |
351 |
aaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|||||||| ||||||||||||||||| ||| || ||||||| || |||||||| | || ||||| ||||||||| |
|
|
| T |
6547327 |
aaatgatgcaatacaaatattaaatgggtgtagattttttgctgatattggaattaaagtccttgtagagcgaagc |
6547252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 301 - 404
Target Start/End: Original strand, 6756958 - 6757061
Alignment:
| Q |
301 |
gagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattg |
400 |
Q |
| |
|
|||||| ||||||| ||||| |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||||| ||||||| || |||| |
|
|
| T |
6756958 |
gagaaacaaatattccttgatatagcttgtttctttattgggaaggacagaaatgatgtaatacaaatattaaatgggtgtggattttttgctgatattg |
6757057 |
T |
|
| Q |
401 |
gaat |
404 |
Q |
| |
|
|||| |
|
|
| T |
6757058 |
gaat |
6757061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 248 - 419
Target Start/End: Original strand, 6794884 - 6795055
Alignment:
| Q |
248 |
atcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatgga |
347 |
Q |
| |
|
||||||||||| |||| ||||| |||| | ||||||||||| || ||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
6794884 |
atcaagtacaagagaaactaaaagtaagtttcgatggtttaaaagattttactgagaaacaaatatttcttgatatagcttgcttctttattgggatgga |
6794983 |
T |
|
| Q |
348 |
ccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttga |
419 |
Q |
| |
|
| |||||||| || |||||||||||||| |||||| ||||||| || |||||||| | ||||||||||| |
|
|
| T |
6794984 |
tcaaaatgatgcaattcaaatattaaatgggtgtggattttttgctgatattggaattaaagttcttgttga |
6795055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 301 - 423
Target Start/End: Original strand, 6814267 - 6814389
Alignment:
| Q |
301 |
gagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattg |
400 |
Q |
| |
|
|||||| ||||||| ||||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||| || |||| |
|
|
| T |
6814267 |
gagaaacaaatattccttgatatagcttgtttctttattgggagggaccgaaatgatgtaatacgaatattaaatgggtgtggatattttgctgatattg |
6814366 |
T |
|
| Q |
401 |
gaataagtgttcttgttgagcga |
423 |
Q |
| |
|
|||| | || |||||||||||| |
|
|
| T |
6814367 |
gaattaaagtccttgttgagcga |
6814389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 248 - 404
Target Start/End: Original strand, 6649495 - 6649651
Alignment:
| Q |
248 |
atcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatgga |
347 |
Q |
| |
|
|||||||||| ||||| | ||| | |||| |||||||||||| || | || |||||| ||||||| ||||| || ||||||||||||||||| ||||| |
|
|
| T |
6649495 |
atcaagtacagaagaaactgaaagtcagctttgatggtttaaaagatgtaacagagaaacaaatattccttgatattgcttgtttctttattggaatgga |
6649594 |
T |
|
| Q |
348 |
ccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaat |
404 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||| ||||||| || |||||||| |
|
|
| T |
6649595 |
ccgaaatgatgcaatacaaatattaaatgggagtggattttttgctgatattggaat |
6649651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 248 - 392
Target Start/End: Original strand, 6834608 - 6834752
Alignment:
| Q |
248 |
atcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatgga |
347 |
Q |
| |
|
|||||||||| |||||| ||| | |||||| |||||||||||| || | || ||| || |||||||||| || ||||| |||||||||||||||||||| |
|
|
| T |
6834608 |
atcaagtacagaagaagctaagagtaagctttgatggtttaaaagatgttacagagcaacaaatatttctcgatatagcctgtttctttattgggatgga |
6834707 |
T |
|
| Q |
348 |
ccgaaatgatgtcatacaaatattaaatggctgtggactttttgc |
392 |
Q |
| |
|
|| ||||||||| || |||||||||||||| ||||| ||||||| |
|
|
| T |
6834708 |
ccaaaatgatgtaattcaaatattaaatgggtgtgggttttttgc |
6834752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 248 - 384
Target Start/End: Original strand, 6714251 - 6714387
Alignment:
| Q |
