View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18682_high_13 (Length: 317)

Name: NF18682_high_13
Description: NF18682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18682_high_13
NF18682_high_13
[»] chr2 (58 HSPs)
chr2 (9-136)||(34679284-34679410)
chr2 (15-129)||(6510197-6510312)
chr2 (18-135)||(14489412-14489529)
chr2 (4-117)||(19206155-19206268)
chr2 (15-131)||(37431735-37431852)
chr2 (4-118)||(6592921-6593034)
chr2 (15-127)||(15023036-15023149)
chr2 (19-131)||(35718857-35718970)
chr2 (20-136)||(18709241-18709356)
chr2 (19-135)||(34761061-34761179)
chr2 (19-110)||(4925648-4925737)
chr2 (18-117)||(31827733-31827832)
chr2 (4-131)||(43028980-43029108)
chr2 (15-117)||(14943549-14943652)
chr2 (17-95)||(44297598-44297676)
chr2 (18-118)||(16043222-16043327)
chr2 (18-107)||(44617939-44618028)
chr2 (4-117)||(5362188-5362303)
chr2 (18-118)||(5470537-5470637)
chr2 (9-108)||(27489627-27489729)
chr2 (18-132)||(32969725-32969843)
chr2 (4-71)||(39918628-39918695)
chr2 (18-129)||(4576544-4576657)
chr2 (21-127)||(36176984-36177089)
chr2 (15-118)||(18224930-18225032)
chr2 (15-127)||(25333692-25333803)
chr2 (18-129)||(5470331-5470441)
chr2 (18-127)||(25383-25499)
chr2 (23-136)||(19895607-19895723)
chr2 (24-127)||(37803337-37803443)
chr2 (18-71)||(34100801-34100854)
chr2 (21-101)||(35718676-35718756)
chr2 (15-108)||(24306037-24306131)
chr2 (18-71)||(36195651-36195703)
chr2 (21-127)||(43028797-43028904)
chr2 (24-127)||(14489217-14489321)
chr2 (40-127)||(4576765-4576851)
chr2 (18-118)||(39918446-39918548)
chr2 (21-71)||(8857250-8857300)
chr2 (45-132)||(14816024-14816113)
chr2 (206-255)||(13439255-13439304)
chr2 (4-118)||(24472458-24472574)
chr2 (18-71)||(34760908-34760961)
chr2 (39-71)||(4925500-4925532)
chr2 (57-133)||(25375114-25375190)
chr2 (21-127)||(34679100-34679208)
chr2 (21-127)||(19399377-19399486)
chr2 (22-110)||(21361900-21361990)
chr2 (214-273)||(39403721-39403779)
chr2 (9-71)||(15022899-15022960)
chr2 (42-127)||(21358328-21358416)
chr2 (23-132)||(25333497-25333607)
chr2 (200-274)||(31965740-31965814)
chr2 (77-127)||(36177351-36177401)
chr2 (18-71)||(14943745-14943798)
chr2 (55-135)||(20650365-20650446)
chr2 (20-72)||(32013262-32013314)
chr2 (39-71)||(36195785-36195817)
[»] chr4 (84 HSPs)
chr4 (12-137)||(16292462-16292588)
chr4 (9-136)||(14449267-14449396)
chr4 (19-117)||(6614860-6614958)
chr4 (4-136)||(35393855-35393989)
chr4 (18-118)||(23759573-23759674)
chr4 (18-127)||(27978899-27979007)
chr4 (18-114)||(53924763-53924860)
chr4 (18-118)||(50769563-50769663)
chr4 (4-127)||(2653956-2654082)
chr4 (17-111)||(14060775-14060869)
chr4 (15-127)||(35383768-35383878)
chr4 (4-135)||(1571594-1571725)
chr4 (15-118)||(51371661-51371765)
chr4 (4-118)||(2837086-2837203)
chr4 (18-107)||(18937265-18937354)
chr4 (4-131)||(3658111-3658239)
chr4 (15-107)||(21451644-21451736)
