View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18678_low_79 (Length: 221)

Name: NF18678_low_79
Description: NF18678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18678_low_79
NF18678_low_79
[»] chr6 (34 HSPs)
chr6 (1-59)||(19089552-19089610)
chr6 (1-59)||(6606095-6606153)
chr6 (1-59)||(14783418-14783476)
chr6 (1-59)||(5253221-5253279)
chr6 (1-59)||(9633623-9633681)
chr6 (1-59)||(21898702-21898760)
chr6 (1-59)||(34954617-34954675)
chr6 (10-59)||(3601147-3601196)
chr6 (1-58)||(8938765-8938822)
chr6 (1-59)||(3587943-3588001)
chr6 (1-59)||(8611972-8612030)
chr6 (1-59)||(13036002-13036060)
chr6 (1-59)||(30788851-30788909)
chr6 (6-59)||(13584444-13584497)
chr6 (1-57)||(8149797-8149853)
chr6 (1-59)||(8932715-8932773)
chr6 (1-59)||(8944181-8944239)
chr6 (1-47)||(29444775-29444821)
chr6 (1-59)||(30410499-30410557)
chr6 (1-59)||(31129231-31129289)
chr6 (1-46)||(9179747-9179792)
chr6 (1-58)||(29333138-29333195)
chr6 (1-48)||(2271312-2271359)
chr6 (17-56)||(32048511-32048550)
chr6 (1-59)||(8888936-8888993)
chr6 (1-59)||(12606484-12606542)
chr6 (1-59)||(12635868-12635926)
chr6 (1-59)||(14107356-14107414)
chr6 (1-59)||(14326051-14326109)
chr6 (1-59)||(14419061-14419119)
chr6 (1-46)||(17114908-17114953)
chr6 (1-57)||(11142657-11142713)
chr6 (1-49)||(15643842-15643890)
chr6 (3-59)||(21167431-21167487)
[»] chr5 (46 HSPs)
chr5 (1-59)||(42086378-42086436)
chr5 (1-59)||(9805055-9805113)
chr5 (1-59)||(1538482-1538540)
chr5 (1-59)||(8513570-8513628)
chr5 (1-59)||(23383708-23383766)
chr5 (1-59)||(28857197-28857255)
chr5 (1-59)||(39099777-39099835)
chr5 (5-58)||(25950593-25950646)
chr5 (1-58)||(27648424-27648481)
chr5 (1-57)||(20525889-20525945)
chr5 (3-59)||(28857002-28857058)
chr5 (1-59)||(9812923-9812981)
chr5 (1-59)||(12705065-12705123)
chr5 (1-59)||(20255420-20255478)
chr5 (1-59)||(41163458-41163516)
chr5 (1-59)||(42861216-42861274)
chr5 (1-58)||(14588616-14588673)
chr5 (3-59)||(36783296-36783352)
chr5 (1-57)||(42291505-42291561)
chr5 (1-59)||(5731918-5731976)
chr5 (1-59)||(9168251-9168309)
chr5 (1-59)||(12766182-12766240)
chr5 (1-59)||(14728134-14728192)
chr5 (1-59)||(19572775-19572833)
chr5 (1-59)||(24653810-24653867)
chr5 (1-59)||(40117466-40117524)
chr5 (1-59)||(43399179-43399237)
chr5 (1-58)||(2485247-2485304)
chr5 (1-38)||(14974343-14974380)
chr5 (1-58)||(24875396-24875453)
chr5 (1-57)||(15034126-15034182)
chr5 (1-57)||(37263291-37263347)
chr5 (4-59)||(38296728-38296783)
chr5 (1-59)||(3653912-3653970)
chr5 (1-59)||(5079382-5079439)
chr5 (1-47)||(6764467-6764513)
chr5 (1-59)||(13664311-13664369)
chr5 (1-59)||(14235712-14235770)
chr5 (1-59)||(20682615-20682673)
chr5 (16-58)||(20692999-20693041)
chr5 (1-59)||(21375402-21375460)
chr5 (1-59)||(38897717-38897775)
chr5 (1-38)||(7336671-7336708)
chr5 (1-58)||(18045690-18045746)
chr5 (1-58)||(25417182-25417239)
chr5 (5-57)||(40060339-40060391)
[»] chr3 (51 HSPs)
chr3 (1-59)||(29127969-29128027)
chr3 (1-58)||(47471881-47471938)
chr3 (1-59)||(47219194-47219252)
chr3 (1-59)||(49021202-49021260)
chr3 (1-59)||(3136693-3136751)
chr3 (1-59)||(28572210-28572268)
chr3 (7-56)||(8683242-8683291)
chr3 (1-58)||(35316006-35316063)
chr3 (2-59)||(36043673-36043730)
chr3 (1-58)||(54261276-54261333)
chr3 (3-59)||(7328895-7328951)
chr3 (1-59)||(7310702-7310760)
chr3 (1-59)||(7650277-7650335)
chr3 (1-59)||(15320236-15320294)
chr3 (1-59)||(25295010-25295068)
chr3 (1-59)||(45402350-45402408)
chr3 (1-59)||(47749104-47749162)
chr3 (1-59)||(51060280-51060338)
chr3 (1-59)||(54237498-54237556)
chr3 (1-58)||(19147011-19147068)
chr3 (1-58)||(29762155-29762212)
chr3 (1-58)||(45877504-45877561)
chr3 (1-57)||(3507534-3507590)
chr3 (1-57)||(49198401-49198457)
chr3 (1-57)||(53649777-53649833)
chr3 (1-36)||(3755620-3755655)
chr3 (18-57)||(54448326-54448365)
chr3 (7-57)||(11393476-11393526)
chr3 (1-59)||(23511617-23511675)
chr3 (1-59)||(29135963-29136021)
chr3 (1-47)||(30767258-30767304)
chr3 (1-59)||(44064594-44064652)
chr3 (1-58)||(22909833-22909890)
chr3 (1-57)||(34662320-34662376)
chr3 (1-56)||(4638204-4638259)
chr3 (3-58)||(13367476-13367531)
chr3 (1-59)||(7648790-7648848)
chr3 (1-59)||(13893976-13894034)
chr3 (1-47)||(19873422-19873468)
chr3 (1-59)||(26043862-26043920)
chr3 (1-59)||(26361966-26362024)
chr3 (1-47)||(33251712-33251758)
chr3 (1-47)||(41630523-41630569)
chr3 (1-59)||(43330731-43330789)
chr3 (1-59)||(48342070-48342128)
chr3 (1-59)||(55069678-55069736)
chr3 (2-59)||(928651-928708)
chr3 (1-54)||(10040606-10040659)
chr3 (3-48)||(32522031-32522076)
chr3 (1-49)||(50405612-50405660)
chr3 (1-45)||(52364813-52364857)
[»] chr2 (46 HSPs)
chr2 (1-58)||(14169608-14169665)
chr2 (1-59)||(25540402-25540460)
chr2 (1-59)||(3643885-3643943)
chr2 (1-59)||(3811689-3811747)
chr2 (1-59)||(7747324-7747382)
chr2 (1-59)||(16325645-16325703)
chr2 (1-59)||(20116610-20116668)
chr2 (1-59)||(22593184-22593241)
chr2 (1-49)||(39201516-39201564)
chr2 (1-47)||(10026626-10026672)
chr2 (1-47)||(10046487-10046533)
chr2 (1-59)||(10823110-10823168)
chr2 (1-59)||(11069928-11069986)
chr2 (1-59)||(18902528-18902586)
chr2 (1-59)||(41220685-41220743)
chr2 (1-58)||(6358150-6358207)
chr2 (5-58)||(12864278-12864331)
chr2 (1-58)||(35946788-35946845)
chr2 (1-58)||(38962813-38962870)
chr2 (1-48)||(331551-331598)
chr2 (1-59)||(8410181-8410239)
chr2 (1-59)||(12455360-12455418)
chr2 (1-59)||(26805346-26805404)
chr2 (1-59)||(34130300-34130358)
chr2 (1-59)||(38005452-38005510)
chr2 (1-59)||(41031904-41031962)
chr2 (5-59)||(42770649-42770703)
chr2 (1-59)||(44139534-44139592)
chr2 (1-59)||(44945643-44945701)
chr2 (5-58)||(792208-792261)
chr2 (1-58)||(2550918-2550975)
chr2 (1-57)||(20612534-20612591)
chr2 (1-57)||(1773644-1773700)
chr2 (3-59)||(29422267-29422323)
chr2 (3-59)||(44023347-44023403)
chr2 (1-40)||(24179618-24179657)
chr2 (1-59)||(13026409-13026467)
chr2 (1-59)||(34346285-34346343)
chr2 (1-59)||(34722730-34722788)
chr2 (1-59)||(37560223-37560281)
chr2 (1-58)||(18649025-18649082)
chr2 (1-58)||(33005801-33005858)
chr2 (9-58)||(44773321-44773370)
chr2 (1-49)||(10669642-10669690)
chr2 (1-57)||(21642000-21642056)
chr2 (7-59)||(44548722-44548774)
[»] chr4 (47 HSPs)
chr4 (1-57)||(6032643-6032699)
chr4 (1-57)||(40780861-40780917)
chr4 (1-58)||(7246645-7246702)
chr4 (1-49)||(8889077-8889125)
chr4 (1-59)||(4738673-4738731)
chr4 (1-59)||(16450355-16450413)
chr4 (1-59)||(38075488-38075546)
chr4 (1-59)||(38166082-38166140)
chr4 (1-59)||(52950137-52950195)
chr4 (1-58)||(29895842-29895899)
chr4 (1-57)||(13073593-13073649)
chr4 (7-59)||(48834698-48834750)
chr4 (1-59)||(6779266-6779324)
chr4 (1-59)||(38168311-38168369)
chr4 (1-59)||(47682380-47682438)
chr4 (1-58)||(2559362-2559419)
chr4 (1-58)||(30317288-30317345)
chr4 (1-58)||(31588741-31588798)
chr4 (1-58)||(42722576-42722633)
chr4 (1-53)||(46108746-46108798)
chr4 (1-55)||(1940779-1940833)
chr4 (1-59)||(5472846-5472904)
chr4 (1-59)||(29588791-29588849)
chr4 (1-59)||(36145213-36145271)
chr4 (1-59)||(36262765-36262823)
chr4 (1-59)||(38841366-38841424)
chr4 (1-59)||(49260663-49260721)
chr4 (1-59)||(50485998-50486056)
chr4 (1-59)||(53599115-53599173)
chr4 (1-59)||(55921089-55921147)
chr4 (1-58)||(43458668-43458725)
chr4 (1-58)||(43468402-43468459)
chr4 (1-49)||(54946304-54946352)
chr4 (1-56)||(21429356-21429411)
chr4 (1-47)||(3507325-3507371)
chr4 (1-59)||(16645173-16645231)
chr4 (1-59)||(17080098-17080156)
chr4 (1-59)||(25406561-25406619)
chr4 (3-57)||(26237422-26237476)
chr4 (5-59)||(27531668-27531722)
chr4 (1-59)||(47078513-47078571)
chr4 (1-58)||(49952144-49952202)
chr4 (14-59)||(4986261-4986306)
chr4 (1-58)||(14567294-14567351)
chr4 (1-58)||(15829754-15829811)
chr4 (1-46)||(20532420-20532465)
chr4 (3-59)||(20128366-20128422)
[»] chr8 (27 HSPs)
chr8 (1-59)||(10927660-10927718)
chr8 (1-59)||(43027359-43027417)
chr8 (1-57)||(4479296-4479352)
chr8 (1-59)||(26570978-26571036)
chr8 (1-57)||(15884556-15884612)
chr8 (1-59)||(8141156-8141214)
chr8 (1-59)||(45521222-45521280)
chr8 (2-59)||(6100527-6100584)
chr8 (1-58)||(18374064-18374121)
chr8 (3-59)||(8997542-8997598)
chr8 (1-59)||(2467116-2467174)
chr8 (1-59)||(2964130-2964188)
chr8 (1-59)||(3418511-3418569)
chr8 (1-59)||(8803108-8803166)
chr8 (1-59)||(9859993-9860051)
chr8 (1-59)||(14846629-14846687)
chr8 (1-59)||(43032955-43033013)
chr8 (14-59)||(4772049-4772094)
chr8 (1-57)||(3379812-3379868)
chr8 (1-48)||(3567958-3568005)
chr8 (1-59)||(24837296-24837354)
chr8 (1-59)||(27975945-27976003)
chr8 (1-59)||(28033214-28033272)
chr8 (1-58)||(36662458-36662515)
chr8 (1-49)||(13357964-13358012)
chr8 (3-59)||(16893993-16894047)
chr8 (1-49)||(24938570-24938618)
[»] chr7 (41 HSPs)
chr7 (3-49)||(28396168-28396214)
chr7 (1-59)||(48804736-48804794)
chr7 (1-58)||(38578866-38578923)
chr7 (1-59)||(24983416-24983475)
chr7 (1-59)||(4195200-4195258)
chr7 (1-59)||(5069813-5069871)
chr7 (1-59)||(17748380-17748438)
chr7 (1-59)||(39420890-39420948)
chr7 (1-59)||(10047874-10047932)
chr7 (1-59)||(13095911-13095969)
chr7 (1-59)||(22974020-22974078)
chr7 (1-59)||(39474993-39475051)
chr7 (1-59)||(42032149-42032207)
chr7 (1-59)||(48551910-48551968)
chr7 (10-59)||(28744224-28744273)
chr7 (1-58)||(41945526-41945583)
chr7 (4-59)||(8734684-8734739)
chr7 (9-59)||(1606002-1606052)
chr7 (13-59)||(29152005-29152051)
chr7 (1-59)||(42210260-42210318)
chr7 (1-59)||(43861970-43862028)
chr7 (1-59)||(48244354-48244412)
chr7 (1-58)||(3353477-3353534)
chr7 (1-58)||(27028332-27028389)
chr7 (1-57)||(27875088-27875144)
chr7 (1-41)||(36619270-36619310)
chr7 (1-56)||(18785722-18785777)
chr7 (4-59)||(34127643-34127698)
chr7 (1-52)||(41267929-41267980)
chr7 (1-48)||(45697199-45697246)
chr7 (1-59)||(14650370-14650428)
chr7 (1-59)||(22993365-22993423)
chr7 (1-59)||(32768990-32769048)
chr7 (1-59)||(34659279-34659337)
chr7 (1-59)||(43925565-43925623)
chr7 (1-58)||(3603410-3603467)
chr7 (1-58)||(4705983-4706040)
chr7 (1-58)||(29805439-29805496)
chr7 (1-34)||(30827345-30827378)
chr7 (1-49)||(5039426-5039474)
chr7 (1-57)||(26423288-26423343)
[»] chr1 (47 HSPs)
chr1 (1-59)||(26325863-26325921)
chr1 (3-59)||(9659178-9659234)
chr1 (1-59)||(4581681-4581739)
chr1 (1-59)||(5855573-5855631)
chr1 (1-59)||(8764042-8764100)
chr1 (1-59)||(10172970-10173028)
chr1 (1-59)||(10422839-10422897)
chr1 (1-59)||(11397888-11397946)
chr1 (1-59)||(17642003-17642061)
chr1 (1-59)||(26660189-26660246)
chr1 (1-59)||(41663855-41663913)
chr1 (5-59)||(51437512-51437566)
chr1 (1-58)||(5504082-5504139)
chr1 (1-59)||(32922-32980)
chr1 (1-59)||(10507749-10507807)
chr1 (1-59)||(30927726-30927784)
chr1 (1-59)||(34697386-34697444)
chr1 (1-59)||(35211171-35211229)
chr1 (1-59)||(49078165-49078223)
chr1 (3-48)||(14254278-14254323)
chr1 (2-59)||(45361881-45361938)
chr1 (3-59)||(32142845-32142901)
chr1 (4-59)||(37339874-37339929)
chr1 (5-59)||(892301-892355)
chr1 (1-59)||(43959820-43959878)
chr1 (1-59)||(50094955-50095013)
chr1 (1-59)||(50503360-50503418)
chr1 (2-59)||(1764196-1764253)
chr1 (2-59)||(44969716-44969773)
chr1 (1-58)||(45726433-45726490)
chr1 (1-53)||(10336567-10336619)
chr1 (3-59)||(32150921-32150977)
chr1 (7-59)||(46929737-46929789)
chr1 (1-48)||(33418125-33418172)
chr1 (1-59)||(35908809-35908865)
chr1 (1-59)||(3850741-3850799)
chr1 (1-59)||(16956517-16956575)
chr1 (1-55)||(17092480-17092534)
chr1 (1-59)||(18915918-18915976)
chr1 (1-59)||(33498838-33498896)
chr1 (1-58)||(14357806-14357863)
chr1 (1-58)||(31576547-31576604)
chr1 (1-46)||(48761227-48761272)
chr1 (1-58)||(50371834-50371891)
chr1 (11-59)||(6899619-6899667)
chr1 (11-59)||(25178575-25178623)
chr1 (3-59)||(47084175-47084231)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-59)||(6908-6966)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-59)||(8699-8757)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-58)||(224370-224427)
scaffold0011 (1-49)||(186570-186618)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-58)||(42831-42888)
scaffold0009 (1-57)||(9495-9551)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-59)||(155709-155767)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-59)||(319475-319533)
scaffold0002 (1-59)||(623-681)
[»] scaffold0384 (1 HSPs)
scaffold0384 (1-53)||(6025-6077)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-48)||(9898-9945)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-59)||(1612-1670)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-55)||(68567-68621)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-58)||(16932-16989)
[»] scaffold0079 (1 HSPs)
scaffold0079 (17-59)||(8232-8274)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-59)||(41097-41155)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-59)||(7833-7891)
scaffold0004 (3-59)||(94978-95035)
[»] scaffold0376 (1 HSPs)
scaffold0376 (1-58)||(12723-12780)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-58)||(58032-58089)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-58)||(25138-25195)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-58)||(250024-250081)


Alignment Details
Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19089552 - 19089610
