View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18679_high_9 (Length: 367)

Name: NF18679_high_9
Description: NF18679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18679_high_9
NF18679_high_9
[»] chr6 (16 HSPs)
chr6 (28-367)||(20237177-20237516)
chr6 (28-367)||(22131161-22131500)
chr6 (28-367)||(22205557-22205907)
chr6 (180-357)||(24385789-24385966)
chr6 (132-364)||(18996893-18997131)
chr6 (180-357)||(20085416-20085593)
chr6 (180-298)||(18981104-18981222)
chr6 (196-367)||(21971313-21971484)
chr6 (196-367)||(20204752-20204923)
chr6 (196-367)||(22098775-22098946)
chr6 (28-97)||(20085238-20085307)
chr6 (33-97)||(18996804-18996868)
chr6 (196-270)||(20232093-20232167)
chr6 (196-270)||(22126077-22126151)
chr6 (28-93)||(20193272-20193337)
chr6 (28-93)||(22087295-22087360)
[»] scaffold0264 (1 HSPs)
scaffold0264 (123-367)||(15309-15556)
[»] scaffold0074 (2 HSPs)
scaffold0074 (181-367)||(48386-48572)
scaffold0074 (51-96)||(48644-48689)
[»] scaffold0007 (2 HSPs)
scaffold0007 (132-367)||(5913-6154)
scaffold0007 (51-97)||(6179-6225)


Alignment Details
Target: chr6 (Bit Score: 332; Significance: 0; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 28 - 367
Target Start/End: Original strand, 20237177 - 20237516
Alignment:
Q  28 acaacaatgaagataattttctgtttctctgcacaaaataagtaaaatttataaatctcataatttcaatatattgaatggaatcctacttgagaaaaga 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20237177 acaacaatgaagataattttctgtttctctgcacaaaataagtaaaatttataaatctcataatttcaatatattgaatggaatcctacttgagaaaaga 20237276  T
Q  128 cttcacctgcatttcctggtaatggggaaggactcccaggcggctgagctttgtccatgtaaaaaggaaacaattcaaacctcagattacagctaggata 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20237277 cttcacctgcatttcctggtaatggggaaggactcccaggcggctgagctttgtccatgtaaaaaggaaacaattcaaacctcagattacagctaggata 20237376  T
Q  228 cataattcttcccccaacactgcccaaatttggccatggaattgctgtaacgatcacagtatttagacaagaagcgcaatcctcactagacaaatcgctc 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  20237377 cataattcttcccccaacactgcccaaatttggccatggaattgctgtaacgatcacagtatttagacaagaagcgcaatcctcactagacaaatctctc 20237476  T
Q  328 gtacattggccaagactatacaaggtttgtttatcattca 367  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  20237477 gtacattgtccaagactatacaaggtttgtttatcattca 20237516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 28 - 367
Target Start/End: Original strand, 22131161 - 22131500
Alignment:
Q  28 acaacaatgaagataattttctgtttctctgcacaaaataagtaaaatttataaatctcataatttcaatatattgaatggaatcctacttgagaaaaga 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22131161 acaacaatgaagataattttctgtttctctgcacaaaataagtaaaatttataaatctcataatttcaatatattgaatggaatcctacttgagaaaaga 22131260  T
Q  128 cttcacctgcatttcctggtaatggggaaggactcccaggcggctgagctttgtccatgtaaaaaggaaacaattcaaacctcagattacagctaggata 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22131261 cttcacctgcatttcctggtaatggggaaggactcccaggcggctgagctttgtccatgtaaaaaggaaacaattcaaacctcagattacagctaggata 22131360  T
Q  228 cataattcttcccccaacactgcccaaatttggccatggaattgctgtaacgatcacagtatttagacaagaagcgcaatcctcactagacaaatcgctc 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22131361 cataattcttcccccaacactgcccaaatttggccatggaattgctgtaacgatcacagtatttagacaagaagcgcaatcctcactagacaaatctctc 22131460  T
Q  328 gtacattggccaagactatacaaggtttgtttatcattca 367  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  22131461 gtacattgtccaagactatacaaggtttgtttatcattca 22131500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 28 - 367
Target Start/End: Complemental strand, 22205907 - 22205557
Alignment:
Q  28 acaacaatgaagataattttctgtttctctgcacaaaataagtaaaatttataaatctcataatttcaatatattgaatggaatcctacttg-------- 119  Q
    ||||||||||| | ||||||| |||| |||||||||||||| || | ||||||||||||||||||||||| |||||||| ||||||||| ||            
T  22205907 acaacaatgaacacaattttccgtttgtctgcacaaaataattaca-tttataaatctcataatttcaatgtattgaatcgaatcctacatgtaaaattg 22205809  T