248 |
atcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatgga |
347 |
Q |
| |
|
|||||||||| |||||| | ||| |||||| |||||||||||| || | || |||||| ||||||| |||| || |||||||||||||| |||||||| |
|
|
| T |
6714251 |
atcaagtacagaagaagctgaaagtaagctttgatggtttaaaagatgttacagagaaacaaatattctttgatattgcttgtttctttatcgggatgga |
6714350 |
T |
|
| Q |
348 |
ccgaaatgatgtcatacaaatattaaatggctgtgga |
384 |
Q |
| |
|
| ||||||| | ||||||||||||||||| |||||| |
|
|
| T |
6714351 |
caaaaatgatataatacaaatattaaatgggtgtgga |
6714387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 248 - 392
Target Start/End: Original strand, 6751287 - 6751431
Alignment:
| Q |
248 |
atcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatgga |
347 |
Q |
| |
|
|||||||| | || ||| ||||| |||||| ||||||||||| | | || |||||| ||||||| ||||| ||||| |||||||||||||| ||||| |
|
|
| T |
6751287 |
atcaagtatataaaaagctaaaagtaagcttcgatggtttaaagtatgttacggagaaacaaatattccttgatatagcctgtttctttattggaatgga |
6751386 |
T |
|
| Q |
348 |
ccgaaatgatgtcatacaaatattaaatggctgtggactttttgc |
392 |
Q |
| |
|
|||||||||||| || |||||||||||||| ||||| ||||||| |
|
|
| T |
6751387 |
ccgaaatgatgtaattcaaatattaaatgggtgtgggttttttgc |
6751431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 423
Target Start/End: Complemental strand, 6589564 - 6589389
Alignment:
| Q |
248 |
atcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatgga |
347 |
Q |
| |
|
|||||||||| ||||| ||||| |||||| |||||||||| || || |||||| ||||||| ||||| || ||||||||||||||||||||||| |
|
|
| T |
6589564 |
atcaagtacaggagaagctaaaagtaagcttccatggtttaaaagattttacagagaaacaaatattccttgatattgcttgtttctttattgggatgga |
6589465 |
T |
|
| Q |
348 |
ccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcga |
423 |
Q |
| |
|
| ||| ||||| ||||| ||||||||||| ||||| ||||||| || ||||| || | ||||||||||||||| |
|
|
| T |
6589464 |
caaaaaggatgtaatacagatattaaatggttgtgggttttttgctgatattgggattaaagttcttgttgagcga |
6589389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 301 - 404
Target Start/End: Original strand, 6771699 - 6771802
Alignment:
| Q |
301 |
gagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattg |
400 |
Q |
| |
|
|||||| ||||||| ||||| ||||||||||||||||||||| | ||| ||| ||||| ||||||||||||||||| |||||| ||||||| || |||| |
|
|
| T |
6771699 |
gagaaacaaatattccttgatatagcttgtttctttattggggtagacaaaaaggatgtaatacaaatattaaatgggtgtggattttttgctgatattg |
6771798 |
T |
|
| Q |
401 |
gaat |
404 |
Q |
| |
|
|||| |
|
|
| T |
6771799 |
gaat |
6771802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 426
Target Start/End: Complemental strand, 6623953 - 6623778
Alignment:
| Q |
251 |
aagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccg |
350 |
Q |
| |
|
||||||| |||||| ||||| |||||| |||||||||||| || | || ||| || ||||||| ||||| ||||| |||||||| ||||| ||||| |
|
|
| T |
6623953 |
aagtacagaagaagctaaaagtaagctttgatggtttaaaagatgttacagagcaacaaatattccttgatatagcctgtttcttgattggaatggataa |
6623854 |
T |
|
| Q |
351 |
aaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
|||||||| ||| ||||||||||||| ||||| ||||||| || |||||||| | || ||||| ||||||||| |
|
|
| T |
6623853 |
aaatgatgcaataaaaatattaaatgggtgtgggttttttgcggatattggaattaaagtccttgtagagcgaagc |
6623778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 301 - 392
Target Start/End: Original strand, 6726426 - 6726517
Alignment:
| Q |
301 |
gagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgc |
392 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||| || |||||||| ||||| ||||| ||||||| |
|
|
| T |
6726426 |
gagaaacaaatatttcttgatatagcttgtttctttattgggatggacaaaaaggatgcgatccaaatattgaatgggtgtgggttttttgc |