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19089552 tctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaagc 19089610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6606153 - 6606095
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  6606153 tctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 6606095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14783476 - 14783418
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  14783476 tctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 14783418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5253279 - 5253221
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||    
T  5253279 tctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaagc 5253221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9633681 - 9633623
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  9633681 tctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 9633623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21898702 - 21898760
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||    
T  21898702 tctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagc 21898760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34954675 - 34954617
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  34954675 tctacgcatgagccagattagtcgtccacctttgatgggtcggaaaccaatgcgaaagc 34954617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 3601147 - 3601196
Alignment:
Q  10 gagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  3601147 gagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 3601196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8938765 - 8938822
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||    
T  8938765 tctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaag 8938822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3588001 - 3587943
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||||||| |||||||||||    
T  3588001 tctacgcatgaaccggattagtcgtcaacctttgatggatcggaaactgatgcgaaagc 3587943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8612030 - 8611972
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||| |||||||||||| | |||||||||||||| ||||||| |||||||||    
T  8612030 tctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagc 8611972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13036060 - 13036002
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||| ||||||||||| ||  |||||||||||||||||| |||||||||    
T  13036060 tctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaaagc 13036002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30788909 - 30788851
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||| ||| ||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  30788909 tctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 30788851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 13584497 - 13584444
Alignment:
Q  6 gcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||    
T  13584497 gcatgagccggattaatcgtccacctttggtgggtcggaaaccggcgcgaaagc 13584444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8149853 - 8149797
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    ||||||||| ||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  8149853 tctacgcattagccgaattagtcgtccacctttggtgggttggaaaccggtgcgaaa 8149797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8932715 - 8932773
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||| ||  | ||||||| |||||||||||||| |||||||||    
T  8932715 tctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaagc 8932773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8944181 - 8944239
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||| ||  | ||||||| |||||||||||||| |||||||||    
T  8944181 tctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaagc 8944239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29444821 - 29444775
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaac 47  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||||    
T  29444821 tctacgcatgagccggattagttgtccatctttggtgggtcggaaac 29444775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30410499 - 30410557
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| |||||| |||   | ||||||||||||||||||||||||||||||    
T  30410499 tctacgcatgagctggattaatcgctcatctttggtgggtcggaaaccgatgcgaaagc 30410557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 31129231 - 31129289
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||| ||||||| ||  |||||||||| ||||||||||| |||||||||    
T  31129231 tctacgcatgagccagattagttgtgcacctttggtgagtcggaaaccggtgcgaaagc 31129289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9179792 - 9179747
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaa 46  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||||    
T  9179792 tctacgcatgagctggattagtcgtccacctttggtggatcggaaa 9179747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29333195 - 29333138
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||||||||| || ||||||| ||||||||| |||||| ||||| ||||||||    
T  29333195 tctacgcatgagccgaatcagtcgtccacctttggtaggtcggtaaccggtgcgaaag 29333138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2271359 - 2271312
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaacc 48  Q
    |||||||| ||||||||||||||||| ||||||| |||||| ||||||    
T  2271359 tctacgcacgagccggattagtcgtccacctttgatgggtcagaaacc 2271312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 32048511 - 32048550
Alignment:
Q  17 attagtcgtctacctttggtgggtcggaaaccgatgcgaa 56  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  32048511 attagtcgtcaacctttgatgggtcggaaaccgatgcgaa 32048550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8888936 - 8888993
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| ||||||||||||| ||||||| ||| ||| ||||| ||||||||||    
T  8888936 tctacgcatgagtcggattagtcgtccacctttgatggatcgaaaacc-atgcgaaagc 8888993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12606484 - 12606542
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | |||||||||| |  |||||||| |||||||||    
T  12606484 tctacgcacgagccggattagtcgcccacctttggtgagctggaaaccggtgcgaaagc 12606542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12635868 - 12635926
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||  |||||||||||||| | ||  |||||||||||||||||| |||||||||    
T  12635868 tctacgcacaagccggattagtcgcccactattggtgggtcggaaaccggtgcgaaagc 12635926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14107414 - 14107356
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||| | |   || ||||||||||||||| |||||||||    
T  14107414 tctacgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgcgaaagc 14107356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14326051 - 14326109
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||||   | ||||||||||||||||| || ||| |||||    
T  14326051 tctacgcatgagccggattagtcgctcatctttggtgggtcggaaaacggtgcaaaagc 14326109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14419061 - 14419119
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||||   | ||||||||||||||||| || ||| |||||    
T  14419061 tctacgcatgagccggattagtcgctcatctttggtgggtcggaaaacggtgcaaaagc 14419119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17114953 - 17114908
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaa 46  Q
    |||||||||||||||||||||||| | ||||||| | |||||||||    
T  17114953 tctacgcatgagccggattagtcgcccacctttgataggtcggaaa 17114908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11142657 - 11142713
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||||||| | ||||||| ||| | ||||||||||||||| |||| |||||||    
T  11142657 tctacgcatgagtcagattagttgtccaactttggtgggtcggagaccggtgcgaaa 11142713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15643890 - 15643842
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 49  Q
    |||||||||||| ||||||||||| | |||||| |||||||| ||||||    
T  15643890 tctacgcatgagtcggattagtcgcccacctttagtgggtcgaaaaccg 15643842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 21167431 - 21167487
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||| ||||| ||| ||| ||||| | |||||| |||||||||    
T  21167431 tacgcatgagccggattaatcgtccaccattgatgggttgaaaaccggtgcgaaagc 21167487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42086378 - 42086436
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  42086378 tctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 42086436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9805055 - 9805113
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||    
T  9805055 tctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaagc 9805113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1538482 - 1538540
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||||||| |||||||||    
T  1538482 tctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaagc 1538540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8513570 - 8513628
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  8513570 tctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 8513628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23383708 - 23383766
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| | |||||||||    
T  23383708 tctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaagc 23383766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28857197 - 28857255
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  28857197 tctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagc 28857255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 39099835 - 39099777
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| ||| |||||    
T  39099835 tctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcaaaagc 39099777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 25950646 - 25950593
Alignment:
Q  5 cgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||| ||||||||||||||| ||| |||||||||||    
T  25950646 cgcatgagccggattagtcgtccacctttggtgggtcgaaaatcgatgcgaaag 25950593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27648481 - 27648424
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  27648481 tctacgtatgagccggattagtcgtccatctttggtggatcggaaaccgatgcgaaag 27648424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20525889 - 20525945
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||||    
T  20525889 tctacgcatgagccggattagtcgtccaccattggtggatcggaaaccggtgcgaaa 20525945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 28857002 - 28857058
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  28857002 tacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagc 28857058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9812923 - 9812981
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||| |||||||||||| | |||||||||||||| ||||||| |||||||||    
T  9812923 tctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagc 9812981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12705065 - 12705123
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||| |||||||||||| | |||||||||||||| ||||||| |||||||||    
T  12705065 tctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagc 12705123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 20255420 - 20255478
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||||| | |||||||||    
T  20255420 tctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgcgaaagc 20255478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41163516 - 41163458
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||||| | |||||||||    
T  41163516 tctacgcatgagctggattagtcgtccaccttttgtgggtcggaaactggtgcgaaagc 41163458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42861274 - 42861216
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||| |||| |||||||||    
T  42861274 tctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaagc 42861216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14588673 - 14588616
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||||| |||||||||| | || |||||| ||||||||    
T  14588673 tctacgcatgagccggattagtcgtccacctttggtgagccgaaaaccggtgcgaaag 14588616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 36783296 - 36783352
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||| ||| |||||    
T  36783296 tacgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcaaaagc 36783352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42291561 - 42291505
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||| ||||||||||||||||| ||||||| ||| |||||||||| |||||||    
T  42291561 tctacgcacgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaa 42291505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5731976 - 5731918
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||| ||||||| ||||||||||  |||||| ||||||||||||||| |||||||||    
T  5731976 tctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaagc 5731918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9168309 - 9168251
