View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1867_high_3 (Length: 535)

Name: NF1867_high_3
Description: NF1867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1867_high_3
NF1867_high_3
[»] chr7 (77 HSPs)
chr7 (1-470)||(47483865-47484334)
chr7 (167-307)||(41487789-41487929)
chr7 (208-307)||(12806906-12807005)
chr7 (168-307)||(41395673-41395812)
chr7 (200-306)||(18064721-18064827)
chr7 (208-306)||(40198603-40198701)
chr7 (167-306)||(27320293-27320432)
chr7 (168-306)||(10674122-10674260)
chr7 (199-308)||(45025591-45025700)
chr7 (199-308)||(45123242-45123351)
chr7 (215-280)||(47280231-47280296)
chr7 (208-308)||(24164513-24164613)
chr7 (167-294)||(22618174-22618301)
chr7 (209-297)||(37006508-37006597)
chr7 (162-306)||(33039565-33039711)
chr7 (242-308)||(24932380-24932446)
chr7 (200-306)||(47612289-47612395)
chr7 (208-315)||(14543258-14543365)
chr7 (199-306)||(33901037-33901144)
chr7 (167-306)||(41088851-41088990)
chr7 (199-275)||(7456461-7456537)
chr7 (168-296)||(29559448-29559576)
chr7 (170-306)||(40234779-40234915)
chr7 (200-275)||(7999491-7999566)
chr7 (213-303)||(13860273-13860363)
chr7 (203-295)||(28248441-28248533)
chr7 (60-143)||(30079279-30079362)
chr7 (321-435)||(48643197-48643312)
chr7 (77-143)||(43202728-43202794)
chr7 (83-143)||(11834167-11834227)
chr7 (83-143)||(23033000-23033060)
chr7 (163-275)||(39413858-39413970)
chr7 (209-296)||(3633243-3633330)
chr7 (239-306)||(10007658-10007725)
chr7 (221-297)||(48948950-48949028)
chr7 (316-405)||(32669642-32669732)
chr7 (321-454)||(43202826-43202960)
chr7 (243-308)||(2523856-2523921)
chr7 (78-135)||(32669561-32669618)
chr7 (391-455)||(31287303-31287367)
chr7 (47-139)||(46147494-46147586)
chr7 (365-441)||(47646311-47646387)
chr7 (60-143)||(6879800-6879883)
chr7 (240-307)||(47612373-47612440)
chr7 (85-143)||(524571-524629)
chr7 (208-270)||(31903001-31903063)
chr7 (93-143)||(40849186-40849236)
chr7 (83-140)||(27100308-27100365)
chr7 (83-140)||(27177938-27177995)
chr7 (203-272)||(29835130-29835199)
chr7 (83-143)||(26214808-26214868)
chr7 (391-455)||(27100134-27100198)
chr7 (391-455)||(27178105-27178169)
chr7 (83-143)||(29211318-29211377)
chr7 (321-387)||(8117886-8117953)
chr7 (60-143)||(23729668-23729751)
chr7 (77-143)||(27456640-27456707)
chr7 (199-306)||(36245418-36245525)
chr7 (76-143)||(36550778-36550844)
chr7 (391-462)||(40849351-40849422)
chr7 (199-301)||(8566123-8566225)
chr7 (240-306)||(21857064-21857130)
chr7 (93-143)||(22298861-22298911)
chr7 (258-308)||(22618264-22618314)
chr7 (93-143)||(47646464-47646514)
chr7 (391-468)||(524381-524458)
chr7 (77-142)||(11399436-11399500)
chr7 (258-307)||(24164617-24164666)
chr7 (242-307)||(26982758-26982823)
chr7 (242-307)||(41850594-41850659)
chr7 (321-384)||(524475-524539)
chr7 (258-290)||(11602779-11602811)
chr7 (381-441)||(22700881-22700941)
chr7 (321-384)||(27456739-27456803)
chr7 (199-287)||(34117981-34118069)
chr7 (47-143)||(35495691-35495786)
chr7 (321-384)||(46147621-46147685)
[»] chr3 (76 HSPs)
chr3 (168-309)||(45113745-45113886)
chr3 (200-306)||(27302122-27302228)
chr3 (200-307)||(53703728-53703835)
chr3 (167-294)||(43901592-43901719)
chr3 (208-297)||(21944297-21944386)
chr3 (167-308)||(31376185-31376326)
chr3 (167-296)||(53284325-53284454)
chr3 (167-307)||(39616921-39617061)
chr3 (208-307)||(19227359-19227458)
chr3 (215-306)||(46220365-46220456)
chr3 (200-306)||(16123756-16123861)
chr3 (233-309)||(50660014-50660090)
chr3 (212-306)||(24489368-24489461)
chr3 (199-314)||(44118225-44118340)
chr3 (169-307)||(50100206-50100345)
chr3 (78-143)||(2832088-2832153)
chr3 (327-470)||(44651380-44651524)
chr3 (60-143)||(22472767-22472850)
chr3 (208-294)||(36191485-36191574)
chr3 (167-306)||(48643614-48643753)
chr3 (208-306)||(48346501-48346599)
chr3 (203-264)||(8764273-8764334)
chr3 (77-138)||(45629506-45629567)
chr3 (86-143)||(45914906-45914963)
chr3 (317-412)||(4669980-4670076)
chr3 (200-264)||(8769175-8769239)
chr3 (391-468)||(4280785-4280861)
chr3 (394-470)||(55467148-55467224)
chr3 (391-454)||(48169160-48169223)
chr3 (167-272)||(2544491-2544597)
chr3 (77-143)||(37656677-37656742)
chr3 (225-275)||(44664212-44664262)
chr3 (203-272)||(6061115-6061184)
chr3 (83-140)||(25918958-25919015)
chr3 (83-143)||(21562872-21562931)
chr3 (243-307)||(21662884-21662948)
chr3 (83-143)||(27054398-27054458)
chr3 (379-451)||(42362749-42362821)
chr3 (251-306)||(2544436-2544491)
chr3 (391-470)||(26758717-26758795)
chr3 (60-143)||(44662233-44662316)
chr3 (199-294)||(45746482-45746577)
chr3 (391-470)||(52632619-52632698)
chr3 (243-306)||(53441993-53442056)
chr3 (77-143)||(36330378-36330444)
chr3 (77-143)||(44651276-44651342)
chr3 (258-307)||(31376173-31376222)
chr3 (394-455)||(46252971-46253032)
chr3 (83-143)||(55467345-55467403)
chr3 (83-143)||(2566035-2566095)
chr3 (103-143)||(4280627-4280667)
chr3 (60-140)||(10481323-10481403)
chr3 (379-455)||(25918779-25918855)
chr3 (208-272)||(27363212-27363276)
chr3 (199-307)||(44518034-44518142)
chr3 (391-455)||(45629670-45629733)
chr3 (200-256)||(51980437-51980493)
chr3 (83-143)||(54122642-54122702)
chr3 (167-291)||(19899626-19899751)
chr3 (1-143)||(20846718-20846854)
chr3 (83-134)||(48168992-48169043)
chr3 (258-308)||(53703831-53703882)
chr3 (258-308)||(8769235-8769284)
chr3 (210-292)||(13356787-13356869)
chr3 (395-441)||(17144283-17144329)
chr3 (242-308)||(51723375-51723441)
chr3 (83-136)||(8355648-8355701)
chr3 (243-308)||(28406553-28406618)
chr3 (213-290)||(36571427-36571503)
chr3 (379-412)||(51660570-51660603)
chr3 (199-272)||(52864984-52865057)
chr3 (258-290)||(4190725-4190757)
chr3 (77-117)||(4669045-4669085)
chr3 (240-308)||(9190111-9190179)
chr3 (258-306)||(39616910-39616958)
chr3 (394-470)||(45914727-45914803)
[»] chr2 (53 HSPs)
chr2 (168-307)||(15239703-15239842)
chr2 (200-307)||(28143788-28143895)
chr2 (200-307)||(36103436-36103543)
chr2 (167-309)||(40534523-40534665)
chr2 (167-307)||(45076340-45076480)
chr2 (200-297)||(23464539-23464637)
chr2 (217-306)||(27306710-27306799)
chr2 (47-142)||(28790794-28790889)
chr2 (47-142)||(30759337-30759432)
chr2 (317-460)||(30759180-30759324)
chr2 (316-423)||(30761178-30761286)
chr2 (321-470)||(15320111-15320261)
chr2 (167-308)||(25795248-25795389)
chr2 (200-297)||(41464722-41464819)
chr2 (208-291)||(9373445-9373528)
chr2 (168-291)||(11687486-11687609)
chr2 (51-142)||(13194190-13194281)
chr2 (1-143)||(22014204-22014340)
chr2 (200-294)||(3365318-3365412)
chr2 (321-470)||(12041112-12041262)
chr2 (77-143)||(41166468-41166534)
chr2 (167-296)||(6971579-6971708)
chr2 (213-312)||(27311633-27311732)
chr2 (77-139)||(1331307-1331369)
chr2 (199-308)||(12873720-12873829)
chr2 (76-142)||(30761303-30761369)
chr2 (327-462)||(1331409-1331550)
chr2 (200-297)||(38448981-38449078)
chr2 (391-470)||(36500137-36500216)
chr2 (199-309)||(41153153-41153263)
chr2 (77-142)||(27301196-27301261)
chr2 (394-462)||(13194398-13194466)
chr2 (368-412)||(32646808-32646852)
chr2 (330-441)||(1537006-1537116)
chr2 (76-143)||(17763059-17763126)
chr2 (395-470)||(17763190-17763265)
chr2 (199-288)||(12962722-12962811)
chr2 (321-462)||(27301021-27301163)
chr2 (242-288)||(28249018-28249064)
chr2 (77-143)||(31719783-31719848)
chr2 (93-143)||(34572651-34572700)
chr2 (203-280)||(4410823-4410900)
chr2 (242-307)||(5109361-5109426)
chr2 (379-468)||(11377175-11377264)
chr2 (78-143)||(15320293-15320358)
chr2 (199-288)||(32457255-32457344)
chr2 (230-294)||(44283605-44283670)
chr2 (225-297)||(6971504-6971576)
chr2 (239-306)||(7943521-7943589)
chr2 (77-143)||(11051109-11051177)
chr2 (391-447)||(11695950-11696006)
chr2 (83-143)||(36500331-36500389)
chr2 (238-306)||(36881532-36881600)
[»] chr4 (103 HSPs)
chr4 (167-309)||(54864060-54864202)
chr4 (200-307)||(35877312-35877419)
chr4 (200-306)||(8347535-8347641)
chr4 (167-309)||(43141776-43141918)
chr4 (167-307)||(37895265-37895405)
chr4 (167-307)||(36196375-36196515)
chr4 (167-306)||(33615778-33615917)
chr4 (167-305)||(43556701-43556840)
chr4 (200-297)||(50511288-50511385)
chr4 (167-307)||(33622890-33623030)
chr4 (201-289)||(50511471-50511559)
chr4 (200-291)||(35929024-35929115)
chr4 (167-307)||(32193485-32193625)
chr4 (200-297)||(52966438-52966535)
chr4 (167-309)||(25756722-25756864)
chr4 (200-306)||(31853066-31853172)
chr4 (167-297)||(54673318-54673448)
chr4 (200-295)||(52136742-52136837)
chr4 (200-270)||(25874735-25874805)
chr4 (208-306)||(42159972-42160070)
chr4 (213-306)||(24100758-24100851)
chr4 (215-291)||(52278025-52278101)
chr4 (167-302)||(4418100-4418235)
chr4 (200-297)||(19350655-19350750)
chr4 (199-272)||(40592754-40592827)
chr4 (167-307)||(29686410-29686550)
chr4 (157-307)||(27587246-27587396)
chr4 (199-256)||(1205131-1205188)
chr4 (305-425)||(17845264-17845384)
chr4 (83-143)||(21069376-21069436)
chr4 (83-143)||(27743520-27743580)
chr4 (83-143)||(41325715-41325775)
chr4 (200-296)||(56491115-56491211)
chr4 (199-314)||(1140856-1140971)
chr4 (200-307)||(9813499-9813606)
chr4 (77-143)||(18536363-18536429)
chr4 (203-297)||(23558952-23559046)
chr4 (320-455)||(11031182-11031318)
chr4 (379-438)||(3999235-3999294)
chr4 (242-309)||(53225729-53225796)
chr4 (77-143)||(48338657-48338723)
chr4 (326-410)||(13715130-13715215)
chr4 (222-291)||(22210803-22210872)
chr4 (86-143)||(35014597-35014654)
chr4 (365-426)||(48685210-48685271)
chr4 (321-468)||(4689092-4689239)
chr4 (83-139)||(18399343-18399399)
chr4 (60-142)||(18881748-18881826)
chr4 (83-143)||(20986719-20986779)
chr4 (83-143)||(48685070-48685130)
chr4 (76-143)||(41260421-41260488)
chr4 (60-135)||(48602221-48602296)
chr4 (47-142)||(49641116-49641211)
chr4 (93-143)||(9058529-9058579)
chr4 (161-287)||(22019938-22020064)
chr4 (78-143)||(4688995-4689060)
chr4 (258-307)||(29686398-29686447)
chr4 (213-306)||(44111801-44111894)
chr4 (393-470)||(48292941-48293018)
chr4 (321-441)||(49641245-49641366)
chr4 (240-305)||(56491072-56491137)
chr4 (258-306)||(4418198-4418246)
chr4 (83-143)||(4642766-4642826)
chr4 (47-119)||(17845175-17845247)
chr4 (209-253)||(28460798-28460842)
chr4 (321-412)||(35232875-35232967)
chr4 (83-143)||(36106174-36106234)
chr4 (321-441)||(41260521-41260652)
chr4 (51-143)||(46471714-46471806)
chr4 (199-307)||(48361050-48361158)
chr4 (258-306)||(52136698-52136746)
chr4 (76-143)||(5122084-5122151)
chr4 (60-143)||(14867063-14867146)
chr4 (243-306)||(19150657-19150720)
chr4 (391-470)||(21069551-21069629)
chr4 (391-462)||(23449504-23449575)
chr4 (239-294)||(24100886-24100941)
chr4 (394-441)||(25686026-25686073)
chr4 (259-306)||(25756711-25756758)
chr4 (258-301)||(28815880-28815923)
chr4 (77-140)||(32223018-32223081)
chr4 (242-309)||(45828500-45828567)
chr4 (391-470)||(48338831-48338910)
chr4 (83-137)||(23449694-23449748)
chr4 (85-143)||(28148087-28148145)
chr4 (240-306)||(37895254-37895320)
chr4 (199-304)||(47943728-47943833)
chr4 (47-143)||(48293133-48293226)
chr4 (77-143)||(53934961-53935026)
chr4 (81-130)||(1564781-1564830)
chr4 (258-307)||(3094363-3094412)
chr4 (265-306)||(17316588-17316629)
chr4 (167-240)||(38208314-38208387)
chr4 (368-441)||(54273474-54273547)
chr4 (258-302)||(1100899-1100943)
chr4 (240-308)||(5970276-5970344)
chr4 (258-306)||(7086232-7086280)
chr4 (87-143)||(7783892-7783947)
chr4 (83-143)||(8484993-8485053)
chr4 (305-384)||(18881660-18881740)
chr4 (391-463)||(29233237-29233309)
chr4 (258-306)||(32193474-32193522)
chr4 (379-435)||(45983812-45983868)
[»] chr8 (51 HSPs)
chr8 (167-307)||(34604779-34604919)
chr8 (167-309)||(13831885-13832027)
chr8 (167-306)||(45372704-45372843)
chr8 (164-307)||(44579900-44580043)
chr8 (167-309)||(29690432-29690574)
chr8 (167-309)||(43292564-43292706)
chr8 (167-307)||(7548507-7548648)
chr8 (167-308)||(35583880-35584021)
chr8 (199-307)||(34745255-34745363)
chr8 (167-307)||(43932059-43932199)
chr8 (215-309)||(9633077-9633171)
chr8 (163-260)||(40645716-40645813)
chr8 (200-288)||(38298544-38298632)
chr8 (200-307)||(43409877-43409984)
chr8 (199-307)||(9550151-9550259)
chr8 (203-291)||(38494253-38494341)
chr8 (77-143)||(3129352-3129418)
chr8 (83-143)||(24681791-24681851)
chr8 (209-300)||(5356798-5356889)
chr8 (167-297)||(24599677-24599807)
chr8 (77-143)||(28441783-28441849)
chr8 (199-307)||(7693075-7693183)
chr8 (83-143)||(18755027-18755087)
chr8 (209-309)||(35794578-35794678)
chr8 (391-470)||(11219458-11219537)
chr8 (77-140)||(15452372-15452435)
chr8 (240-307)||(43409832-43409899)
chr8 (392-470)||(24681598-24681676)
chr8 (321-425)||(27674931-27675036)
chr8 (368-441)||(28072679-28072752)
chr8 (258-307)||(43932047-43932096)
chr8 (83-143)||(1271453-1271513)
chr8 (365-441)||(13325759-13325835)
chr8 (209-269)||(41624790-41624850)
chr8 (239-306)||(35149750-35149817)
chr8 (199-288)||(10839780-10839869)
chr8 (93-143)||(14185574-14185624)
chr8 (97-143)||(39151998-39152044)
chr8 (266-308)||(45372814-45372856)
chr8 (83-140)||(12193166-12193223)
chr8 (83-140)||(12437594-12437651)
chr8 (258-307)||(13831873-13831922)
chr8 (240-309)||(34604864-34604933)
chr8 (200-233)||(45180111-45180144)
chr8 (199-307)||(1223121-1223229)
chr8 (199-267)||(9420629-9420697)
chr8 (83-143)||(11219275-11219335)
chr8 (321-361)||(12659901-12659941)
chr8 (242-306)||(14113294-14113358)
chr8 (240-308)||(35583966-35584034)
chr8 (365-412)||(38925988-38926036)
[»] chr5 (74 HSPs)
chr5 (167-308)||(20502084-20502225)
chr5 (200-309)||(29451889-29451998)
chr5 (200-306)||(38978741-38978847)
chr5 (163-296)||(24173426-24173559)
chr5 (199-306)||(32455181-32455288)
chr5 (168-306)||(27600758-27600895)
chr5 (171-308)||(35204921-35205057)
chr5 (171-308)||(35212102-35212238)
chr5 (167-307)||(7537019-7537159)
chr5 (167-306)||(5355550-5355689)
chr5 (209-307)||(33247344-33247441)
chr5 (200-297)||(29874360-29874457)
chr5 (200-295)||(29002785-29002880)
chr5 (208-307)||(19211278-19211377)
chr5 (166-304)||(9630244-9630382)
chr5 (47-143)||(26690092-26690188)
chr5 (47-143)||(26959824-26959920)
chr5 (316-462)||(26690204-26690350)
chr5 (316-462)||(26959936-26960082)
chr5 (167-306)||(13932460-13932599)
chr5 (167-309)||(73794-73936)
chr5 (213-302)||(33970713-33970802)
chr5 (323-410)||(11403011-11403099)
chr5 (167-307)||(13278884-13279024)
chr5 (76-143)||(2796526-2796593)
chr5 (76-143)||(2802687-2802754)
chr5 (365-469)||(2796343-2796447)
chr5 (365-469)||(2802504-2802608)
chr5 (47-119)||(6718876-6718948)
chr5 (316-470)||(6718984-6719135)
chr5 (47-143)||(12378785-12378881)
chr5 (391-455)||(36568199-36568263)
chr5 (391-470)||(41455366-41455445)
chr5 (215-299)||(35318572-35318656)
chr5 (83-143)||(36568035-36568094)
chr5 (47-143)||(39052840-39052936)
chr5 (321-470)||(2423220-2423375)
chr5 (77-136)||(18432403-18432462)
chr5 (60-143)||(22553654-22553737)
chr5 (321-438)||(35727383-35727499)
chr5 (60-143)||(40331185-40331268)
chr5 (258-304)||(17225159-17225205)
chr5 (81-143)||(42920741-42920803)
chr5 (365-438)||(23418425-23418498)
chr5 (328-405)||(34111368-34111445)
chr5 (317-441)||(40692853-40692977)
chr5 (371-455)||(1681662-1681746)
chr5 (259-307)||(7313928-7313976)
chr5 (60-140)||(7591185-7591265)
chr5 (258-306)||(8680642-8680690)
chr5 (208-272)||(13128226-13128290)
chr5 (243-307)||(13789818-13789882)
chr5 (63-140)||(26007075-26007155)
chr5 (60-143)||(31075323-31075407)
chr5 (391-454)||(25495585-25495647)
chr5 (60-134)||(34881031-34881106)
chr5 (243-306)||(38394427-38394490)
chr5 (321-441)||(2589406-2589532)
chr5 (240-306)||(5240221-5240287)
chr5 (391-441)||(18846008-18846058)
chr5 (391-441)||(19402726-19402776)
chr5 (47-143)||(27571764-27571857)
chr5 (82-143)||(32721109-32721171)
chr5 (266-307)||(5355660-5355701)
chr5 (344-412)||(8151154-8151223)
chr5 (397-470)||(23623501-23623574)
chr5 (103-140)||(34111483-34111520)
chr5 (60-133)||(40109332-40109405)
chr5 (242-290)||(892562-892610)
chr5 (258-290)||(1098639-1098671)
chr5 (243-307)||(3814057-3814121)
chr5 (83-143)||(25495410-25495470)
chr5 (60-143)||(25715547-25715628)
chr5 (258-290)||(40515238-40515270)
[»] chr6 (44 HSPs)
chr6 (168-308)||(12605621-12605761)
chr6 (209-307)||(30438741-30438839)
chr6 (209-306)||(10145267-10145364)
chr6 (209-297)||(12217543-12217632)
chr6 (167-307)||(28605580-28605720)
chr6 (1-136)||(14940283-14940412)
chr6 (167-291)||(9343134-9343258)
chr6 (200-306)||(8264971-8265077)
chr6 (316-440)||(13858948-13859073)
chr6 (200-295)||(359588-359683)
chr6 (322-451)||(30752982-30753112)
chr6 (167-307)||(2913331-2913471)
chr6 (210-294)||(3847461-3847545)
chr6 (77-143)||(19134806-19134873)
chr6 (51-143)||(892046-892138)
chr6 (47-123)||(13531998-13532074)
chr6 (240-307)||(2913416-2913483)
chr6 (208-295)||(29284549-29284636)
chr6 (60-143)||(32190386-32190469)
chr6 (77-143)||(30752884-30752950)
chr6 (213-275)||(33127842-33127904)
chr6 (47-135)||(13859092-13859181)
chr6 (258-307)||(31632204-31632253)
chr6 (83-143)||(29048866-29048926)
chr6 (60-143)||(28633240-28633323)
chr6 (239-309)||(2230431-2230501)
chr6 (77-135)||(14564738-14564796)
chr6 (258-308)||(18491758-18491808)
chr6 (77-143)||(22414122-22414188)
chr6 (316-384)||(14940187-14940256)
chr6 (365-470)||(22414267-22414372)
chr6 (368-455)||(6267463-6267550)
chr6 (243-306)||(17598110-17598173)
chr6 (327-384)||(13531879-13531937)
chr6 (208-270)||(26484335-26484397)
chr6 (86-143)||(13092319-13092376)
chr6 (216-245)||(17599513-17599542)
chr6 (258-307)||(32124221-32124270)
chr6 (95-143)||(8064820-8064868)
chr6 (60-143)||(12108282-12108366)
chr6 (240-308)||(14589536-14589604)
chr6 (365-441)||(15837239-15837315)
chr6 (258-306)||(23916228-23916276)
chr6 (85-141)||(24644660-24644716)
[»] chr1 (78 HSPs)
chr1 (212-306)||(45977149-45977243)
chr1 (200-306)||(52279277-52279383)
chr1 (199-308)||(51590427-51590536)
chr1 (159-307)||(19998409-19998557)
chr1 (200-275)||(29438168-29438243)
chr1 (208-303)||(27687892-27687987)
chr1 (210-307)||(44224268-44224364)
chr1 (1-143)||(52829052-52829188)
chr1 (316-470)||(52829205-52829359)
chr1 (203-273)||(13770741-13770811)
chr1 (209-307)||(15699462-15699560)
chr1 (203-304)||(13320349-13320450)
chr1 (47-143)||(36203152-36203248)
chr1 (218-280)||(32837661-32837723)
chr1 (167-308)||(13321711-13321852)
chr1 (161-306)||(31050249-31050394)
chr1 (167-305)||(22182775-22182913)
chr1 (233-310)||(25238649-25238726)
chr1 (200-291)||(48565541-48565632)
chr1 (320-441)||(24630362-24630484)
chr1 (83-143)||(6693804-6693864)
chr1 (1-136)||(17651989-17652118)
chr1 (365-469)||(23474634-23474737)
chr1 (366-470)||(26344569-26344673)
chr1 (60-143)||(9249793-9249876)
chr1 (213-272)||(12175507-12175566)
chr1 (51-140)||(17989332-17989421)
chr1 (77-138)||(25507191-25507252)
chr1 (83-138)||(25559727-25559782)
chr1 (77-143)||(35979977-35980043)
chr1 (390-468)||(36781726-36781803)
chr1 (168-253)||(34174897-34174982)
chr1 (76-133)||(50951751-50951808)
chr1 (391-455)||(12974062-12974126)
chr1 (365-441)||(15881745-15881821)
chr1 (199-295)||(18038698-18038794)
chr1 (83-143)||(26344751-26344811)
chr1 (83-143)||(52380437-52380497)
chr1 (1-143)||(10847230-10847366)
chr1 (83-138)||(12973887-12973942)
chr1 (379-470)||(27507023-27507114)
chr1 (258-309)||(48565628-48565679)
chr1 (242-308)||(9675959-9676025)
chr1 (321-426)||(35979840-35979946)
chr1 (77-143)||(35992300-35992366)
chr1 (77-143)||(41751533-41751599)
chr1 (77-143)||(44056047-44056113)
chr1 (64-141)||(6248374-6248451)
chr1 (83-143)||(40094869-40094927)
chr1 (321-438)||(44056145-44056273)
chr1 (321-441)||(50951556-50951677)
chr1 (258-307)||(51590531-51590580)
chr1 (167-252)||(52030878-52030963)
chr1 (258-303)||(52112972-52113017)
chr1 (321-384)||(8165151-8165215)
chr1 (320-380)||(11537255-11537315)
chr1 (321-412)||(25507288-25507380)
chr1 (391-455)||(35375656-35375720)
chr1 (83-142)||(8165247-8165306)
chr1 (93-140)||(15881900-15881947)
chr1 (199-306)||(26070823-26070930)
chr1 (83-142)||(36782076-36782135)
chr1 (327-441)||(3937178-3937292)
chr1 (399-469)||(8269167-8269237)
chr1 (264-306)||(22182764-22182806)
chr1 (244-306)||(29256685-29256747)
chr1 (77-123)||(32910093-32910139)
chr1 (215-288)||(640539-640611)
chr1 (395-468)||(6693621-6693694)
chr1 (213-290)||(34768331-34768407)
chr1 (94-143)||(39166903-39166952)
chr1 (242-307)||(50155383-50155448)
chr1 (239-307)||(7375551-7375619)
chr1 (321-384)||(11072978-11073042)
chr1 (211-295)||(20486667-20486751)
chr1 (243-307)||(26924211-26924275)
chr1 (327-387)||(27455581-27455641)
chr1 (199-255)||(29064191-29064247)
[»] scaffold0200 (1 HSPs)
scaffold0200 (209-307)||(25666-25765)
[»] scaffold0110 (1 HSPs)
scaffold0110 (200-307)||(40234-40341)
[»] scaffold0767 (1 HSPs)
scaffold0767 (170-309)||(3805-3944)
[»] scaffold0059 (2 HSPs)
scaffold0059 (208-307)||(26637-26736)
scaffold0059 (258-307)||(26584-26633)
[»] scaffold0176 (1 HSPs)
scaffold0176 (208-294)||(19308-19391)
[»] scaffold0023 (1 HSPs)
scaffold0023 (167-307)||(112833-112973)
[»] scaffold0533 (1 HSPs)
scaffold0533 (168-297)||(3251-3380)
[»] scaffold0015 (1 HSPs)
scaffold0015 (209-306)||(17384-17481)
[»] scaffold0027 (1 HSPs)
scaffold0027 (199-292)||(5456-5549)
[»] scaffold0287 (1 HSPs)
scaffold0287 (209-296)||(12755-12842)
[»] scaffold0148 (1 HSPs)
scaffold0148 (258-309)||(21115-21166)
[»] scaffold0204 (3 HSPs)
scaffold0204 (77-143)||(26179-26245)
scaffold0204 (391-470)||(15012-15090)
scaffold0204 (391-470)||(26353-26432)
[»] scaffold0664 (2 HSPs)
scaffold0664 (320-387)||(6392-6460)
scaffold0664 (60-143)||(6278-6361)
[»] scaffold0001 (2 HSPs)
scaffold0001 (93-143)||(427975-428025)
scaffold0001 (328-361)||(428064-428097)
[»] scaffold0460 (2 HSPs)
scaffold0460 (211-295)||(12223-12307)
scaffold0460 (211-295)||(7656-7740)
[»] scaffold0210 (2 HSPs)
scaffold0210 (83-136)||(20342-20395)
scaffold0210 (83-136)||(28234-28287)


Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 1 - 470
Target Start/End: Original strand, 47483865 - 47484334
Alignment:
Q  1 aattaaaaatgtgaacaaaaagcaagtatattatgtaagaaattttaatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47483865 aattaaaaatgtgaacaaaaagcaagtatattatgtaagaaatattaatgtaaaacatcaagattttatcattgaataaaatttcaagtagtacataaat 47483964  T
Q  101 atattttt--gaaataaaaaacaaacaagaaacttaacaagagaagnnnnnnnnntacatttcatccagtccttattataagaaacaattgannnnnnnn 198  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||         |||| ||||||| ||||||||||||||||||||||||            
T  47483965 atatttttttgaaataaaaaacaaacaagaaacttaacaagagaagaaaaaaa--tacacttcatccggtccttattataagaaacaattgatttttttt 47484062  T
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  47484063 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggacagg 47484162  T
Q  299 agggagtataacatttattaaaagtttatatgagtattggtttatgtgacataggtttaattagcattttcttatgttgcggtttgattcaattggtaaa 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  47484163 agggagtataacatttattaaaagtttatatgagtattggtttatgtgacataggtttaattagcattttcttatattgcggtttgattcagttggtaaa 47484262  T
Q  399 ataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47484263 ataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaaccaaatgc 47484334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 167 - 307
Target Start/End: Complemental strand, 41487929 - 41487789
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41487929 gtccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 41487830  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  41487829 aaaagtcaactttttcttataataaggaccggagggagtat 41487789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 12807005 - 12806906
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  12807005 gtaagtgatgtatgtagtctatatttacaataagatacattaattattttatgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 12806906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 168 - 307
Target Start/End: Original strand, 41395673 - 41395812
Alignment:
Q  168 tccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaa 267  Q
    ||||||||||||||||||||| |        ||||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  41395673 tccttattataagaaacaattaacttttttaattcattgtataagtgatgtatctagtctatatttataataagatatattaattattctatgaatctaa 41395772  T
Q  268 aaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||||||| ||||||||||| |||||||| |||||    
T  41395773 aaagtcaactttttcttataataagaaccgaaggaagtat 41395812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 200 - 306
Target Start/End: Complemental strand, 18064827 - 18064721
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||||||||| |    
T  18064827 ttcattgtttaagtgatgtatctagtctatattttcaataagatacattaattattctatgaacttaaaaagttaactttttcttatattaaggaccgga 18064728  T
Q  300 gggagta 306  Q
    |||||||    
T  18064727 gggagta 18064721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 208 - 306
Target Start/End: Complemental strand, 40198701 - 40198603
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||| ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  40198701 gtaagcgatgtatttagtctatatttacaacaagatgcattaattattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagta 40198603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 27320432 - 27320293
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         |||||||  ||||| |||| ||||||||||||||||||||||||| || ||||||| ||||||| ||    
T  27320432 gtccttattataagaaacaattgatttttttggttcattgtataagtaatgtttctagtctatatttacaataagatatatcaattattttatgaactta 27320333  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||| |||||||||||||| | ||||||||    
T  27320332 aaaagtcaactttttcttataataaggacgggagggagta 27320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 10674260 - 10674122
Alignment:
Q  168 tccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaa 267  Q
    |||||||||||||||||||||||        |||||||  |||||||||||||||| |||||||||| || |||||||||||||||||| ||||||||||    
T  10674260 tccttattataagaaacaattgactttttagattcattatgtaagtgatgtatctaatctatatttataacaagatacattaattattcaatgaacctaa 10674161  T
Q  268 aaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||| | ||  |||||||||| |||| ||||||||    
T  10674160 aaagtcaaatgttttttataataagtaccggagggagta 10674122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 45025700 - 45025591
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    |||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||| |||| | || ||||||||||||||||     
T  45025700 attcattatgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaaccaaaaaaatcaattgtttcttataataaggaccgg 45025601  T
Q  299 agggagtata 308  Q
    || |||||||    
T  45025600 agtgagtata 45025591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 45123351 - 45123242
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    ||||||||  ||||||||||||||| |||||||||| |||||||||||||||||||||||||||  ||||||||||||||||  ||||| |||||||||     
T  45123351 attcattgtataagtgatgtatctaatctatatttataataagatacattaattattctatgaatttaaaaagtcaacttttttttatagtaaggaccgg 45123252  T
Q  299 agggagtata 308  Q
    ||||| ||||    
T  45123251 agggaatata 45123242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 47280231 - 47280296
Alignment:
Q  215 atgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaactttt 280  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47280231 atgtatttagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaactttt 47280296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 24164613 - 24164513
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||||||||| ||||| |||| | || |||||||||||||||| ||||| |||    
T  24164613 gtaagtgatgtatctagtctatatttctaacaagatacattaattattctatgaaccaaaaaaatcaattgtttcttataataaggaccggagggaatat 24164514  T
Q  308 a 308  Q
    |    
T  24164513 a 24164513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 294
Target Start/End: Complemental strand, 22618301 - 22618174
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| || ||||| |||    
T  22618301 gtccttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatctagtctatatttacaacaagatacattaattactcaatgaatcta 22618202  T
Q  267 aaaagtcaacttttacttataataagga 294  Q
    |||| ||||   || |||||||||||||    
T  22618201 aaaaatcaaaaatttcttataataagga 22618174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 37006508 - 37006597
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaa-cttttacttataataaggaccg 297  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| |||||||||||  |||| ||||||||||||||||    
T  37006508 taagtgatgtatccagtttatatttacaatatgatacattaattattctatgaacttaaaaagtcaatttttttcttataataaggaccg 37006597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 162 - 306
Target Start/End: Original strand, 33039565 - 33039711
Alignment:
Q  162 atccagtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattc--tat 259  Q
    |||||| |||||||| |||||||||||||         ||||||| || || |||||||||||||||||||||||| | ||||||||||||||||  |||    
T  33039565 atccagcccttattaaaagaaacaattgactttttaggttcattgtgttagggatgtatctagtctatatttacaacatgatacattaattattctatat 33039664  T
Q  260 gaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
     ||||||||||||||| | || |||| |||||||| |||||||||||    
T  33039665 aaacctaaaaagtcaattgttccttaaaataaggaacgaagggagta 33039711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 24932446 - 24932380
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||    
T  24932446 atacattaattattctatgaacctaaaaagtcaattttttcttataataaggaccgaaggaagtata 24932380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 306
Target Start/End: Complemental strand, 47612395 - 47612289
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    |||||||  ||||| |||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||  | || || ||||||||||||| |    
T  47612395 ttcattgtataagtaatgtatctagtctatatttataacgagatacattaattattcaatgaacctaaaaagtcatttgttgctaataataaggaccgga 47612296  T
Q  300 gggagta 306  Q
    |||||||    
T  47612295 gggagta 47612289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 14543365 - 14543258
