View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18678_high_69 (Length: 247)
Name: NF18678_high_69
Description: NF18678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18678_high_69 |
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Alignment Details
Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 5970378 - 5970532
Alignment:
| Q |
9 |
cacagaatcaaacacacactaagccacattagcctatattctcaaatctcaatcatgattctccgcaatataagggatcatgacacgacaattaccataa |
108 |
Q |
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| T |
5970378 |
cacagaatcaaacacacactaagccacattagcctatattctcaaatctcaatcatgattctccgcaatataagggatcatgacacgacaattaccataa |
5970477 |
T |
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| Q |
109 |
aaaccgcgacactaattattcaaacaatactccacaaagattctagtacaaagca |
163 |
Q |
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| T |
5970478 |
aaaccgcgacactaattattcaaacaatactccacaaagattctagtacaaagca |
5970532 |
T |
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