View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18675_low_12 (Length: 246)
Name: NF18675_low_12
Description: NF18675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18675_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 27701421 - 27701646
Alignment:
| Q |
1 |
ttgaaaccctaaaaattaatgagaaattaagaatcaaataaatgtggaccccaccttttccatccaatcaatggattccatcctgccctgcaaatccaat |
100 |
Q |
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| T |
27701421 |
ttgaaaccctaaaaattaatgagaaattaagaatcaaataaatgtggaccccaccttttccatccaatcaatggattccatcctgccctgcaaatccaat |
27701520 |
T |
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| Q |
101 |
tcaccatttttcagcctattgacataatcactagcaggcaagtgatgacattctttttcaatcaaaaccttcaaattctcctcactcagcaatggaggtg |
200 |
Q |
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| T |
27701521 |
tctccatttttcagcctattgacataatcactagcaggcaagtgatgacattctttttcaatcaaaaccttcaaattctcctcactcagcaatggaggtg |
27701620 |
T |
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| Q |
201 |
gcagcaatggtggtggcacatactca |
226 |
Q |
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||| |||||||||||||||||||||| |
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| T |
27701621 |
gcaacaatggtggtggcacatactca |
27701646 |
T |
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