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| || ||||| ||||||| ||||   || |||||||||| ||| | |||||||||    
T  14543365 gtaagtgatgtatctagtctatatttacatcaagatacattaattactcaatgaatctaaaaaatcaaaagtttcttataataaagacaggagggagtat 14543266  T
Q  308 aacattta 315  Q
    || |||||    
T  14543265 aatattta 14543258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 306
Target Start/End: Complemental strand, 33901144 - 33901037
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    |||||||  |||| |||||||||||||||||||||| || |||||||||||| ||||||||||| | ||||| |||| | || |||||||||||||| |     
T  33901144 attcattatgtaaatgatgtatctagtctatatttataacaagatacattaactattctatgaatcaaaaaaatcaattgtttcttataataaggacagg 33901045  T
Q  299 agggagta 306  Q
    ||||||||    
T  33901044 agggagta 33901037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 41088990 - 41088851
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         || || | |||||| |||||||||||||||||||| ||  | ||||||||||||||| ||||| |||    
T  41088990 gtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaattattcaatgaatcta 41088891  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||| | || ||| |||||||||||| ||||||||    
T  41088890 aaaagtcaattgtttcttgtaataaggaccggagggagta 41088851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 199 - 275
Target Start/End: Original strand, 7456461 - 7456537
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaa 275  Q
    ||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||| || ||||| ||||||||||||    
T  7456461 attcattgtataaatgatgtatctagtctatatttacaacaagatacattaattactcaatgaatctaaaaagtcaa 7456537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 29559448 - 29559576
Alignment:
Q  168 tccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaa 267  Q
    |||||||||||||||||||||||         ||||| | |||||| |||||||||||||||||||| ||  | ||||||||||||||| ||||| ||||    
T  29559448 tccttattataagaaacaattgactttttaggttcatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaattattcaatgaatctaa 29559547  T
Q  268 aaagtcaacttttacttataataaggacc 296  Q
    |||||||| | || ||| |||||||||||    
T  29559548 aaagtcaattgtttcttgtaataaggacc 29559576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 170 - 306
Target Start/End: Original strand, 40234779 - 40234915
Alignment:
Q  170 cttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaa 269  Q
    |||||||||||||||||||||        |||||||| |||| ||||||||||||||||||||||||| ||||||||| ||||| || |||||  ||| |    
T  40234779 cttattataagaaacaattgactttttagattcattgtgtaactgatgtatctagtctatatttacaacaagatacatgaattactcaatgaatttaaga 40234878  T
Q  270 agtcaacttttacttataataaggaccgaagggagta 306  Q
    || |||   || |||||||||| || |||||||||||    
T  40234879 agacaaaaatttcttataataaagatcgaagggagta 40234915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 7999491 - 7999566
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaa 275  Q
    ||||||| ||||||||||||||||||||||||||| ||  |||| |||||||||||  ||||||||||||||||||    
T  7999491 ttcattgtgtaagtgatgtatctagtctatatttataacgagatgcattaattatttaatgaacctaaaaagtcaa 7999566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 13860273 - 13860363
Alignment:
Q  213 tgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaaggga 303  Q
    |||||||||||||||||||||| || || ||||||||||||| | ||||| |||||||||||| | || ||||||||||||| || |||||    
T  13860273 tgatgtatctagtctatatttataacaatatacattaattatacaatgaatctaaaaagtcaattgtttcttataataaggatcggaggga 13860363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 295
Target Start/End: Complemental strand, 28248533 - 28248441
Alignment:
Q  203 attgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggac 295  Q
    |||| ||||||||||||| ||||||||||||| ||  |||| |||||||||||| ||||| |||||| ||||| | || ||||||||||||||    
T  28248533 attgtgtaagtgatgtatatagtctatatttataacgagatgcattaattattcaatgaatctaaaatgtcaattgtttcttataataaggac 28248441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 30079362 - 30079279
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||   |||||||| |||||| |||||||||| ||||| |||||||||||||| ||||||  |||||||||||    
T  30079362 aagattttatctttctctaaaattttaagtagcacataaatatgttttttaaataaaaaacaaagaagaaatctaacaagagaa 30079279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 48643197 - 48643312
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacc 419  Q
    ||||| ||||||||||||| || |||| ||| ||||||||| |||||| |||||||||||||||| |||| ||||||||||  |||| |||||   ||||    
T  48643197 agtttctatgagtattggtataggtgagatatgtttaattaacatttttcttatgttgcggtttggttcagttggtaaaatgtaaactgcaaaccaaacc 48643296  T
Q  420 aaaccatttggttgag 435  Q
    |||| || ||||||||    
T  48643297 aaactatgtggttgag 48643312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 43202728 - 43202794
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||  ||| |||||||||||||||||||    
T  43202728 taaaagttcaagtagcacataaatacatttttgaaataaaaagtaaagaagaaacttaacaagagaa 43202794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 11834227 - 11834167
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| |||||||||||||||||| | |||||||||| |||||||||| ||||||||    
T  11834227 ttcaagtagcacataaatatatttttgatagaaaaaacaaagaagaaacttagcaagagaa 11834167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 23033000 - 23033060
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||||||||||||||||||||||||||  ||| || ||||||||||||||||    
T  23033000 ttcaagtagcacataaatatatttttgaaataaaaagtaaagaaaaaacttaacaagagaa 23033060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 39413970 - 39413858
Alignment:
Q  163 tccagtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaa 262  Q
    ||||||||| ||||||||||||||||||         |||||||  ||||||||||||||| || |||||||||| | |||||||||||||||| || ||    
T  39413970 tccagtcctaattataagaaacaattgattttttaagttcattgtataagtgatgtatctaatcaatatttacaacatgatacattaattattcaattaa 39413871  T
Q  263 cctaaaaagtcaa 275  Q
      |||||||||||    
T  39413870 tataaaaagtcaa 39413858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 296
Target Start/End: Original strand, 3633243 - 3633330
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggacc 296  Q
    |||||||||||||||||||| ||||| ||  |||||||| | |||  | |||||||||||||||||| | || |||||||||||||||    
T  3633243 taagtgatgtatctagtctacatttataacgagatacatcacttaaacaatgaacctaaaaagtcaaatatttcttataataaggacc 3633330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 10007658 - 10007725
Alignment:
Q  239 aagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||||| | ||||| ||||||||||||||||| |||||||  ||||||| ||||||||    
T  10007658 aagatacattaattatacaatgaatctaaaaagtcaactttttcttataaataggaccggagggagta 10007725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 48949028 - 48948950
Alignment:
Q  221 ctagtctatatttacaataagatacattaattattctatgaacctaaaa--agtcaacttttacttataataaggaccg 297  Q
    |||||||||||||| || |||||||||||||||||||||||||| ||||  ||| || | || ||||||||||||||||    
T  48949028 ctagtctatatttataacaagatacattaattattctatgaaccaaaaaagagttaattatttcttataataaggaccg 48948950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 405
Target Start/End: Original strand, 32669642 - 32669732
Alignment:
Q  316 ttaaaagtttatatgagtattggtttatgtgacataggtttaattagca-ttttcttatgttgcggtttgattcaattggtaaaataaaaa 405  Q
    |||||||||| |||| ||||| |||||||||||||||||| ||||| || ||||||||| || ||||||| |||  ||| |||||||||||    
T  32669642 ttaaaagtttctatgtgtatttgtttatgtgacataggttcaattaacatttttcttatattacggtttggttcggttgataaaataaaaa 32669732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 321 - 454
Target Start/End: Original strand, 43202826 - 43202960
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcattt-tcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacc 419  Q
    |||||||| |||||||||| ||  |||||||| |||||||||  ||| | |||||||| |||||| ||   ||||||||||||||||| ||||   ||||    
T  43202826 agtttatacgagtattggtctagatgacatagatttaattagtgtttgtattatgttgtggtttggtttggttggtaaaataaaaaccacaaaccaaacc 43202925  T
Q  420 aaaccatttggttgagtaaaaagttgatctgaata 454  Q
    |||||||  | |||||||||||  |||||||||||    
T  43202926 aaaccatgcgattgagtaaaaaagtgatctgaata 43202960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 2523856 - 2523921
Alignment:
Q  243 tacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    ||||||||||| || ||||| ||||||||||||||||| |||||||  ||||||| ||||||||||    
T  2523856 tacattaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggagggagtata 2523921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 32669561 - 32669618
Alignment:
Q  78 aaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaa 135  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||| || ||||||||    
T  32669561 aaaaattcaagtagtacatatatataattttgaaataaaaaacaaagaaaaaacttaa 32669618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 455
Target Start/End: Complemental strand, 31287367 - 31287303
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    |||||||||| |||||||||||  ||||||||||||  |||||||||||||  ||||||||||||    
T  31287367 ttggtaaaattaaaaccgcaaaccgaaccaaaccatgcggttgagtaaaaaaatgatctgaatac 31287303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 46147494 - 46147586
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaag 139  Q
    ||||||||| |  ||||||||||  |||  ||||| |||||| || ||||||||||||||||  |||||||| |||| |||||||||||||||    
T  46147494 aatgtaaaagactaagattttattattgtctaaaagttcaagcagcacataaatatattttttgaataaaaagcaaagaagaaacttaacaag 46147586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 441
Target Start/End: Complemental strand, 47646387 - 47646311
Alignment:
Q  365 ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    |||||||||||||||| ||| |||  || |||||||||||||||||||  ||||||||  || ||||||||||||||    
T  47646387 ttttcttatgttgcggattggttcggttagtaaaataaaaaccgcaaaccgaaccaaataatatggttgagtaaaaa 47646311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 6879883 - 6879800
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   ||||| ||||||||  || |||| ||||| ||||||||||||| ||| |||||||||||||||||||    
T  6879883 aagattttatcattctctaaaaattcaagtaacacgtaaaaatattgttgaaataaaaaataaagaagaaacttaacaagagaa 6879800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 47612373 - 47612440
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||| |||| | |||||||||||||||||| |  | |||||||||||||||| |||||||||    
T  47612373 agatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccggagggagtat 47612440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 524629 - 524571
Alignment:
Q  85 caagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||| | ||||||| |||||||||||||||| |||| |||||||||||||| ||||    
T  524629 caagtagcatataaatacatttttgaaataaaaagcaaagaagaaacttaacaatagaa 524571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 31903001 - 31903063
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaa 270  Q
    |||| ||||||||||||||||||||||  |  | ||||||||||||||| |||||||||||||    
T  31903001 gtaaatgatgtatctagtctatatttatgacgaaatacattaattattcaatgaacctaaaaa 31903063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 40849186 - 40849236
Alignment:
Q  93 acataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||| ||||    
T  40849186 acataaatacatttttgaaataaaaagcaaaaaagaaacttaacaacagaa 40849236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 27100365 - 27100308
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    ||||||||| | ||||||||||||| |||| ||||| |||| ||||||||||||||||    
T  27100365 ttcaagtagcatataaatatattttggaaagaaaaagcaaagaagaaacttaacaaga 27100308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 27177938 - 27177995
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    ||||||||| | ||||||||||||| |||| ||||| |||| ||||||||||||||||    
T  27177938 ttcaagtagcatataaatatattttggaaagaaaaagcaaagaagaaacttaacaaga 27177995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 29835130 - 29835199
Alignment:
Q  203 attgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagt 272  Q
    |||| |||| ||||||||||| | |||||||||||  ||||| ||||||||||| ||||| |||||||||    
T  29835130 attgtgtaaatgatgtatctaatttatatttacaacgagatatattaattattcaatgaatctaaaaagt 29835199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 26214868 - 26214808
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||| |||| |||| |||||||||||||||| |||| |||||||||||||| ||||    
T  26214868 ttcaaatagcacatgaatacatttttgaaataaaaagcaaagaagaaacttaacaaaagaa 26214808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 455
Target Start/End: Complemental strand, 27100198 - 27100134
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    |||||||||| |||||||||||   |||||||||||  |||||||||||||  ||||||||||||    
T  27100198 ttggtaaaatcaaaaccgcaaaccaaaccaaaccatacggttgagtaaaaaagtgatctgaatac 27100134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 455
Target Start/End: Original strand, 27178105 - 27178169
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    |||||||||| |||||||||||   |||||||||||  |||||||||||||  ||||||||||||    
T  27178105 ttggtaaaatcaaaaccgcaaaccaaaccaaaccatacggttgagtaaaaaagtgatctgaatac 27178169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 29211377 - 29211318
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||||||||| |||||| |||||||| | ||| |||||||||||||||||||    
T  29211377 ttcaagtagcacataaatacatttttaaaataaaaga-aaagaagaaacttaacaagagaa 29211318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 8117953 - 8117886
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgatt 387  Q
    |||||||||||||||||||||| |||| | |  |||||||| | |||| |||||||||||||||||||    
T  8117953 agtttatatgagtattggtttaggtgatacatttttaattaacgtttttcttatgttgcggtttgatt 8117886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 23729668 - 23729751
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| | || | ||||| |||||||||   || |||| |||||||||||||||| |||| |||||||||| ||||||||    
T  23729668 aagattttaacatttactaaaaattcaagtagcgtatgaatacatttttgaaataaaaagcaaagaagaaacttatcaagagaa 23729751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 27456640 - 27456707
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaac-aagaaacttaacaagagaa 143  Q
    ||||| || |||||| ||||||||| |||||| ||||||||| ||||  |||||||||||||||||||    
T  27456640 taaaagtttaagtagcacataaatacattttttaaataaaaagcaaaagaagaaacttaacaagagaa 27456707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 306
Target Start/End: Original strand, 36245418 - 36245525
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    ||||||||| ||| |||||||| | |||||||||    | ||||||||| ||||| || ||||| |||||||||||| |||| |||||||  ||||| |     
T  36245418 attcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaagtcaattttttcttataaataggacagg 36245517  T
Q  299 agggagta 306  Q
    ||||||||    
T  36245518 agggagta 36245525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 36550778 - 36550844
Alignment:
Q  76 ataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||||||||||||  | ||||||| | ||| ||||||||||||||| ||||| |||||||||||||    
T  36550778 ataaaatttcaagtatcatataaatacagttt-gaaataaaaaacaaagaagaagcttaacaagagaa 36550844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 462
Target Start/End: Original strand, 40849351 - 40849422
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaa 462  Q
    |||||||||| |||||||||||   |||||||||||  |||||||||||||  ||||| |||||| ||||||    
T  40849351 ttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaagtgatccgaatacatccaaa 40849422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 301
Target Start/End: Original strand, 8566123 - 8566225
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    ||||||||| ||| |||||||| | |||||||||    | ||||||||| ||||| || ||||| ||||||| |||| |||| |||||||  ||||||||    
T  8566123 attcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaaatcaaatttttcttataaataggaccga 8566222  T
Q  299 agg 301  Q
    |||    
T  8566223 agg 8566225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 21857130 - 21857064
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||||||||| |||   ||||||||| ||||||| |||||||||  ||||| ||||||||    
T  21857130 agatacattaattattcaatgtgtctaaaaagtaaacttttgcttataatagtgaccggagggagta 21857064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 22298861 - 22298911
Alignment:
Q  93 acataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| |||||||| | ||||| |||| |||||||||||||||||||    
T  22298861 acataaataaatttttgatagaaaaagcaaaaaagaaacttaacaagagaa 22298911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 22618264 - 22618314
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    |||||||||||||||||| | || |||||||||||||||| || |||||||    
T  22618264 atgaacctaaaaagtcaattgtttcttataataaggaccggagtgagtata 22618314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 47646514 - 47646464
Alignment:
Q  93 acataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| |||||| |||||||||  ||| |||||||||||||||||||    
T  47646514 acataaatacattttttaaataaaaagtaaagaagaaacttaacaagagaa 47646464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 468
Target Start/End: Complemental strand, 524458 - 524381
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaat 468  Q
    |||||||||| |||||||||||   |||||||||||  ||||||| |||||  ||||| |||||| ||||||| ||||    
T  524458 ttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagcaaaaaagtgatccgaatacatccaaaccaaat 524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 11399436 - 11399500
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagaga 142  Q
    ||||| ||||||||| |||||| || ||||| |||||||||| |||  ||||||||||||||||||    
T  11399436 taaaagttcaagtagaacataa-tacattttagaaataaaaagcaacgaagaaacttaacaagaga 11399500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 24164617 - 24164666
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||| | || ||||||||||||| || |||||||||    
T  24164617 atgaacctaaaaagtcaaatgtttcttataataaggatcggagggagtat 24164666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 26982823 - 26982758
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||||||||| ||| | ||||||||| || |||| |||||||||  ||||||||| |||||    
T  26982823 atacattaattattcaatgtatctaaaaagtgaagttttgcttataatagtgaccgaaggaagtat 26982758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 41850659 - 41850594
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||||||||| ||||| ||||||| | ||||||| |||||||  | ||||| |||||||||    
T  41850659 atacattaattattcaatgaatctaaaaaattaactttttcttataaataagaccgtagggagtat 41850594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 524539 - 524475
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcattttctt-atgttgcggtttg 384  Q
    ||||| |||||||| |||| || ||||||||| ||||||||| ||||| || |||||||||||||    
T  524539 agtttctatgagtactggtctaggtgacatagatttaattagaattttttttatgttgcggtttg 524475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 11602811 - 11602779
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataata 290  Q
    ||||||||||||| |||||||||||||||||||    
T  11602811 atgaacctaaaaaatcaacttttacttataata 11602779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 22700941 - 22700881
Alignment:
Q  381 tttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    |||| ||| |||||||||||||||| ||||||  ||||||||||||  | |||||||||||    
T  22700941 tttggttctattggtaaaataaaaatcgcaaaccgaaccaaaccatacgattgagtaaaaa 22700881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 27456739 - 27456803
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattag-cattttcttatgttgcggtttg 384  Q
    ||||| ||||||||||||| || | ||||||| |||||||||   ||||||||||||||||||||    
T  27456739 agtttctatgagtattggtctaggagacatagatttaattagtgtttttcttatgttgcggtttg 27456803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 34117981 - 34118069
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttata 287  Q
    ||||||||| ||| |||||||| | |||||||||    | |||||||||||||||  | |||||  |||||||||||||||| ||||||    
T  34117981 attcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatttaaaaagtcaactttttcttata 34118069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 35495691 - 35495786
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||  |||||||||| ||   ||||| ||||||||| ||||||||| || || ||| | |||| |||| |||||||||||||||||||    
T  35495691 aatgtaaaagattgagattttatcattctgtaaaagttcaagtagcacataaataaatattggaa-tgaaaagcaaagaagaaacttaacaagagaa 35495786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 46147621 - 46147685
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttg 384  Q
    ||||| |||||||||| || ||||| |||||| |||||||||  |||| ||||||||||||||||    
T  46147621 agtttttatgagtatttgtctatgtaacatagatttaattagtgtttttcttatgttgcggtttg 46147685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 168 - 309
Target Start/End: Original strand, 45113745 - 45113886
Alignment:
Q  168 tccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaa 267  Q
    |||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45113745 tccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaa 45113844  T
Q  268 aaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  45113845 aaagtcaactttttcttataataaggaccggagggagtataa 45113886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 27302122 - 27302228
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |    
T  27302122 ttcattgtataagtgatgtatctagtctatatttacaattagatacattaattattctatgaacctaaaaagtcaactttttcttataataaagaccgga 27302221  T
Q  300 gggagta 306  Q
    || ||||    
T  27302222 ggaagta 27302228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 200 - 307
Target Start/End: Complemental strand, 53703835 - 53703728
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| | || |||||||||||||||| |    
T  53703835 ttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccgga 53703736  T
Q  300 gggagtat 307  Q
    ||||||||    
T  53703735 gggagtat 53703728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 167 - 294
Target Start/End: Complemental strand, 43901719 - 43901592
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||||||||||| |         ||||||| |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  43901719 gtccttattataagaaacaattaacttttttggttcattgtgtaaatgatgtacctagtctatattttcaataagatacattaattattctatgaaccta 43901620  T
Q  267 aaaagtcaacttttacttataataagga 294  Q
    |||||||||||||| | |||||||||||    
T  43901619 aaaagtcaactttttcatataataagga 43901592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 208 - 297
Target Start/End: Complemental strand, 21944386 - 21944297
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccg 297  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  21944386 gtaagtggtgtatctagtctatatctacactaagatacattaattattctatgaacctaaaaagtcaattttttcttataataaggaccg 21944297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 167 - 308
Target Start/End: Original strand, 31376185 - 31376326
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||| ||||         ||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |    
T  31376185 gtccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataagaagatacattaattattctatgaaccaa 31376284  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    ||||||||| | || ||| |||||||||||| ||||||||||    
T  31376285 aaaagtcaattgtttcttgtaataaggaccggagggagtata 31376326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 53284454 - 53284325
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         || ||||  |||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  53284454 gtccttattataagaaacaattgatttttttggtttattgtataagtgatgtatctagtctacatttacaataagatacattaattattttatgaaacta 53284355  T
Q  267 aaaagtcaacttttacttataataaggacc 296  Q
    |||| ||||||||| |||||||||||||||    
T  53284354 aaaaatcaactttttcttataataaggacc 53284325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 167 - 307
Target Start/End: Original strand, 39616921 - 39617061
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||| ||||         ||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |    
T  39616921 gtccttattataagaaacatttgacttttaaggttcattatgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaaccaa 39617020  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||| | || ||| |||||||||||| |||||||||    
T  39617021 aaaagtcaattgtttcttgtaataaggaccggagggagtat 39617061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 19227359 - 19227458
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||| |||||||||||||||||||||| || |||||| ||||||||||||||||||| ||||| |||| | || |||||||||||||||| |||||||||    
T  19227359 gtaaatgatgtatctagtctatatttataacaagataaattaattattctatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagtat 19227458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 46220456 - 46220365
Alignment:
Q  215 atgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  |||||| |||| |||| |||||||||||||||| | ||||||    
T  46220456 atgtatctagtatatatttacaataagatacattaattattctatgaatataaaaaatcaattttttcttataataaggaccggatggagta 46220365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 200 - 306
Target Start/End: Complemental strand, 16123861 - 16123756
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||| |||| |||||||||||||||| |    
T  16123861 ttcattgtataagtaatgtatctagtctatatttacaataagatatattaattattttataaacct-aaaagtcaattttttcttataataaggaccgga 16123763  T
Q  300 gggagta 306  Q
    || ||||    
T  16123762 ggaagta 16123756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 309
Target Start/End: Original strand, 50660014 - 50660090
Alignment:
Q  233 tacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| || ||||||||    
T  50660014 tacaataagatacattaattattctataaatctaaaaagtcaactttttcttataataaggaccggagagagtataa 50660090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 24489368 - 24489461
Alignment:
Q  212 gtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||  |||||| ||||||||  ||||||||||||| || ||||||||    
T  24489368 gtgatgtatctagtttatatttactataagatacattaattattctatgaatttaaaaa-tcaactttgtcttataataaggatcggagggagta 24489461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 314
Target Start/End: Original strand, 44118225 - 44118340
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    |||||||| |||| |||||||||||||||||||||| || || |||||||||||||   ||||| |||||||||||| | || |||||||||||||||      
T  44118225 attcattgtgtaaatgatgtatctagtctatatttataacaatatacattaattatataatgaatctaaaaagtcaattgtttcttataataaggaccag 44118324  T
Q  299 agggagtataacattt 314  Q
    ||| ||||||| ||||    
T  44118325 aggaagtataatattt 44118340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 307
Target Start/End: Original strand, 50100206 - 50100345
Alignment:
Q  169 ccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaa 268  Q
    ||||||||||||||||||||||         |||||||  |||||||||||||||||||||||||| |||||||||| |||||| ||||||||| | ||     
T  50100206 ccttattataagaaacaattgacttttttagttcattgtataagtgatgtatctagtctatatttataataagatacgttaatttttctatgaatcaaac 50100305  T
Q  269 aagtcaact-tttacttataataaggaccgaagggagtat 307  Q
    |||| || | |||  ||||||||||||||| |||||||||    
T  50100306 aagttaattatttttttataataaggaccggagggagtat 50100345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 2832153 - 2832088
Alignment:
Q  78 aaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||| ||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  2832153 aaaagttcaagtagcacataaatatatttttgaaataaaaaccaaagaagaaacttaacaagagaa 2832088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 327 - 470
Target Start/End: Original strand, 44651380 - 44651524
Alignment:
Q  327 tatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaacca 425  Q
    ||||||||||||| || |||| ||| ||||||||| |||||| |||||||||||||||| |||  |||||||||| |||||| ||||   ||||||||||    
T  44651380 tatgagtattggtctaagtgagatatgtttaattaacatttttcttatgttgcggtttggttcggttggtaaaatgaaaaccacaaatcaaaccaaacca 44651479  T
Q  426 tttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |  ||||||| || ||  ||||| || ||| ||||||||||||||    
T  44651480 tgcggttgagcaagaaaatgatccgattacatccaaacaaaatgc 44651524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 22472850 - 22472767
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   ||||| ||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  22472850 aagattttatcattttctaaaagttcaagtagaacataaatacatttttgaaataaaagacaaataagaaacttaacaagagaa 22472767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 36191574 - 36191485
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacatta---attattctatgaacctaaaaagtcaacttttacttataataagga 294  Q
    |||||||||||||||||||||||| || || |||||||||||   ||||||||||||||| |||||||||| | || |||||||||||||    
T  36191574 gtaagtgatgtatctagtctatatatataacaagatacattaatcattattctatgaaccaaaaaagtcaattgtttcttataataagga 36191485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 306
Target Start/End: Original strand, 48643614 - 48643753
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         || || | |||||| |||||||||||||||||||| ||  | ||||||||||||||| ||||| |||    
T  48643614 gtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaattattcaatgaatcta 48643713  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||| | || ||| |||||||||| | ||||||||    
T  48643714 aaaagtcaattgtttcttgtaataaggactggagggagta 48643753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 48346501 - 48346599
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| |  ||||| ||||||||| ||   || ||||||||||||| || ||||||||    
T  48346501 gtaagtgatgtatctagtctatatttataacaagatacattaattacttaatgaatctaaaaagtaaaaagtttcttataataaggatcggagggagta 48346599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 8764334 - 8764273
Alignment:
Q  203 attgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacc 264  Q
    |||| |||||||||||||||| |||||||||| || ||||||||||||||||||||||||||    
