View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1867_high_24 (Length: 255)
Name: NF1867_high_24
Description: NF1867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1867_high_24 |
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| [»] scaffold0317 (1 HSPs) |
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Alignment Details
Target: scaffold0317 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0317
Description:
Target: scaffold0317; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 19791 - 19638
Alignment:
| Q |
21 |
gttagagtttagtacaaatcttttatatctaatcctagctagctaacattcaaaccctaatcccacttaacttaacctaattttttggcgccccctatcc |
120 |
Q |
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| T |
19791 |
gttagagtttagtacatatcttttatatctaatcctagctagctaacatccaaaccctaatcccacttaacttaacctaattttttggcgccccctatcc |
19692 |
T |
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| Q |
121 |
ccaaaatttgaatttcaatctcattcttgaaaccctgatagtctccatcaatcc |
174 |
Q |
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||||||||| |||||||| |||||||||||||||||||||||||||||||||| |
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| T |
19691 |
ccaaaattttaatttcaaattcattcttgaaaccctgatagtctccatcaatcc |
19638 |
T |
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