chr4 (21-127)||(1420538-1420645)
chr4 (15-127)||(49185756-49185869)
chr4 (4-127)||(29697708-29697832)
chr4 (19-118)||(6637078-6637178)
chr4 (18-118)||(8965534-8965634)
chr4 (24-136)||(34771266-34771378)
chr4 (17-127)||(53312486-53312596)
chr4 (15-131)||(10059681-10059800)
chr4 (18-109)||(2181325-2181417)
chr4 (19-130)||(50769363-50769476)
chr4 (18-136)||(2016988-2017108)
chr4 (20-132)||(11824398-11824514)
chr4 (19-127)||(21957668-21957778)
chr4 (74-117)||(43074629-43074672)
chr4 (74-131)||(4411484-4411541)
chr4 (39-128)||(42526171-42526259)
chr4 (18-110)||(44356598-44356691)
chr4 (15-71)||(21597462-21597518)
chr4 (19-118)||(31553250-31553347)
chr4 (41-130)||(37831592-37831683)
chr4 (15-127)||(6207179-6207293)
chr4 (9-127)||(20112342-20112460)
chr4 (18-117)||(21871587-21871685)
chr4 (18-117)||(21927448-21927546)
chr4 (21-111)||(23759777-23759868)
chr4 (18-134)||(51362739-51362858)
chr4 (4-71)||(54855494-54855561)
chr4 (45-127)||(21957542-21957624)
chr4 (18-95)||(51233677-51233752)
chr4 (18-131)||(51362535-51362653)
chr4 (39-133)||(2836896-2836992)
chr4 (18-118)||(14449484-14449587)
chr4 (18-108)||(20737434-20737526)
chr4 (15-95)||(42526000-42526081)
chr4 (18-134)||(53312282-53312401)
chr4 (36-136)||(12719445-12719544)
chr4 (18-95)||(14060903-14060982)
chr4 (23-95)||(29697559-29697631)
chr4 (18-118)||(2016803-2016905)
chr4 (18-110)||(4796056-4796149)
chr4 (20-71)||(10059899-10059950)
chr4 (21-111)||(12719648-12719741)
chr4 (4-136)||(21322701-21322835)
chr4 (4-67)||(21871445-21871507)
chr4 (4-67)||(21927306-21927368)
chr4 (39-134)||(1420765-1420862)
chr4 (19-101)||(8070844-8070926)
chr4 (18-135)||(4796240-4796357)
chr4 (66-127)||(14016723-14016784)
chr4 (18-95)||(16292305-16292382)
chr4 (18-71)||(21597602-21597655)
chr4 (4-49)||(43074671-43074716)
chr4 (18-127)||(54983851-54983957)
chr4 (46-111)||(49185590-49185656)
chr4 (18-127)||(52462988-52463098)
chr4 (39-111)||(25909506-25909580)
chr4 (39-127)||(35615317-35615407)
chr4 (200-274)||(314438-314512)
chr4 (18-95)||(8965716-8965790)
chr4 (18-71)||(6207374-6207427)
chr4 (49-111)||(19909192-19909255)
chr4 (89-126)||(21871407-21871444)
chr4 (89-126)||(21927268-21927305)
chr4 (81-110)||(35615433-35615462)
chr4 (19-71)||(11983592-11983643)
chr4 (21-136)||(21451453-21451569)
chr4 (40-132)||(41467126-41467217)
[»] chr7 (62 HSPs)
chr7 (15-118)||(20185114-20185217)
chr7 (4-127)||(4049908-4050032)
chr7 (9-127)||(8074065-8074186)
chr7 (21-127)||(36580277-36580384)
chr7 (9-127)||(17876349-17876468)
chr7 (21-133)||(18186436-18186550)
chr7 (4-127)||(18504427-18504550)
chr7 (21-127)||(3247377-3247482)
chr7 (4-127)||(5172710-5172836)
chr7 (18-127)||(28350119-28350230)
chr7 (15-131)||(35250317-35250431)
chr7 (20-118)||(28785768-28785869)
chr7 (18-127)||(14247297-14247407)
chr7 (4-134)||(19644990-19645119)
chr7 (26-110)||(24432978-24433063)