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| |||||| |||||||| ||| || ||| |||||    
T  9168309 tctacgcatgagccggattagtcgtccacctttagtgggtcgaaaatcggtgcaaaagc 9168251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12766182 - 12766240
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||| || ||||||||| | |||||||||||||| ||||||| |||||||||    
T  12766182 tctacgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtgcgaaagc 12766240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14728134 - 14728192
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||| |   ||||||| |||||||||||||| |||||||||    
T  14728134 tctacgcatgagccggattagttgctcacctttgatgggtcggaaaccggtgcgaaagc 14728192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19572775 - 19572833
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||  ||| ||||||||| |||||||  |||||||||    
T  19572775 tctacgcatgagccggattagtcgttcaccattggtgggttggaaaccagtgcgaaagc 19572833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24653867 - 24653810
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||| |||||||||| ||||| ||| ||||||||||| ||||||||||||||||    
T  24653867 tctacgcat-agccggattaatcgtccaccattggtgggtcgaaaaccgatgcgaaagc 24653810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 40117466 - 40117524
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||| ||||  ||||||||||| ||| |||||| |||||||||    
T  40117466 tctacgcatgagccggattaatcgttcacctttggtggatcgaaaaccggtgcgaaagc 40117524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43399179 - 43399237
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||| |||||||||||| || |||||| |||||||||||| |||||||||    
T  43399179 tctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaagc 43399237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2485247 - 2485304
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||| ||||| |||||||||||   ||||||| |||||||||||||||||||||||    
T  2485247 tctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaaag 2485304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14974380 - 14974343
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgg 38  Q
    |||||||||||||||||||||||||| |||||||||||    
T  14974380 tctacgcatgagccggattagtcgtccacctttggtgg 14974343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24875396 - 24875453
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| ||||||||||| ||||| ||||||| ||||||||||| | |||||||||    
T  24875396 tctacgcacgagccggattaatcgtccacctttgatgggtcggaaatcaatgcgaaag 24875453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15034126 - 15034182
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||||||||| ||||||| ||| ||||||| ||| ||||||||||||| ||||    
T  15034126 tctacgcatgagcctgattagttgtccacctttgatggatcggaaaccgatgtgaaa 15034182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37263291 - 37263347
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||| ||||||||||||||||| ||||||  ||| |||||||||| |||||||    
T  37263291 tctacgcacgagccggattagtcgtccacctttattggatcggaaaccggtgcgaaa 37263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 38296783 - 38296728
Alignment:
Q  4 acgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||| ||| ||||||||||| | ||||||| |||||||||||||||||| |||||    
T  38296783 acgcacgagtcggattagtcgcccacctttgatgggtcggaaaccgatgcaaaagc 38296728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3653970 - 3653912
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||| ||||||||||||| ||||||||||| ||| |||||| ||| |||||    
T  3653970 tctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtgcaaaagc 3653912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5079382 - 5079439
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | ||||||||| ||||| |||||| |||||||||    
T  5079382 tctacgcacgagccggattagtcgcccacctttggt-ggtcgaaaaccggtgcgaaagc 5079439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6764513 - 6764467
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaac 47  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||||    
T  6764513 tctacgcacgagccggattagtcgcctatctttgttgggtcggaaac 6764467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13664311 - 13664369
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||| ||||| |||   |||||||||| ||||||||||| |||||||||    
T  13664311 tctacgcatgagccagattaatcgatcacctttggtgtgtcggaaaccggtgcgaaagc 13664369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14235770 - 14235712
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||| ||||||| ||||||||||  | |||||||||||||| ||||||||||| |||||    
T  14235770 tctaagcatgagtcggattagtcacccacctttggtgggtcagaaaccgatgcaaaagc 14235712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20682673 - 20682615
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||| ||| | |||||| |||||| |||||||| |||||||||    
T  20682673 tctacgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaagc 20682615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 20692999 - 20693041
Alignment:
Q  16 gattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||    
T  20692999 gattagttgtccacctttggtgggtcggaaaccggtgcgaaag 20693041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21375402 - 21375460
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| ||||||||||||| | ||||| ||| |||||||||  |||||||||    
T  21375402 tctacgcatgagtcggattagtcgtccatctttgatggatcggaaaccagtgcgaaagc 21375460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38897775 - 38897717
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||| | | ||||||||||| |||||||||  |||||||||    
T  38897775 tctacgcacgagccggattagttgcccacctttggtggatcggaaaccagtgcgaaagc 38897717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7336671 - 7336708
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgg 38  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  7336671 tctacgcacgagccggattaatcgtctacctttggtgg 7336708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18045690 - 18045746
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||| ||||||||| |||| ||||| |||||| |||| |||||||||||||||||||    
T  18045690 tctacacatgagccg-attaatcgtccacctttagtggatcggaaaccgatgcgaaag 18045746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25417239 - 25417182
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||| | |||||||||||||| | |||| |||||||||| ||||||| ||||||||    
T  25417239 tctacgaacgagccggattagtcatttaccattggtgggtcagaaaccggtgcgaaag 25417182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 40060339 - 40060391
Alignment:
Q  5 cgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||||||||||| ||||| ||| ||| ||||| |||||||| |||||||    
T  40060339 cgcatgagccggattaatcgtccaccattgatgggttggaaaccggtgcgaaa 40060391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29127969 - 29128027
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  29127969 tctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaagc 29128027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 47471881 - 47471938
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  47471881 tctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccgatgcgaaag 47471938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 47219194 - 47219252
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||    
T  47219194 tctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaagc 47219252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 49021260 - 49021202
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  49021260 tctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 49021202  T

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Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3136751 - 3136693
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||| |||||||||    
T  3136751 tctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaaagc 3136693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 28572268 - 28572210
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  28572268 tctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 28572210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 8683291 - 8683242
Alignment:
Q  7 catgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaa 56  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  8683291 catgagccggattagtcgtccacctttggtgggtcggaaacctatgcgaa 8683242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35316006 - 35316063
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||||||| |||||||||| | || ||||||||||||||||||||||||||||    
T  35316006 tctacgcatgagctggattagtcgcccacttttggtgggtcggaaaccgatgcgaaag 35316063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 36043730 - 36043673
Alignment:
Q  2 ctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  36043730 ctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 36043673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 54261276 - 54261333
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||||| ||||||||    
T  54261276 tctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 54261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 7328895 - 7328951
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||| |||||||||    
T  7328895 tacgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaagc 7328951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7310760 - 7310702
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||||||||||||||   | ||||||||||||||||||||||||||||||    
T  7310760 tctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaagc 7310702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7650277 - 7650335
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  7650277 tctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaagc 7650335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15320236 - 15320294
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | |||||||||||||| ||||||| |||||||||    
T  15320236 tctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagc 15320294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25295010 - 25295068
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||| ||||||||||||||||||||| ||| ||||||||| |||||||| |||||||||    
T  25295010 tctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaaagc 25295068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 45402408 - 45402350
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||| |||||| ||||    
T  45402408 tctacgcatgagccggattagtcgttcacctttagtgggtcggaaactgatgcgcaagc 45402350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47749162 - 47749104
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||||| |||||||| | ||||||||| ||||||||||||||||||||||    
T  47749162 tctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaagc 47749104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51060338 - 51060280
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||| | |||||||||||| ||| |||||||||||||||||| |||||||||    
T  51060338 tctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 51060280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 54237498 - 54237556
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||| ||||||| ||| || ||||||||||||||| |||||||||    
T  54237498 tctacgcatgagccggataagtcgtccaccattagtgggtcggaaaccggtgcgaaagc 54237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19147011 - 19147068
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||| ||| |||| |||||||||||| |||||||||||||||||||||| ||||||||    
T  19147011 tctatgcacgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 19147068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29762212 - 29762155
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||| |||||||| |||||||||||| ||| |||||||||||||||||| ||||||||    
T  29762212 tctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 29762155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45877504 - 45877561
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||||  ||| ||| |||||||||||||| ||||||||    
T  45877504 tctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaaag 45877561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3507590 - 3507534
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||| |||||||||||||||   |||||||||||||||||||||| |||||||    
T  3507590 tctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49198401 - 49198457
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||||||||||||||||||||| ||| ||||||| || |||||||||| ||||    
T  49198401 tctacgcatgagccggattagtcgtccaccattggtggatcagaaaccgatgtgaaa 49198457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 53649777 - 53649833
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||||||||||||||||||||  ||||||| ||| |||||||||| |||||||    
T  53649777 tctacgcatgagccggattagtcgttcacctttgatggatcggaaaccggtgcgaaa 53649833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 3755620 - 3755655
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggt 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  3755620 tctacgcatgagccggattagtcgtctacctttggt 3755655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 54448326 - 54448365