6726517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 6547644 - 6547578
Alignment:
| Q |
34 |
aaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
100 |
Q |
| |
|
||||||||||||| || |||||| ||||||||||| ||||||||||| ||||||||| ||||||||| |
|
|
| T |
6547644 |
aaagaaatggatgaaattgaatctcttgagctattcagttggcatgcattcaagcaaccaagtccaa |
6547578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 392
Target Start/End: Complemental strand, 6535179 - 6535035
Alignment:
| Q |
248 |
atcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatgga |
347 |
Q |
| |
|
||||||||||||||||| ||| |||||| | |||||||||||| || | || ||| || ||||||| ||||| ||||| |||||||| ||||| ||||| |
|
|
| T |
6535179 |
atcaagtacaaaagaagctaagaataagttttgatggtttaaaagatgttacagagcaacaaatattccttgatatagcctgtttcttgattggaatgga |
6535080 |
T |
|
| Q |
348 |
ccgaaatgatgtcatacaaatattaaatggctgtggactttttgc |
392 |
Q |
| |
|
|| ||||| ||| ||||||||||||| ||||| ||||||| |
|
|
| T |
6535079 |
taaaactgatgcaataaaaatattaaatgggtgtgggttttttgc |
6535035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 6756665 - 6756755
Alignment:
| Q |
8 |
atagagttgaccaggtatatgtgatgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtcc |
98 |
Q |
| |
|
|||||||||| || || |||| || ||||||||||||| || ||||| |||||||| || ||||||||||| ||||||||| ||||||| |
|
|
| T |
6756665 |
atagagttgatcaagtttatgaaataaaagaaatggatgaaagcgaatctcttgagcttttcagttggcatgcattcaagcaaccaagtcc |
6756755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 6794671 - 6794736
Alignment:
| Q |
35 |
aagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
100 |
Q |
| |
|
|||||||||||| || |||||| ||| |||| || ||||||||||| ||||||||| ||||||||| |
|
|
| T |
6794671 |
aagaaatggatgaaagtgaatctcttaagcttttcagttggcatgcattcaagcaaccaagtccaa |
6794736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 6624169 - 6624106
Alignment:
| Q |
35 |
aagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtcc |
98 |
Q |
| |
|
|||||||||||| | |||||| |||||||| || ||||||||||| ||||||||| ||||||| |
|
|
| T |
6624169 |
aagaaatggatgagagtgaatctcttgagcttttcagttggcatgcattcaagcaaccaagtcc |
6624106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 6814001 - 6814064
Alignment:
| Q |
35 |
aagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtcc |
98 |
Q |
| |
|
|||||||||||| || |||||| ||| |||| || ||||||||||| ||||||||| ||||||| |
|
|
| T |
6814001 |
aagaaatggatgaaagtgaatctcttaagcttttcagttggcatgcattcaagcaaccaagtcc |
6814064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 6647482 - 6647540
Alignment:
| Q |
301 |
gagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgt |
359 |
Q |
| |
|
|||||| | ||||||||||| ||||| |||||||||| | ||||||||| ||||||||| |
|
|
| T |
6647482 |
gagaaacacatatttcttgatatagcatgtttctttaataggatggaccaaaatgatgt |
6647540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 6589761 - 6589712
Alignment:
| Q |
51 |
tgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
100 |
Q |
| |
|
|||||||||| |||| |||||||||||||| ||||| ||| ||||||||| |
|
|
| T |
6589761 |
tgaatcacttaagctgtttagttggcatgcattcaaacaaccaagtccaa |
6589712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 6672883 - 6672936
Alignment:
| Q |
35 |
aagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagc |
88 |
Q |
| |
|
|||||||||||| || |||||| || ||||| || ||||||||||||||||||| |
|
|
| T |
6672883 |
aagaaatggatgaaagtgaatctctagagcttttcagttggcatgcgttcaagc |
6672936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 6726157 - 6726222
Alignment:
| Q |
35 |
aagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
100 |
Q |
| |
|
|||||||||||| || |||||| || |||| || ||||||||||| ||||||||| ||||||||| |
|
|
| T |
6726157 |