T  8764334 attgtgtaagtgatgtatctaatctatatttataacaagatacattaattattctatgaacc 8764273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 45629506 - 45629567
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaa 138  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  45629506 taaaaattcaagtagtacataaatagatttttgaaagaaaaaacaaagaagaaacttaacaa 45629567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 45914963 - 45914906
Alignment:
Q  86 aagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  45914963 aagtagtacataaatacatttttaaaagaaaaaacaaacaagaaacttaacaagagaa 45914906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 412
Target Start/End: Original strand, 4669980 - 4670076
Alignment:
Q  317 taaaagtttatatgagtattggtttatgtgacataggtttaatta-gcattttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaa 412  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||    |||||||||||||||||||||||   ||  ||||||||||||||||||    
T  4669980 taaaagtttatatgagtattagtttaagtgacataagtttaattattgtttttcttatgttgcggtttgatttggttaataaaataaaaaccgcaaa 4670076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 8769239 - 8769175
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacc 264  Q
    ||||||| |||||||||||||||| |||||||||| || ||||||||||||| ||||||||||||    
T  8769239 ttcattgtgtaagtgatgtatctaatctatatttataacaagatacattaatcattctatgaacc 8769175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 468
Target Start/End: Original strand, 4280785 - 4280861
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaat 468  Q
    ||||||||||||||||||||||  ||||||||||||  |||||||||||||  |||||||||||| ||||||| ||||    
T  4280785 ttggtaaaataaaaaccgcaaaccgaaccaaaccatgcggttgagtaaaaa-atgatctgaatacatccaaaccaaat 4280861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 55467224 - 55467148
Alignment:
Q  394 gtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    ||||||| ||||| |||||  ||||||||||||  ||||||||||||| ||||||||||||| ||||||| ||||||    
T  55467224 gtaaaatcaaaactgcaaaccgaaccaaaccatacggttgagtaaaaaattgatctgaatacatccaaaccaaatgc 55467148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 48169160 - 48169223
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaata 454  Q
    |||||||||| |||||||||||  |||||||||||| ||||| |||||||| ||||||||||||    
T  48169160 ttggtaaaatgaaaaccgcaaaccgaaccaaaccatgtggttaagtaaaaaattgatctgaata 48169223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 167 - 272
Target Start/End: Complemental strand, 2544597 - 2544491
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctata-tttacaataagatacattaattattctatgaacct 265  Q
    |||||||||| |||||||||||||        ||||||||  |||||||||||| | ||||||| |||| || ||||||||| |||||||| ||||||||    
T  2544597 gtccttattacaagaaacaattgactttttagattcattgtataagtgatgtatttggtctataatttataacaagatacatcaattattcaatgaacct 2544498  T
Q  266 aaaaagt 272  Q
    |||||||    
T  2544497 aaaaagt 2544491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 37656742 - 37656677
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| |||||| |||||||||||||||| || |||||||||||||| ||||||||| |||||||||    
T  37656742 taaaagttcaag-agtacataaatatattcttaaaataaaaaacaaagaagaaacttcacaagagaa 37656677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 44664262 - 44664212
Alignment:
Q  225 tctatatttacaataagatacattaattattctatgaacctaaaaagtcaa 275  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  44664262 tctatatttataataagatacattaattattcaatgaacctaaaaaatcaa 44664212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 6061184 - 6061115
Alignment:
Q  203 attgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagt 272  Q
    |||| |||||||||||||||||| |||||||| ||  | || |||||||||||||||||| |||||||||    
T  6061184 attgtgtaagtgatgtatctagtatatatttataacgaaatgcattaattattctatgaatctaaaaagt 6061115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 25919015 - 25918958
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    ||||||||| ||||||||| |||||||||| |||||||||| || |||||||||||||    
T  25919015 ttcaagtagcacataaatacatttttgaaacaaaaaacaaagaaaaaacttaacaaga 25918958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 21562872 - 21562931
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||||||| |||||||||||||||| | || ||| |||||||||||||||    
T  21562872 ttcaagtagtacataaatacatttttgaaataaaaagcgaagaag-aacttaacaagagaa 21562931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 21662948 - 21662884
Alignment:
Q  243 tacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||||| || ||||| ||||||||||||||||| |||||||  ||||||| |||||||||    
T  21662948 tacattaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggagggagtat 21662884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 27054398 - 27054458
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||||||||| |||||||| | |||||||||| |||||||||||||| ||||    
T  27054398 ttcaagtagcacataaatacatttttgatagaaaaaacaaagaagaaacttaacaacagaa 27054458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 451
Target Start/End: Complemental strand, 42362821 - 42362749
Alignment:
Q  379 ggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctga 451  Q
    ||||||||||| |||||||||| |||||||||||   |||||||||||  |||||||||||||  ||||||||    
T  42362821 ggtttgattcagttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaaatgatctga 42362749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 2544491 - 2544436
Alignment:
Q  251 ttattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||| |||||||||||||||||| | || |||||||||||||||| ||||||||    
T  2544491 ttattcaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 2544436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 26758717 - 26758795
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||||||||| |||||||||||  |||||||| |||  |||||||||| || |||||||||||| |||||||| ||||||    
T  26758717 ttggtaaaatcaaaaccgcaaaccgaaccaaatcatgcggttgagtaacaaattgatctgaata-ctccaaaccaaatgc 26758795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 44662233 - 44662316
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   ||||| ||||||||  | |||||||||||||||||||||||||| || ||||||| | |||||||||    
T  44662233 aagattttatcattctttaaaagttcaagtaacatataaatatatttttgaaataaaaaactaagaagaaacctgacaagagaa 44662316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 294
Target Start/End: Complemental strand, 45746577 - 45746482
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataagga 294  Q
    ||||| || |||||||||| |||||||||||||||| ||  ||||| ||||||||||| || || ||||||| |||| | || |||||| ||||||    
T  45746577 attcaatgtgtaagtgatggatctagtctatatttataacgagatatattaattattcaataaatctaaaaaatcaattgtttcttatactaagga 45746482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 52632619 - 52632698
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    ||||||||||||||||||||||   |||||||||||   ||||||||||||  |||| ||||||| ||||||| ||||||    
T  52632619 ttggtaaaataaaaaccgcaaaccaaaccaaaccatgcagttgagtaaaaaagtgatatgaatacatccaaaccaaatgc 52632698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 53441993 - 53442056
Alignment:
Q  243 tacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||| |||||  |||||||||||||||| |||||||  ||||||| ||||||||    
T  53441993 tacattaattattcaatgaatttaaaaagtcaactttttcttataaataggaccggagggagta 53442056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 36330444 - 36330378
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| || ||||||||| ||| |||||||||||||  |||||||||||||| ||||    
T  36330444 taaaaattcaagtagcacgtaaatatatctttaaaataaaaaacaaggaagaaacttaacaaaagaa 36330378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 44651276 - 44651342
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||| |||||||||  ||||| |||||||||||||| ||| ||  |||||||||||    
T  44651276 taaaatttcaagtagcacataaatacgttttttaaataaaaaacaaagaaggaatctaacaagagaa 44651342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 31376222 - 31376173
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||| | || |||||||||||||||| |||||||||    
T  31376222 atgaacctaaaaagtcaaatgtttcttataataaggaccggagggagtat 31376173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 455
Target Start/End: Complemental strand, 46253032 - 46252971
Alignment:
Q  394 gtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    ||||||| |||||||||||  ||||||||||||  |||||| |||||| |||||||||||||    
T  46253032 gtaaaattaaaaccgcaaaccgaaccaaaccatacggttgaataaaaaattgatctgaatac 46252971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 55467403 - 55467345
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||||||| |||||||||| |||||||  | |||||||||||||| ||||    
T  55467403 ttcaagtagtacataaatacatttttgaaagaaaaaac--agaagaaacttaacaaaagaa 55467345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 2566095 - 2566035
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| |||| ||||||||||||| | ||||| |||| |||||||||||||| ||||    
T  2566095 ttcaagtagaacattaatatatttttgatagaaaaagcaaagaagaaacttaacaaaagaa 2566035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 4280627 - 4280667
Alignment:
Q  103 atttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  4280627 atttttgaaataaaaaacaaagaataaacttaacaagagaa 4280667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 10481403 - 10481323
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    ||||||||||| ||   ||||| || |||||| ||||||||| |||||||||||||||| | || |||||| |||||||||    
T  10481403 aagattttatcattttctaaaagttaaagtagcacataaatacatttttgaaataaaaatctaagaagaaatttaacaaga 10481323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 455
Target Start/End: Complemental strand, 25918855 - 25918779
Alignment:
Q  379 ggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    |||||| |||| |||||||||| |||||||||||  |||| |||||||   ||||||||||||  ||||||||||||    
T  25918855 ggtttggttcagttggtaaaatcaaaaccgcaaaccgaacaaaaccatgcagttgagtaaaaaaatgatctgaatac 25918779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 27363212 - 27363276
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagt 272  Q
    |||||||||||||||| |||||||||| || ||||||| ||||||| |  ||||| |||||||||    
T  27363212 gtaagtgatgtatctaatctatatttataacaagatacgttaattacttaatgaatctaaaaagt 27363276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 307
Target Start/End: Complemental strand, 44518142 - 44518034
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    ||||||||  ||| |||||||| | ||||||||||   | ||||||||||||||| || ||||| ||||||||||||  ||| |||||||  |||| |||    
T  44518142 attcattgtctaaatgatgtatttggtctatattttagacaagatacattaattactcaatgaatctaaaaagtcaaagttttcttataaataggatcga 44518043  T
Q  299 agggagtat 307  Q
    || ||||||    
T  44518042 agagagtat 44518034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 455
Target Start/End: Original strand, 45629670 - 45629733
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    |||||||||||||||| |||||  ||||||||||||  ||||||||||||| |||||| ||||||    
T  45629670 ttggtaaaataaaaactgcaaatcgaaccaaaccatgcggttgagtaaaaa-ttgatccgaatac 45629733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 51980493 - 51980437
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattc 256  Q
    ||||||| ||||||||| |||||||| |||||||| ||  |||||||||||||||||    
T  51980493 ttcattgtgtaagtgatatatctagtttatatttataacgagatacattaattattc 51980437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 54122642 - 54122702
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||||||||| |||||| ||| ||||| |||| |||||||||||| ||||||    
T  54122642 ttcaagtagcacataaatacatttttaaaagaaaaagcaaataagaaacttaaccagagaa 54122702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 19899751 - 19899626
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtct--atatttacaataagatacattaattattctatgaacc 264  Q
    ||||||||||||| ||||||||||         ||||||| |||| |||||||||||||||  |||| || || ||||| | |||||||||| |||||||    
T  19899751 gtccttattataaaaaacaattgactctataggttcattgtgtaaatgatgtatctagtctatatatatataacaagatgcgttaattattcaatgaacc 19899652  T
Q  265 taaaaagtcaacttttacttataataa 291  Q
    |||||| |||| | || ||||||||||    
T  19899651 taaaaa-tcaattgtttcttataataa 19899626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 20846718 - 20846854
Alignment:
Q  1 aattaaaaatgtgaacaaaaagcaagtatattatgtaagaaattttaatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaat 100  Q
    ||||||||| ||| ||| |||| || ||||||||||||||||| |      |||| || ||||||||||| ||   ||||| |||||  | ||||||| |    
T  20846718 aattaaaaacgtggacacaaagtaattatattatgtaagaaatat------aaaagattaagattttatcattctctaaaagttcaaacaatacataatt 20846811  T
Q  101 atatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    | |||||| |||||||||| ||| ||||||||| |||||||||    
T  20846812 acattttttaaataaaaaataaagaagaaactttacaagagaa 20846854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 48168992 - 48169043
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaactta 134  Q
    ||||||||||||||||||| |||||||||| ||| | |||| ||||||||||    
T  48168992 ttcaagtagtacataaatacatttttgaaagaaatagcaaagaagaaactta 48169043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 53703831 - 53703882
Alignment:
Q  258 atgaacctaaaaagtcaactttta-cttataataaggaccgaagggagtata 308  Q
    |||||||||||| ||||||||||  |||||||||||||||| ||||||||||    
T  53703831 atgaacctaaaaggtcaacttttttcttataataaggaccggagggagtata 53703882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 8769235 - 8769284
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    |||||| |||||||| ||||||| |||||||||||||||| ||||||||||    
T  8769235 atgaacttaaaaagttaactttt-cttataataaggaccggagggagtata 8769284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 13356787 - 13356869
Alignment:
Q  210 aagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataag 292  Q
    ||||||||||||||||||||||||| |   |||||||||| |||||  |||||  |||||||||||   || |||||||||||    
T  13356787 aagtgatgtatctagtctatatttataccgagatacattacttatttaatgaatttaaaaagtcaatagtttcttataataag 13356869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 441
Target Start/End: Complemental strand, 17144329 - 17144283
Alignment:
Q  395 taaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    ||||||||||||||||||   ||||||||||| ||||||||||||||    
T  17144329 taaaataaaaaccgcaaaccaaaccaaaccatatggttgagtaaaaa 17144283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 51723441 - 51723375
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    |||||||||||| || ||||| ||||||| ||||||||| |||||||  |||| |||| ||||||||    
T  51723441 atacattaattactcaatgaatctaaaaaatcaactttttcttataaataggatcgaatggagtata 51723375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 8355648 - 8355701
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaac 136  Q
    ||||||||| ||||||||| |||||| | | |||||||||| ||||||||||||    
T  8355648 ttcaagtagcacataaatacattttttatagaaaaaacaaagaagaaacttaac 8355701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 28406553 - 28406618
Alignment:
Q  243 tacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    ||||| |||||||| |||||||||||||||||| | || ||| |||  ||||||| ||||||||||    
T  28406553 tacataaattattcaatgaacctaaaaagtcaattgtttcttgtaaataggaccggagggagtata 28406618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 36571427 - 36571503
Alignment:
Q  213 tgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataata 290  Q
    |||||||| |||||||||| || ||| | |||||| | ||| |  |||||| ||||||||||||||||||||||||||    
T  36571427 tgatgtatgtagtctatatata-aatcatatacatcatttaatgaatgaacttaaaaagtcaacttttacttataata 36571503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 412
Target Start/End: Complemental strand, 51660603 - 51660570
Alignment:
Q  379 ggtttgattcaattggtaaaataaaaaccgcaaa 412  Q
    ||||||||||| ||||||||||||||||||||||    
T  51660603 ggtttgattcagttggtaaaataaaaaccgcaaa 51660570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 52865057 - 52864984
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagt 272  Q
    ||||||||| ||| |||| ||| ||||||||||||   ||||||||||| ||||| || ||||| |||||||||    
T  52865057 attcattgcataaatgatatatttagtctatattttagataagatacatcaattactcaatgaatctaaaaagt 52864984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 4190725 - 4190757
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataata 290  Q
    ||||||||||||||||||||||| |||||||||    
T  4190725 atgaacctaaaaagtcaacttttgcttataata 4190757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 4669045 - 4669085
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaa 117  Q
    ||||| ||||||||| ||||||||| |||||||||||||||    
T  4669045 taaaagttcaagtagcacataaatacatttttgaaataaaa 4669085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 9190111 - 9190179
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    ||||||||  ||||||| ||| | ||||||||||||||||  |||||||  |||| |||||||||||||    
T  9190111 agatacatacattattcaatgtatctaaaaagtcaactttctcttataaataggatcgaagggagtata 9190179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 39616958 - 39616910
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||| ||||||||| | || |||||||||||||||| ||||||||    
T  39616958 atgaaccttaaaagtcaaatgtttcttataataaggaccggagggagta 39616910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 45914803 - 45914727
Alignment:
Q  394 gtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    ||||||| |||||||||||   |||||||||||  ||||||||||||  |||||| |||||| ||| ||| ||||||    
T  45914803 gtaaaatcaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaatattgatccgaatacatccgaaccaaatgc 45914727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 8e-47; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 168 - 307
Target Start/End: Original strand, 15239703 - 15239842
Alignment:
Q  168 tccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaa 267  Q
    |||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15239703 tccttattataagaaacaattgattttgttggttcattgtgtaagtgatgtatctagtctatatttacaataagatatattaattattctatgaacctaa 15239802  T
Q  268 aaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  15239803 aaagtcaactttttcttataataaggaccggagggagtat 15239842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 28143788 - 28143895
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  28143788 ttcattgtgtaagtgatgtatctagtctatatttataataagatacattaattattctatgaacctaaaaagtcaactttttcttataataaggaccgga 28143887  T
Q  300 gggagtat 307  Q
    ||||||||    
T  28143888 gggagtat 28143895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 36103436 - 36103543
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |    
T  36103436 ttcattgtgtaagtgatgtatctagactatatttacaataagatacattaattattctatgaacctaaaaaatcaactttttcttataataaggaccgga 36103535  T
Q  300 gggagtat 307  Q
    ||||||||    
T  36103536 gggagtat 36103543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 167 - 309
Target Start/End: Original strand, 40534523 - 40534665
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         |||||||  ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40534523 gtccttattataagaaacaattgatttttttagttcattgtataaatgatgtatctagtctatatttacaataagatacattatttattctatgaaccta 40534622  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    |||||||||||||  |||||||||||||||| |||||||||||    
T  40534623 aaaagtcaactttatcttataataaggaccggagggagtataa 40534665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 167 - 307
Target Start/End: Complemental strand, 45076480 - 45076340
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||| ||||||||||         ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  45076480 gtccttattataaaaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatatgtacaataaaatacattaattattctatgaaccta 45076381  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||| |||| |||| |||||||||||||||| |||||||||    
T  45076380 aaaaatcaattttttcttataataaggaccggagggagtat 45076340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 200 - 297
Target Start/End: Original strand, 23464539 - 23464637
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaa-agtcaacttttacttataataaggaccg 297  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  23464539 ttcattgtataagagatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaataatcaactttttcttataataaggaccg 23464637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 27306799 - 27306710
Alignment:
Q  217 gtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || |||| ||||||    
T  27306799 gtatctagtctatatttacaataagatacattaattattcaatgaacctaaaaagtcaactttttcttataataaagatcgaatggagta 27306710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 28790794 - 28790889
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagaga 142  Q
    |||||||||||  | |||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28790794 aatgtaaaacactatgattttgtatttgtataaaatttcaagtagaacataaatatatttttgaaataaaaaacaaagaagaaacttaacaagaga 28790889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 30759432 - 30759337
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagaga 142  Q
    |||||||||||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||||    
T  30759432 aatgtaaaacattaagattttatcattctataaaatttcaagtagtacataaatatatttttgaaataaaaagcaaacaaaattcttaacaagaga 30759337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 460
Target Start/End: Complemental strand, 30759324 - 30759180
Alignment:
Q  317 taaaagtttatatgagtattggtttatgtgacataggtttaattagca-ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaag 415  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||| || |||||||||||||||||| | |||  |||||||| ||||||  | |||  |    
T  30759324 taaaagtttatacgagtattggtttatgtgacataagttcaattaacatttttcttatgttgcggttcggttctgttggtaaagtaaaaattgtaaatcg 30759225  T
Q  416 aaccaaaccatttggttgagtaaaaagttgatctgaatacctcca 460  Q
    |||||||||||  |||||||||||||  |||||| ||||| ||||    
T  30759224 aaccaaaccatgcggttgagtaaaaaagtgatctaaatacatcca 30759180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 316 - 423
Target Start/End: Complemental strand, 30761286 - 30761178
Alignment:
Q  316 ttaaaagtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaa 414  Q
    |||||||||||||| || ||| |||||||||||||||||| ||||| |||||| |||||||||||||||| |||  |||||||| |||||||||||||      
T  30761286 ttaaaagtttatataagaatttgtttatgtgacataggttcaattatcatttttcttatgttgcggtttggttctgttggtaaagtaaaaaccgcaaact 30761187  T
Q  415 gaaccaaac 423  Q
    |||||||||    
T  30761186 gaaccaaac 30761178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 470
Target Start/End: Complemental strand, 15320261 - 15320111
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacc 419  Q
    ||||| ||| ||||| ||| || |||||||| |||||||||   |||| |||||||||||||||| ||||  |||||||||||||||||||||   ||||    
T  15320261 agtttctataagtatgggtctaggtgacatatgtttaattaatgtttttcttatgttgcggtttggttcagatggtaaaataaaaaccgcaaaccaaacc 15320162  T
Q  420 aaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    ||||||| ||||||||||||||  | |||||||||| ||| ||| ||||||    
T  15320161 aaaccatgtggttgagtaaaaaaattatctgaatacatcctaaccaaatgc 15320111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 167 - 308
Target Start/End: Original strand, 25795248 - 25795389
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         || || | |||||| |||||||||||||||||||| ||  | ||||||||||||||| ||||| |||    
T  25795248 gtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaattattcaatgaatcta 25795347  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    ||||||||| | || ||| |||||||||||| ||||||||||    
T  25795348 aaaagtcaattgtttcttgtaataaggaccggagggagtata 25795389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 297
Target Start/End: Complemental strand, 41464819 - 41464722
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccg 297  Q
    ||||||| ||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||| |||||| |||| | ||  ||||||||| |||||    
T  41464819 ttcattgtgtaagtgatgtatctagtctatatttataacgagatacattaattattcaatgaacttaaaaaatcaattgttttttataataaagaccg 41464722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 291
Target Start/End: Original strand, 9373445 - 9373528
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataa 291  Q
    ||||||||||||| |||||||||||||||| ||||||| |||||||||| |||||  ||||||||||| | || ||||||||||    
T  9373445 gtaagtgatgtatgtagtctatatttacaacaagatacgttaattattcaatgaatttaaaaagtcaattgtttcttataataa 9373528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 11687486 - 11687609
Alignment:
Q  168 tccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaa 267  Q
    |||||||||||||||||||||||        ||| |||| ||||||||||||||||||||||||||| ||  || || ||||||||||| || || ||||    
T  11687486 tccttattataagaaacaattgactttataaatttattgtgtaagtgatgtatctagtctatatttataacgagttatattaattattcaataaatctaa 11687585  T
Q  268 aaagtcaacttttacttataataa 291  Q
    |||||||| | || ||||||||||    
T  11687586 aaagtcaattgtttcttataataa 11687609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 13194190 - 13194281
Alignment:
Q  51 taaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagaga 142  Q
    ||||| || ||||||||||| ||   ||||| || || ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  13194190 taaaagattaagattttatcattctctaaaagtttaattagcacataaatatatttttgaaataaaaagcaaagaagaaacttaacaagaga 13194281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 22014204 - 22014340
Alignment:
Q  1 aattaaaaatgtgaacaaaaagcaagtatattatgtaagaaattttaatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaat 100  Q
    |||||||||  ||||||||||| || |||||||||||||||||||      |||| |  ||||||||||  ||   ||||| || |||||| ||||||||    
T  22014204 aattaaaaacatgaacaaaaagtaattatattatgtaagaaattt------aaaagactaagattttattattctttaaaagtttaagtagcacataaat 22014297  T
Q  101 atatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||  |||||| |||| |||||||||||||||||||    
T  22014298 atatttttgacttaaaaagcaaagaagaaacttaacaagagaa 22014340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 3365318 - 3365412
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataagga 294  Q
    |||||||  ||||||||||||||| |||||||||| || |||||| ||||||||||| ||||| | ||||| |||| | || |||||||||||||    
T  3365318 ttcattgtataagtgatgtatctaatctatatttataacaagatatattaattattcaatgaatcaaaaaaatcaattatttcttataataagga 3365412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 470
Target Start/End: Complemental strand, 12041262 - 12041112
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacc 419  Q
    ||||| |||||||| |||| ||  |||||||| ||||||||   |||| |||||||||||||||| ||   |||||||||| |||||||||||   ||||    
T  12041262 agtttctatgagtaatggtctagatgacatagatttaattaaagtttttcttatgttgcggtttggtttggttggtaaaatgaaaaccgcaaaccaaacc 12041163  T
Q  420 aaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||| ||  |||||||||||||  ||||| |||||| ||||||| ||||||    
T  12041162 aaactatgcggttgagtaaaaaagtgatccgaatacatccaaaccaaatgc 12041112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 41166468 - 41166534
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| | |||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  41166468 taaaagttcaagtagcatataaatatatttttgacataaaaagcaaagaagaaacttaacaagagaa 41166534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 6971708 - 6971579
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||| ||||         ||||||| |||| ||||||||||| |||||||||| || || ||||||||||||| | || ||  ||    
T  6971708 gtccttattataagaaacatttgactttttaggttcattgtgtaaatgatgtatctaatctatatttataacaatatacattaattatacaataaattta 6971609  T
Q  267 aaaagtcaacttttacttataataaggacc 296  Q
    ||||||||| | || |||||||||||||||    
T  6971608 aaaagtcaattgtttcttataataaggacc 6971579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 27311633 - 27311732
Alignment:
Q  213 tgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtataacat 312  Q
    |||| ||||||||||||||||| || ||||||| |||||||||| || || ||||||| |||| | || ||| | |||||||||| |||||||| |||||    
T  27311633 tgatatatctagtctatatttataacaagatacgttaattattcaataaatctaaaaaatcaattgtttcttgtgataaggaccggagggagtacaacat 27311732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 1331307 - 1331369
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaag 139  Q
    ||||| ||||||||| ||||||||||||||||||||||||||  ||| || ||||||||||||    
T  1331307 taaaagttcaagtagcacataaatatatttttgaaataaaaagtaaagaaaaaacttaacaag 1331369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 12873829 - 12873720
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatt-tacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccg 297  Q
    ||||||||| ||| |||||||| ||||||||||| || |  || |||||||||||| |  ||||| ||||||||||||||||| ||||||| ||||| ||    
T  12873829 attcattgcataaatgatgtatttagtctatattctataccaa-atacattaattacttaatgaatctaaaaagtcaactttttcttataaaaaggatcg 12873731  T
Q  298 aagggagtata 308  Q
     ||||||||||    
T  12873730 gagggagtata 12873720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 30761369 - 30761303
Alignment:
Q  76 ataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagaga 142  Q
    |||||| |||||||||||||||||||||||||||||||||||   ||| || |||||||||| ||||    
T  30761369 ataaaaattcaagtagtacataaatatatttttgaaataaaaggtaaagaaaaaacttaacatgaga 30761303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 462
Target Start/End: Original strand, 1331409 - 1331550
Alignment:
Q  327 tatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgatt-----caattggtaaaataaaaaccgcaaaaagaacca 420  Q
    |||||||||| || ||||| |||||| |||||||||  |||| |||||||||||||||| ||     || ||| |||||||||||| |||||   |||||    
T  1331409 tatgagtatttgtctatgtaacatagatttaattagtgtttttcttatgttgcggtttggtttggttcagttgataaaataaaaacggcaaaccaaacca 1331508  T
Q  421 aaccatttggttgagtaaaaagttgatctgaatacctccaaa 462  Q
    |||||| |||||||| |||||  ||||| |||||| ||||||    
T  1331509 aaccatgtggttgaggaaaaaagtgatccgaatacatccaaa 1331550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 297