Alignment:
Q  18 ttagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  54448326 ttagtcgtctacctttggtgggtcgaaaaccgatgcgaaa 54448365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 11393526 - 11393476
Alignment:
Q  7 catgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||| ||||||||||| ||||||| | ||||||||||||||||||||    
T  11393526 catgagccagattagtcgtccacctttgattggtcggaaaccgatgcgaaa 11393476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23511617 - 23511675
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| ||||||| ||||| ||||||| ||||||| |||||| |||||||||    
T  23511617 tctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgcgaaagc 23511675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29135963 - 29136021
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||| || ||| ||||||||| |||||||| | |||||||    
T  29135963 tctacgcatgagccggattagtcttccaccattggtgggttggaaaccggtacgaaagc 29136021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30767304 - 30767258
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaac 47  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||    
T  30767304 tctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 30767258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44064594 - 44064652
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||||| ||| |||||    
T  44064594 tctacgcatgaaccggattagtcgctcacctttggtgggtcggaaaccggtgcaaaagc 44064652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22909833 - 22909890
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||||||||| |||||||||  ||||||| |||||||||||||  ||||||||    
T  22909833 tctacgcatgagccgaattagtcgtgcacctttgatgggtcggaaaccagtgcgaaag 22909890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34662376 - 34662320
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||| |||||||||| |||||||||| |||||| |||| | ||||||||||||||||    
T  34662376 tctatgcatgagccgaattagtcgtccacctttagtggattggaaaccgatgcgaaa 34662320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4638204 - 4638259
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaa 56  Q
    |||||||| ||||||||||||| | | ||||||  |||||||||||||||||||||    
T  4638204 tctacgcacgagccggattagtagcccacctttaatgggtcggaaaccgatgcgaa 4638259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 13367476 - 13367531
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||  ||||| ||| ||||| |||||||| ||||||||    
T  13367476 tacgcatgagccggattagtcacctaccgttgttgggtaggaaaccggtgcgaaag 13367531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7648790 - 7648848
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | ||||||| ||||||| || || ||||||||||    
T  7648790 tctacgcacgagccggattagtcgcccacctttgttgggtcgaaatccaatgcgaaagc 7648848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13893976 - 13894034
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||| || ||||||||||||||| | ||||||||||| ||| |||||| |||||||||    
T  13893976 tctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgcgaaagc 13894034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19873422 - 19873468
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaac 47  Q
    |||||||| ||||||||||||||||| | |||| |||||||||||||    
T  19873422 tctacgcacgagccggattagtcgtccatcttttgtgggtcggaaac 19873468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26043862 - 26043920
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||||   |||||||||| ||| |||||||  ||||||||    
T  26043862 tctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccggggcgaaagc 26043920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26362024 - 26361966
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||||||||||||||   ||||||| |||||||||||||| || ||||||    
T  26362024 tctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaagc 26361966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33251712 - 33251758
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaac 47  Q
    |||||||||||||||||||||||||| || |||| ||||||| ||||    
T  33251712 tctacgcatgagccggattagtcgtccacatttgatgggtcgaaaac 33251758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41630569 - 41630523
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaac 47  Q
    ||||| |||||||||||||||||| | ||||||||| ||||||||||    
T  41630569 tctacacatgagccggattagtcgcccacctttggttggtcggaaac 41630523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43330789 - 43330731
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | ||||||||||||||  |||||| | |||||||    
T  43330789 tctacgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtacgaaagc 43330731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 48342070 - 48342128
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||| || ||||||||||| | ||||||||| |||||||| | |||||||||    
T  48342070 tctacgcatgaaccagattagtcgtccatctttggtggatcggaaacaggtgcgaaagc 48342128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 55069736 - 55069678
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||| |||   |||||||||||||||||||||| ||| |||||    
T  55069736 tctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtgcaaaagc 55069678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 928651 - 928708
Alignment:
Q  2 ctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||| |||||||||||||| || |||||||||| |||| ||| || |||||||||    
T  928651 ctacgcacgagccggattagtcatccacctttggtgagtcgaaaatcggtgcgaaagc 928708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10040606 - 10040659
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcg 54  Q
    |||||||| |||||||| | |||||| ||||||||||||| |||||||| ||||    
T  10040606 tctacgcacgagccggaatggtcgtccacctttggtgggttggaaaccggtgcg 10040659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 32522031 - 32522076
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaacc 48  Q
    |||||||||| | ||||||||||| ||||||| |||||||||||||    
T  32522031 tacgcatgagtcagattagtcgtccacctttgatgggtcggaaacc 32522076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50405660 - 50405612
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 49  Q
    |||||||| ||| ||||||||||| | ||| ||||||||||||||||||    
T  50405660 tctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccg 50405612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 52364857 - 52364813
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaa 45  Q
    |||||||| |||| |||||| ||||||||||||| ||||||||||    
T  52364857 tctacgcacgagctggattaatcgtctacctttgatgggtcggaa 52364813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14169665 - 14169608
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  14169665 tctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25540460 - 25540402
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  25540460 tctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 25540402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3643943 - 3643885
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||||||| |||||||||    
T  3643943 tctacgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaaagc 3643885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3811747 - 3811689
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||| ||| | |||||||||||||| |||||||||||||||||    
T  3811747 tctacgcatgagccggattactcgcccacctttggtgggtcagaaaccgatgcgaaagc 3811689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7747324 - 7747382
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||    
T  7747324 tctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagc 7747382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16325645 - 16325703
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||||||| |||||||||    
T  16325645 tctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 16325703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20116668 - 20116610
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||| |||||||||    
T  20116668 tctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaagc 20116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22593184 - 22593241
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  22593184 tctacgcatgagccggattagtcgtccacctttggtgggtcgg-aaccggtgcgaaagc 22593241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39201564 - 39201516
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  39201564 tctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccg 39201516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10026672 - 10026626
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaac 47  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||    
T  10026672 tctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10046533 - 10046487
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaac 47  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||    
T  10046533 tctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10823110 - 10823168
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | |||||| ||||||||||||||| |||||||||    
T  10823110 tctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccggtgcgaaagc 10823168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11069928 - 11069986
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||| | |||||||||| ||| ||||||||||||||||||||||||||||    
T  11069928 tctacgcacgagctgaattagtcgtccaccgttggtgggtcggaaaccgatgcgaaagc 11069986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18902586 - 18902528
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||| ||||||||| | |||||||||||||||||||||| |||||||||    
T  18902586 tctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 18902528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41220685 - 41220743
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||| |||||||||  |||||| ||||||||||||||| |||||||||    
T  41220685 tctacgcatgagccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaagc 41220743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6358207 - 6358150
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||| || |||||    
T  6358207 tctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtgtgaaag 6358150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 12864278 - 12864331
Alignment:
Q  5 cgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||    
T  12864278 cgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 12864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35946788 - 35946845
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||||| | ||||||||    
T  35946788 tctacgcacgagccggattagtcgtccaccattggtgggtcggaaactggtgcgaaag 35946845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38962813 - 38962870
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||||| |||||||||||||| |||||||||||||| ||||| | ||||||||    
T  38962813 tctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaaag 38962870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 331551 - 331598
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaacc 48  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||    
T  331551 tctacgcatgagccggattagtcgcccacctttggtgggttggaaacc 331598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8410181 - 8410239
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | || ||||| ||||||||||||| |||||||||    
T  8410181 tctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaagc 8410239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12455360 - 12455418
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||||||||||||||   ||| |||||||||||||||||| |||||||||    
T  12455360 tctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaagc 12455418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26805346 - 26805404
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| ||||||||||| | ||||||||||| ||| |||||||||| |||||    
T  26805346 tctacgcatgagtcggattagtcgcccacctttggtggctcgaaaaccgatgcaaaagc 26805404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34130358 - 34130300
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||| ||||||||||||||| ||||| | ||||||| || |||||||||    
T  34130358 tctacgcatgagccagattagtcgtctaccattggtagatcggaaatcggtgcgaaagc 34130300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38005452 - 38005510
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||| | |||||||||    
T  38005452 tctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaagc 38005510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41031962 - 41031904
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||  | |||||||||||||||||||||  |||||||||    
T  41031962 tctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaaagc 41031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 42770703 - 42770649
Alignment:
Q  5 cgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||| ||||||||||| ||||| ||||||||||||||| |||||||||| |||||    
T  42770703 cgcacgagccggattaatcgtccacctttggtgggtcgaaaaccgatgcaaaagc 42770649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44139534 - 44139592