Q  120 -agaaaagacttcacctgcatttcctggtaatggggaaggactcccaggcggctgagctttgtc------catgtaaaaaggaaacaattcaaacctcag 212  Q
     || |||||||||||||||||||| |||||| || |   |||||||||| |||||||||| |||      |||||||||||| |||||||||||||||||    
T  22205808 gagcaaagacttcacctgcatttcgtggtaaaggtg---gactcccaggtggctgagcttcgtcaccctccatgtaaaaagggaacaattcaaacctcag 22205712  T
Q  213 attacagctaggatacataattcttcccccaacactgcccaaatttggccatggaattgctgtaacgatcacagtatttagacaagaagcgcaatcctca 312  Q
    ||| ||||||||||| |||||||||||||||||||| || ||||||| ||||||||||| ||||  ||||||| |||||||||||| ||||||| |||||    
T  22205711 attgcagctaggatagataattcttcccccaacactaccgaaatttgaccatggaattgatgtagtgatcacattatttagacaagtagcgcaaccctca 22205612  T
Q  313 ctagacaaatcgctcgtacattggccaagactatacaaggtttgtttatcattca 367  Q
    ||||||||||| | ||||||||| |||||||||||||||||||||  ||||||||    
T  22205611 ctagacaaatctcgcgtacattgtccaagactatacaaggtttgtacatcattca 22205557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 180 - 357
Target Start/End: Complemental strand, 24385966 - 24385789
Alignment:
Q  180 gtccatgtaaaaaggaaacaattcaaacctcagattacagctaggatacataattcttcccccaacactgcccaaatttggccatggaattgctgtaacg 279  Q
    ||||||||||||  | |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  24385966 gtccatgtaaaattggaacaattcaaacctcagattgcagctaggatatataattcttcccccaacactacccaaattttaccatggaattgctgtaacg 24385867  T
Q  280 atcacagtatttagacaagaagcgcaatcctcactagacaaatcgctcgtacattggccaagactatacaaggtttgt 357  Q
    ||||||  ||||||||||||||||||||||| ||||||||||||   ||||||||| |||||| ||||||||||||||    
T  24385866 atcacatcatttagacaagaagcgcaatcctgactagacaaatcttgcgtacattgtccaagagtatacaaggtttgt 24385789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 132 - 364
Target Start/End: Original strand, 18996893 - 18997131
Alignment:
Q  132 acctgcatttcctggtaatggggaaggactcccaggcggctgagctttgtc------catgtaaaaaggaaacaattcaaacctcagattacagctagga 225  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||      |||||||||  | |||||||||||||||||||| |||||||||    
T  18996893 acctgcattttctggtaatggggaaggactcccaggcggcagagcttcgtcaccctccatgtaaaattggaacaattcaaacctcagattgcagctagga 18996992  T
Q  226 tacataattcttcccccaacactgcccaaatttggccatggaattgctgtaacgatcacagtatttagacaagaagcgcaatcctcactagacaaatcgc 325  Q
    || ||||||||||||| |||| | | ||| |||| ||||||||||||| ||  |||||||   ||||||||||||| ||||||||||||||||||||| |    
T  18996993 tatataattcttcccctaacattactcaattttgaccatggaattgctctattgatcacatcctttagacaagaagtgcaatcctcactagacaaatctc 18997092  T
Q  326 tcgtacattggccaagactatacaaggtttgtttatcat 364  Q
     ||||||||| ||||||||||||||| |||||| |||||    
T  18997093 gcgtacattgtccaagactatacaagttttgttcatcat 18997131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 180 - 357
Target Start/End: Original strand, 20085416 - 20085593
Alignment:
Q  180 gtccatgtaaaaaggaaacaattcaaacctcagattacagctaggatacataattcttcccccaacactgcccaaatttggccatggaattgctgtaacg 279  Q
    ||||||||||||  | |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||||| ||||||  |    
T  20085416 gtccatgtaaaattggaacaattcaaacctcagattgcagctaggatatataattcttcccccaacactacccaaatttgaccatggaatcgctgtattg 20085515  T
Q  280 atcacagtatttagacaagaagcgcaatcctcactagacaaatcgctcgtacattggccaagactatacaaggtttgt 357  Q
    ||||||  |||||||||||||| |||||||| ||||||||||||   ||||||||| |||||| ||||||||||||||    
T  20085516 atcacatcatttagacaagaagtgcaatcctgactagacaaatcttgcgtacattgtccaagagtatacaaggtttgt 20085593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 18981104 - 18981222
Alignment:
Q  180 gtccatgtaaaaaggaaacaattcaaacctcagattacagctaggatacataattcttcccccaacactgcccaaatttggccatggaattgctgtaacg 279  Q
    ||||||||||||  | |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||       
T  18981104 gtccatgtaaaattggaacaattcaaacctcagattgcagctaggatatataattcttcccccaacactacccaaatttgaccatggaattgctgtagta 18981203  T
Q  280 atcacagtatttagacaag 298  Q
    ||||||  |||||||||||    
T  18981204 atcacatcatttagacaag 18981222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 196 - 367
