View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18675_low_13 (Length: 246)
Name: NF18675_low_13
Description: NF18675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18675_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 16 - 228
Target Start/End: Complemental strand, 25820866 - 25820653
Alignment:
| Q |
16 |
atgaagttctctatatagaaaattttaccaaaacttgaagtat-acaattattggtattagaagccaaatcattgttagacattaaaagtatactaattg |
114 |
Q |
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| T |
25820866 |
atgaagttctctatatagaaaattttaccaaaacttgaagtattacaattattggtatttgaagccaaatcattgttagacattaaaagtatactaattg |
25820767 |
T |
|
| Q |
115 |
atctattagttaaagttttatgctgctagtaaactaaacataacacattttactattagattatatagttttatccaaatttggtttgatattgactatg |
214 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25820766 |
atccattagttaaagttttatgctgctagtaaactaaacataacacattttactattagattatatagttttatccaaatttggtttgatattgactatg |
25820667 |
T |
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| Q |
215 |
tggaggccatgttt |
228 |
Q |
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|||||||||||||| |
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| T |
25820666 |
tggaggccatgttt |
25820653 |
T |
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