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | |||  ||||||||||||||||| |||||||||    
T  44139534 tctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaagc 44139592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44945643 - 44945701
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | |||||| |||| |||||||||| |||||||||    
T  44945643 tctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaagc 44945701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 792208 - 792261
Alignment:
Q  5 cgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||| | | |||||||||||||||||||| ||| ||||    
T  792208 cgcatgagccggattagtcgcccatctttggtgggtcggaaaccggtgcaaaag 792261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2550918 - 2550975
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||| | || |||||||||| | |||||| ||||||||    
T  2550918 tctacgcatgagccggattagtcgcccacttttggtgggttgaaaaccggtgcgaaag 2550975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20612591 - 20612534
Alignment:
Q  1 tctacgcatgagccgg-attagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||| ||||||||||| |||||||||| ||| |||||||||||||||||| |||||||    
T  20612591 tctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1773700 - 1773644
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    ||||||||||||  |||||||||||| ||| ||||||||||| |||||| |||||||    
T  1773700 tctacgcatgagttggattagtcgtccaccattggtgggtcgaaaaccggtgcgaaa 1773644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 29422267 - 29422323
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||| ||||||||||||||||| ||||||| ||| ||||||| || |||||||||    
T  29422267 tacgcacgagccggattagtcgtccacctttgatggatcggaaatcggtgcgaaagc 29422323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 44023347 - 44023403
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||| || |||||||||| | ||||||||||| |||||||| |||||||||    
T  44023347 tacgcatgagtcgaattagtcgtccatctttggtgggttggaaaccggtgcgaaagc 44023403  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24179618 - 24179657
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggt 40  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  24179618 tctacgcatgagccggattagtcgtccatctttggtgggt 24179657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13026467 - 13026409
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||  | || |||||| |||| ||||||||||| |||||    
T  13026467 tctacgcatgagccggattagtcagccacttttggtaggtcagaaaccgatgcaaaagc 13026409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34346343 - 34346285
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| | ||||| |||   |||||||||||||||||||||| |||||||||    
T  34346343 tctacgcatgagtcagattaatcgctcacctttggtgggtcggaaaccggtgcgaaagc 34346285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34722730 - 34722788
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | ||||||| ||| || ||||||| |||||||||    
T  34722730 tctacgcacgagccggattagtcgcccacctttgatggatcagaaaccggtgcgaaagc 34722788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37560223 - 37560281
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||| ||||| ||||||| ||||||| |||||| || ||||||    
T  37560223 tctacgcacgagccggattaatcgtccacctttgatgggtcgaaaaccggtgtgaaagc 37560281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18649082 - 18649025
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||| |||||||||||   || |||||||||| |||||||| ||||||||    
T  18649082 tctacgcatgagtcggattagtcgctcacttttggtgggttggaaaccgttgcgaaag 18649025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33005801 - 33005858
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||| | ||||| |||   |||||| ||||||||||||||||||||||||    
T  33005801 tctacgcatgaggcagattaatcgctcacctttagtgggtcggaaaccgatgcgaaag 33005858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 44773321 - 44773370
Alignment:
Q  9 tgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||||||||||   ||||||| |||||||||||||| ||||||||    
T  44773321 tgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaag 44773370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10669642 - 10669690
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 49  Q
    |||||||| ||| ||||||| ||||  ||||||||||||||||||||||    
T  10669642 tctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccg 10669690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21642000 - 21642056
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    ||||||||||||||| |||| ||| |  |||||||||||||| |||||| |||||||    
T  21642000 tctacgcatgagccgaattaatcgcccgcctttggtgggtcgaaaaccggtgcgaaa 21642056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 44548774 - 44548722
Alignment:
Q  7 catgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||| ||||||| ||| |||||||| | |||||||||    
T  44548774 catgagccagattagtcgtccacctttgatggatcggaaactggtgcgaaagc 44548722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 3e-19; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6032699 - 6032643
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6032699 tctacgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 6032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40780917 - 40780861
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  40780917 tctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7246702 - 7246645
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  7246702 tctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8889077 - 8889125
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 49  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8889077 tctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccg 8889125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4738673 - 4738731
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||| |||||||||    
T  4738673 tctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 4738731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16450355 - 16450413
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||| |||||||||    
T  16450355 tctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaagc 16450413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38075488 - 38075546
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||| |||| | ||| ||||||||||||||||||||||||||||||||    
T  38075488 tctacgcatgagccgaattaattgtccacctttggtgggtcggaaaccgatgcgaaagc 38075546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38166082 - 38166140
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  38166082 tctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 38166140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 52950137 - 52950195
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||||    
T  52950137 tctacacatgaaccagattagtcgtccacctttggtgggtcggaaaccgatgcgaaagc 52950195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29895842 - 29895899
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||||    
T  29895842 tctacgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgcgaaag 29895899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13073593 - 13073649
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||| |||||||    
T  13073593 tctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaaa 13073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 48834750 - 48834698
Alignment:
Q  7 catgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||| ||||||||||| |||||||||||||||||||||||| |||||||||    
T  48834750 catgagtcggattagtcgcctacctttggtgggtcggaaaccggtgcgaaagc 48834698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6779266 - 6779324
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||| ||||||||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  6779266 tctatgcatgagccggattagtcgtccacctttggtgaatcggaacccgatgcgaaagc 6779324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38168311 - 38168369
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||  |||||| |||||| |||||||| |||||||||    
T  38168311 tctacgcatgagccggattagtcgttcacctttagtgggttggaaaccggtgcgaaagc 38168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47682438 - 47682380
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||| ||||||| | |||||||||||||||||||||| |||||||||    
T  47682438 tctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 47682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2559362 - 2559419
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||  |||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  2559362 tctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaaag 2559419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30317288 - 30317345
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| |||||| |||||||| | ||||||||||||||||||||||||| |||||    
T  30317288 tctacgcacgagccgaattagtcgcccacctttggtgggtcggaaaccgatgtgaaag 30317345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31588741 - 31588798
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||||||||||||||||||   || |||||||| |||||||||||||||||||    
T  31588741 tctacgcatgagccggattagtcgctcacttttggtggatcggaaaccgatgcgaaag 31588798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42722633 - 42722576
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||||  |||||| |||||||| |||||| ||||||||    
T  42722633 tctacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccggtgcgaaag 42722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 46108746 - 46108798
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgc 53  Q
    |||||||||||||| ||||||||||| || |||| ||||||||||||||||||    
T  46108746 tctacgcatgagccagattagtcgtccacttttgatgggtcggaaaccgatgc 46108798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1940833 - 1940779
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcga 55  Q
    |||||||| ||||||||||||||| | ||||||||||||||| |||||| |||||    
T  1940833 tctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5472904 - 5472846
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | ||||||||||||||| |||| | |||||||||    
T  5472904 tctacgcacgagccggattagtcgcccacctttggtgggtcgaaaactggtgcgaaagc 5472846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29588791 - 29588849
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||||||||||||  || ||| ||||||||||||||| ||||||||||||    
T  29588791 tctacgcacgagccggattagttatccaccattggtgggtcggaaatcgatgcgaaagc 29588849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36145271 - 36145213
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||| |||||||||||||||||||| ||||||| ||  |||||||||| |||||||||    
T  36145271 tctacacatgagccggattagtcgtccacctttgatgaatcggaaaccggtgcgaaagc 36145213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36262823 - 36262765
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||| ||||||||||| | |||||||||||||| |||||| ||||||||||    
T  36262823 tctacgcacgagtcggattagtcgcccacctttggtgggtcagaaaccaatgcgaaagc 36262765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38841424 - 38841366
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| ||||||||||||| | ||||||| | ||||||| ||||||||||||    
T  38841424 tctacgcatgagtcggattagtcgtccatctttggtagttcggaaatcgatgcgaaagc 38841366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 49260721 - 49260663
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||| || ||| |||||    
T  49260721 tctacgcacgagccggattagtcgaccacctttggtgggtcggaaatcggtgcaaaagc 49260663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 50485998 - 50486056
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | ||| || ||||||||||||||||||| |||||    
T  50485998 tctacgcacgagccggattagtcgcccaccattagtgggtcggaaaccgatgcaaaagc 50486056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 53599115 - 53599173
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||| ||||  |||||| |||| |||||||||| |||||||||    
T  53599115 tctacgcatgagccggattaatcgttcacctttagtggatcggaaaccggtgcgaaagc 53599173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 55921089 - 55921147
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||| ||||||||||||| |||   |||||||||||||||||||||| |||||||||    
T  55921089 tctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaaagc 55921147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43458668 - 43458725
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||| | ||||||||||||||||| ||||||| || ||||||||||| ||||||||    
T  43458668 tctacggacgagccggattagtcgtccacctttgatgagtcggaaaccgttgcgaaag 43458725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43468402 - 43468459
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||| | |||  |||||||||||| |||| ||||||||    
T  43468402 tctacgcatgagccggattagtcgcccaccagtggtgggtcggagaccggtgcgaaag 43468459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 54946304 - 54946352
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 49  Q
    |||||||||||||||||||||||| | | | ||||||||||||||||||    
T  54946304 tctacgcatgagccggattagtcgcccatcattggtgggtcggaaaccg 54946352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21429356 - 21429411