Target Start/End: Original strand, 38448981 - 38449078
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccg 297  Q
    ||||||| |||||||||||||||  ||||||||||  | ||||| ||| |||||||  |||||||||||||||||| | || |||| |||||| ||||    
T  38448981 ttcattgtgtaagtgatgtatctgatctatatttatcacaagatgcatcaattatttaatgaacctaaaaagtcaattgtttcttaaaataagaaccg 38449078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 470
Target Start/End: Complemental strand, 36500216 - 36500137
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||||||||||||||||| |||   |||||||| ||  |||||||||||||  ||||| |||||| ||||||||||||||    
T  36500216 ttggtaaaataaaaaccgaaaaccaaaccaaactatgcggttgagtaaaaaaatgatccgaatacatccaaacaaaatgc 36500137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 309
Target Start/End: Original strand, 41153153 - 41153263
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    ||||||||| ||| |||||||| | |||||||||   ||  | |||||| ||||| || ||||| ||||||||||||||||| |||||||  |||| ||     
T  41153153 attcattgcataaatgatgtatttggtctatattataaaccaaatacatcaattactcaatgaatctaaaaagtcaactttttcttataaataggatcgg 41153252  T
Q  299 agggagtataa 309  Q
    |||||||||||    
T  41153253 agggagtataa 41153263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 27301261 - 27301196
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagaga 142  Q
    ||||| ||||||||| |||||  || |||||||||||||||| |||| ||||| ||||||||||||    
T  27301261 taaaagttcaagtagcacatagctacatttttgaaataaaaagcaaagaagaagcttaacaagaga 27301196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 462
Target Start/End: Original strand, 13194398 - 13194466
Alignment:
Q  394 gtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaa 462  Q
    |||||||||||||||||||   ||||||||||| ||||||||||||||  ||||| | |||| ||||||    
T  13194398 gtaaaataaaaaccgcaaatcaaaccaaaccatgtggttgagtaaaaacgtgatccggatacatccaaa 13194466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 412
Target Start/End: Original strand, 32646808 - 32646852
Alignment:
Q  368 tcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaa 412  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||    
T  32646808 tcttatgttgcggtttggttcagttgttaaaataaaaaccgcaaa 32646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 441
Target Start/End: Original strand, 1537006 - 1537116
Alignment:
Q  330 gagtattggtttatgtgacataggtttaattagcattttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttg 429  Q
    ||||||| || || |||||||| |||  ||||||||||| ||||||||||||||| |||  ||| ||||||||||||| ||||   ||||||| ||  |     
T  1537006 gagtattcgtctaggtgacataagttccattagcatttt-ttatgttgcggtttggttcggttgttaaaataaaaaccacaaaccaaaccaaatcaagta 1537104  T
Q  430 gttgagtaaaaa 441  Q
    ||||||||||||    
T  1537105 gttgagtaaaaa 1537116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 17763059 - 17763126
Alignment:
Q  76 ataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| |||||||||| || ||| || ||||||||||||||||  |||  ||||||||||||||||||    
T  17763059 ataaattttcaagtagcacgtaagtacatttttgaaataaaaagtaaaagagaaacttaacaagagaa 17763126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 17763190 - 17763265
Alignment:
Q  395 taaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||||||||||||| |||   |||||||| || |||||||||||||| || ||| |||||| ||||||| ||||||    
T  17763190 taaaataaaaaccgtaaatcaaaccaaactatgtggttgagtaaaaaattaatcagaatacatccaaactaaatgc 17763265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 288
Target Start/End: Complemental strand, 12962811 - 12962722
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatattt-acaataagatacattaattattctatgaacctaaaaagtcaacttttacttataa 288  Q
    ||||||||| ||| |||||||| | |||||||||| | |  ||| ||||||||||| || ||||| ||||||||||||||||| |||||||    
T  12962811 attcattgcataaatgatgtatttggtctatattttataccaag-tacattaattactcaatgaatctaaaaagtcaactttttcttataa 12962722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 462
Target Start/End: Complemental strand, 27301163 - 27301021
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacc 419  Q
    ||||| ||||||||||| | || |||||||   ||||||||  ||||| |||||||||| ||||| ||   || ||||||| |||||||||||   ||||    
T  27301163 agtttctatgagtattgatctaggtgacatgaatttaattaatatttttcttatgttgctgtttggtttggtttgtaaaatgaaaaccgcaaaccaaacc 27301064  T
Q  420 aaaccatttggttgagtaaaaagttgatctgaatacctccaaa 462  Q
    |||||||  ||||||| |||||  ||||| |||||| ||||||    
T  27301063 aaaccatgcggttgaggaaaaaagtgatccgaatacatccaaa 27301021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 28249018 - 28249064
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataa 288  Q
    ||||||||||||||  ||||| ||||||||||||||||| |||||||    
T  28249018 atacattaattatttaatgaatctaaaaagtcaactttttcttataa 28249064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 31719848 - 31719783
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| | |||||||||||||| ||||||||| || | || ||||||||||||||||    
T  31719848 taaaagttcaagtagcatataaatatatttttaaaataaaaagcagagaa-aaacttaacaagagaa 31719783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 34572700 - 34572651
Alignment:
Q  93 acataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||| || |||||||||||||||| |||| |||||||||||||||||||    
T  34572700 acataagtacatttttgaaataaaaa-caaagaagaaacttaacaagagaa 34572651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 4410823 - 4410900
Alignment:
Q  203 attgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaactttt 280  Q
    ||||| ||| |||||||| |  |||||||||  || |||||||||||||||  | ||||| |||||||||||||||||    
T  4410823 attgcataaatgatgtatttgatctatattttaaacaagatacattaattacacaatgaatctaaaaagtcaactttt 4410900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 5109426 - 5109361
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||| || ||||| ||||||||| ||||||| |||||||  ||||||| || ||||||    
T  5109426 atacattaattactcaatgaatctaaaaagttaactttttcttataaataggaccggagagagtat 5109361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 468
Target Start/End: Complemental strand, 11377264 - 11377175
Alignment:
Q  379 ggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaat 468  Q
    |||||||||| |||||||||||||||| || |||  ||| ||||| ||  |||||||||||||  ||||| |||||| ||| ||| ||||    
T  11377264 ggtttgattcgattggtaaaataaaaatcgtaaactgaatcaaactatacggttgagtaaaaaagtgatccgaatacatccgaaccaaat 11377175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 15320358 - 15320293
Alignment:
Q  78 aaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||| ||||||||| | ||||||| | |||||||||||||  |||| |||||||||| ||||||||    
T  15320358 aaaagttcaagtagcatataaatacacttttgaaataaaatgcaaagaagaaacttatcaagagaa 15320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 288
Target Start/End: Original strand, 32457255 - 32457344
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataa 288  Q
    ||||||||| ||| |||||||| |||||||||||    | ||||||||| ||||| |  ||||| |||||||||||| |||| |||||||    
T  32457255 attcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaatctaaaaagtcaaatttttcttataa 32457344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 44283605 - 44283670
Alignment:
Q  230 atttacaataagatacatt-aattattctatgaacctaaaaagtcaacttttacttataataagga 294  Q
    ||||| || |||||||||| |||||||| ||||| |||||||||||| | || |||||||||||||    
T  44283605 atttataacaagatacatttaattattcaatgaatctaaaaagtcaattatttcttataataagga 44283670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 6971576 - 6971504
Alignment:
Q  225 tctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccg 297  Q
    |||||||||| || || ||||||||||||| | || ||  ||||||||||| | || ||||||||||||||||    
T  6971576 tctatatttataacaatatacattaattatacaataaatttaaaaagtcaattgtttcttataataaggaccg 6971504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 7943521 - 7943589
Alignment:
Q  239 aagatacattaattattctatgaacctaaaaagtcaa-cttttacttataataaggaccgaagggagta 306  Q
    ||||||||| |||||||| ||||| ||||||||||||  |||| |||||||  ||||||| ||||||||    
T  7943521 aagatacatcaattattcaatgaatctaaaaagtcaatttttttcttataaataggaccggagggagta 7943589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 11051177 - 11051109
Alignment:
Q  77 taaaatttcaagtagtacataaatatattttt-gaaataaaaaa-caaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| | ||||||| |||||| ||||||||||| |||| |||||||||||| ||||||    
T  11051177 taaaagttcaagtagcatataaatacattttttgaaataaaaaaacaaagaagaaacttaacgagagaa 11051109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 11695950 - 11696006
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgat 447  Q
    |||||||||| |||||||||||  |||||||||||| ||||  |||||||| |||||    
T  11695950 ttggtaaaatcaaaaccgcaaaccgaaccaaaccatgtggtcaagtaaaaaattgat 11696006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 36500389 - 36500331
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||||||||| ||||| |||||||||| |||| ||||||||| |||||||||    
T  36500389 ttcaagtagaacataaatacatttt-gaaataaaaagcaaagaagaaactt-acaagagaa 36500331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 36881600 - 36881532
Alignment:
Q  238 taagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||||| || ||| | |||||||||||| |||| |||||||  || |||| ||||||||    
T  36881600 taagatacattaattactcaatgtatctaaaaagtcaaatttttcttataaatagaaccggagggagta 36881532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 3e-46; HSPs: 103)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 167 - 309
Target Start/End: Complemental strand, 54864202 - 54864060
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||||||||||| |         |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54864202 gtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 54864103  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    |||||||||||||| |||||||||||||||| |||||||||||    
T  54864102 aaaagtcaactttttcttataataaggaccggagggagtataa 54864060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 200 - 307
Target Start/End: Complemental strand, 35877419 - 35877312
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |    
T  35877419 ttcattgtgtaagtgatgtatttagactatatttacaataagatacattaattattctatgaatctaaaaagtcaactttttcttataataaggaccgga 35877320  T
Q  300 gggagtat 307  Q
    ||||||||    
T  35877319 gggagtat 35877312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 8347535 - 8347641
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |    
T  8347535 ttcattgtataaatgatgtatctagtctatatttacaataagatacattatttattctatgaacctaaaaagtcaactttttcttataataaggaccgga 8347634  T
Q  300 gggagta 306  Q
    |||||||    
T  8347635 gggagta 8347641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 167 - 309
Target Start/End: Original strand, 43141776 - 43141918
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||||||||||| |         |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43141776 gtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacattaattattctatgaaccta 43141875  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    |||||||||||||| |||||||||| ||||| ||| |||||||    
T  43141876 aaaagtcaactttttcttataataaagaccggaggaagtataa 43141918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 167 - 307
Target Start/End: Original strand, 37895265 - 37895405
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||| ||||         |||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||    
T  37895265 gtccttattataagaaacagttgatttttttggttcattgtataagtgatgtatctagtctacatttacaataaaatacattaattattctatgaatcta 37895364  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  37895365 aaaagtcaactttttcttataataaggaccggagggagtat 37895405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 167 - 307
Target Start/End: Original strand, 36196375 - 36196515
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         ||||||   |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||    
T  36196375 gtccttattataagaaacaattgatttttttggttcattttataagtgatgtatatagtctacatttacaataagatacattaattattctatgaatcta 36196474  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||| |||| |||| |||||||||||||||| |||||||||    
T  36196475 aaaaatcaattttttcttataataaggaccggagggagtat 36196515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 33615917 - 33615778
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||| ||||||||||        |||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||    
T  33615917 gtccttattataaaaaacaattgaatttttagattcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattactcaatgaatcta 33615818  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||| ||||   || |||||||||||||||| ||||||||    
T  33615817 aaaaatcaaaagtttcttataataaggaccggagggagta 33615778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 167 - 305
Target Start/End: Original strand, 43556701 - 43556840
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         ||| ||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43556701 gtccttattataagaaacaattgatttttttagttcgttgtgtaagtgacgtatctagtctacatttacaataagatacattaattattctatgaaccta 43556800  T
Q  267 aaaagtcaa-cttttacttataataaggaccgaagggagt 305  Q
    |||| ||||  |||| |||||||||||||||| |||||||    
T  43556801 aaaaatcaatttttttcttataataaggaccggagggagt 43556840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 200 - 297
Target Start/End: Original strand, 50511288 - 50511385
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccg 297  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||    
T  50511288 ttcattgtgtaagtgatgtatttagactatatttacaataagatacattaattattctataaatctaaagagtcaactttttcttataataaggaccg 50511385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 167 - 307
Target Start/End: Original strand, 33622890 - 33623030
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||||||||||| |         |||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  33622890 gtccttattataagaaacaattaacttttttggttcattgtataggtgatgtatctagtttatatttacaataagatacattaattattctatgaacgta 33622989  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||| |||| ||||||||| ||| || |||||||||    
T  33622990 aaaagtcaattttttcttataatagggatcggagggagtat 33623030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 50511471 - 50511559
Alignment:
Q  201 tcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataat 289  Q
    |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  50511471 tcattgtgtaagggatgtatctagtttatatttacaataagatacattaattattctatgaacctaaagagtcaactttttcttataat 50511559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 35929115 - 35929024
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataa 291  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  35929115 ttcattgtgtaagtgatgtatctaatctatatttataataagatacattaattattctataaacctaaaaaatcaactttttcttataataa 35929024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 167 - 307
Target Start/End: Original strand, 32193485 - 32193625
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         ||||||  |||||| |||||||||||||||||||  |||||| ||||||||||||||||||||| ||    
T  32193485 gtccttattataagaaacaattgacttttttggttcattatgtaagtaatgtatctagtctatatttctaataaggtacattaattattctatgaactta 32193584  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||| ||||| ||| |||||||||||||||| ||| |||||    
T  32193585 aaaaatcaacgttttcttataataaggaccggaggaagtat 32193625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 200 - 297
Target Start/End: Original strand, 52966438 - 52966535
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccg 297  Q
    |||||||  |||||||||||||||||||||||||| || ||||| |||||||||||||||||||| |||||||||| | || ||||||||||||||||    
T  52966438 ttcattgtataagtgatgtatctagtctatatttataacaagatgcattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccg 52966535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 167 - 309
Target Start/End: Original strand, 25756722 - 25756864
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||| ||||||         |||| || |||||||||||||||||||| |||||| ||  ||||||||||||||| | |||||| ||    
T  25756722 gtccttattataagaaataattgactttttaggttcactgtgtaagtgatgtatctagtctctatttataacgagatacattaattatccaatgaacata 25756821  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    ||||||||| | || |||||||||||||||| |||||||||||    
T  25756822 aaaagtcaattgtttcttataataaggaccggagggagtataa 25756864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 200 - 306
Target Start/End: Complemental strand, 31853172 - 31853066
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||   ||||| |||| | || |||||||||| || ||||    
T  31853172 ttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaattaaaaaaatcaattatttcttataataaagatcgaa 31853073  T
Q  300 gggagta 306  Q
    |||||||    
T  31853072 gggagta 31853066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 54673448 - 54673318
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         ||||||  ||||||||||||||||||||||||||| ||  |||| ||||| |||||| |||||||||    
T  54673448 gtccttattataagaaacaattgactttttaggttcattatgtaagtgatgtatctagtctatatttataacgagatgcattacttattcaatgaaccta 54673349  T
Q  267 aaaagtcaacttttacttataataaggaccg 297  Q
    ||||||||| | || ||||||||||||||||    
T  54673348 aaaagtcaaatgtttcttataataaggaccg 54673318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 200 - 295
Target Start/End: Original strand, 52136742 - 52136837
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggac 295  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||  ||||| |||| | || ||||||||||||||    
T  52136742 ttcattgtgtaagtgatgtatttagtctatatttataacaagatacattaattattctatgaactaaaaaaatcaattgtttcttataataaggac 52136837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 25874805 - 25874735
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaa 270  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  25874805 ttcattgtataagtgatgtatctagtctatatttacaataaaatacattaattattctatgaatctaaaaa 25874735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 306
Target Start/End: Complemental strand, 42160070 - 42159972
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||  ||||| |||| | || |||||||||||||||| || |||||    
T  42160070 gtaagtgatgtatttagtctatatttataacaagatacattaattattctatgaacaaaaaaaatcaattatttcttataataaggaccggagtgagta 42159972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 24100851 - 24100758
Alignment:
Q  213 tgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||| || | || ||||||||||||| || ||||||||    
T  24100851 tgatgtatctagtctatatttataacaagatacattaattattcaatgaatctaaaaagttaattatttcttataataaggatcggagggagta 24100758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 52278025 - 52278101
Alignment:
Q  215 atgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataa 291  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| || |||||||||||| |||| ||||||||||    
T  52278025 atgtatttagtctatatttacaataagatatattaattattctataaatctaaaaagtcaattttttcttataataa 52278101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 302
Target Start/End: Complemental strand, 4418235 - 4418100
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||| ||||||         ||||||| ||||||||||||| |||| |||||||| || || ||||||||||||||||||||||  |    
T  4418235 gtccttattataagaaaaaattgattttttaggttcattgtgtaagtgatgtatttagtttatatttataacaaaatacattaattattctatgaactaa 4418136  T
Q  267 aaaagtcaacttttacttataataaggaccgaaggg 302  Q
    |||| |||| | || |||||||||||||||| ||||    
T  4418135 aaaaatcaattgtttcttataataaggaccggaggg 4418100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 297
Target Start/End: Original strand, 19350655 - 19350750
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccg 297  Q
    ||||||| |||||||| ||||||||||| |||||| ||||||| ||||||| |||||||| ||||||||||||||||||||  || ||||||||||||    
T  19350655 ttcattgtgtaagtga-gtatctagtctttatttataataaga-acattaagtattctataaacctaaaaagtcaacttttttttttaataaggaccg 19350750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 40592754 - 40592827
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagt 272  Q
    ||||||||  ||||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||    
T  40592754 attcattgtataagtgatgtatctagtttatatttataacaagatacattaattattctataaacctaaaaagt 40592827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 167 - 307
Target Start/End: Original strand, 29686410 - 29686550
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||| ||||         ||||||| |||| |||||||||||||||||||||| || || ||||||||||||| | |||||  ||    
T  29686410 gtccttattataagaaacatttgactttttaggttcattgtgtaaatgatgtatctagtctatatttataacaatatacattaattatacaatgaattta 29686509  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||| | || | || |||||||||||||||| |||||||||    
T  29686510 aaaaattaattgtttcttataataaggaccggagggagtat 29686550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 307
Target Start/End: Original strand, 27587246 - 27587396
Alignment:
Q  157 atttcatccagtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattc 256  Q
    ||||| ||| ||||||||||||||||||||||||        ||| |||   ||| ||||||||||||| |||||||| ||  |||||||||||||||||    
T  27587246 atttcctccggtccttattataagaaacaattgactttttagatttattatataaatgatgtatctagtgtatatttataacgagatacattaattattc 27587345  T
Q  257 tatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
     ||||||||||||| | || | || ||||||||||||| || ||| |||||    
T  27587346 aatgaacctaaaaaataaattatttcttataataaggatcggaggtagtat 27587396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 1205188 - 1205131
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattc 256  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  1205188 attcattgtctaagtgatgtatctagtctatatttataataagatacattaattattc 1205131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 425
Target Start/End: Original strand, 17845264 - 17845384
Alignment:
Q  305 tataacatttattaaaagtttatatgagtattggtttatgtgacataggtttaattagca-ttttcttatgttgcggtttgattcaattggtaaaataaa 403  Q
    |||| ||||| |||||||||| ||||||||||||||||||||| ||| ||| ||||| || ||||||||| ||||||||| |||   ||| |||||||||    
T  17845264 tatatcattttttaaaagtttttatgagtattggtttatgtgagata-gttcaattaacatttttcttatattgcggtttaatttggttgataaaataaa 17845362  T
Q  404 aaccgcaaaaagaaccaaacca 425  Q
    |||||||||  ||| |||||||    
T  17845363 aaccgcaaatcgaatcaaacca 17845384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 21069376 - 21069436
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||    
T  21069376 ttcaagtagtacataaatacatttttgaaacaaaaagcaaagaagaaacttaacaagagaa 21069436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 27743520 - 27743580
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||    
T  27743520 ttcaagtagtacataaatacatttttgaaagaaaaagcaaagaagaaacttaacaagagaa 27743580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 41325715 - 41325775
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| ||||    
T  41325715 ttcaagtagtacataaatacatttttgaaagaaaaaacaaagaagaaacttaacaaaagaa 41325775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 296
Target Start/End: Original strand, 56491115 - 56491211
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggacc 296  Q
    |||||||  ||||| |||||||||||||||||||| ||  || |||||||||||||| |||||| ||||||||||  | || |||||||||||||||    
T  56491115 ttcattgtataagtaatgtatctagtctatatttataacgaggtacattaattattcaatgaacttaaaaagtcatttgttgcttataataaggacc 56491211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 199 - 314
Target Start/End: Complemental strand, 1140971 - 1140856
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    |||||||| ||||||||||||||| ||||||||||| || || |||||| |||||||| ||||| ||||||| |||| | ||  || |||||| |||||     
T  1140971 attcattgtgtaagtgatgtatctggtctatatttataacaaaatacatcaattattcaatgaatctaaaaattcaattgtttattctaataatgaccgg 1140872  T
Q  299 agggagtataacattt 314  Q
    | ||||||||| ||||    
T  1140871 aaggagtataatattt 1140856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 9813499 - 9813606
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    ||||||| ||||||||||||||||||||||||||| ||  |||| ||||||| || | || ||||||||||||||| | || ||||| ||||||| || |    
T  9813499 ttcattgtgtaagtgatgtatctagtctatatttataacgagatgcattaatcatgcaataaacctaaaaagtcaattgttgcttattataaggatcgga 9813598  T
Q  300 gggagtat 307  Q
    || |||||    
T  9813599 ggaagtat 9813606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 18536429 - 18536363
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| ||||||||| |||||||||||||||| | || |||||||||||||||||||    
T  18536429 taaaagttcaagtagcacataaatacatttttgaaataaaaagcgaagaagaaacttaacaagagaa 18536363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 23558952 - 23559046
Alignment:
Q  203 attgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccg 297  Q
    |||| |||| |||||||||||||||||||||| ||  ||||| ||||||||| | |||| |||||||| |||| | ||||||||||||| |||||    
T  23558952 attgtgtaactgatgtatctagtctatatttataacgagatatattaattatccaatgagcctaaaaaatcaattgttacttataataaagaccg 23559046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 320 - 455
Target Start/End: Complemental strand, 11031318 - 11031182
Alignment:
Q  320 aagtttatatgagtattggtttatgtgacataggtttaattagcatt-ttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaac 418  Q
    |||||||| |||||  ||||||| | |||||||||  ||||| || | |||||||||||| ||||| |||| ||| |||||| |||||||||||  ||||    
T  11031318 aagtttatgtgagtgctggtttaggggacataggtgcaattaacactcttcttatgttgcagtttggttcagttgataaaatgaaaaccgcaaactgaac 11031219  T
Q  419 caaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    ||||| || || |||||||||||  ||||| ||||||    
T  11031218 caaactatgtgattgagtaaaaaagtgatccgaatac 11031182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 438
Target Start/End: Original strand, 3999235 - 3999294
Alignment:
Q  379 ggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaa 438  Q
    ||||| ||||| ||||||||||||||||||||||  |||||||||||| |||||||||||    
T  3999235 ggtttaattcagttggtaaaataaaaaccgcaaaccgaaccaaaccatgtggttgagtaa 3999294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 53225729 - 53225796
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    ||||||||||||||| ||||| |||||||||||| |||| |||||||  ||||||| |||||||||||    
T  53225729 atacattaattattcaatgaatctaaaaagtcaattttttcttataaataggaccggagggagtataa 53225796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 48338657 - 48338723
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||  ||||||||| |||||||||||||||| |||| |||||||||||||| ||||    
T  48338657 taaaagttcaagtaacacataaatacatttttgaaataaaaagcaaagaagaaacttaacaatagaa 48338723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 410
Target Start/End: Original strand, 13715130 - 13715215
Alignment:
Q  326 atatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgca 410  Q
    |||||||||||||| |||||||||||  |||||||||  ||||  ||||||||||||||| ||   ||||||||||||||||||||    
T  13715130 atatgagtattggtatatgtgacatatatttaattagtgttttatttatgttgcggtttggtttggttggtaaaataaaaaccgca 13715215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 22210872 - 22210803
Alignment:
Q  222 tagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataa 291  Q
    |||||||||||||||| |||||| ||||||||||| |||||  ||||||||||| | || ||||||||||    
T  22210872 tagtctatatttacaacaagatatattaattattcaatgaatttaaaaagtcaattgtttcttataataa 22210803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 35014597 - 35014654
Alignment:
Q  86 aagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||| ||||||||| |||||| |||||||||||||  |||||||||||||||||||    
T  35014597 aagtagcacataaatacattttttaaataaaaaacaatgaagaaacttaacaagagaa 35014654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 48685210 - 48685271
Alignment:
Q  365 ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccat 426  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||||   |||||||||||    
T  48685210 tttttttatgttgcggtttgattcggttggtaaaataaaaaccgcaaatcaaaccaaaccat 48685271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 468
Target Start/End: Original strand, 4689092 - 4689239
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacc 419  Q
    ||||| |||||||||| || || |||||||| |||||||||   |||| |||||||||| ||||| |||  ||||||| ||||||||||||||   ||||    
T  4689092 agtttttatgagtatttgtctaggtgacataagtttaattattgtttttcttatgttgcagtttgtttcggttggtaatataaaaaccgcaaaccaaacc 4689191  T
Q  420 aaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaat 468  Q
    |||||| ||||||| | ||||| |||||   ||||  ||||||||||||    
T  4689192 aaacca-ttggttgtggaaaaaattgattcaaatatatccaaacaaaat 4689239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 18399343 - 18399399
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaag 139  Q
    ||||||||| ||||||||| |||||||| ||||||| |||| |||||||||||||||    
T  18399343 ttcaagtagaacataaatacatttttgagataaaaatcaaagaagaaacttaacaag 18399399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 18881826 - 18881748
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagaga 142  Q
    ||||||||||| ||  ||||||||||   ||||||||||||||||||||||||| |||| ||||  |||||||||||||||||    
T  18881826 aagattttatcattctataaaatttc---tagtacataaatatatttttgaaattaaaatcaaa-gagaaacttaacaagaga 18881748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 20986719 - 20986779
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||||| |||||||||| |||||||||| |||||  ||| |||||||||||||||||||    
T  20986719 ttcaagtaatacataaataaatttttgaaagaaaaaggaaagaagaaacttaacaagagaa 20986779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 48685070 - 48685130
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||||||| || |||||||||||||||||||| || ||| ||||||||||||    
T  48685070 ttcaagtagcacataaaaatgtttttgaaataaaaaacaaagaataaatttaacaagagaa 48685130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 41260421 - 41260488
Alignment:
Q  76 ataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||| |||||||||  |||||| | |||||||||||||||| |||| ||||||||| |||||||||    