Target Start/End: Original strand, 21971313 - 21971484
Alignment:
Q  196 aacaattcaaacctcagattacagctaggatacataattcttcccccaacactgcccaaatttggccatggaattgctgtaacgatcacagtatttagac 295  Q
    |||||||||||||||||||| ||||||||||| || |||||||| |||||||| ||||||  || |||||||||| || ||  ||||| |  ||||||||    
T  21971313 aacaattcaaacctcagattgcagctaggatatatgattcttcctccaacacttcccaaaaatgaccatggaatttctctactgatcatatcatttagac 21971412  T
Q  296 aagaagcgcaatcctcactagacaaatcgctcgtacattggccaagactatacaaggtttgtttatcattca 367  Q
    | |||  |||||||| ||||||||||||  | ||||||||  ||||| ||||||| ||||||||||||||||    
T  21971413 atgaattgcaatcctgactagacaaatcttttgtacattgttcaagagtatacaaagtttgtttatcattca 21971484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 367
Target Start/End: Original strand, 20204752 - 20204923
Alignment:
Q  196 aacaattcaaacctcagattacagctaggatacataattcttcccccaacactgcccaaatttggccatggaattgctgtaacgatcacagtatttagac 295  Q
    |||||||||||||||||||| ||||||||||| |  |||||||| |||||||| ||||||  || |||||||||| || ||  ||||| |  ||||||||    
T  20204752 aacaattcaaacctcagattgcagctaggatataagattcttcctccaacacttcccaaaaatgaccatggaatttctttactgatcatatcatttagac 20204851  T
Q  296 aagaagcgcaatcctcactagacaaatcgctcgtacattggccaagactatacaaggtttgtttatcattca 367  Q
    | |||  ||| || ||| | ||||||||  | ||||||||  ||| | ||||||||||||||||||||||||    
T  20204852 atgaattgcattcgtcagttgacaaatcttttgtacattgttcaacagtatacaaggtttgtttatcattca 20204923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 367
Target Start/End: Original strand, 22098775 - 22098946
Alignment:
Q  196 aacaattcaaacctcagattacagctaggatacataattcttcccccaacactgcccaaatttggccatggaattgctgtaacgatcacagtatttagac 295  Q
    |||||||||||||||||||| ||||||||||| |  |||||||| |||||||| ||||||  || |||||||||| || ||  ||||| |  ||||||||    
T  22098775 aacaattcaaacctcagattgcagctaggatataagattcttcctccaacacttcccaaaaatgaccatggaatttctttactgatcatatcatttagac 22098874  T
Q  296 aagaagcgcaatcctcactagacaaatcgctcgtacattggccaagactatacaaggtttgtttatcattca 367  Q
    | |||  ||| || ||| | ||||||||  | ||||||||  ||| | ||||||||||||||||||||||||    
T  22098875 atgaattgcattcgtcagttgacaaatcttttgtacattgttcaacagtatacaaggtttgtttatcattca 22098946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 20085238 - 20085307
Alignment:
Q  28 acaacaatgaagataattttctgtttctctgcacaaaataagtaaaatttataaatctcataatttcaat 97  Q
    ||||||||||||| |||||||||||| ||||| | |||||| ||| || |||||||||||||||||||||    
T  20085238 acaacaatgaagacaattttctgtttatctgcgcgaaataattaacatatataaatctcataatttcaat 20085307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 18996804 - 18996868
Alignment:
Q  33 aatgaagataattttctgtttctctgcacaaaataagtaaaatttataaatctcataatttcaat 97  Q
    |||||||| |||||| ||||||||||||||| |||| ||| ||||||||||| ||||| ||||||    
T  18996804 aatgaagacaattttatgtttctctgcacaagataattaacatttataaatcacataaattcaat 18996868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 20232167 - 20232093
Alignment:
Q  196 aacaattcaaacctcagattacagctaggatacataattcttcccccaacactgcccaaatttggccatggaatt 270  Q
    |||||||||||||||| |||||| |||||||| | || |||||| |||||||| |||||||  ||||| ||||||    
T  20232167 aacaattcaaacctcaaattacaactaggatataaaactcttccaccaacacttcccaaataaggccaaggaatt 20232093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 22126151 - 22126077
Alignment:
Q  196 aacaattcaaacctcagattacagctaggatacataattcttcccccaacactgcccaaatttggccatggaatt 270  Q
    |||||||||||||||| |||||| |||||||| | || |||||| |||||||| |||||||  ||||| ||||||    
T  22126151 aacaattcaaacctcaaattacaactaggatataaaactcttccaccaacacttcccaaataaggccaaggaatt 22126077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 20193272 - 20193337
Alignment:
Q  28 acaacaatgaagataattttctgtttctctgcacaaaataagtaaaatttataaatctcataattt 93  Q
    ||||||||||| |||||| |||  ||||||||||||||  | ||| |||||||||| |||||||||    
T  20193272 acaacaatgaatataattgtcttcttctctgcacaaaaccattaatatttataaatgtcataattt 20193337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 22087295 - 22087360