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaa 56  Q
    |||||||| ||| | || |||||||| |||||||||||||||||||||| ||||||    
T  21429356 tctacgcacgagtcagactagtcgtccacctttggtgggtcggaaaccggtgcgaa 21429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3507325 - 3507371
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaac 47  Q
    ||||| || ||||||||||||||||| ||||||||||| ||||||||    
T  3507325 tctacacacgagccggattagtcgtccacctttggtggatcggaaac 3507371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16645173 - 16645231
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||| |||||| | ||||||||| | |||| ||||||||||||||||| |||||||||    
T  16645173 tctacacatgagtctgattagtcgcccacctgtggtgggtcggaaaccggtgcgaaagc 16645231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17080098 - 17080156
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||||   ||||||| ||| ||| |||||| |||||||||    
T  17080098 tctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaaagc 17080156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25406619 - 25406561
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||  | ||||||||||  ||||||| |||||||||||||| |||||||||    
T  25406619 tctacgcatgaatcagattagtcgttcacctttgatgggtcggaaaccggtgcgaaagc 25406561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 26237476 - 26237422
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||||| ||||||||| ||| ||| ||| |||||||||||| |||||||||    
T  26237476 tacgcatgagtcggattagtagtccaccattgatgggtcggaaactgatgcgaaa 26237422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 27531722 - 27531668
Alignment:
Q  5 cgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||| |||||||| |||||||||||||||||| ||| || ||||||    
T  27531722 cgcatgagtcggaatagtcgtccacctttggtgggtcggaagccggtgtgaaagc 27531668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 47078513 - 47078571
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||||||||||||||   ||| |||||||||||||||||  |||||||||    
T  47078513 tctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaaagc 47078571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49952202 - 49952144
Alignment:
Q  1 tctacgcatgagccggattagtcgtct-acctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||||||||||||||||||  | ||||||| ||||| |||||||| ||||||||    
T  49952202 tctacgcatgagccggattagtcgcgtcacctttgatgggttggaaaccggtgcgaaag 49952144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 4986261 - 4986306
Alignment:
Q  14 cggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||| |||||| ||||| | |||||||||    
T  4986261 cggattagtcgtctacctttgatgggtcagaaactggtgcgaaagc 4986306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14567294 - 14567351
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| |||||||||||||||    |||||||||||||||||| || ||||||||    
T  14567294 tctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaag 14567351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15829754 - 15829811
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||| |||||||||||||||||| || ||| ||||||| || ||||||| ||||||||    
T  15829754 tctaggcatgagccggattagtcctccaccattggtggatcagaaaccggtgcgaaag 15829811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20532465 - 20532420
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaa 46  Q
    |||||||||||||||||| ||||| | ||||||||||| |||||||    
T  20532465 tctacgcatgagccggataagtcgcccacctttggtggatcggaaa 20532420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 20128366 - 20128422
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||| ||||  ||||||||||| ||| |||||||||| ||||||| |||||||||    
T  20128366 tacgcacgagctagattagtcgtccaccattggtgggtcagaaaccggtgcgaaagc 20128422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10927660 - 10927718
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  10927660 tctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccgatgcgaaagc 10927718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43027359 - 43027417
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||    
T  43027359 tctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaagc 43027417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4479352 - 4479296
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||    
T  4479352 tctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26570978 - 26571036
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||||||| ||||||    
T  26570978 tctacgcatgagccggattagtcgtccacctttgatgagtcggaaaccgatgtgaaagc 26571036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15884612 - 15884556
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||    
T  15884612 tctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8141156 - 8141214
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| | |||||||||| || ||||||||||| |||||||||||||||||    
T  8141156 tctacgcatgagctgaattagtcgtccacatttggtgggtcagaaaccgatgcgaaagc 8141214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 45521222 - 45521280
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||||   ||||||| |||||||||||||| |||||||||    
T  45521222 tctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaagc 45521280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 6100527 - 6100584
Alignment:
Q  2 ctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||||  |||||| |||||||| |||||| |||||||||    
T  6100527 ctacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccgctgcgaaagc 6100584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18374064 - 18374121
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||||| | ||||||||||||| |||||| ||| ||||    
T  18374064 tctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtgcaaaag 18374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 8997598 - 8997542
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| ||||||||||  | |||||||||||||||||||| |||||||||    
T  8997598 tacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaagc 8997542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2467174 - 2467116
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||| ||||||||||||||||||||| ||  |||||| ||||||||||| |||||||||    
T  2467174 tctatgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaagc 2467116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2964130 - 2964188
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| || |||||||||||| | |||||||||||||| ||||||| |||||||||    
T  2964130 tctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagc 2964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3418569 - 3418511
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| | ||||||||||| |||||| ||||||| ||||||| |||||||||    
T  3418569 tctacgcatgagtcagattagtcgtccacctttagtgggtcagaaaccggtgcgaaagc 3418511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8803108 - 8803166
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | | |  |||||||||||||||||||||||||||    
T  8803108 tctacgcacgagccggattagtcgcccatcaatggtgggtcggaaaccgatgcgaaagc 8803166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9860051 - 9859993
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||| |||||||| ||||||||||| ||| ||||||| |||||||||||||| |||||    
T  9860051 tctacacatgagccagattagtcgtccaccattggtggatcggaaaccgatgcaaaagc 9859993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14846629 - 14846687
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| | ||| ||||||| ||||||||||||||||||| || |||||||||    
T  14846629 tctacgcatgagtcagataagtcgtccacctttggtgggtcggaaatcggtgcgaaagc 14846687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43032955 - 43033013
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||| || ||||||||||||||| | |||||||||||||| ||||||| |||||||||    
T  43032955 tctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagc 43033013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 4772094 - 4772049
Alignment:
Q  14 cggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||    
T  4772094 cggattagtcgtccacctttggtgggtcggaaaccggtgcgtaagc 4772049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3379868 - 3379812
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||| || |||||||    
T  3379868 tctatgcatgagtcggattagtcgtccacttttggtgggtcggaaatcggtgcgaaa 3379812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3567958 - 3568005
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaacc 48  Q
    ||||||||||||||  ||||||| || |||||||||||||||||||||    
T  3567958 tctacgcatgagccaaattagtcatccacctttggtgggtcggaaacc 3568005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24837296 - 24837354
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||| ||| |||| |||||||||||| ||||||||||| |||||||| | |||||||||    
T  24837296 tctaagcacgagcaggattagtcgtccacctttggtggatcggaaactggtgcgaaagc 24837354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 27975945 - 27976003
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||| |||||||||||| ||| | |||||| ||||||| | |||||||||||||||    
T  27975945 tctacgcttgagccggattaatcgcccacctttagtgggtcaggaaccgatgcgaaagc 27976003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28033214 - 28033272
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||| |||||||||||| ||| | |||||| ||||||| | |||||||||||||||    
T  28033214 tctacgcttgagccggattaatcgcccacctttagtgggtcaggaaccgatgcgaaagc 28033272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36662458 - 36662515
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||| |||| |||||||||||||| || |||  ||| |||||||||||||||||||    
T  36662458 tctacgtatgaaccggattagtcgtccacttttaatggatcggaaaccgatgcgaaag 36662515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13358012 - 13357964
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 49  Q
    |||| ||| |||||||||||||||||  ||||| |||||||||||||||    
T  13358012 tctatgcacgagccggattagtcgtccccctttagtgggtcggaaaccg 13357964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 16893993 - 16894047
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||| |||| | ||||||||||| |||||||||| |||||||||    
T  16893993 tacgcatgagccggatt-gtcgcccacctttggtgg-tcggaaaccggtgcgaaagc 16894047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24938618 - 24938570
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 49  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||||||    
T  24938618 tctacgcatgaaccggattagtcatccacctttgatggatcggaaaccg 24938570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 5e-18; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 28396214 - 28396168
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28396214 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 28396168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 48804736 - 48804794
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  48804736 tctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 48804794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38578923 - 38578866
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  38578923 tctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 38578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24983475 - 24983416
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtc-ggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  24983475 tctacgcatgagccggattagtcgtccaccattggtgggtctggaaaccgatgcgaaagc 24983416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4195258 - 4195200
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||| |||| ||| ||||||||| ||||||||||||||||||    
T  4195258 tctacgcatgagccggattagccgtccaccattggtgggttggaaaccgatgcgaaagc 4195200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5069871 - 5069813
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||  |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  5069871 tctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaagc 5069813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17748438 - 17748380
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  17748438 tctacgtacgagccggattagtcgtccacctttgttgggtcggaaaccgatgcgaaagc 17748380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 39420890 - 39420948
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| ||| |||||    
T  39420890 tctacgcatgagccggattagtcgtctacctttgatgggccggaaaccggtgcaaaagc 39420948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10047932 - 10047874
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| | |||||||||| ||| |||||||||||||||||| |||||||||    
T  10047932 tctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 10047874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13095911 - 13095969
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||| ||| |||||    
T  13095911 tctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcaaaagc 13095969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22974020 - 22974078
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||  ||||||||    