T  41260421 ataaaagttcaagtagcccataaacagatttttgaaataaaaagcaaagaagaaactttacaagagaa 41260488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 48602296 - 48602221
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaa 135  Q
    ||||||||||| ||   ||||| ||||||||| ||||||| ||||||||||||||||||  ||| |||||||||||    
T  48602296 aagattttatcattatctaaaagttcaagtagcacataaacatatttttgaaataaaaagtaaagaagaaacttaa 48602221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 49641116 - 49641211
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagaga 142  Q
    ||||||||| |  ||||||||||| ||   ||||| ||||||||  ||||||||| ||||||||| | |||| |||| ||||||||||||||||||    
T  49641116 aatgtaaaagactaagattttatcattatctaaaagttcaagtaacacataaatacatttttgaagtgaaaagcaaaaaagaaacttaacaagaga 49641211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 9058529 - 9058579
Alignment:
Q  93 acataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||| |||| |||||||||||||||| |||||||||||||||||||    
T  9058529 acatacatacatttatgaaataaaaaacaaagaagaaacttaacaagagaa 9058579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 22019938 - 22020064
Alignment:
Q  161 catccagtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatg 260  Q
    ||||| |||||||||||||| ||||||| |        |||||||  ||||||||||| |||| |||||||||| ||  |||| ||||||||||   ||     
T  22019938 catccggtccttattataagtaacaattaactttttagattcattctgtaagtgatgtgtctaatctatatttataacgagatgcattaattatctaatt 22020037  T
Q  261 aacctaaaaagtcaacttttacttata 287  Q
    || |||||||||||||| |||||||||    
T  22020038 aatctaaaaagtcaactgttacttata 22020064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 4688995 - 4689060
Alignment:
Q  78 aaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||| ||||||||| || |||||| |||||||| || ||||||||| |||||| ||||||||||||    
T  4688995 aaaagttcaagtagcacctaaatacatttttgagatgaaaaacaaagaagaaaattaacaagagaa 4689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 29686447 - 29686398
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||| | || |||||||||||||||| |||||||||    
T  29686447 atgaacctaaaaagtcaaatgtttcttataataaggaccggagggagtat 29686398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 44111801 - 44111894
Alignment:
Q  213 tgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||| | |||||||||   || ||||||||| ||||| || ||||| ||||||||||||||||| |||||||  | ||||| ||||||||    
T  44111801 tgatgtatttggtctatattctaaagaagatacatcaattactcaatgaatctaaaaagtcaactttttcttataaataagaccggagggagta 44111894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 48293018 - 48292941
Alignment:
Q  393 ggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||||||| |||||||||||   ||||||||||| |||||||| |||||  ||||| |||||| ||||||| ||||||    
T  48293018 ggtaaaatgaaaaccgcaaaccaaaccaaaccatgtggttgaggaaaaaagtgatccgaatacatccaaaccaaatgc 48292941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 321 - 441
Target Start/End: Original strand, 49641245 - 49641366
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacc 419  Q
    ||||| |||||||||| || || ||||||||  ||||||| | ||||| ||||||| | |||||| ||   ||||||||||||||||||||||   |||     
T  49641245 agtttctatgagtattagtctaggtgacataaatttaattggtatttttcttatgtcgtggtttggtttggttggtaaaataaaaaccgcaaaccaaact 49641344  T
Q  420 aaaccatttggttgagtaaaaa 441  Q
    ||||||  ||||||||||||||    
T  49641345 aaaccacgtggttgagtaaaaa 49641366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 56491137 - 56491072
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagt 305  Q
    |||||||||| |||| | |||||||||||||||||| |  | |||||||||||||||| |||||||    
T  56491137 agatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccggagggagt 56491072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 4418198 - 4418246
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||||| |||| |||| |||||||||||||||| ||||||||    
T  4418198 atgaacctaaaaaatcaattttttcttataataaggaccggagggagta 4418246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 4642766 - 4642826
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||| |||| ||||||||| |||||||| | ||||| |||| |||||||||||||||||||    
T  4642766 ttcatgtagcacataaatacatttttgatagaaaaagcaaagaagaaacttaacaagagaa 4642826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 17845175 - 17845247
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaa 119  Q
    |||||||||||  | ||||||||| ||  |||||||||||| || ||||||| ||||||||| ||||||||||    
T  17845175 aatgtaaaacactaggattttatcattccataaaatttcaaatattacataagtatattttttaaataaaaaa 17845247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 28460842 - 28460798
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaatta 253  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||    
T  28460842 taagtgatgtatttagtctatatttacaacaagataaattaatta 28460798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 412
Target Start/End: Complemental strand, 35232967 - 35232875
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaa 412  Q
    ||||| |||| ||||| || || |||||||| ||||||||||  |||| |||||||||||||||  |||  ||| ||||||||||||||||||    
T  35232967 agtttctatgtgtatttgtctaggtgacataagtttaattagtgtttttcttatgttgcggtttagttcggttgataaaataaaaaccgcaaa 35232875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 36106234 - 36106174
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||| || ||||||||| ||||||||||||||||  ||| |||||||||||||| ||||    
T  36106234 ttcaaggagcacataaatacatttttgaaataaaaagtaaagaagaaacttaacaaaagaa 36106174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 441
Target Start/End: Original strand, 41260521 - 41260652
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgc----------ggtttgattcaattggtaaaataaaaaccgc 409  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||  |||| ||||||||||          ||||||||||  ||||||||||||||||| |    
T  41260521 agtttctatgagtattggtttagatgacataagtttaattagtgtttttcttatgttgcagtttggtttggtttgattcggttggtaaaataaaaaccac 41260620  T
Q  410 aaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    |||  ||||| ||||||  |||||||||||||    
T  41260621 aaattgaaccgaaccatgcggttgagtaaaaa 41260652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 46471714 - 46471806
Alignment:
Q  51 taaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| || ||||||||||| ||   ||||| || |||||  ||||||||| ||||||||||||||||  ||| || ||||||||||||||||    
T  46471714 taaaagattaagattttatcattctctaaaagttgaagtatcacataaatacatttttgaaataaaaagtaaagaaaaaacttaacaagagaa 46471806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 307
Target Start/End: Complemental strand, 48361158 - 48361050
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    ||||||||| ||| |||||||| | |||||||||    | || |||||| ||||| || ||||| |||||||||||| |||| |||||||  |||||||     
T  48361158 attcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaagtcaaatttttcttataaataggaccgg 48361059  T
Q  299 agggagtat 307  Q
    |||||||||    
T  48361058 agggagtat 48361050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 52136746 - 52136698
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||||||| || |||| |||||||||||||||| ||||||||    
T  52136746 atgaacctaaaaagttaattttttcttataataaggaccggagggagta 52136698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 5122151 - 5122084
Alignment:
Q  76 ataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||| ||||||||| |||||||||  ||||| ||||||||| |||| ||  |||||||||||||||    
T  5122151 ataaaagttcaagtagcacataaatacgttttttaaataaaaagcaaagaaagaacttaacaagagaa 5122084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 14867063 - 14867146
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   |||||  |||||||  ||||||| ||||||| ||||||||||  ||| |||||||||||||||||||    
T  14867063 aagattttatcattccctaaaagatcaagtaacacataaaaatattttagaaataaaaagtaaagaagaaacttaacaagagaa 14867146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 19150720 - 19150657
Alignment:
Q  243 tacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||| || || || ||||||||||||||||| |||||||  ||||||| ||||||||    
T  19150720 tacattaattactcaataaatctaaaaagtcaactttttcttataaataggaccgtagggagta 19150657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 21069551 - 21069629
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||||||||| ||||| |||||  |||| |||||||  ||||||||||||| |||||| |||||| ||||||| ||||||    
T  21069551 ttggtaaaatcaaaac-gcaaaccgaacaaaaccatgcggttgagtaaaaaattgatccgaatacatccaaactaaatgc 21069629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 462
Target Start/End: Complemental strand, 23449575 - 23449504
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaa 462  Q
    |||||||||| ||||| |||||  ||||||||||||  |||||||||||||  ||||| |||||| ||||||    
T  23449575 ttggtaaaatcaaaactgcaaactgaaccaaaccatgcggttgagtaaaaaaatgatccgaatacatccaaa 23449504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 24100886 - 24100941
Alignment:
Q  239 aagatacattaattattctatgaacctaaaaagtcaacttttacttataataagga 294  Q
    |||||||||||||||||| ||||| ||||||||| || | || |||||||||||||    
T  24100886 aagatacattaattattcaatgaatctaaaaagttaattatttcttataataagga 24100941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 441
Target Start/End: Complemental strand, 25686073 - 25686026
Alignment:
Q  394 gtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    |||||||||||||||||||   ||||||||||| ||||||||||||||    
T  25686073 gtaaaataaaaaccgcaaaccaaaccaaaccatgtggttgagtaaaaa 25686026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 25756758 - 25756711
Alignment:
Q  259 tgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||||||||| | || |||||||||||||||| ||||||||    
T  25756758 tgaacctaaaaagtcaattatttcttataataaggaccggagggagta 25756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 28815880 - 28815923
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagg 301  Q
    ||||||||||||||||||||||| |||||||||  |||||||||    
T  28815880 atgaacctaaaaagtcaacttttgcttataatagtgaccgaagg 28815923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 32223081 - 32223018
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    ||||| ||||||||| ||| ||||| | ||||||||||||||  ||| ||||||||||||||||    
T  32223081 taaaagttcaagtagcacacaaatacacttttgaaataaaaagtaaagaagaaacttaacaaga 32223018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 45828500 - 45828567
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    |||||||||||| || ||||| ||||||| |||| |||| |||||||  ||||||||||||| |||||    
T  45828500 atacattaattactcaatgaatctaaaaaatcaattttttcttataaataggaccgaagggaatataa 45828567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 48338831 - 48338910
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||||||||| |||||||||||   |||||||||||  ||||||| |||||  ||||| |||||| ||||||| ||||||    
T  48338831 ttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagcaaaaaagtgatccgaatacatccaaactaaatgc 48338910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 23449748 - 23449694
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaaca 137  Q
    ||||||||| ||||||||| |||||||| | | |||||||| |||||||||||||    
T  23449748 ttcaagtagcacataaatacatttttgatagataaaacaaagaagaaacttaaca 23449694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 28148087 - 28148145
Alignment:
Q  85 caagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||| ||||||||| |||||||| | ||||| |||| ||||||||||||| |||||    
T  28148087 caagtagcacataaatacatttttgatagaaaaagcaaagaagaaacttaacaggagaa 28148145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 37895320 - 37895254
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||| | |||| | ||||||| ||||| |||||| || |||||||||||||||| ||||||||    
T  37895320 agatacatcacttatacaatgaaccaaaaaaatcaactgtttcttataataaggaccggagggagta 37895254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 304
Target Start/End: Complemental strand, 47943833 - 47943728
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatattt-acaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccg 297  Q
    ||||||||| ||| |||||||| |||||||||||| | |  ||| ||||||||||| || || || |||||||||||| |||| | |||||  |||||||    
T  47943833 attcattgcataaatgatgtatttagtctatattttataccaag-tacattaattactcaattaatctaaaaagtcaattttttcatataaataggaccg 47943735  T
Q  298 aagggag 304  Q
    |||||||    
T  47943734 aagggag 47943728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 48293226 - 48293133
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| || ||||||||||  ||   ||||| ||||||||| ||||||||| ||||||||||   ||| |||| ||||||||||| |||||||    
T  48293226 aatgtaaaagattaagattttattattttctaaaagttcaagtagcacataaatacatttttgaaa---aaagcaaagaagaaacttaataagagaa 48293133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 53934961 - 53935026
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||  ||| |||||| || |||||||||    
T  53934961 taaaagttcaagtagtacataaatacatttttg-aataaaaagaaaataagaaatttgacaagagaa 53935026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 1564830 - 1564781
Alignment:
Q  81 atttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaa 130  Q
    |||| |||||| ||||||||| |||||||| |||||||||||| ||||||    
T  1564830 attttaagtagcacataaatacatttttgatataaaaaacaaagaagaaa 1564781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 3094363 - 3094412
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||||||||  ||||||||  ||||| |||||||||    
T  3094363 atgaacctaaaaagtcaacttttggttataatagtgaccggagggagtat 3094412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 17316588 - 17316629
Alignment:
Q  265 taaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||| ||||||| |||||||||||||||| ||||||||    
T  17316588 taaaaagttaactttttcttataataaggaccggagggagta 17316629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 38208387 - 38208314
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataa 240  Q
    ||||||| ||||||||||||||||         |||||||  ||||||||||||||||||||||||| ||||||    
T  38208387 gtccttaatataagaaacaattgacatttttagttcattgtttaagtgatgtatctagtctatattttcaataa 38208314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 54273547 - 54273474
Alignment:
Q  368 tcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    ||||||||||||||||| |||  ||| ||||||||||||||||||   |||| || |||  |||||||||||||    
T  54273547 tcttatgttgcggtttggttcggttgctaaaataaaaaccgcaaaccaaaccgaatcatgcggttgagtaaaaa 54273474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 1100943 - 1100899
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaaggg 302  Q
    |||||||||||||||||| | || |||||||||||||||| ||||    
T  1100943 atgaacctaaaaagtcaaatgtttcttataataaggaccggaggg 1100899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 5970344 - 5970276
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    ||||||||  ||||||| ||| | ||||||||||||||||   ||||||  ||||||||||||||||||    
T  5970344 agatacatacattattcaatgtatctaaaaagtcaactttcttttataaataggaccgaagggagtata 5970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 7086232 - 7086280
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||||||| | || |||||||||||||||| | ||||||    
T  7086232 atgaacctaaaaagtcaaatgtttcttataataaggaccggaaggagta 7086280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 7783947 - 7783892
Alignment:
Q  87 agtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| ||||||||||||||||  ||| || ||||||||||||||||    
T  7783947 agtagaacataaatacatttttgaaataaaaagtaaagaa-aaacttaacaagagaa 7783892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 8484993 - 8485053
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| | ||||||| ||| |||| | ||||| |||| |||||||||||||||||||    
T  8484993 ttcaagtagcatataaatacattattgatagaaaaagcaaagaagaaacttaacaagagaa 8485053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 384
Target Start/End: Complemental strand, 18881740 - 18881660
Alignment:
Q  305 tataacatttattaaaagtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttg 384  Q
    ||||||| || |||||||| | ||| | ||||||||| ||  ||| ||||| |||||||||||| ||||||||||||||||    
T  18881740 tataacaatttttaaaagtgtctataactattggtttgtgctacacaggttcaattagcattttacttatgttgcggtttg 18881660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 463
Target Start/End: Original strand, 29233237 - 29233309
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaac 463  Q
    |||||||||| |||||| ||||  ||||||||||||  ||||||| | ||| |||||| |||||| |||||||    
T  29233237 ttggtaaaattaaaaccacaaaccgaaccaaaccatgcggttgagaagaaaattgatccgaatacatccaaac 29233309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 32193522 - 32193474
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||| |||||||||| | || |||||||||||||||| ||||||||    
T  32193522 atgaaccaaaaaagtcaattgtttcttataataaggaccggagggagta 32193474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 45983812 - 45983868
Alignment:
Q  379 ggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgag 435  Q
    ||||||||||  |||||||||| |||||||||||   ||||||||||| ||||||||    
T  45983812 ggtttgattcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgtggttgag 45983868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 167 - 307
Target Start/End: Complemental strand, 34604919 - 34604779
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         |||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34604919 gtccttattataagaaacaattgatttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacattatttattctatgaaccta 34604820  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  34604819 aaaagtcaactttttcttataataaggaccggagggagtat 34604779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 167 - 309
Target Start/End: Original strand, 13831885 - 13832027
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||||||||||| |         |||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13831885 gtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatatagtctatatttacaataagatacattaattattctatgaaccta 13831984  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    |||||||||||||| |||||||||||||||| |||||||||||    
T  13831985 aaaagtcaactttttcttataataaggaccggagggagtataa 13832027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 45372843 - 45372704
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||| |||||||||        ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45372843 gtccttattataagtaacaattgacttttttgattcaatgtgtaagtgatgtatctagtctatattttcaataagatacattaattattctatgaaccta 45372744  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||| |||||| ||||||||| ||||||||    
T  45372743 aaaagtcaactttttcttatattaaggaccggagggagta 45372704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 164 - 307
Target Start/End: Original strand, 44579900 - 44580043
Alignment:
Q  164 ccagtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaac 263  Q
    |||||| |||||||||||||||||| |        ||| ||||  ||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  44579900 ccagtctttattataagaaacaattaacttttttgatttattgtataagtaatatatctagtctatatttacaataagatacattaattattctatgaac 44579999  T
Q  264 ctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
     |||||||||||||||| |||||||||||||| |||||||||||    
T  44580000 ttaaaaagtcaactttttcttataataaggactgaagggagtat 44580043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 167 - 309
Target Start/End: Complemental strand, 29690574 - 29690432
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||||||||||| |         |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29690574 gtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttataataagatacattaattattctatgaaccta 29690475  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    ||||||||  |||| ||||||||||||||   |||||||||||    
T  29690474 aaaagtcagttttttcttataataaggactagagggagtataa 29690432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 167 - 309
Target Start/End: Complemental strand, 43292706 - 43292564
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||| ||||         ||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |    
T  43292706 gtccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaaccaa 43292607  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    ||||||||| | || |||||||||||||||| |||||||||||    
T  43292606 aaaagtcaattgtttcttataataaggaccggagggagtataa 43292564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 167 - 307
Target Start/End: Original strand, 7548507 - 7548648
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacct- 265  Q
    |||||||||||||||||||||| |         ||||||| ||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||     
T  7548507 gtccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatgcattaattattctatgaaccta 7548606  T
Q  266 aaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||| ||||||||| |||||||||||||||| |||||||||    
T  7548607 aaaaaatcaactttttcttataataaggaccggagggagtat 7548648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 167 - 308
Target Start/End: Complemental strand, 35584021 - 35583880
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||||||||||| |         |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35584021 gtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacattaattattctatgaaccta 35583922  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    ||| ||||  |||| |||||||||||||| | ||||||||||    
T  35583921 aaaggtcatatttttcttataataaggactggagggagtata 35583880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 199 - 307
Target Start/End: Complemental strand, 34745363 - 34745255
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    |||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| | || ||||||||||||||||     
T  34745363 attcattatgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccgg 34745264  T
Q  299 agggagtat 307  Q
    |||||||||    
T  34745263 agggagtat 34745255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 167 - 307
Target Start/End: Original strand, 43932059 - 43932199
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         |||||||   || ||||||||||| |||||||||| || |||||||||||||||||| ||||| |||    
T  43932059 gtccttattataagaaacaattgactttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaattattcaatgaatcta 43932158  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||| | || |||||||||||||||| |||||||||    
T  43932159 aaaagtcaattgtttcttataataaggaccggagggagtat 43932199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 9633171 - 9633077
Alignment:
Q  215 atgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    |||||||||||||||||||| || |||||||||||||||| | ||||| |||||| ||||| | || ||||||||||||||||||  ||||||||    
T  9633171 atgtatctagtctatatttataacaagatacattaattatacaatgaatctaaaacgtcaattgtttcttataataaggaccgaaatgagtataa 9633077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 40645716 - 40645813
Alignment:
Q  163 tccagtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatg 260  Q
    ||||||||||||||||||||||| ||||         ||||||  ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  40645716 tccagtccttattataagaaacatttgactttttaagttcattatgtaagtgatgtatctagtctatatttataacaagatacattaattattctatg 40645813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 200 - 288
Target Start/End: Original strand, 38298544 - 38298632
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataa 288  Q
    ||||||| ||||||||||||||||| ||||||||| ||  ||||||||||||||||| ||||||||||||| |||| | || |||||||    
T  38298544 ttcattgtgtaagtgatgtatctagcctatatttataacgagatacattaattattcaatgaacctaaaaaatcaattgtttcttataa 38298632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 43409877 - 43409984
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    |||||||  ||||| |||||||||||||||||||| ||  || |||||||||||||| ||||||| |||||||||  | || || ||||||||||||| |    
T  43409877 ttcattgtataagtaatgtatctagtctatatttataacgaggtacattaattattcaatgaaccgaaaaagtcatttgttgctaataataaggaccgga 43409976  T
Q  300 gggagtat 307  Q
    ||||||||    
T  43409977 gggagtat 43409984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 307
Target Start/End: Original strand, 9550151 - 9550259
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    |||||||| |||||||||||||||||||||||||||  |  |||||||||| |||||| || ||  ||||||||||| | || |||||||||||| || |    
T  9550151 attcattgggtaagtgatgtatctagtctatatttattacgagatacattagttattcaataaatttaaaaagtcaattgtttcttataataaggcccaa 9550250  T
Q  299 agggagtat 307  Q
    |||| ||||    
T  9550251 agggggtat 9550259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 38494341 - 38494253
Alignment:
Q  203 attgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataa 291  Q
    |||| ||||||| |||||||| | |||||||| || |||||||||||||||||||||||||  |||||||||| | || ||||||||||    
T  38494341 attgtgtaagtggtgtatctaatttatatttataacaagatacattaattattctatgaacaaaaaaagtcaattatttcttataataa 38494253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 3129418 - 3129352
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| ||||||||| |||||||||||||||  |||| |||||||||||||||||||    
T  3129418 taaaagttcaagtagcacataaatacatttttgaaataaaatgcaaagaagaaacttaacaagagaa 3129352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 24681851 - 24681791
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||||||||| |||||||| | |||||||||| |||||||||||||||||||    
T  24681851 ttcaagtagcacataaatacatttttgatagaaaaaacaaagaagaaacttaacaagagaa 24681791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 5356889 - 5356798
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaag 300  Q
    ||||||||||||||| || ||||||| ||  |||| | |||||||| | ||||| |||||||||||| | || |||||||||||||||||||    
T  5356889 taagtgatgtatctaatccatatttataacgagatgcgttaattatccaatgaatctaaaaagtcaattgttgcttataataaggaccgaag 5356798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 24599807 - 24599677
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||| |||||||||||||||        ||||||||  ||| |||||||||||  ||||||||| ||| | |||||||| |||||| |||||  ||    
T  24599807 gtccttataataagaaacaattgattttttagattcattgtataactgatgtatctaacctatatttataatgaaatacattatttattcaatgaattta 24599708  T
Q  267 aaaagtcaacttttacttataataaggaccg 297  Q
    ||||||||| | || |||||||||| |||||    
T  24599707 aaaagtcaattatttcttataataaagaccg 24599677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 28441783 - 28441849
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| |||||||   ||||||||||||||||||||| |||||||||||||| ||||    
T  28441783 taaaagttcaagtagcacataaaaccatttttgaaataaaaaacaaagaagaaacttaacaaaagaa 28441849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 307
Target Start/End: Original strand, 7693075 - 7693183
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    ||||||||| ||| |||||||| ||||||||||||   |  | |||||||||||| || ||||| |||||||||||| |||| |||||||  |||||||     
T  7693075 attcattgcataaatgatgtatttagtctatattttataccaaatacattaattactcaatgaatctaaaaagtcaattttttcttataaataggaccgg 7693174  T
Q  299 agggagtat 307  Q
    | |||||||    
T  7693175 aaggagtat 7693183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 18755087 - 18755027
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||||||||| ||| |||||| |||||| ||| |||||||||||||||||||    
T  18755087 ttcaagtagaacataaatacattattgaaagaaaaaataaagaagaaacttaacaagagaa 18755027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 35794578 - 35794678
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    ||||| |||||| || | ||| |||| || ||||||||||||||| || ||||| ||||||||| ||   || |||||||||||||||| ||||||||||    
T  35794578 taagtaatgtatttaatttatgtttataacaagatacattaattactcaatgaatctaaaaagtaaaaagtttcttataataaggaccggagggagtata 35794677  T
Q  309 a 309  Q
    |    
T  35794678 a 35794678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 11219458 - 11219537
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||||||||| |||||||||||  |||||||||||| || |||||||||||  ||||| |||||| ||| ||| ||||||    
T  11219458 ttggtaaaatcaaaaccgcaaaccgaaccaaaccatgtgattgagtaaaaaaatgatccgaatacatccgaaccaaatgc 11219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 15452435 - 15452372
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    ||||| ||||||||| || |||||| ||||||||||||||| ||||| |||||| |||||||||    
T  15452435 taaaagttcaagtagcacgtaaatacatttttgaaataaaacacaaagaagaaatttaacaaga 15452372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 43409899 - 43409832
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||| |||| | |||||||||||||||||| |  | |||||||||||||||| |||||||||    
T  43409899 agatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccggagggagtat 43409832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 470
Target Start/End: Complemental strand, 24681676 - 24681598
Alignment:
Q  392 tggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    ||||||||| || ||||||||  ||||||||||||  ||||||| ||||| |||||| |||||| ||||||| ||||||    
T  24681676 tggtaaaatcaagaccgcaaaccgaaccaaaccatacggttgagcaaaaaattgatccgaatacatccaaaccaaatgc 24681598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 321 - 425
Target Start/End: Original strand, 27674931 - 27675036
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacc 419  Q
    ||||| ||||||||||||| || | |||||| ||||||| | |||||| |||||||||||||||| ||   ||||||||||  ||||||||||   ||||    
T  27674931 agtttctatgagtattggtctaggggacatatgtttaatgaacatttttcttatgttgcggtttggtttggttggtaaaatttaaaccgcaaaccaaacc 27675030  T
Q  420 aaacca 425  Q
    ||||||    
T  27675031 aaacca 27675036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 28072752 - 28072679
Alignment:
Q  368 tcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    ||||||||||| ||||| |||| ||| ||||||||||||||||||   ||||||| |||  |||||||||||||    
T  28072752 tcttatgttgctgtttggttcagttgctaaaataaaaaccgcaaaccaaaccaaaacatgcggttgagtaaaaa 28072679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 43932096 - 43932047
