View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18674_low_60 (Length: 346)
Name: NF18674_low_60
Description: NF18674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18674_low_60 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 327
Target Start/End: Original strand, 37116075 - 37116382
Alignment:
| Q |
18 |
tatacaaaatctatttctcatttaccattttacaattaggnnnnnnntggttgtggaaaaattgggatcaaaatcaccatgtgcaatacttagcaattaa |
117 |
Q |
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| T |
37116075 |
tatacaaaatctatttctcatttaccattttacaattaggaaaaaaatggttgtggaaaaattgagatcaaaatcaccatgtgcaatacttagcaattaa |
37116174 |
T |
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| Q |
118 |
aaaagttgagtnnnnnnnnnngcaattaaaatgtgattaaacctgtaaactaataccacacttaatcaattaataatcgttctttaaagtttaaactcaa |
217 |
Q |
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| T |
37116175 |
aaaagttgagtaaaaaaaa--gcaattaaaatgtgattaaacctgtaaactaataccacacttaatcaattaataatcgttctttaaagtttaaactcaa |
37116272 |
T |
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| Q |
218 |
ctgcacttatttattgacgtaaaataagctcgactatgcttaaatgagatatagaagaatttaaacctgacactaaaatacaattactcaaactcttgag |
317 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37116273 |
ctacacttatttattgacgtaaaataagctcgactatgcttaaatgagatatagaagaatttaaacctgacactaaaatacaattactcaaactcttgag |
37116372 |
T |
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| Q |
318 |
agttattgtc |
327 |
Q |
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|||||||||| |
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| T |
37116373 |
agttattgtc |
37116382 |
T |
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