T  22974020 tctacgcatgagccagattagtcgtccacctttggtgggtcagaaaccggcgcgaaagc 22974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 39474993 - 39475051
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||  |||||||||    
T  39474993 tctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccagtgcgaaagc 39475051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42032149 - 42032207
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||| |||||| ||| ||||||| |||||||||||||||||| |||||    
T  42032149 tctacgcatgagccgaattagttgtccacctttgatgggtcggaaaccgatgctaaagc 42032207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 48551910 - 48551968
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||| ||||||||||||||||||| ||||||| ||| |||||||||| |||||||||    
T  48551910 tctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaagc 48551968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 28744224 - 28744273
Alignment:
Q  10 gagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||| |||||||||||||||||||| | |||||||||    
T  28744224 gagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaagc 28744273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41945526 - 41945583
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||| || ||||||||    
T  41945526 tctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaag 41945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 8734739 - 8734684
Alignment:
Q  4 acgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||| ||||| ||||||||| | |||||||||||||||||||||| |||||||||    
T  8734739 acgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 8734684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 1606002 - 1606052
Alignment:
Q  9 tgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||| | ||||||||||| |||||||||| |||||||||    
T  1606002 tgagccggattagtcgcccacctttggtggatcggaaaccggtgcgaaagc 1606052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 29152005 - 29152051
Alignment:
Q  13 ccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  29152005 ccggattaatcgtctaccattgatgggtcggaaaccgatgcgaaagc 29152051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42210318 - 42210260
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||| ||  | ||| ||||||||||||||||||||||||||||    
T  42210318 tctacgcacgagccggattaatcacccaccgttggtgggtcggaaaccgatgcgaaagc 42210260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43862028 - 43861970
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||| |  ||||||||||| ||| |||||| |||||||||    
T  43862028 tctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcgaaagc 43861970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 48244412 - 48244354
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||||   ||||||||||| ||| |||||| |||||||||    
T  48244412 tctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtgcgaaagc 48244354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3353477 - 3353534
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| ||||||||||||||||| ||||||| ||| || ||||||| ||||||||    
T  3353477 tctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgcgaaag 3353534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27028332 - 27028389
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||| ||||||| ||||||||||   |||||||||||||||||||||| ||||||||    
T  27028332 tctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 27028389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27875144 - 27875088
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||||||| || |||||||||| |||||| |||||||| |||||| |||||||    
T  27875144 tctacgcatgagtcgcattagtcgtccacctttagtgggtcgaaaaccggtgcgaaa 27875088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36619310 - 36619270
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtc 41  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  36619310 tctacgcatgagccggattagtcgtccaccattggtgggtc 36619270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18785722 - 18785777
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaa 56  Q
    ||||||||||| | |||||||||||  |||| ||||||||||||||||| ||||||    
T  18785722 tctacgcatgaactggattagtcgttcacctctggtgggtcggaaaccggtgcgaa 18785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 34127698 - 34127643
Alignment:
Q  4 acgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||| ||||||||||||||| | ||||||||||||||  |||||| |||||||||    
T  34127698 acgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtgcgaaagc 34127643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41267980 - 41267929
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatg 52  Q
    ||||||||||||   ||||||||||| ||||||| |||||||||||||||||    
T  41267980 tctacgcatgagttagattagtcgtccacctttgatgggtcggaaaccgatg 41267929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 45697246 - 45697199
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaacc 48  Q
    ||||||||||||  || ||||||||| |||||||||||||||||||||    
T  45697246 tctacgcatgagttgggttagtcgtccacctttggtgggtcggaaacc 45697199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14650370 - 14650428
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||| |||||||   ||||||||||||| | |||||| |||||||||    
T  14650370 tctacgcatgagccgggttagtcgctcacctttggtgggttgaaaaccggtgcgaaagc 14650428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22993423 - 22993365
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| || ||||||||||||   |||||||||||||| ||||||| |||||||||    
T  22993423 tctacgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaagc 22993365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32768990 - 32769048
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||| ||||||||||||  ||||||||||| |||||||||| || ||||||    
T  32768990 tctacgcacgagtcggattagtcgttcacctttggtggatcggaaaccggtgtgaaagc 32769048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34659279 - 34659337
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | ||| |||||| |||| |||||| |||||||||    
T  34659279 tctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaagc 34659337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43925565 - 43925623
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| |||||||| || |||||||| ||| || |||||||||| ||||||    
T  43925565 tctacgcatgagctggattagttgtttacctttgatggatcagaaaccgatgtgaaagc 43925623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3603410 - 3603467
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| ||||||||||| ||||  || |||||||||||||||| || ||||||||    
T  3603410 tctacgcacgagccggattaatcgttcacttttggtgggtcggaaatcggtgcgaaag 3603467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4706040 - 4705983
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| |||| |||||||||||| ||||||||| | ||| ||||||||| |||||    
T  4706040 tctacgcacgagctggattagtcgtccacctttggtagatcgaaaaccgatgtgaaag 4705983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29805496 - 29805439
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||||||||  |||| |||||||||||| ||| ||||||||||  ||||||||    
T  29805496 tctacgcatgagccaaattaatcgtctacctttagtgagtcggaaaccagtgcgaaag 29805439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30827345 - 30827378
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttg 34  Q
    |||||||| |||||||||||||||||||||||||    
T  30827345 tctacgcacgagccggattagtcgtctacctttg 30827378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5039474 - 5039426
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 49  Q
    ||||||||||||||||||||||||   ||||||||||| ||| ||||||    
T  5039474 tctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccg 5039426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26423343 - 26423288
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    |||||||| ||||| ||||||||||  ||||||||| |||||||||||| |||||||    
T  26423343 tctacgcacgagccagattagtcgttcacctttggt-ggtcggaaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 5e-18; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26325863 - 26325921
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  26325863 tctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 26325921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 9659234 - 9659178
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  9659234 tacgcatgagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaagc 9659178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4581739 - 4581681
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  4581739 tctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 4581681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5855573 - 5855631
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| ||||||||||||  |||||| |||||||||||||||||||||||||    
T  5855573 tctacgcatgaggcggattagtcgttcacctttagtgggtcggaaaccgatgcgaaagc 5855631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8764042 - 8764100
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  8764042 tctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaagc 8764100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10173028 - 10172970
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||    
T  10173028 tctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaagc 10172970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10422839 - 10422897
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||    
T  10422839 tctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaagc 10422897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11397946 - 11397888
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| || |||||||||    
T  11397946 tctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaagc 11397888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17642061 - 17642003
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||| | |||||||||    
T  17642061 tctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaagc 17642003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26660189 - 26660246
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  26660189 tctacgcatgagccggattagtcgcc-acctttggtgggtcggaaaccggtgcgaaagc 26660246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41663913 - 41663855
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||||| |||||||||    
T  41663913 tctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 41663855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 51437512 - 51437566
Alignment:
Q  5 cgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||| || |||||||||||||||||||||| |||||||||    
T  51437512 cgcatgagccggattagtcatccacctttggtgggtcggaaaccggtgcgaaagc 51437566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5504082 - 5504139
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| | ||||||    
T  5504082 tctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtacgaaag 5504139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32922 - 32980
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||| ||||||||||||| |||| ||| |||||||||||| |||||||    
T  32922 tctacgcatgagccgaattagtcgtctacttttgatggatcggaaaccgatacgaaagc 32980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10507749 - 10507807
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||| || |||||||    
T  10507749 tctacgcatgagccggattagtcgtccaccactggtgggtcggaaaccaattcgaaagc 10507807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30927784 - 30927726
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| || ||||||||||| ||||||| ||| |||||    
T  30927784 tctacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgcaaaagc 30927726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34697386 - 34697444
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||| | || |||| ||||| ||||||||||||||||||    
T  34697386 tctacgcatgagccggattagtcgcccacttttgatgggttggaaaccgatgcgaaagc 34697444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 35211229 - 35211171
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||| || ||||||    
T  35211229 tctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgtgaaagc 35211171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 49078165 - 49078223
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||  ||| ||||| |||||||||||| |||||||||    
T  49078165 tctacgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgcgaaagc 49078223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 14254323 - 14254278
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaacc 48  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  14254323 tacgcatgagccggattagtcgtccacctttgatgggtcggaaacc 14254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 45361938 - 45361881
Alignment:
Q  2 ctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||||||||||||||  |||||| ||||||||||||||| |||||||||    
T  45361938 ctacgcataagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagc 45361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 32142901 - 32142845
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| ||||||||   ||||||| ||||||||||||||||||||||||    