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||| | || |||||||||||||||| |||||||||    
T  43932096 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 43932047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 1271453 - 1271513
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||||||| || ||| |||  |||| |||| |||||||||||||||||||    
T  1271453 ttcaagtagtacataaatacatgttttaaagtaaaagcaaagaagaaacttaacaagagaa 1271513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 441
Target Start/End: Original strand, 13325759 - 13325835
Alignment:
Q  365 ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    ||||||||| |||||||||| ||   ||| |||||| |||||||||||  ||||||||||||  |||||||||||||    
T  13325759 ttttcttatattgcggtttggtttggttgataaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtaaaaa 13325835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 41624790 - 41624850
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaa 269  Q
    |||||||||||| ||||||||||||| || || |||| |||||||||| || |||||||||    
T  41624790 taagtgatgtatttagtctatatttataacaacatacgttaattattcaatcaacctaaaa 41624850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 35149750 - 35149817
Alignment:
Q  239 aagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||||  | || || ||||||| ||||||||| |||||||  ||||||||||||||||    
T  35149750 aagatacattaattacacaataaatctaaaaaatcaactttttcttataaataggaccgaagggagta 35149817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 288
Target Start/End: Complemental strand, 10839869 - 10839780
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatt-tacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataa 288  Q
    ||||||||| ||| |||||||| | ||||||||| || |  ||| |||||||||||||| ||||| |||||||||||| |||| |||||||    
T  10839869 attcattgcataaatgatgtatttggtctatattctataccaag-tacattaattattcaatgaatctaaaaagtcaattttttcttataa 10839780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 14185624 - 14185574
Alignment:
Q  93 acataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||||||||||||| || ||| ||| ||||||||||||||||    
T  14185624 acataaatacatttttgaaataacaagcaaccaataaacttaacaagagaa 14185574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 39151998 - 39152044
Alignment:
Q  97 aaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||| ||||||||| ||| |||||||||||||||||||    
T  39151998 aaatacatttttgtaataaaaaataaagaagaaacttaacaagagaa 39152044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 45372814 - 45372856
Alignment:
Q  266 aaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    |||||||||| | ||||||||||||||||||| ||||||||||    
T  45372814 aaaaagtcaattgttacttataataaggaccggagggagtata 45372856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 12193223 - 12193166
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    ||||||||| ||||||||| |||||||| | ||||| |||| || |||||||||||||    
T  12193223 ttcaagtagcacataaatacatttttgatagaaaaagcaaagaaaaaacttaacaaga 12193166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 12437651 - 12437594
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    ||||||||| ||||||||| |||||||| | ||||| |||| || |||||||||||||    
T  12437651 ttcaagtagcacataaatacatttttgatagaaaaagcaaagaaaaaacttaacaaga 12437594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 13831922 - 13831873
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||| ||||||| || | || ||||||||||||||||||||||||||    
T  13831922 atgaaccaaaaaagttaattgtttcttataataaggaccgaagggagtat 13831873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 34604864 - 34604933
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    |||||||| | |||| | ||||||| ||||| |||| | || |||||||||||||||| |||||||||||    
T  34604864 agatacatcacttatacaatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagtataa 34604933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 45180144 - 45180111
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatattt 233  Q
    ||||||| ||||||||||||||||||||||||||    
T  45180144 ttcattgtgtaagtgatgtatctagtctatattt 45180111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 307
Target Start/End: Complemental strand, 1223229 - 1223121
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    ||||||||| ||| | |||||| | ||||||||||   | |||||||||||||||  | ||||| |||||||||||  |||| |||||||  | |||||     
T  1223229 attcattgcataaattatgtatttggtctatatttttgacaagatacattaattacacaatgaatctaaaaagtcacttttttcttataaatatgaccgg 1223130  T
Q  299 agggagtat 307  Q
    |||||||||    
T  1223129 agggagtat 1223121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 9420629 - 9420697
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaa 267  Q
    ||||||||  ||||| |||||||| ||||||||||| ||  || |||||||||||||| | ||||||||    
T  9420629 attcattgtataagtaatgtatctggtctatatttataacgaggtacattaattattcaaagaacctaa 9420697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 11219275 - 11219335
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||  ||||||||| |||||||| | ||||||| || |||||||||||||| ||||    
T  11219275 ttcaagtaacacataaatacatttttgatagaaaaaaccaagaagaaacttaacaaaagaa 11219335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 12659941 - 12659901
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaatta 361  Q
    ||||| ||||||||||| ||||||||||||| |||||||||    
T  12659941 agtttctatgagtattgatttatgtgacatatgtttaatta 12659901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 14113294 - 14113358
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||||||| ||| | |||||||||||  ||||||||| ||  | ||||||||||||||    
T  14113294 atacattaattattcaatgtatctaaaaagtcattttttacttagaaatatgaccgaagggagta 14113358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 35583966 - 35584034
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    |||||||| | |||| | ||||||| ||||||| || | || |||||||||||||||| ||||||||||    
T  35583966 agatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccggagggagtata 35584034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 38926036 - 38925988
Alignment:
Q  365 ttttcttatgttgcggtttgattcaa-ttggtaaaataaaaaccgcaaa 412  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||| ||||    
T  38926036 ttttcctatgttgcggtttggttcaagttggtaaaataaaaaccacaaa 38925988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 167 - 308
Target Start/End: Complemental strand, 20502225 - 20502084
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||||||||||| |         ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  20502225 gtccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaatcta 20502126  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    |||||||||||||| |||||||||||||||| ||| ||||||    
T  20502125 aaaagtcaactttttcttataataaggaccggaggaagtata 20502084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 200 - 309
Target Start/End: Complemental strand, 29451998 - 29451889
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| |    
T  29451998 ttcattgtgtaagtgatgtatctagtatatatttacaataagatacattaattattctatgaatctaaaaaatcaactttttcttataataaggaccgga 29451899  T
Q  300 gggagtataa 309  Q
    ||||||||||    
T  29451898 gggagtataa 29451889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 200 - 306
Target Start/End: Complemental strand, 38978847 - 38978741
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| | |    
T  38978847 ttcattgtgtaagtgatgtatctagtctatatttacaataagatatattaattattctatgaatctaaaaagtcaactttttcttataataaggactgga 38978748  T
Q  300 gggagta 306  Q
    |||||||    
T  38978747 gggagta 38978741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 24173426 - 24173559
Alignment:
Q  163 tccagtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaa 262  Q
    ||||||||||||||||||||| ||||||         ||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||    
T  24173426 tccagtccttattataagaaataattgatttttttagttcattgtgtaagtgatgtatctaatctatattttcaataagatacattaattattctataaa 24173525  T
Q  263 cctaaaaagtcaacttttacttataataaggacc 296  Q
    | |||||||||||||||| |||||||||||||||    
T  24173526 cttaaaaagtcaactttttcttataataaggacc 24173559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 199 - 306
Target Start/End: Original strand, 32455181 - 32455288
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| |||||||||||||| |     
T  32455181 attcattgtggaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacttaaaatgttaactttttcttataataaggactgg 32455280  T
Q  299 agggagta 306  Q
    ||||||||    
T  32455281 agggagta 32455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 27600895 - 27600758
Alignment:
Q  168 tccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaa 267  Q
    |||||||||||||||| ||||||        |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  27600895 tccttattataagaaataattgatttttttgattcattgtgtaagtgatttatctaatctatatttacaataagatacattaattattctatgaacttaa 27600796  T
Q  268 aaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||| |||| |||||||||| ||||| ||||||||    
T  27600795 aaagtcaa-tttttcttataataaagaccggagggagta 27600758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 35205057 - 35204921
Alignment:
Q  171 ttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaa 270  Q
    ||||||||||||||||||||         ||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35205057 ttattataagaaacaattgacttttttagttcattgtgtaagggatgtatctagactatatttacaataagatacattaattattctatgaacctaaaaa 35204958  T
Q  271 gtcaacttttacttataataaggaccgaagggagtata 308  Q
     ||||||||| ||||||||||| || | ||||||||||    
T  35204957 -tcaactttttcttataataagtacaggagggagtata 35204921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 35212102 - 35212238
Alignment:
Q  171 ttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaa 270  Q
    ||||||||||||||||||||         ||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35212102 ttattataagaaacaattgacttttttagttcattgtgtaagggatgtatctagactatatttacaataagatacattaattattctatgaacctaaaaa 35212201  T
Q  271 gtcaacttttacttataataaggaccgaagggagtata 308  Q
     ||||||||| ||||||||||| || | ||||||||||    
T  35212202 -tcaactttttcttataataagtacaggagggagtata 35212238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 167 - 307
Target Start/End: Complemental strand, 7537159 - 7537019
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||| ||||||||||         ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  7537159 gtccttattataaaaaacaattgatttttttggttcattgtgtaagtgatgtatctagtatatatttacgataagatacattaattattctattaaccta 7537060  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    | ||||||| |||| ||||||||||| |||| |||||||||    
T  7537059 agaagtcaattttttcttataataagaaccggagggagtat 7537019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 5355689 - 5355550
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||| ||||         ||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  5355689 gtccttattataagaaacagttgacttttttagttcattgtgtaagtgatgtatttagtttatatttacaataagatacattaattattctatgaaccta 5355590  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||| || ||||||| |||| ||||| || || ||||||||    
T  5355589 aaatgttaactttttcttagaataaagatcggagggagta 5355550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 33247344 - 33247441
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||||||| ||| |||||    
T  33247344 taagtgatatatctagtctatatttacaataagatatattaattatt-tatgaacctaaaaagtcaactttttcttataacaaggaccggaggaagtat 33247441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 200 - 297
Target Start/End: Original strand, 29874360 - 29874457
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccg 297  Q
    |||||||  |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  29874360 ttcattgtttaagtgatgtatctagtctatatttttaataaaatacattaattattctatgaacctaaaaagttaactttttcttatattaaggaccg 29874457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 200 - 295
Target Start/End: Original strand, 29002785 - 29002880
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggac 295  Q
    ||||||| |||||||||||||||||||||||||| | |||||||| ||||||||||| || |||||||||| ||||||||| ||||||||||||||    
T  29002785 ttcattgtgtaagtgatgtatctagtctatattttcgataagatatattaattattccataaacctaaaaaatcaactttttcttataataaggac 29002880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 19211377 - 19211278
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| || |||||  |||||||||||   || |||||||||||||||| |||||||||    
T  19211377 gtaagtgatgtatctagtctatatttacaacaagatacattaattactcaatgaatataaaaagtcaaaagtttcttataataaggaccggagggagtat 19211278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 166 - 304
Target Start/End: Original strand, 9630244 - 9630382
Alignment:
Q  166 agtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacct 265  Q
    ||||||||||||||||||||||| |         ||||||| ||||||||| ||| |||  |||||||||||||||||||||||||||||||||||| ||    
T  9630244 agtccttattataagaaacaattaatttttttggttcattgtgtaagtgatatatttagattatatttacaataagatacattaattattctatgaatct 9630343  T
Q  266 aaaaagtcaacttttacttataataaggaccgaagggag 304  Q
    ||||| |||| ||||  ||||||||| ||||| ||||||    
T  9630344 aaaaaatcaattttttgttataataaagaccggagggag 9630382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 26690092 - 26690188
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| |||||| ||||||||||| ||  ||||| ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  26690092 aatgttaaacattaagattttatcattctataaactttgaagtagtatataaatatatttttgaaataaaaaataaagaagaaacttaacaagagaa 26690188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 26959824 - 26959920
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| |||||| ||||||||||| ||  ||||| ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  26959824 aatgttaaacattaagattttatcattctataaactttgaagtagtatataaatatatttttgaaataaaaaataaagaagaaacttaacaagagaa 26959920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 316 - 462
Target Start/End: Original strand, 26690204 - 26690350
Alignment:
Q  316 ttaaaagtttatatgagtattggtttatgtgacataggtttaattagca-ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaa 414  Q
    |||||||||| |||||||||||  |||||||||||||||| ||||| || ||||||||||||| | |||| ||| ||| || |||||||||| |||||      
T  26690204 ttaaaagtttctatgagtattgagttatgtgacataggttcaattaacatttttcttatgttgtgttttggttcgatt-gttaaataaaaactgcaaact 26690302  T
Q  415 gaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaa 462  Q
    ||||||||||||  |||||||||||||  |||||| ||||| ||||||    
T  26690303 gaaccaaaccatgcggttgagtaaaaaagtgatctaaatacatccaaa 26690350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 316 - 462
Target Start/End: Original strand, 26959936 - 26960082
Alignment:
Q  316 ttaaaagtttatatgagtattggtttatgtgacataggtttaattagca-ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaa 414  Q
    |||||||||| |||||||||||  |||||||||||||||| ||||| || ||||||||||||| | |||| ||| ||| || |||||||||| |||||      
T  26959936 ttaaaagtttctatgagtattgagttatgtgacataggttcaattaacatttttcttatgttgtgttttggttcgatt-gttaaataaaaactgcaaact 26960034  T
Q  415 gaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaa 462  Q
    ||||||||||||  |||||||||||||  |||||| ||||| ||||||    
T  26960035 gaaccaaaccatgcggttgagtaaaaaagtgatctaaatacatccaaa 26960082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 13932599 - 13932460
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||| ||||||         |||| || |||||||||||||||||||| |||||| ||  ||||||||||||||| | |||||| ||    
T  13932599 gtccttattataagaaataattgactttttaggttcactgtgtaagtgatgtatctagtctctatttataacgagatacattaattatccaatgaacata 13932500  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||| | || ||||||| |||||||| ||||||||    
T  13932499 aaaagtcaattgtttcttataacaaggaccggagggagta 13932460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 167 - 309
Target Start/End: Original strand, 73794 - 73936
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||| ||||||||||        |||||||| |||| ||||||||||| ||| | |||| ||  ||||| ||||||||||| ||||||||     
T  73794 gtccttattataaaaaacaattgactttttagattcattgtgtaaatgatgtatctactctttgtttataacgagatatattaattattcaatgaacctg 73893  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    ||||||||| | || |||||||||| ||||| |||||||||||    
T  73894 aaaagtcaattgtttcttataataaagaccggagggagtataa 73936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 33970713 - 33970802
Alignment:
Q  213 tgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaaggg 302  Q
    |||||||| |||| |||||||  ||||| ||||||||||||||||||||| ||||| | ||||||||| |||||||||||||||| ||||    
T  33970713 tgatgtatttagtatatatttttaataaaatacattaattattctatgaaactaaacaatcaactttttcttataataaggaccggaggg 33970802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 410
Target Start/End: Original strand, 11403011 - 11403099
Alignment:
Q  323 tttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgca 410  Q
    ||||||||||||| ||| || |||| ||| ||||||||| |||||| |||||||||||||||| |||  ||||||||||||||||||||    
T  11403011 tttatatgagtatcggtctaggtgagatatgtttaattaacatttttcttatgttgcggtttggttcggttggtaaaataaaaaccgca 11403099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 307
Target Start/End: Complemental strand, 13279024 - 13278884
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||| ||||        ||| |||| |||||||||||||||| | |||||||| ||  |||| |||||| ||||| || ||||||    
T  13279024 gtccttattataagaaacagttgactttttagatttattgtgtaagtgatgtatctaatttatatttataacgagatgcattaactattcaataaaccta 13278925  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||| |||| | || ||||||| || |||||||||||||||    
T  13278924 aaaaatcaattgtttcttataacaaagaccgaagggagtat 13278884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 2796593 - 2796526
Alignment:
Q  76 ataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||||||||||||| ||||||||| ||||||||||||||||  ||| |||||| ||||||||||||    
T  2796593 ataaaatttcaagtagcacataaatacatttttgaaataaaaagtaaagaagaaatttaacaagagaa 2796526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 2802754 - 2802687
Alignment:
Q  76 ataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||||||||||||| ||||||||| ||||||||||||||||  ||| |||||| ||||||||||||    
T  2802754 ataaaatttcaagtagcacataaatacatttttgaaataaaaagtaaagaagaaatttaacaagagaa 2802687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 365 - 469
Target Start/End: Complemental strand, 2796447 - 2796343
Alignment:
Q  365 ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaaca 464  Q
    ||||||||||||| |||||||||   ||||||||||||||||| ||||  ||| ||||||||  |||| ||||||||  ||||| |||||| | ||||||    
T  2796447 ttttcttatgttgtggtttgatttggttggtaaaataaaaaccacaaactgaaacaaaccatgcggttaagtaaaaaagtgatccgaatacattcaaaca 2796348  T
Q  465 aaatg 469  Q
    |||||    
T  2796347 aaatg 2796343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 365 - 469
Target Start/End: Complemental strand, 2802608 - 2802504
Alignment:
Q  365 ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaaca 464  Q
    ||||||||||||| |||||||||   ||||||||||||||||| ||||  ||| ||||||||  |||| ||||||||  ||||| |||||| | ||||||    
T  2802608 ttttcttatgttgtggtttgatttggttggtaaaataaaaaccacaaactgaaacaaaccatgcggttaagtaaaaaagtgatccgaatacattcaaaca 2802509  T
Q  465 aaatg 469  Q
    |||||    
T  2802508 aaatg 2802504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 6718876 - 6718948
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaa 119  Q
    |||||||||||  ||||||||||| ||  ||||||||| ||||||| |||||||||| |||||||||||||||    
T  6718876 aatgtaaaacactaagattttatcattctataaaattttaagtagtgcataaatatacttttgaaataaaaaa 6718948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 316 - 470
Target Start/End: Original strand, 6718984 - 6719135
Alignment:
Q  316 ttaaaagtttatatgagtattggttt-atgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaa 413  Q
    |||||||||| ||||||||| ||||| ||||||||||| || ||||| |||||| ||||| || ||||||| ||     ||||||||||||| ||||||     
T  6718984 ttaaaagtttttatgagtatcggttttatgtgacatagattcaattaacatttttcttattttacggtttggtt-----ggtaaaataaaaaacgcaaac 6719078  T
Q  414 agaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
     |||||||||||| ||| ||||||||||  | || ||||||| || |||| ||||||    
T  6719079 cgaaccaaaccatgtggctgagtaaaaatgtaatatgaatacatcaaaaccaaatgc 6719135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 12378881 - 12378785
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| |  ||||||||||| ||   ||||| || |||||| ||||||||| |||||||||||||||| |||| |||||||||||||| ||||    
T  12378881 aatgtaaaatactaagattttatcattctttaaaagtttaagtagcacataaatacatttttgaaataaaaagcaaagaagaaacttaacaaaagaa 12378785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 455
Target Start/End: Original strand, 36568199 - 36568263
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    |||||||||| |||||||||||  |||||||||||| ||||||||| |||| |||||||||||||    
T  36568199 ttggtaaaatcaaaaccgcaaactgaaccaaaccatgtggttgagttaaaaattgatctgaatac 36568263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 41455366 - 41455445
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||||||||| | |||||||||  |||||||||||| |||||||||||||| |||||| |||||| ||| ||| ||||||    
T  41455366 ttggtaaaatcataaccgcaaatcgaaccaaaccatgtggttgagtaaaaaattgatcagaatacatccgaaccaaatgc 41455445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 35318572 - 35318656
Alignment:
Q  215 atgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    |||||||||||| ||||||| ||  ||||||||||||||||| || ||| |||||| |||| | || ||| ||||||||||||||    
T  35318572 atgtatctagtccatatttataacgagatacattaattattcaataaacttaaaaaatcaattgtttcttgtaataaggaccgaa 35318656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 36568035 - 36568094
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||||||| |||||||||| ||||||| || |||| ||||||||||||||    
T  36568035 ttcaagtagtacataaatacatttttgaaagaaaaaac-aagaagacacttaacaagagaa 36568094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 39052840 - 39052936
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||| || || ||||||||||| |   |||||| ||||||||| |||||||||||||||| ||||||||   ||| |||||| ||||||||||||    
T  39052840 aatgtataagattaagattttatcatactataaaagttcaagtagcacataaatatatttttaaaataaaatgtaaagaagaaatttaacaagagaa 39052936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 321 - 470
Target Start/End: Original strand, 2423220 - 2423375
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgatt-----caattggtaaaataaaaaccgcaaaaa 414  Q
    ||||| |||||||||| || || ||||||||| ||||||||   |||| |||||||||||||||| ||     |  |||||||||| |||||||||||      
T  2423220 agtttttatgagtatttgtctaggtgacatagatttaattaatgtttttcttatgttgcggtttggtttggttcggttggtaaaatgaaaaccgcaaatc 2423319  T
Q  415 gaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
     ||||||||||| ||||||||  ||||  |||||  ||||| ||||||||||||||    
T  2423320 aaaccaaaccatgtggttgagggaaaaagtgatcaaaatacatccaaacaaaatgc 2423375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 18432403 - 18432462
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaac 136  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| |||| || |||||||||    
T  18432403 taaaagttcaagtagcacataactatatttttgaaataaaaagcaaagaaaaaacttaac 18432462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 22553654 - 22553737
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   ||||| ||||||||  ||||||| ||||||| ||||||||||  ||| |||||||||||||||||||    
T  22553654 aagattttatcattctctaaaagttcaagtaacacataaaaatattttagaaataaaaagtaaagaagaaacttaacaagagaa 22553737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 321 - 438
Target Start/End: Original strand, 35727383 - 35727499
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacc 419  Q
    ||||| ||||| ||||||| ||||||||||  |||||||| |  |||| | |||||||||||||||||   ||| ||||| ||||||||||||  |||||    
T  35727383 agtttctatgaatattggtatatgtgacat--gtttaatttgtgtttttcgtatgttgcggtttgatttggttgataaaacaaaaaccgcaaactgaacc 35727480  T
Q  420 aaaccatttggttgagtaa 438  Q
    ||| ||| |||||||||||    
T  35727481 aaatcatgtggttgagtaa 35727499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 40331268 - 40331185
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   ||||| ||||||||| ||||||||| ||||||  ||||||||||||  ||||||||||||| |||||    
T  40331268 aagattttatcattctctaaaagttcaagtagcacataaatacatttttacaataaaaaacaatgaagaaacttaacaggagaa 40331185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 17225205 - 17225159
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggag 304  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  17225205 atgaacctaaaaagtcaacttttgcttataataacgaccggagggag 17225159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 42920803 - 42920741
Alignment:
Q  81 atttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||| |||| |||||||| |||||||| |||||||  ||| |||||||||||||||||||    
T  42920803 atttcaaatagtgcataaatacatttttgatataaaaagtaaagaagaaacttaacaagagaa 42920741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 438
Target Start/End: Original strand, 23418425 - 23418498
Alignment:
Q  365 ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaa 438  Q
    |||||||||||||||||||| |||  | ||||||||||||||| ||||  |||||||||||   ||||||||||    
T  23418425 ttttcttatgttgcggtttggttcggtcggtaaaataaaaacctcaaaccgaaccaaaccacgcggttgagtaa 23418498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 405
Target Start/End: Complemental strand, 34111445 - 34111368
Alignment:
Q  328 atgagtattggtttatgtgacataggtttaattagcattttcttatgttgcggtttgattcaattggtaaaataaaaa 405  Q
    ||||||||| ||||| |||| ||| |||||||||   |||||||||||||||||||| ||   |||||||||||||||    
T  34111445 atgagtattagtttaggtgatatatgtttaattaattttttcttatgttgcggtttggtttggttggtaaaataaaaa 34111368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 317 - 441
Target Start/End: Original strand, 40692853 - 40692977
Alignment:
Q  317 taaaagtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaag 415  Q
    |||||||||  || |||||| || || |||||||| ||||||||||  |||| ||||||| |||||||| ||   |||||||||||||||||| |||       
T  40692853 taaaagtttccataagtatttgtctaggtgacatatgtttaattagtgtttttcttatgt-gcggtttggtttggttggtaaaataaaaaccgtaaacta 40692951  T
Q  416 aaccaaaccatttggttgagtaaaaa 441  Q
    |||||||||||  |||||||||||||    
T  40692952 aaccaaaccataaggttgagtaaaaa 40692977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 455
Target Start/End: Original strand, 1681662 - 1681746
Alignment:
Q  371 tatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    |||||||||||||| |||| ||| |||||||||||| |||||   || ||||||||  |||||||| ||||  ||||||||||||    
T  1681662 tatgttgcggtttggttcagttgctaaaataaaaactgcaaactaaatcaaaccatacggttgagtgaaaatatgatctgaatac 1681746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 7313928 - 7313976
Alignment:
Q  259 tgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||||||| |||||||||  ||||| |||||||||    
T  7313928 tgaacctaaaaagtcaacttttgcttataatagtgaccggagggagtat 7313976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 7591265 - 7591185
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    ||||||||||| ||   ||||| ||||||||| ||||||| | ||||||||||||||||  ||| |||||| |||||||||    
T  7591265 aagattttatcattatctaaaagttcaagtagcacataaagacatttttgaaataaaaagtaaagaagaaatttaacaaga 7591185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 8680642 - 8680690
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||||||| | || |||||||||||||||| ||||||||    
T  8680642 atgaacctaaaaagtcaaatgtttcttataataaggaccggagggagta 8680690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 13128290 - 13128226
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagt 272  Q
    |||||||||| |||||||||||||||| ||  ||||| ||||||||||| || ||| ||||||||    
T  13128290 gtaagtgatgcatctagtctatatttataacgagatatattaattattcaataaacataaaaagt 13128226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 13789818 - 13789882
Alignment:
Q  243 tacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||| ||||| || |||||||||||||| |||||||  || |||| |||||||||    
T  13789818 tacattaattattcaatgaatctgaaaagtcaactttttcttataaatagaaccggagggagtat 13789882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 26007155 - 26007075
Alignment:
Q  63 attttatctttgaataaaatttcaagtagtacataaata----tatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    |||||||| ||  |||||||||||||||||||||| |||    ||||||||||||||||||||||  | |||||||||||||    
T  26007155 attttatcattctataaaatttcaagtagtacatacataagaatatttttgaaataaaaaacaaa-gataaacttaacaaga 26007075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 31075407 - 31075323
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaa-caaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   ||||| ||||||||  ||||||||| | |||||||||||||||  ||| |||||||||||||||||||    
T  31075407 aagattttatcattctctaaaagttcaagtaacacataaatacacttttgaaataaaaaagtaaagaagaaacttaacaagagaa 31075323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 25495585 - 25495647
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaata 454  Q
    |||||||||| |||||||||||  ||||||||||||  |||||||||||||  |||||||||||    
T  25495585 ttggtaaaattaaaaccgcaaat-gaaccaaaccatgcggttgagtaaaaaaatgatctgaata 25495647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 34881106 - 34881031
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaa-caaacaagaaactta 134  Q
    ||||||||||| ||   ||||| ||||||| | ||||||||||| ||||||||||||||| |||| ||||||||||    
T  34881106 aagattttatcattctctaaaaattcaagtggcacataaatatacttttgaaataaaaaagcaaagaagaaactta 34881031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 38394490 - 38394427
Alignment:
Q  243 tacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||| ||||| |||||||||||| |||| |||||||  |||| || ||||||||    
T  38394490 tacattaattattcaatgaatctaaaaagtcaattttttcttataaataggatcggagggagta 38394427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 441
Target Start/End: Original strand, 2589406 - 2589532