aagaaatggatgaaagtgaatctctcaagcttttcagttggcatgcattcaagcaatcaagtccaa |
6726222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 6834394 - 6834458
Alignment:
| Q |
34 |
aaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtcc |
98 |
Q |
| |
|
||||||||||| | || |||||| |||||||| || ||||||||||| ||||||| | ||||||| |
|
|
| T |
6834394 |
aaagaaatggacgaaagtgaatctcttgagcttttcagttggcatgcattcaagctaccaagtcc |
6834458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 7871822 - 7871774
Alignment:
| Q |
300 |
tgagaaagaaatatttcttgacatagcttgtttctttattgggatggac |
348 |
Q |
| |
|
||||||||||||||| ||||| |||||| ||| ||||||||||||||| |
|
|
| T |
7871822 |
tgagaaagaaatattccttgatatagctaatttatttattgggatggac |
7871774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 7875560 - 7875512
Alignment:
| Q |
300 |
tgagaaagaaatatttcttgacatagcttgtttctttattgggatggac |
348 |
Q |
| |
|
||||||||||||||| ||||| |||||| ||| ||||||||||||||| |
|
|
| T |
7875560 |
tgagaaagaaatattccttgatatagctaatttatttattgggatggac |
7875512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 67 - 426
Target Start/End: Original strand, 8876082 - 8876443
Alignment:
| Q |
67 |
tttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatgtagtcgagtattgtggtggattgccgctagctttgg |
166 |
Q |
| |
|
|||||||||||||||||||||||| | ||||| ||||| |||||||||||| || ||||||||| ||||||| ||| |||||||| | |||| | | |
|
|
| T |
8876082 |
tttagttggcatgcgttcaagcaaccgagtcctagagaaaattttgttggaatgtccagaaatgtagttgagtattctgggggattgccaccagctctag |
8876181 |
T |
|
| Q |
167 |
aagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatcaagtacaaaagaagtt |
266 |
Q |
| |
|
||||||| || |||||||||||||| || |||| || || ||||| |||| ||| ||||||| |||| ||| || || |||||||||| ||||||| |
|
|
| T |
8876182 |
aagttcttggatcatatttgtttgaaaggggggtagccgagtggaaatgtgtattggaaaaactcaaaaaaatccccaatgatcaagtacatgagaagtt |
8876281 |
T |
|
| Q |
267 |
aaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaa |
366 |
Q |
| |
|
||||||||||||||||||| ||||||| || | || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8876282 |
aaaaataagctatgatggtctaaatgatgatattgcgaaagaaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttatacat |
8876381 |
T |
|
| Q |
367 |
ata--ttaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
||| |||||||| |||| ||||| | | |||||||||||||||||||||||||| |||||| |
|
|
| T |
8876382 |
atattttaaatgggtgtgaactttatcctgaaattggaataagtgttcttgttgaacgaagc |
8876443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 251 - 426
Target Start/End: Complemental strand, 10205 - 10030
Alignment:
| Q |
251 |
aagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccg |
350 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||||| || || || ||||| ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10205 |
aagtacaacggaagttaaaagtaagctatgatggtttaaatgatgatacagaaaaagatatattccttgacatagcttgtttctttattgggatggaccg |
10106 |
T |
|
| Q |
351 |
aaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
||| ||||| | ||||||||||||||| |||||||||||||| | || ||||||||||| ||||||||||||||| |
|
|
| T |
10105 |
aaacgatgttacacaaatattaaatggatgtggactttttgctaatatcggaataagtgtccttgttgagcgaagc |
10030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 10405 - 10333
Alignment:
| Q |
51 |
tgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttct |
123 |
Q |
| |
|
||||||| ||||||| |||||||||||||| |||||||||| || || ||||||| |||| || ||||||| |
|
|
| T |
10405 |
tgaatcaattgagctttttagttggcatgcattcaagcaagataggcctagagatgattttcttaaaatttct |
10333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 151 - 426
Target Start/End: Complemental strand, 22585958 - 22585683
Alignment:
| Q |
151 |
ttgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattataaaaacttaaaagaattcctaacaatc |
250 |
Q |
| |
|
|||||||||||| ||||||| || || |||||||||| |||||||| | ||||||| | |||| ||| | ||||| |||||||||||||| ||| |
|
|
| T |
22585958 |
ttgccgctagctctggaagtccttgggcgttatttgtttgctagaggggtaacagaatggcaatgtgtattggagaaactcaaaagaattcctaatgatc |
22585859 |
T |
|
| Q |
251 |
aagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccg |
350 |
Q |
| |
|
|||| || |||||||||| |||||| ||||||| ||| | || |||| |||||||||| ||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
22585858 |
aagtgcagaagaagttaagaataagttatgatgatttggaagatactgatgagcaagaaatattccttgacatagcttttttcttaattggaatggaccg |
22585759 |
T |
|
| Q |
351 |
aaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagc |
426 |
Q |
| |
|
||||||||| |||| |||||||||| |||||||||| |||||||||||||||||| || ||||||||| ||||| |
|
|
| T |
22585758 |
aaatgatgttatactcatattaaatgactgtggacttcatgcagaaattggaataagcgtccttgttgagagaagc |
22585683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 419
Target Start/End: Complemental strand, 11367 - 11246
Alignment:
| Q |
298 |
actgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaa |
397 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| ||||||||||||||||| | |||||||| || |||||||||||||| |||||| ||||||| || | |
|
|
| T |
11367 |
actgagaaacaaatatttcttgatatagcttgcttctttattgggatggatcaaaatgatgcaattcaaatattaaatgggtgtggattttttgctgata |
11268 |
T |
|
| Q |
398 |
ttggaataagtgttcttgttga |
419 |
Q |
| |
|
||||||| | ||||||||||| |
|
|
| T |
11267 |
ttggaattaaagttcttgttga |
11246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 11632 - 11567
Alignment:
| Q |
35 |
aagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaa |
100 |
Q |
| |
|
|||||||||||| || |||||| ||| |||| || ||||||||||| ||||||||| ||||||||| |
|
|
| T |
11632 |
aagaaatggatgaaagtgaatctcttaagcttttcagttggcatgcattcaagcaaccaagtccaa |
11567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 341
Target Start/End: Complemental strand, 3268636 - 3268565
Alignment:
| Q |
270 |
aataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgg |
341 |
Q |
| |
|
||||||||||||||||||||| | || || || || || ||||||||||||||| ||||||||||||||| |
|
|
| T |
3268636 |
aataagctatgatggtttaaagaatgatacagaaaaggatatatttcttgacatatgttgtttctttattgg |
3268565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 413
Target Start/End: Complemental strand, 3326389 - 3326250
Alignment:
| Q |
274 |
agctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaatattaa |
373 |
Q |
| |
|
||||| ||||||||||| || || | || ||||| ||||||||||||||| |||||||||||| || | ||| || || || | | | ||| ||| |
|
|
| T |
3326389 |
agctacgatggtttaaaggatgatatggaaaaagatatatttcttgacatatgttgtttctttataggcaaggatagagccgaagttacagagatactaa |
3326290 |
T |
|
| Q |
374 |
atggctgtggactttttgcagaaattggaataagtgttct |
413 |
Q |
| |
|
||||||||||||||| |||| | ||||||||||||||||| |
|
|
| T |
3326289 |
atggctgtggactttatgcaaatattggaataagtgttct |
3326250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 3287865 - 3287748
Alignment:
| Q |
270 |
aataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctttattgggatggaccgaaatgatgtcatacaaata |
369 |
Q |
| |
|
||||||||||||||| |||||| | || | || || || |||||||||||||| ||||||||||||||| | |||| ||| |||||| | | ||| |
|
|
| T |
3287865 |
aataagctatgatgggttaaatcaagatatggaaaaggatatatttcttgacatttgttgtttctttattggtaaggacagaacctatgtcacagagata |
3287766 |
T |
|
| Q |
370 |
ttaaatggctgtggactt |
387 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
3287765 |
ctaaatggctgtggactt |
3287748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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