T  32142901 tacgcatgagccgaattagtcgctcacctttgatgggtcggaaaccgatgcgaaagc 32142845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 37339874 - 37339929
Alignment:
Q  4 acgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||| ||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  37339874 acgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaagc 37339929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 892355 - 892301
Alignment:
Q  5 cgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||| | ||||||||||| ||||||| || |||||||||    
T  892355 cgcatgagccggattagtcgcccacctttggtggatcggaaatcggtgcgaaagc 892301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43959878 - 43959820
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | |||||| |||| |||||||||| |||||||||    
T  43959878 tctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaagc 43959820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 50094955 - 50095013
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||| ||||||||||||| ||| || ||||||||||||||| ||| |||||    
T  50094955 tctacgcatgagtcggattagtcgtccaccattagtgggtcggaaaccggtgcaaaagc 50095013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 50503418 - 50503360
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||||||||| |||| | |||  |||||||||||||||||||||||||||    
T  50503418 tctacgcacgagccggatttgtcgcccaccaatggtgggtcggaaaccgatgcgaaagc 50503360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 1764253 - 1764196
Alignment:
Q  2 ctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||| ||||||||||| | ||||||| | |||||||||| |||||||||||    
T  1764253 ctacgcatgaggcggattagtcgcccacctttgataggtcggaaactgatgcgaaagc 1764196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 44969716 - 44969773
Alignment:
Q  2 ctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||||| | | ||||||| |||||||||| || ||||||    
T  44969716 ctacgcatgagccggattagtcgtccatcattggtggatcggaaaccggtgtgaaagc 44969773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45726490 - 45726433
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||||||||||||  ||||||||||| ||||| || | ||||||||    
T  45726490 tctacgcatgagccggattagtcgttcacctttggtggatcggagactggtgcgaaag 45726433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10336567 - 10336619
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgc 53  Q
    |||||||||||||||||||| ||||| ||||||| ||| ||| ||||||||||    
T  10336567 tctacgcatgagccggattaatcgtccacctttgatggatcgaaaaccgatgc 10336619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 32150977 - 32150921
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| ||||||||   ||||||| ||||||| ||||||||||||||||    
T  32150977 tacgcatgagccgaattagtcgctcacctttgatgggtcgaaaaccgatgcgaaagc 32150921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 46929789 - 46929737
Alignment:
Q  7 catgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||| || |||| ||| ||| ||||||||||||||||    
T  46929789 catgagccggattagtcgtccacttttgatggatcgaaaaccgatgcgaaagc 46929737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33418172 - 33418125
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaacc 48  Q
    |||| ||| ||||||||||||||||| ||||||||| |||||||||||    
T  33418172 tctatgcacgagccggattagtcgtccacctttggtcggtcggaaacc 33418125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35908809 - 35908865
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| ||| |  ||||||||||||||| ||| |||||    
T  35908809 tctacgcatgagccggattagtcgtccaccat--gtgggtcggaaaccggtgcaaaagc 35908865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3850799 - 3850741
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||| ||||||||||| | ||||||  |||||||||||||| |||||||||    
T  3850799 tctacgcacgaggcggattagtcgcccacctttaatgggtcggaaaccggtgcgaaagc 3850741  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16956517 - 16956575
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||  |||||||||    
T  16956517 tctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgcgaaagc 16956575  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17092534 - 17092480
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcga 55  Q
    |||||||| ||||||||||||||||| ||||||||| | || ||||||| |||||    
T  17092534 tctacgcacgagccggattagtcgtccacctttggtagatcagaaaccggtgcga 17092480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18915918 - 18915976
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| |||||||||||||||   ||| ||||||||| |||||||| |||||||||    
T  18915918 tctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaagc 18915976  T

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Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33498896 - 33498838
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||||||| ||||||| ||| ||| ||| || | |||||||    
T  33498896 tctacgcatgagccggattagtcgtccacctttgatggatcgtaaagcggtacgaaagc 33498838  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14357806 - 14357863
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| || |||||||| |||| |||| ||| |||||||||||||| ||||||||    
T  14357806 tctacgcacgaaccggattaatcgtttaccattgatgggtcggaaaccggtgcgaaag 14357863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31576604 - 31576547
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||||||| ||||||||| | ||||| || ||||||||||| ||| ||||    
T  31576604 tctacgcatgagccggcttagtcgtccatctttgatgtgtcggaaaccggtgcaaaag 31576547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 48761227 - 48761272
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaa 46  Q
    |||||||| |||| |||||||||||| ||||||||| |||||||||    
T  48761227 tctacgcacgagctggattagtcgtccacctttggtcggtcggaaa 48761272  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50371891 - 50371834
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||  |||||||||||||| | | ||||||||| |||||||||| ||||||||    
T  50371891 tctacgcacaagccggattagtcgcccatctttggtggatcggaaaccggtgcgaaag 50371834  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 6899619 - 6899667
Alignment:
Q  11 agccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||| | ||||||| ||| |||||||||| |||||||||    
T  6899619 agccggattagtcgcccacctttgatggatcggaaaccggtgcgaaagc 6899667  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 25178623 - 25178575
Alignment:
Q  11 agccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||  |||||| |||||||| |||||||| |||||||    
T  25178623 agccggattagtcgttcacctttagtgggtcgaaaaccgatacgaaagc 25178575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 47084231 - 47084175
Alignment:
Q  3 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||| |  | || |||||||||| |||||||| |||||||||    
T  47084231 tacgcatgagccggattagccacccacttttggtgggttggaaaccggtgcgaaagc 47084175  T

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Target: scaffold0291 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6908 - 6966
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  6908 tctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagc 6966  T

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Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8757 - 8699
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| | |||||||||    
T  8757 tctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaagc 8699  T

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Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 224370 - 224427
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| ||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  224370 tctacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaag 224427  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 186570 - 186618
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 49  Q
    |||||||| ||||||||||||||||  | |||| |||||||||||||||    
T  186570 tctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccg 186618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42888 - 42831
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  42888 tctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 42831  T

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Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9495 - 9551
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaa 57  Q
    ||||||||||||||  |||||||||| |||||||||||||| ||||||| |||||||    
T  9495 tctacgcatgagccaaattagtcgtccacctttggtgggtcagaaaccggtgcgaaa 9551  T

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Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 155767 - 155709
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | |||||||||||||||||| ||| |||||||||    
T  155767 tctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaagc 155709  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 319475 - 319533
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||| |||||||| |||||||||||| |||||||||||| ||||||||| |||||||||    
T  319475 tctatgcatgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaagc 319533  T

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Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 623 - 681
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||| ||||||| |||||||||   |||||||||||||||||||||| |||||||||    
T  623 tctacgtatgagccagattagtcgctcacctttggtgggtcggaaaccggtgcgaaagc 681  T

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Target: scaffold0384 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6025 - 6077
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgc 53  Q
    |||||||||||| || |||||||||| ||| ||||||||||||||||||||||    
T  6025 tctacgcatgagacgaattagtcgtccaccattggtgggtcggaaaccgatgc 6077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9898 - 9945
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaacc 48  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  9898 tctacgcacgagccggattagtcgtccacctttggtgggtcagaaacc 9945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1670 - 1612
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||||||||  |||||||| | ||||||||||||||| |||||| |||||||||    
T  1670 tctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgcgaaagc 1612  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 68567 - 68621
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcga 55  Q
    |||||||| ||||||||||||||| | ||||||||||||||| |||||| |||||    
T  68567 tctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 68621  T

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Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16932 - 16989
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| ||||| |||||||||   ||||||||||||| |||||||||||||||||    
T  16932 tctacgcacgagccagattagtcgctcacctttggtgggttggaaaccgatgcgaaag 16989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 8232 - 8274
Alignment:
Q  17 attagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||| ||||||||| |||||||||||| |||||||||    
T  8232 attagtcgtccacctttggtaggtcggaaaccggtgcgaaagc 8274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41097 - 41155
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||| ||||||||||||||| | | |||||||| ||||||||||| | |||||||    
T  41097 tctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccggttcgaaagc 41155  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7891 - 7833
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaagc 59  Q
    ||||||||| ||| |||||||||| | ||||||||||| |||||||||| | |||||||    
T  7891 tctacgcattagctggattagtcgcccacctttggtggatcggaaaccggtacgaaagc 7833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 95035 - 94978
Alignment:
Q  3 tacgcatgagccggattagtcgtctacc-tttggtgggtcggaaaccgatgcgaaagc 59  Q
    |||||||||||||||||||||| | ||| |||||||||||||||| || ||| |||||    
T  95035 tacgcatgagccggattagtcgcccaccatttggtgggtcggaaatcggtgcaaaagc 94978  T

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Target: scaffold0376 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12723 - 12780
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| || |||||||||||| | ||||||| |||||| ||||||| ||||||||    
T  12723 tctacgcacgaaccggattagtcgcccacctttgatgggtcagaaaccggtgcgaaag 12780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 58089 - 58032
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    ||||||||||||  |||||||||| ||| ||||||||| ||||| |||| ||||||||    
T  58089 tctacgcatgagttggattagtcgcctatctttggtggatcggataccggtgcgaaag 58032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25138 - 25195
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||||||  | ||||| ||||| ||||||||||| |||||||||| ||||||||    
T  25138 tctacgcatgaatcagattaatcgtccacctttggtggatcggaaaccggtgcgaaag 25195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 250081 - 250024
Alignment:
Q  1 tctacgcatgagccggattagtcgtctacctttggtgggtcggaaaccgatgcgaaag 58  Q
    |||||||| |||||||||||||||    |||||||||||||||||| || ||||||||    
T  250081 tctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaag 250024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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