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattc-----aattggtaaaataaaaaccgcaaaaa 414  Q
    ||||| ||||||||||||  ||  |||||||  |||||||||  |||| ||||||||||||||||||||     | |||||||||||||||| | |||      
T  2589406 agtttctatgagtattggcgtagatgacatatatttaattagtgtttttcttatgttgcggtttgattcggttcagttggtaaaataaaaactggaaacc 2589505  T
Q  415 gaaccaaaccatttggttgagtaaaaa 441  Q
    ||||||||||||  ||| |||||||||    
T  2589506 gaaccaaaccatgcggtagagtaaaaa 2589532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 5240287 - 5240221
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||||||||| ||| | ||||||| |||| |||| |||||||||  ||||| ||||||||    
T  5240287 agatacattaattattcaatgtatctaaaaaatcaaattttgcttataatagtgaccggagggagta 5240221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 441
Target Start/End: Original strand, 18846008 - 18846058
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    |||||||||||||||||| |||   ||||||||||| ||||||||||||||    
T  18846008 ttggtaaaataaaaaccgtaaattaaaccaaaccatatggttgagtaaaaa 18846058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 441
Target Start/End: Original strand, 19402726 - 19402776
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    |||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  19402726 ttggtaaaataaaaaccgcaaacataaccaaaccgtgcggttgagtaaaaa 19402776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 27571857 - 27571764
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| || ||||||||||  ||   ||||| ||||||||| ||||||||| ||||||||||   ||| |||| ||||||||||| |||||||    
T  27571857 aatgtaaaagattaagattttattattctctaaaagttcaagtagcacataaatacatttttgaaa---aaagcaaagaagaaacttaataagagaa 27571764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 32721171 - 32721109
Alignment:
Q  82 tttcaagtagtacataaatatatttttgaaataaaaaa-caaacaagaaacttaacaagagaa 143  Q
    ||||||| || ||||||||| |||||| |||||||||| |||| || ||||||||||||||||    
T  32721171 tttcaagcagcacataaatacattttttaaataaaaaagcaaagaataaacttaacaagagaa 32721109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 5355660 - 5355701
Alignment:
Q  266 aaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||| || |||||||||||||||| |||||||||    
T  5355660 aaaaagtcaactgtttcttataataaggaccggagggagtat 5355701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 8151154 - 8151223
Alignment:
Q  344 gtgacataggtttaattagcattt-tcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaa 412  Q
    |||||| | |||||||||| |||| |||||||||||| |||| ||| |||| |||||||||||| |||||    
T  8151154 gtgacacaagtttaattagtatttctcttatgttgcgatttggttcgattgctaaaataaaaacagcaaa 8151223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 470
Target Start/End: Original strand, 23623501 - 23623574
Alignment:
Q  397 aaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||| |||||||||||   |||||||||||  |||||||||||||  ||||| |||||| ||||||| ||||||    
T  23623501 aaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaagtgatccgaatacttccaaactaaatgc 23623574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 34111520 - 34111483
Alignment:
Q  103 atttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  34111520 atttttgaaataaaaagcaaagaagaaacttaacaaga 34111483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 40109405 - 40109332
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaactt 133  Q
    ||||||||||| ||  || ||| ||||| ||| || |||||| |||||||||||||||| |||| |||||||||    
T  40109405 aagattttatcattctatgaaagttcaaatagcacgtaaatacatttttgaaataaaaagcaaagaagaaactt 40109332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 892610 - 892562
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataata 290  Q
    ||||||||||||||| ||||| ||||||||| || |||| |||||||||    
T  892610 atacattaattattcaatgaatctaaaaagtgaatttttgcttataata 892562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 1098671 - 1098639
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataata 290  Q
    ||||| |||||||||||||||||||||||||||    
T  1098671 atgaatctaaaaagtcaacttttacttataata 1098639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 3814057 - 3814121
Alignment:
Q  243 tacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||| | ||| |||||||||||| |||| |||||||  | ||||| |||||||||    
T  3814057 tacattaattattcaacgaatctaaaaagtcaattttttcttataaacaagaccggagggagtat 3814121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 25495410 - 25495470
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||||||||||||| |||| | ||||| |  | |||||||||||||||||||    
T  25495410 ttcaagtagcacataaatatattattgatagaaaaagcttagaagaaacttaacaagagaa 25495470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 25715547 - 25715628
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   ||||| ||||||||| ||||||||| |||||| |||||||||  ||  ||||| |||||||||||||    
T  25715547 aagattttatcattctctaaaagttcaagtagcacataaatacattttttaaataaaaagtaa--aagaaccttaacaagagaa 25715628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 40515270 - 40515238
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataata 290  Q
    ||||| |||||||||||||||||||||||||||    
T  40515270 atgaatctaaaaagtcaacttttacttataata 40515238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 168 - 308
Target Start/End: Original strand, 12605621 - 12605761
Alignment:
Q  168 tccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaa 267  Q
    |||||||||||||||||||||||        ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  12605621 tccttattataagaaacaattgattttttttattcattacgtaagtgatgtatttagtctatatttacaataagatacattaattattccatgaacctaa 12605720  T
Q  268 aaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    || |||||||||| |||||||||| ||||| ||||| ||||    
T  12605721 aatgtcaactttttcttataataaagaccggagggactata 12605761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 209 - 307
Target Start/End: Complemental strand, 30438839 - 30438741
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||    
T  30438839 taagtgatgtatctagtctatatttacaataaaatacattaattattctatgaatctaaaaagtcaactttttcttataataaggatcgaagggagtat 30438741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 10145267 - 10145364
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||| ||||||||||||||    
T  10145267 taagtgatgtatctagtctatatttacaataagatacattaattattttatgaacctaaaaagtcaatttttttttataataaagaccgaagggagta 10145364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 12217543 - 12217632
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaa-cttttacttataataaggaccg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||||||||||||||||    
T  12217543 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaatctaaaaagtcaatttttttcttataataaggaccg 12217632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 167 - 307
Target Start/End: Original strand, 28605580 - 28605720
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||||||||||| |         ||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| |||    
T  28605580 gtccttattataagaaacaattaacttttttggttcattgtgtaagtgatgtatttaaactatatttacaataagatacattaattattctatgaatcta 28605679  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||| |||| ||||| |||||||||||||||| | |||||||    
T  28605680 aaaggtcagctttttcttataataaggaccggatggagtat 28605720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 14940412 - 14940283
Alignment:
Q  1 aattaaaaatgtgaacaaaaagcaagtatattatgtaagaaattttaatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaat 100  Q
    ||||||||| |||||||||||| || |||||||||||||||||      ||||||||  ||||||||||||||  |||| |||||||||| ||| |||||    
T  14940412 aattaaaaacgtgaacaaaaagtaattatattatgtaagaaat------gtaaaacactaagattttatctttctataatatttcaagtaatacgtaaat 14940319  T
Q  101 atatttttgaaataaaaaacaaacaagaaacttaac 136  Q
    |||||||| |||||||| ||||| ||||||||||||    
T  14940318 atatttttcaaataaaatacaaagaagaaacttaac 14940283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 9343258 - 9343134
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||| |||||||||||        ||| |||| |||| | |||||||||||||||||||| || |||||||||||||||||||||||| |||    
T  9343258 gtccttattataggaaacaattgacttttcaaatttattgtgtaaataatgtatctagtctatatttataacaagatacattaattattctatgaatcta 9343159  T
Q  267 aaaagtcaacttttacttataataa 291  Q
    ||||||||| | || ||||||||||    
T  9343158 aaaagtcaattatttcttataataa 9343134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 306
Target Start/End: Complemental strand, 8265077 - 8264971
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||  ||||| |||| | ||  ||||||||| ||||| |    
T  8265077 ttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaactaaaaaaatcaattgttttttataataaagaccgga 8264978  T
Q  300 gggagta 306  Q
     ||||||    
T  8264977 tggagta 8264971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 316 - 440
Target Start/End: Complemental strand, 13859073 - 13858948
Alignment:
Q  316 ttaaaagtttatatgagtattggtttatgtgacataggtttaattagca-ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaa 414  Q
    |||||||||| |||||||| | | |||||||||||||||| |||||||| ||||||||| |||||||||| |||  |||||||||||||||| | |||      
T  13859073 ttaaaagtttctatgagtacttgattatgtgacataggttgaattagcatttttcttatcttgcggtttggttcggttggtaaaataaaaactgtaaacc 13858974  T
Q  415 gaaccaaaccatttggttgagtaaaa 440  Q
    ||||||||  || |||||||||||||    
T  13858973 gaaccaaataatgtggttgagtaaaa 13858948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 295
Target Start/End: Original strand, 359588 - 359683
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggac 295  Q
    ||||||| |||||||||||||||| |||||||||| ||  |||||||||| ||||||  ||||||||||||||||| | || ||||||||||||||    
T  359588 ttcattgtgtaagtgatgtatctaatctatatttataacgagatacattagttattcattgaacctaaaaagtcaattgtttcttataataaggac 359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 322 - 451
Target Start/End: Original strand, 30752982 - 30753112
Alignment:
Q  322 gtttatatgagtattggtttatgtgacataggtttaatt-agcattttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacca 420  Q
    |||| ||||||||||||||||||||| |||| |||| || |   |||||||||||||||||||| |||  ||||||||||||||||||||||  ||||||    
T  30752982 gtttctatgagtattggtttatgtgatatagatttagttaatgtttttcttatgttgcggtttggttcggttggtaaaataaaaaccgcaaactgaacca 30753081  T
Q  421 aaccatttggttgagtaaaaagttgatctga 451  Q
    ||| ||   ||||||||||||  ||||||||    
T  30753082 aactatgcagttgagtaaaaaagtgatctga 30753112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 167 - 307
Target Start/End: Complemental strand, 2913471 - 2913331
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||| |||||||||         |||||||  ||||| |||||||||||||||||||| ||  |   ||||||||||||| ||||| |||    
T  2913471 gtccttattataagcaacaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgacgaacattaattattcaatgaatcta 2913372  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||| | || |||||||||||||||| |||||||||    
T  2913371 aaaagtcaaatgttgcttataataaggaccggagggagtat 2913331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 3847461 - 3847545
Alignment:
Q  210 aagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataagga 294  Q
    |||| ||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||  |||| ||||||| |||||    
T  3847461 aagtaatgcatctagtctatatttataataaaatatattaattattatatgaacctaaaaagtcacttttttcttataacaagga 3847545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 19134873 - 19134806
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataa-aaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| ||||||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  19134873 taaaagttcaagtagcacataaatacatttttgaaataaaaaaacaaagaagaaacttaacaagagaa 19134806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 892138 - 892046
Alignment:
Q  51 taaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| || ||||||||||| ||   ||||| ||||||||| ||||||||| ||||||||||||||||  | | |||||||||||||||||||    
T  892138 taaaagattaagattttatcattctctaaaagttcaagtagcacataaatacatttttgaaataaaaagtagagaagaaacttaacaagagaa 892046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 13532074 - 13531998
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaa 123  Q
    |||| |||| || ||||||||||| ||  |||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  13532074 aatgcaaaagattaagattttatcattctataaaatttcaagtagcacataaatatgttttttaaataaaaaacaaa 13531998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 2913416 - 2913483
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||| |||| | |||||||||||||||||| | || |||||||||||||||| |||||||||    
T  2913416 agatacattacttatacaatgaacctaaaaagtcaattgttgcttataataaggaccggagggagtat 2913483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 29284549 - 29284636
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggac 295  Q
    ||||||||||||||||||||||||||| ||  |||| |||||||||||| ||||| ||||| ||| || | || ||||| ||||||||    
T  29284549 gtaagtgatgtatctagtctatatttataacgagatgcattaattattcaatgaaactaaacagttaattgtttcttattataaggac 29284636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 32190469 - 32190386
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   ||||| |||||||||  |||||||| ||||||||||||||||  ||| |||||||||||||||||||    
T  32190469 aagattttatcattctctaaaagttcaagtagcgcataaatacatttttgaaataaaaagaaaagaagaaacttaacaagagaa 32190386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 30752884 - 30752950
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||||| |||||  ||||||||| |||||||||||| |||||||| ||||||||||| |||||||    
T  30752884 taaaattttaagtatcacataaatacatttttgaaatagaaaacaaagaagaaacttaataagagaa 30752950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 33127842 - 33127904
Alignment:
Q  213 tgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaa 275  Q
    |||||||||||||||||||||  || |||||||||||||||||| || || ||||||||||||    
T  33127842 tgatgtatctagtctatatttgtaacaagatacattaattattcaataaatctaaaaagtcaa 33127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 13859181 - 13859092
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataa-aaaacaaacaagaaacttaa 135  Q
    |||||||||||   |||||||||| ||   |||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||||    
T  13859181 aatgtaaaacactgagattttatcattctgtaaaattttaagtagtagataaatatatatttgaaataaaaaaacaaagaagaaacttaa 13859092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 31632204 - 31632253
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  31632204 atgaacctaaaaagtcaacttttacttataatagtgaccggagggagtat 31632253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 29048866 - 29048926
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| ||||||||| |||||||||| ||||| |||| ||||||||||||| |||||    
T  29048866 ttcaagtagcacataaatacatttttgaaacaaaaagcaaagaagaaacttaacatgagaa 29048926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 28633240 - 28633323
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   ||||| || |||||  ||||||||| |||||||||||| ||| |||| |||||||||||||||||||    
T  28633240 aagattttatcattttctaaaagtttaagtaacacataaatacatttttgaaatagaaagcaaaaaagaaacttaacaagagaa 28633323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 2230431 - 2230501
Alignment:
Q  239 aagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    ||||||||||||||| || ||||| ||||||||||||  ||| |||||||  ||||||| |||||||||||    
T  2230431 aagatacattaattactcaatgaatctaaaaagtcaaagttttcttataaataggaccggagggagtataa 2230501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 14564738 - 14564796
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaa 135  Q
    ||||| ||||| ||| ||||||||| |||||||||||||||| |||| |||||||||||    
T  14564738 taaaagttcaaatagcacataaatacatttttgaaataaaaagcaaagaagaaacttaa 14564796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 18491758 - 18491808
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||| ||||    
T  18491758 atgaacctaaaaagtcaacttttacttataatagtgaccggagggattata 18491808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 22414122 - 22414188
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| ||||||||| |||||||| | | ||| |||| |||||||||||||||||||    
T  22414122 taaaagttcaagtagcacataaatagatttttgatagataaagcaaagaagaaacttaacaagagaa 22414188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 316 - 384
Target Start/End: Complemental strand, 14940256 - 14940187
Alignment:
Q  316 ttaaaagtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttg 384  Q
    |||||||||| ||||||| ||||||||| | ||||||||| ||||| |||||| |||| |||||||||||    
T  14940256 ttaaaagtttctatgagtcttggtttattttacataggttcaattaacatttttcttaagttgcggtttg 14940187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 470
Target Start/End: Original strand, 22414267 - 22414372
Alignment:
Q  365 ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaaca 464  Q
    ||||||||| |||||||||| |||  || ||||||| |||||| ||||  ||||||||||||   ||||||||||||||| |||  ||||| ||| |||     
T  22414267 ttttcttatattgcggtttggttcggttcgtaaaatgaaaaccacaaatcgaaccaaaccatgcagttgagtaaaaagtttatccaaatacatccgaacc 22414366  T
Q  465 aaatgc 470  Q
    ||||||    
T  22414367 aaatgc 22414372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 455
Target Start/End: Original strand, 6267463 - 6267550
Alignment:
Q  368 tcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    ||||||||||||||||| ||   ||  ||||||||||||||||||   |||||||||||  |||||||||||||  |||| |||||||    
T  6267463 tcttatgttgcggtttggtttggtttttaaaataaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaatgtgatatgaatac 6267550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 17598173 - 17598110
Alignment:
Q  243 tacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||||||||||||||| ||  ||||||||||| |||| ||||||| |||||||| ||| ||||    
T  17598173 tacattaattattctataaatttaaaaagtcaattttttcttataagaaggaccggaggaagta 17598110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 384
Target Start/End: Complemental strand, 13531937 - 13531879
Alignment:
Q  327 tatgagtattggtttatgtgacataggtttaattagca-ttttcttatgttgcggtttg 384  Q
    ||||||||||||| || |||| ||| ||||||||| || ||||||||||||||||||||    
T  13531937 tatgagtattggtctaggtgagatatgtttaattaacatttttcttatgttgcggtttg 13531879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 26484335 - 26484397
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaa 270  Q
    |||| |||||||| ||||||||||||| || ||||| |||||||||||| || || |||||||    
T  26484335 gtaaatgatgtatgtagtctatatttataacaagatgcattaattattccataaatctaaaaa 26484397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 13092319 - 13092376
Alignment:
Q  86 aagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||||||| ||||| |||||||||| |||||  ||| | |||||||||||||||||    
T  13092319 aagtagtacaaaaatacatttttgaaagaaaaagtaaagaggaaacttaacaagagaa 13092376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 245
Target Start/End: Complemental strand, 17599542 - 17599513
Alignment:
Q  216 tgtatctagtctatatttacaataagatac 245  Q
    ||||||||||||||||||||||||||||||    
T  17599542 tgtatctagtctatatttacaataagatac 17599513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 32124221 - 32124270
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||| |||||||||||| |||| |||||||||| |||||||| ||||||    
T  32124221 atgaatctaaaaagtcaatttttgcttataataatgaccgaagagagtat 32124270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 8064820 - 8064868
Alignment:
Q  95 ataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||| |||||||||||||||| |||| || ||||||||||| ||||    
T  8064820 ataaatacatttttgaaataaaaatcaaagaaaaaacttaacaaaagaa 8064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 12108366 - 12108282
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatattttt-gaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   ||||| ||||||| | | ||||||| |||||| || ||||||| |||| |||||||||||||||||||    
T  12108366 aagattttatcattctctaaaagttcaagtggcatataaatacattttttgacataaaaatcaaagaagaaacttaacaagagaa 12108282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 14589604 - 14589536
Alignment:
Q  240 agatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    |||||||| |||||||| ||| | || |||||| || ||||  ||||||||| ||||||||||||||||    
T  14589604 agatacatgaattattcaatgtatctgaaaagtgaagttttgtttataataatgaccgaagggagtata 14589536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 441
Target Start/End: Complemental strand, 15837315 - 15837239
Alignment:
Q  365 ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    |||||||||||||||||||| |||  ||| ||||||||||||| ||||   |||| |||||| ||||| || |||||    
T  15837315 ttttcttatgttgcggtttggttcggttgctaaaataaaaaccacaaaccaaaccgaaccatgtggttaaggaaaaa 15837239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 23916228 - 23916276
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    ||||| |||||||||||| | || |||||||||||||||| ||||||||    
T  23916228 atgaatctaaaaagtcaattgtttcttataataaggaccggagggagta 23916276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 24644716 - 24644660
Alignment:
Q  85 caagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagag 141  Q
    ||||||||||||||||| |||||||||| | ||| |||| |||||||| ||| ||||    
T  24644716 caagtagtacataaatacatttttgaaagataaagcaaagaagaaactcaacgagag 24644660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 3e-34; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 45977149 - 45977243
Alignment:
Q  212 gtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||  |||||||||||||    
T  45977149 gtgatgtatctagtctatatttacaataagatacattaattattctataaacgtaaaaagtcaactttttcttataataaaaaccgaagggagta 45977243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 52279277 - 52279383
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    ||||||| |||||||||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||||||||| || |    
T  52279277 ttcattgtgtaagtgatgtatcaagtctatatttacaataagatatattaattattatatgaatctaaaaagtcaactttttcttataataaggatcgga 52279376  T
Q  300 gggagta 306  Q
    |||||||    
T  52279377 gggagta 52279383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 51590536 - 51590427
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    |||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| | ||  |||||||||||||||     
T  51590536 attcattgtgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaaccaaaaaagtcaattgttttttataataaggaccgg 51590437  T
Q  299 agggagtata 308  Q
    ||||||||||    
T  51590436 agggagtata 51590427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 19998557 - 19998409
Alignment:
Q  159 ttcatccagtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattcta 258  Q
    ||||||| ||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||||| |||||| |||||||| || |    
T  19998557 ttcatccggtccttattataagaaacaattgaatttttagattcattgtgtaagtgatgtatctagtctatatttacaacaagatatattaattactcaa 19998458  T
Q  259 tgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||  |||||||||||   || |||||||||||||||| |||||||||    
T  19998457 tgaatataaaaagtcaaaagtttcttataataaggaccggagggagtat 19998409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 200 - 275
Target Start/End: Complemental strand, 29438243 - 29438168
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaa 275  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29438243 ttcattgtgtaagtgatgtatctagtctatattttcaataagatacattaattattctatgaacctaaaaagtcaa 29438168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 208 - 303
Target Start/End: Original strand, 27687892 - 27687987
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaaggga 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| || |||| ||||||| ||||| || |||||    
T  27687892 gtaagtgatgtatctagtctatatttacaataagatacattaattattctataaacttaaaaagttaattttttcttataacaaggatcgcaggga 27687987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 44224364 - 44224268
Alignment:
Q  210 aagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||  |||||||||| ||| | ||||||||    
T  44224364 aagtgatgtatctagactatatttacaataagatacattaattattctatgaatctaaaaagtcaa-ttttttttataataagaaccaatgggagtat 44224268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 52829052 - 52829188
Alignment:
Q  1 aattaaaaatgtgaacaaaaagcaagtatattatgtaagaaattttaatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaat 100  Q
    |||||||||| || || ||||| || |||||||||||||||||      |||||| |  ||||||||||| ||  ||||||||| ||| |||||||||||    
T  52829052 aattaaaaatatggacgaaaagtaattatattatgtaagaaat------gtaaaatactaagattttatcattctataaaattttaaggagtacataaat 52829145  T
Q  101 atatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  52829146 atatttttgagataaaaaacaaagaagaaacttaacaagagaa 52829188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 470
Target Start/End: Original strand, 52829205 - 52829359
Alignment:
Q  316 ttaaaagtttatatgagtattggtttatgtgacataggtttaattagca-ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaa 414  Q
    |||||||||| |||||||||||||||||||||||||| | || ||  || |||||||||||||||||||| |||  || ||||||||||||| |||||      
T  52829205 ttaaaagtttctatgagtattggtttatgtgacatagttatagttgacatttttcttatgttgcggtttggttcggttagtaaaataaaaactgcaaatc 52829304  T
Q  415 gaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    ||||||||| |   |||||||||||||  |||||||||||| ||||||| ||||||    
T  52829305 gaaccaaactacgcggttgagtaaaaa-atgatctgaatacatccaaactaaatgc 52829359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 203 - 273
Target Start/End: Complemental strand, 13770811 - 13770741
Alignment:
Q  203 attgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtc 273  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  13770811 attgtgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaatctaaatagtc 13770741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 209 - 307
Target Start/End: Complemental strand, 15699560 - 15699462
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| || ||||| ||||||| ||||   || |||||||||||||||| |||||||||    
T  15699560 taagtgatgtatctagtctatatttacaacaagatacattaattactcaatgaatctaaaaaatcaaaagtttcttataataaggaccggagggagtat 15699462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 13320349 - 13320450
Alignment:
Q  203 attgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaaggg 302  Q
    |||| |||| |||||||| ||  ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| ||| | ||||    
T  13320349 attgtgtaaatgatgtatttaaactatatttacaataagatatattaattattctatgaatctaaaaagtcaactttttcttataataaagactggaggg 13320448  T
Q  303 ag 304  Q
    ||    
T  13320449 ag 13320450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 36203248 - 36203152
Alignment:
Q  47 aatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||| | |||||||||||| ||  |||||| ||||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  36203248 aatgtaaaataccaagattttatcattctataaaagttcaagtagcacataaatacatttttgaaataaaaagcaaagaagaaacttaacaagagaa 36203152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 280
Target Start/End: Complemental strand, 32837723 - 32837661
Alignment:
Q  218 tatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaactttt 280  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  32837723 tatctagtctatattaacaataaaatacattaattattctatgaacctaaaaagtcaactttt 32837661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 167 - 308
Target Start/End: Complemental strand, 13321852 - 13321711
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||| ||||        |||||||  ||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||| |    
T  13321852 gtccttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacattaattattttataaaccaa 13321753  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    |||||| || | || ||| ||||||||| || ||||| ||||    
T  13321752 aaaagttaattgtttcttgtaataaggatcggagggactata 13321711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 161 - 306
Target Start/End: Complemental strand, 31050394 - 31050249
Alignment:
Q  161 catccagtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatg 260  Q
    |||| |||||||||||||||||||||||||         || |||| ||||||||||||| |||||||||||||||| || ||||||||||||  | |||    
T  31050394 catcaagtccttattataagaaacaattgactttttaggtttattgtgtaagtgatgtatttagtctatatttacaacaaaatacattaattacacaatg 31050295  T
Q  261 aacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    || ||||||||||||   || |||||||||||||||  ||||||||    
T  31050294 aatctaaaaagtcaaaagtttcttataataaggaccagagggagta 31050249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 167 - 305
Target Start/End: Original strand, 22182775 - 22182913
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    |||||||||||||| |||||||||        ||| |||| ||||||||||||||||| | ||||||| ||  |||| |||||||||| | |||||| ||    
T  22182775 gtccttattataagtaacaattgactttttagatttattgtgtaagtgatgtatctagcccatatttataacgagatgcattaattatccaatgaactta 22182874  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagt 305  Q
    ||||||||| | || |||||||||||||||| |||||||    
T  22182875 aaaagtcaattgttgcttataataaggaccggagggagt 22182913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 310
Target Start/End: Original strand, 25238649 - 25238726
Alignment:
Q  233 tacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtataac 310  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||| | ||||||||||||    
T  25238649 tacaacaagatacattaattattctatgaacctaaaaagtcaattgttttttataataaggacaggagggagtataac 25238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 48565632 - 48565541
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataa 291  Q
    ||||||| ||| ||||||||| ||||||||||||| || ||||||| |||||||||||||||||| ||||| |||| | || ||||||||||    
T  48565632 ttcattgtgtaggtgatgtatttagtctatatttataacaagatactttaattattctatgaaccaaaaaaatcaattatttcttataataa 48565541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 441
Target Start/End: Original strand, 24630362 - 24630484
Alignment:
Q  320 aagtttatatgagtattggtttatgtgacataggtttaattagcatt-ttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaac 418  Q