Alignment:
Q  28 acaacaatgaagataattttctgtttctctgcacaaaataagtaaaatttataaatctcataattt 93  Q
    ||||||||||| |||||| |||  ||||||||||||||  | ||| |||||||||| |||||||||    
T  22087295 acaacaatgaatataattgtcttcttctctgcacaaaaccattaatatttataaatgtcataattt 22087360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 138; Significance: 5e-72; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 123 - 367
Target Start/End: Original strand, 15309 - 15556
Alignment:
Q  123 aaagacttcacctgcatttcctggtaatggggaaggactcccaggcggctgagctttgtc------catgtaaaaaggaaacaattcaaacctcagatta 216  Q
    |||||||||||||||||||| |||||| || |   |||||||||| |||||||||| |||      |||||||||||| ||||||||||||||||||||     
T  15309 aaagacttcacctgcatttcgtggtaaaggtg---gactcccaggtggctgagcttcgtcaccctccatgtaaaaagggaacaattcaaacctcagattg 15405  T
Q  217 cagctaggatacataattcttcccccaacactgcccaaatttggccatggaattgctgtaacgatcacagtatttagacaagaagcgcaatcctcactag 316  Q
    ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||  ||||||| |||||||||||| ||||||| |||||||||    
T  15406 cagctaggatagataattcttcccccaacactacccaaatttgaccatggaattgatgtagtgatcacattatttagacaagtagcgcaaccctcactag 15505  T
Q  317 acaaatcgctcgtacattggccaagactatacaaggtttgtttatcattca 367  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  15506 acaaatctcgcgtacattgtccaagactatacaaggtttgtttatcattca 15556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 131; Significance: 7e-68; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 181 - 367
Target Start/End: Complemental strand, 48572 - 48386
Alignment:
Q  181 tccatgtaaaaaggaaacaattcaaacctcagattacagctaggatacataattcttcccccaacactgcccaaatttggccatggaattgctgtaacga 280  Q
    |||||||||||| | |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  48572 tccatgtaaaaacggaacaattcaaacctcagattgcagctaggatagataattcttcccccaacactacccaaatttgaccatggaattgctgtaacga 48473  T
Q  281 tcacagtatttagacaagaagcgcaatcctcactagacaaatcgctcgtacattggccaagactatacaaggtttgtttatcattca 367  Q
    |||||  ||||||||||| || |||||||| |||||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  48472 tcacatcatttagacaagtagagcaatcctgactagacaaatctctcgtacattgtgcaagactatacaaggtttgtttatcattca 48386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 48689 - 48644
Alignment:
Q  51 tttctctgcacaaaataagtaaaatttataaatctcataatttcaa 96  Q
    |||||||||||||||||| ||  ||||||||| |||||||||||||    
T  48689 tttctctgcacaaaataattagcatttataaacctcataatttcaa 48644  T

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Target: scaffold0007 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 132 - 367
Target Start/End: Complemental strand, 6154 - 5913
Alignment:
Q  132 acctgcatttcctggtaatggggaaggactcccaggcggctgagcttt------gtccatgtaaaaaggaaacaattcaaacctcagattacagctagga 225  Q
    |||||||||  || ||||||| |||||| ||||||| |||||||||||      ||||||||||||  | |||||||||||||||||||| |||||||||    
T  6154 acctgcattgtctagtaatggagaaggattcccaggtggctgagcttttttaccgtccatgtaaaattggaacaattcaaacctcagattgcagctagga 6055  T
Q  226 tacataattcttcccccaacactgcccaaatttggccatggaattgctgtaacgatcacagtatttagacaagaagcgcaatcctcactagacaaatcgc 325  Q
    || |||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||| |    
T  6054 tatataattctgcccccaacactacccaaatttgaccagggaattgctgtagcgatcacatcatttagacaagtagcgcaatcctcactagacaaatctc 5955  T
Q  326 tcgtacattggccaagactatacaaggtttgtttatcattca 367  Q
     ||||||||| |||||||||||||||||||||  ||||||||    
T  5954 gcgtacattgtccaagactatacaaggtttgtacatcattca 5913  T

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Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 6225 - 6179
Alignment:
Q  51 tttctctgcacaaaataagtaaaatttataaatctcataatttcaat 97  Q
    |||||||||||||| ||| ||| |||||||||||||||||||| |||    
T  6225 tttctctgcacaaagtaattaacatttataaatctcataattttaat 6179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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