    |||||| | |||||| ||||||| |||||||||||| ||||| || | ||||||||||||  |||| |||| ||| | ||||||||||||||||  ||||    
T  24630362 aagtttctttgagtactggtttaggtgacataggttcaattaacactcttcttatgttgcaatttggttcagttgatgaaataaaaaccgcaaactgaac 24630461  T
Q  419 caaaccatttggttgagtaaaaa 441  Q
    ||||||||  |||||||||||||    
T  24630462 caaaccatgcggttgagtaaaaa 24630484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 6693864 - 6693804
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||||||| | |||||||| |||||||||| |||||||||||||||||||    
T  6693864 ttcaagtagtacataaatacaattttgaaagaaaaaacaaagaagaaacttaacaagagaa 6693804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 17651989 - 17652118
Alignment:
Q  1 aattaaaaatgtgaacaaaaagcaagtatattatgtaagaaattttaatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaat 100  Q
    ||||||||||||| |||||||| || |||| ||||||||||||      |||||| |  ||||||||||  ||   ||||| ||||||||| ||| ||||    
T  17651989 aattaaaaatgtggacaaaaagtaattatactatgtaagaaat------gtaaaagactaagattttattattctctaaaagttcaagtagcacaaaaat 17652082  T
Q  101 atatttttgaaataaaaaacaaacaagaaacttaac 136  Q
    | ||||||||||||||||||||| ||||||||||||    
T  17652083 acatttttgaaataaaaaacaaagaagaaacttaac 17652118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 365 - 469
Target Start/End: Complemental strand, 23474737 - 23474634
Alignment:
Q  365 ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaaca 464  Q
    |||||||||||||||||||| ||   ||||||||||||||||||||||  ||||||||||||  ||||| |||||||  |||||||||||| ||| |||     
T  23474737 ttttcttatgttgcggtttggtttggttggtaaaataaaaaccgcaaatcgaaccaaaccatgaggttgggtaaaaa-atgatctgaatacatccgaact 23474639  T
Q  465 aaatg 469  Q
    |||||    
T  23474638 aaatg 23474634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 26344673 - 26344569
Alignment:
Q  366 tttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaa 465  Q
    |||||||| |||||||||| |||  |||||||||| ||||| |||||  ||||||||||||  ||||||||||||| |||||| |||||| ||| ||| |    
T  26344673 tttcttatattgcggtttggttcggttggtaaaatcaaaactgcaaaccgaaccaaaccatgcggttgagtaaaaaattgatccgaatacatccgaacca 26344574  T
Q  466 aatgc 470  Q
    |||||    
T  26344573 aatgc 26344569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 9249876 - 9249793
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| || | ||||| | ||||||  ||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  9249876 aagattttatcgttaactaaaagtacaagtaacacataaatacatttttgaaataaaaaataaagaagaaacttaacaagagaa 9249793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 12175507 - 12175566
Alignment:
Q  213 tgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagt 272  Q
    |||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||||    
T  12175507 tgatgtatctagtctatatttataacaagatacattaattgttcaatgaacctaaaaagt 12175566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 17989332 - 17989421
Alignment:
Q  51 taaaacatcaagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    ||||| || ||||| ||||| ||  |||||| ||||||||| ||||||||||||||||||||||||||  ||| |||||||||| |||||    
T  17989332 taaaagattaagatgttatcattctataaaagttcaagtagcacataaatatatttttgaaataaaaagaaaagaagaaacttagcaaga 17989421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 25507191 - 25507252
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaa 138  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||||| || |||||||||||    
T  25507191 taaaagttcaagtagcacataaatatattttagaaataaaaaacaaagaaaaaacttaacaa 25507252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 25559782 - 25559727
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaa 138  Q
    ||||||||||| ||||||| |||||||||||||||| |||| ||||||||||||||    
T  25559782 ttcaagtagtagataaatacatttttgaaataaaaagcaaagaagaaacttaacaa 25559727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 35980043 - 35979977
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| |||||||||   |||||||||||||| |||| |||||||||||||||||||    
T  35980043 taaaagttcaagtagcacataaataccattttgaaataaaaagcaaagaagaaacttaacaagagaa 35979977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 390 - 468
Target Start/End: Complemental strand, 36781803 - 36781726
Alignment:
Q  390 attggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaat 468  Q
    |||||| |||| |||||||||||  ||||||||||||  ||||||||||||| ||||||||||||| ||||||| ||||    
T  36781803 attggttaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtaaaaa-ttgatctgaatacatccaaaccaaat 36781726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 34174897 - 34174982
Alignment:
Q  168 tccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaatta 253  Q
    |||||||||||||||||||||||         ||||||| ||||||||||||| |||| ||||||| ||| |||||||||||||||    
T  34174897 tccttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatttagtttatatttgcaacaagatacattaatta 34174982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 50951808 - 50951751
Alignment:
Q  76 ataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaactt 133  Q
    |||||||||||||||| |||||| || |||||||||||||||| |||| |||||||||    
T  50951808 ataaaatttcaagtagcacataattacatttttgaaataaaaagcaaagaagaaactt 50951751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 455
Target Start/End: Original strand, 12974062 - 12974126
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    |||||||||| ||||| |||||  |||||||||||| | |||||||||||| |||||||||||||    
T  12974062 ttggtaaaatcaaaacagcaaaccgaaccaaaccatgttgttgagtaaaaaattgatctgaatac 12974126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 441
Target Start/End: Complemental strand, 15881821 - 15881745
Alignment:
Q  365 ttttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 441  Q
    ||||||||||||||||||||||| | |||| || ||||||||| |||   |||||||||||| | ||||||||||||    
T  15881821 ttttcttatgttgcggtttgattaagttggaaatataaaaaccacaattcgaaccaaaccatgtagttgagtaaaaa 15881745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 18038794 - 18038698
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggac 295  Q
    ||||||||  ||||||||||||||| |||| ||||| ||  |||||||| | |||  | |||||||||||||||||| | || ||||||||||||||    
T  18038794 attcattgtttaagtgatgtatctaatctacatttataacgagatacatcacttaagcaatgaacctaaaaagtcaaatatttcttataataaggac 18038698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 26344811 - 26344751
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||| ||||||||| |||| |||||||||| ||||| |||| |||||||||||||||||||    
T  26344811 ttcaggtagtacatgaatacatttttgaaagaaaaagcaaagaagaaacttaacaagagaa 26344751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 52380497 - 52380437
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||| ||||||||| |||||||| | |||||||||| |||||||||||||||||||    
T  52380497 ttcaaatagcacataaatacatttttgatagaaaaaacaaagaagaaacttaacaagagaa 52380437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 10847366 - 10847230
Alignment:
Q  1 aattaaaaatgtgaacaaaaagcaagtatattatgtaagaaattttaatgtaaaacatcaagattttatctttgaataaaatttcaagtagtacataaat 100  Q
    ||||||||||||| |||||||| || | ||||| |||||||||      |||||| |  ||||||||||| ||    |||| ||||| ||| || |||||    
T  10847366 aattaaaaatgtggacaaaaagtaattctattacgtaagaaat------gtaaaagactaagattttatcatttttgaaaagttcaaatagcacgtaaat 10847273  T
Q  101 atatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    | |||||||||||||||| |||| |||||||||||||| ||||    
T  10847272 acatttttgaaataaaaagcaaagaagaaacttaacaaaagaa 10847230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 12973887 - 12973942
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaa 138  Q
    ||||||||||||||||||  |||||||| | |||||||||| ||||||||||||||    
T  12973887 ttcaagtagtacataaatgcatttttgacagaaaaaacaaagaagaaacttaacaa 12973942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 470
Target Start/End: Complemental strand, 27507114 - 27507023
Alignment:
Q  379 ggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||||| |||| |||||||||| |||||||||||  |||||||| |||  |||||||||||||  ||||| |||||| ||| ||| ||||||    
T  27507114 ggtttggttcagttggtaaaatcaaaaccgcaaaccgaaccaaagcatgcggttgagtaaaaaaatgatccgaatacatccgaaccaaatgc 27507023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 48565628 - 48565679
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    |||||| |||||||| ||||||| |||||||||||||||| |||||||||||    
T  48565628 atgaacttaaaaagttaactttttcttataataaggaccggagggagtataa 48565679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 9676025 - 9675959
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtata 308  Q
    |||||||| |||||  ||||||||||||||| || ||||||||||||||  ||||| ||||||||||    
T  9676025 atacattatttattaaatgaacctaaaaagttaatttttacttataatagtgaccggagggagtata 9675959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 426
Target Start/End: Complemental strand, 35979946 - 35979840
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacc 419  Q
    ||||| |||||||||| || || ||||||||| |||||||||  |||| |||||||||||||||| ||   |||||||||  |||||||||||   ||||    
T  35979946 agtttctatgagtatttgtctaggtgacatagatttaattagtgtttttcttatgttgcggtttggtttggttggtaaaaagaaaaccgcaaaccaaacc 35979847  T
Q  420 aaaccat 426  Q
    |||||||    
T  35979846 aaaccat 35979840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 35992366 - 35992300
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| |||||||||   ||||||||||||||  ||| |||||||||||||||||||    
T  35992366 taaaagttcaagtagcacataaataccattttgaaataaaaagtaaagaagaaacttaacaagagaa 35992300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 41751533 - 41751599
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| |  |||||| ||||||||||| ||||||||| |||||| ||||||||||||    
T  41751533 taaaaattcaagtagcatgtaaatacatttttgaaattaaaaacaaagaagaaaattaacaagagaa 41751599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 44056047 - 44056113
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||| ||||||||| |||||||||||| ||| |||| ||  |||||||||||||||    
T  44056047 taaaagttcaagtagcacataaatacatttttgaaatataaagcaaagaatgaacttaacaagagaa 44056113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 6248374 - 6248451
Alignment:
Q  64 ttttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagag 141  Q
    ||||||||||   ||||| ||||| ||| ||||||||| |||||||| | ||||| |||| |||||||||||||||||    
T  6248374 ttttatctttctctaaaagttcaattagcacataaatacatttttgatagaaaaagcaaagaagaaacttaacaagag 6248451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 40094927 - 40094869
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||||||||||||  || |||||||||| ||||| |||| |||||||||||||||||||    
T  40094927 ttcaagtagtacata--tacatttttgaaagaaaaagcaaagaagaaacttaacaagagaa 40094869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 321 - 438
Target Start/End: Original strand, 44056145 - 44056273
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgc----------ggtttgattcaattggtaaaataaaaaccgc 409  Q
    ||||||||||||||||||| || |||||||| ||||||| |  ||||| ||||||||||          |||||| |||| |||||||||| ||||||||    
T  44056145 agtttatatgagtattggtctaagtgacatatgtttaatcaatatttttcttatgttgcagtttggtttggtttggttcagttggtaaaatgaaaaccgc 44056244  T
Q  410 aaaaagaaccaaaccatttggttgagtaa 438  Q
    ||| | |||||||||||  ||||||||||    
T  44056245 aaacataaccaaaccatgcggttgagtaa 44056273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 321 - 441
Target Start/End: Complemental strand, 50951677 - 50951556
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatt-ttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaacc 419  Q
    ||||| ||||||||||||| |  ||||  |||||| ||||||| || || |||||||| |||||||||   || |||||||||||||||| ||  |||||    
T  50951677 agtttctatgagtattggtcttggtgagttaggttcaattagcgttgttattatgttgtggtttgatttggttagtaaaataaaaaccgccaaccgaacc 50951578  T
Q  420 aaaccatttggttgagtaaaaa 441  Q
    |||||||  |||||| ||||||    
T  50951577 aaaccatgcggttgaataaaaa 50951556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 51590531 - 51590580
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||| |||||| |||||||||| |||||||||||||||| |||||||||    
T  51590531 atgaatctaaaaggtcaactttttcttataataaggaccggagggagtat 51590580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 52030878 - 52030963
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaatt 252  Q
    ||||||||||||||||| ||||||         ||||| | |||||||||||||||| | |||||||| |||||||||||||||||    
T  52030878 gtccttattataagaaaaaattgattttttagtttcatcgtgtaagtgatgtatctaatttatatttataataagatacattaatt 52030963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 52112972 - 52113017
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaaggga 303  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||    
T  52112972 atgaacctaaaaagtcaacttttacttataatagtgactgaaggga 52113017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 8165215 - 8165151
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagca-ttttcttatgttgcggtttg 384  Q
    ||||||||||||||||| | || |||||||| ||||||||| || |||| |||||||||||||||    
T  8165215 agtttatatgagtattgatctaggtgacatatgtttaattaacatttttattatgttgcggtttg 8165151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 11537255 - 11537315
Alignment:
Q  320 aagtttatatgagtattggtttatgtgacataggtttaattagcattttcttatgttgcgg 380  Q
    |||||| ||||||||||| | || |||||||| ||||||||||  ||||||||||||||||    
T  11537255 aagtttttatgagtattgttctaagtgacatatgtttaattagtgttttcttatgttgcgg 11537315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 412
Target Start/End: Original strand, 25507288 - 25507380
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttgattcaattggtaaaataaaaaccgcaaa 412  Q
    ||||| ||||| |||||| ||||| ||||||  |||||||||  |||| ||||||||| |||||| ||   ||||||||||||||||||||||    
T  25507288 agtttctatgaatattggattatgagacatatatttaattagtttttttcttatgttgtggtttggtttggttggtaaaataaaaaccgcaaa 25507380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 455
Target Start/End: Original strand, 35375656 - 35375720
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatac 455  Q
    ||||||||||||||||||||||   ||| |||||||  |||||||||||||  ||||||||||||    
T  35375656 ttggtaaaataaaaaccgcaaaccaaacaaaaccatgcggttgagtaaaaaaatgatctgaatac 35375720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 8165306 - 8165247
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagaga 142  Q
    ||||||||| |||||||||  ||||||||||||||| |||| ||| |||||||| |||||    
T  8165306 ttcaagtagcacataaatacgtttttgaaataaaaagcaaagaaggaacttaacgagaga 8165247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 15881947 - 15881900
Alignment:
Q  93 acataaatatatttttgaaataaaaaacaaacaagaaacttaacaaga 140  Q
    ||||||||| |||||| ||||||||| |||| ||||||||||||||||    
T  15881947 acataaatacatttttaaaataaaaagcaaagaagaaacttaacaaga 15881900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 306
Target Start/End: Complemental strand, 26070930 - 26070823
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccga 298  Q
    ||||||||| ||| | |||||| | |||||||||    ||||||||||| ||||| || ||||| |||||||||||| ||| ||||||||  | |||||     
T  26070930 attcattgcataaataatgtatttggtctatattctagataagatacatcaattactcaatgaatctaaaaagtcaaatttcacttataaataagaccgg 26070831  T
Q  299 agggagta 306  Q
    ||||||||    
T  26070830 agggagta 26070823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 36782135 - 36782076
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagaga 142  Q
    |||||||| |||||||||| |||||| ||| |||||  ||| ||||||||||||||||||    
T  36782135 ttcaagtaatacataaatacattttttaaagaaaaaggaaaaaagaaacttaacaagaga 36782076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 441
Target Start/End: Original strand, 3937178 - 3937292
Alignment:
Q  327 tatgagtattggtttatgtgacataggtttaattagcattttcttatgttgcggtttgattcaattggtaaaataaaaaccgcaaaaagaaccaaaccat 426  Q
    ||||||||||||| ||  ||| |||  |||||||||  |||| |||| |||| ||||| ||   ||| |||||| |||||||||||  ||||||||||||    
T  3937178 tatgagtattggtataaatgatatacatttaattagtgtttttttatattgcagtttggtttggttgctaaaatcaaaaccgcaaaccgaaccaaaccat 3937277  T
Q  427 ttggttgagtaaaaa 441  Q
     |||||| |||||||    
T  3937278 gtggttgggtaaaaa 3937292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 469
Target Start/End: Original strand, 8269167 - 8269237
Alignment:
Q  399 ataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatg 469  Q
    |||||||||| |||  |||||||| ||| ||||||||||||||  |||||| ||||| ||||||| |||||    
T  8269167 ataaaaaccgtaaattgaaccaaatcatgtggttgagtaaaaaagtgatctaaatacatccaaaccaaatg 8269237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 22182806 - 22182764
Alignment:
Q  264 ctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||||| | ||||||||||||||||||| ||||||||    
T  22182806 ctaaaaagtcaattgttacttataataaggaccggagggagta 22182764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 306
Target Start/End: Original strand, 29256685 - 29256747
Alignment:
Q  244 acattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||| || ||||| ||||||||||||||||| |||||||  ||||||| ||| ||||    
T  29256685 acattaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggaagta 29256747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 32910139 - 32910093
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaa 123  Q
    ||||||||||||||| |||||||||| ||||| ||||||||| ||||    
T  32910139 taaaatttcaagtagcacataaatatgttttttaaataaaaatcaaa 32910093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 640611 - 640539
Alignment:
Q  215 atgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataa 288  Q
    |||||| ||||||||||||   ||||||||||| ||||| || ||||| |||||||||||| |||| |||||||    
T  640611 atgtatttagtctatattttagataagatacatcaattactc-atgaatctaaaaagtcaattttttcttataa 640539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 468
Target Start/End: Complemental strand, 6693694 - 6693621
Alignment:
Q  395 taaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaat 468  Q
    |||||| |||||| ||||   |||||||||||  | ||||||||||| ||||||||||||| ||| ||||||||    
T  6693694 taaaattaaaaccacaaacctaaccaaaccatgcgattgagtaaaaaattgatctgaatacatccgaacaaaat 6693621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 34768331 - 34768407
Alignment:
Q  213 tgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataata 290  Q
    |||||||| |||||||||| || | | | |||||||| || ||  ||||||||||||||||||||||| |||||||||    
T  34768331 tgatgtatatagtctatatataga-tcacatacattatttgttgaatgaacctaaaaagtcaacttttgcttataata 34768407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 39166952 - 39166903
Alignment:
Q  94 cataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    |||||||  |||||| ||||||||| |||| |||||||||||||||||||    
T  39166952 cataaatgcatttttaaaataaaaaccaaagaagaaacttaacaagagaa 39166903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 50155383 - 50155448
Alignment:
Q  242 atacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||| ||||| || ||||| ||||||||||||||||| |||||||  ||||||| ||| |||||    
T  50155383 atacatcaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggaagtat 50155448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 7375551 - 7375619
Alignment:
Q  239 aagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||  | ||||| |||||||||||| |||| |||||||  |||||  ||||||||||    
T  7375551 aagatacattaattacacaatgaatctaaaaagtcaattttttcttataaataggactaaagggagtat 7375619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 11073042 - 11072978
Alignment:
Q  321 agtttatatgagtattggtttatgtgacataggtttaattagcatttt-cttatgttgcggtttg 384  Q
    ||||| ||| |||||||||||| |||| ||| ||||| ||| |||||| ||||||||||||||||    
T  11073042 agtttctataagtattggtttaggtgagatatgtttatttaacatttttcttatgttgcggtttg 11072978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 20486751 - 20486667
Alignment:
Q  211 agtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggac 295  Q
    |||||| ||||||| |||||||||||| ||| ||| |||||||| | ||||| |||||||  |||   || ||||||||||||||    
T  20486751 agtgatatatctagcctatatttacaagaagttacgttaattatacaatgaatctaaaaaaacaataatttcttataataaggac 20486667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 26924275 - 26924211
Alignment:
Q  243 tacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||| | || |||||  |||||||||||||||| |||||||  ||||||| |||||||||    
T  26924275 tacattaatgactcaatgaatttaaaaagtcaactttttcttataaataggaccggagggagtat 26924211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 27455641 - 27455581
Alignment:
Q  327 tatgagtattggtttatgtgacataggtttaattagcattttcttatgttgcggtttgatt 387  Q
    ||||||||||||  ||| |||||||  |||||||||  |||||||||||||| ||||||||    
T  27455641 tatgagtattggactatatgacataaatttaattagtgttttcttatgttgcagtttgatt 27455581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 29064191 - 29064247
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattatt 255  Q
    ||||||||  ||| |||||||| || |||||||||||||||| ||| ||||||||||    
T  29064191 attcattgtataaatgatgtatttaatctatatttacaataaaatatattaattatt 29064247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 25666 - 25765
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacct-aaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| ||| |||||    
T  25666 taagtgatgtatctagtctatatttataataagatacattaattattctatgaacgtaaaaaagtcaactttttcttataataaggaccggaggaagtat 25765  T

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Target: scaffold0110 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 40234 - 40341
Alignment:
Q  200 ttcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaa 299  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| |||||||| || ||||| ||||||||||||   || |||||||||||||||| |    
T  40234 ttcattgtgtaagtgatgtatctagtctatatttacaacaagatatattaattactcaatgaatctaaaaagtcaaaagtttcttataataaggaccgga 40333  T
Q  300 gggagtat 307  Q
    ||||||||    
T  40334 gggagtat 40341  T

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Target: scaffold0767 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 170 - 309
Target Start/End: Complemental strand, 3944 - 3805
Alignment:
Q  170 cttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaa 269  Q
    |||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||| ||  |||| |||||| ||||| ||||| | ||||    
T  3944 cttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatctagtctatatttataacgagatgcattaagtattcaatgaatcaaaaa 3845  T
Q  270 agtcaacttttacttataataaggaccgaagggagtataa 309  Q
    |||||| | || |||||||||||||||| |||||||||||    
T  3844 agtcaattgtttcttataataaggaccggagggagtataa 3805  T

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Target: scaffold0059 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 26637 - 26736
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| || ||||| ||||||| ||||   || |||||||||||||||| |||||||||    
T  26637 gtaagtgatgtatctagtctatatttacaacaagatacattaattactcaatgaatctaaaaaatcaaaagtttcttataataaggaccggagggagtat 26736  T

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Target: scaffold0059; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 26633 - 26584
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||||||||||||   || |||||||||||||||| |||||||||    
T  26633 atgaacctaaaaagtcaatcctttcttataataaggaccggagggagtat 26584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 19391 - 19308
Alignment:
Q  208 gtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataagga 294  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||   ||||||| ||||||||||||||||| |||||||||||||    
T  19391 gtaagtgatgtaagtagtctatatttacaataagatatattaatt---ctatgaatctaaaaagtcaactttttcttataataagga 19308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 167 - 307
Target Start/End: Original strand, 112833 - 112973
Alignment:
Q  167 gtccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaaccta 266  Q
    ||||||||||||||||||||||||         |||||||   || ||||||||||| |||||||||| || |||||||||||||||||| || || |||    
T  112833 gtccttattataagaaacaattgacgttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaattattcaataaatcta 112932  T
Q  267 aaaagtcaacttttacttataataaggaccgaagggagtat 307  Q
    ||||||||| | || |||||  ||||||||| |||||||||    
T  112933 aaaagtcaattgtttcttatgttaaggaccggagggagtat 112973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 3251 - 3380
Alignment:
Q  168 tccttattataagaaacaattgannnnnnnnattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaa 267  Q
    |||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||| |   | ||||||| ||||||| || ||| |||    
T  3251 tccttattataagaaacaattgactttttatgttcattgtgtaagtgatgtatctagtctatatttatatcgaaatacattgattattcaattaacttaa 3350  T
Q  268 aaagtcaacttttacttataataaggaccg 297  Q
    ||||| || | || ||||||||||||||||    
T  3351 aaagttaattgtttcttataataaggaccg 3380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 17481 - 17384
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggaccgaagggagta 306  Q
    |||||||||| |||||||||||||||| | ||||||||||||||| || ||||| ||||||| ||||   || |||||||||| ||||| ||||||||    
T  17481 taagtgatgtgtctagtctatatttactacaagatacattaattactcaatgaatctaaaaaatcaaaagtttcttataataaagaccggagggagta 17384  T

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Target: scaffold0027 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 5456 - 5549
Alignment:
Q  199 attcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataag 292  Q
    |||||||| |||||||| ||||| ||||||||||||  | |  ||||||||||||||| ||||| |||||||||||| | || |||||||||||    
T  5456 attcattgtgtaagtgaagtatcgagtctatatttattacagtatacattaattattcaatgaatctaaaaagtcaattatttcttataataag 5549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 296
Target Start/End: Complemental strand, 12842 - 12755
Alignment:
Q  209 taagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggacc 296  Q
    |||||||||||||||||||| ||||| ||  |||||||| | |||  | |||||||||||||||||| | || |||||||||||||||    
T  12842 taagtgatgtatctagtctacatttataacgagatacatcacttaaacaatgaacctaaaaagtcaaatatttcttataataaggacc 12755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 21166 - 21115
Alignment:
Q  258 atgaacctaaaaagtcaacttttacttataataaggaccgaagggagtataa 309  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  21166 atgaacttaaaaagtcaacttttacttataataatgactgaagggagtataa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 3)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 26179 - 26245
Alignment:
Q  77 taaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||| ||||||||  ||||||||| |||||||||||||||| |||| |||||||||||||| ||||    
T  26179 taaaagttcaagtaacacataaatacatttttgaaataaaaagcaaagaagaaacttaacaatagaa 26245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 15012 - 15090
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||||||||| ||||||||| |   |||||||| ||  |||||||||||||| |||||||||||| ||||||| ||||||    
T  15012 ttggtaaaatgaaaaccgcagaccaaaccaaactatgcggttgagtaaaaag-tgatctgaatacatccaaaccaaatgc 15090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 26353 - 26432
Alignment:
Q  391 ttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaagttgatctgaatacctccaaacaaaatgc 470  Q
    |||||||||| |||||||||||   |||||||||||  ||||||| |||||  ||||| |||||| ||||||| ||||||    
T  26353 ttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagcaaaaaagtgatccgaatacatccaaactaaatgc 26432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 6392 - 6460
Alignment:
Q  320 aagtttatatgagtattggtttatgtgacataggtttaattag-cattttcttatgttgcggtttgatt 387  Q
    |||||| |||||||||||||||| |||||||| ||||||||||   |||||||||||| ||||||||||    
T  6392 aagtttctatgagtattggtttaggtgacatatgtttaattagtgtttttcttatgttacggtttgatt 6460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 6278 - 6361
Alignment:
Q  60 aagattttatctttgaataaaatttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||| ||   ||||| ||||||||  ||||||| ||||||| ||||||||||  ||| |||||||||||||||||||    
T  6278 aagattttatcattctctaaaagttcaagtaacacataaaaatattttagaaataaaaagtaaagaagaaacttaacaagagaa 6361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 427975 - 428025
Alignment:
Q  93 acataaatatatttttgaaataaaaaacaaacaagaaacttaacaagagaa 143  Q
    ||||||||||||||||||||||||||   || |||||||||||||||||||    
T  427975 acataaatatatttttgaaataaaaaggcaagaagaaacttaacaagagaa 428025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 361
Target Start/End: Original strand, 428064 - 428097
Alignment:
Q  328 atgagtattggtttatgtgacataggtttaatta 361  Q
    |||||||||||||||||||||||| |||||||||    
T  428064 atgagtattggtttatgtgacatatgtttaatta 428097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 12307 - 12223
Alignment:
Q  211 agtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggac 295  Q
    |||||||||||||| |||||||||||| ||||||| |||||||| | || || |||||||  |||   || ||||||||||||||    
T  12307 agtgatgtatctagcctatatttacaagaagatacgttaattatacaataaatctaaaaaaacaataatttcttataataaggac 12223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 7740 - 7656
Alignment:
Q  211 agtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaacttttacttataataaggac 295  Q
    |||||| ||||||| |||||||||||| ||| ||| |||||||| | ||||| |||||||  |||   || ||||||||||||||    
T  7740 agtgatatatctagcctatatttacaagaagttacgttaattatacaatgaatctaaaaaaacaataatttcttataataaggac 7656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 20395 - 20342
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaac 136  Q
    ||||| ||| |||||||||| ||||| |||| ||||||||| ||||||||||||    
T  20395 ttcaattagcacataaatattttttttaaatgaaaaacaaaaaagaaacttaac 20342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 28287 - 28234
Alignment:
Q  83 ttcaagtagtacataaatatatttttgaaataaaaaacaaacaagaaacttaac 136  Q
    ||||| ||| |||||||||| ||||| |||| ||||||||| ||||||||||||    
T  28287 ttcaattagcacataaatattttttttaaatgaaaaacaaaaaagaaacttaac 28234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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