chr7 (19-110)||(28350345-28350436)
chr7 (18-111)||(15348157-15348253)
chr7 (34-136)||(20505227-20505329)
chr7 (23-133)||(23826224-23826339)
chr7 (39-136)||(6792017-6792116)
chr7 (22-129)||(23746093-23746207)
chr7 (4-116)||(21505629-21505743)
chr7 (15-71)||(28472576-28472631)
chr7 (4-96)||(40872200-40872294)
chr7 (22-127)||(47909697-47909803)
chr7 (22-118)||(3382025-3382122)
chr7 (18-71)||(15107053-15107106)
chr7 (20-127)||(41243845-41243955)
chr7 (25-132)||(45697485-45697599)
chr7 (41-127)||(9500124-9500213)
chr7 (4-127)||(11373850-11373973)
chr7 (4-71)||(11374010-11374077)
chr7 (19-111)||(48058880-48058974)
chr7 (18-127)||(6726261-6726370)
chr7 (19-95)||(3381898-3381975)
chr7 (18-127)||(15347957-15348064)
chr7 (18-134)||(18186651-18186770)
chr7 (9-65)||(15029250-15029306)
chr7 (33-134)||(45718086-45718189)
chr7 (39-118)||(3318330-3318409)
chr7 (18-110)||(15029081-15029175)
chr7 (84-127)||(21748082-21748125)
chr7 (19-127)||(44312748-44312857)
chr7 (17-71)||(10097616-10097669)
chr7 (18-111)||(36903471-36903562)
chr7 (39-132)||(41243642-41243735)
chr7 (18-108)||(13889475-13889567)
chr7 (22-110)||(14247509-14247595)
chr7 (18-134)||(20184912-20185031)
chr7 (77-134)||(21939335-21939392)
chr7 (17-127)||(24679043-24679155)
chr7 (77-133)||(20505095-20505151)
chr7 (39-71)||(40872368-40872400)
chr7 (21-132)||(15107195-15107305)
chr7 (22-110)||(21505821-21505911)
chr7 (24-134)||(4049702-4049817)
chr7 (211-273)||(6677038-6677099)
chr7 (77-127)||(6726520-6726570)
chr7 (40-110)||(28472409-28472479)
chr7 (41-130)||(46265865-46265955)
chr7 (18-118)||(35250131-35250232)
chr7 (18-71)||(36580475-36580528)
[»] chr6 (35 HSPs)
chr6 (17-131)||(1377407-1377521)
chr6 (17-131)||(1385155-1385269)
chr6 (18-111)||(2853448-2853541)
chr6 (15-127)||(33401252-33401364)
chr6 (18-136)||(238924-239041)
chr6 (18-127)||(12766415-12766525)
chr6 (19-136)||(28011327-28011444)
chr6 (18-132)||(3579593-3579708)
chr6 (9-110)||(17248833-17248936)
chr6 (4-138)||(10727182-10727318)
chr6 (13-118)||(18030949-18031052)
chr6 (18-136)||(10727394-10727514)
chr6 (15-127)||(2840792-2840906)
chr6 (24-118)||(26601666-26601761)
chr6 (18-108)||(8223782-8223872)
chr6 (15-118)||(32143448-32143553)
chr6 (18-127)||(6036647-6036758)
chr6 (26-132)||(30349563-30349672)
chr6 (4-117)||(11351829-11351942)
chr6 (20-107)||(3812949-3813034)
chr6 (9-95)||(6036852-6036938)
chr6 (18-117)||(20474905-20475005)
chr6 (18-127)||(30349352-30349462)
chr6 (18-71)||(2203352-2203405)
chr6 (82-127)||(5003092-5003137)
chr6 (22-71)||(8223937-8223986)
chr6 (18-127)||(266125-266235)
chr6 (19-71)||(17532312-17532364)
chr6 (19-110)||(33399805-33399897)
chr6 (19-110)||(266312-266403)
chr6 (18-133)||(2853615-2853733)
chr6 (22-128)||(239149-239257)
chr6 (206-255)||(9452766-9452815)
chr6 (20-53)||(23585073-23585106)
chr6 (18-71)||(32143319-32143372)
[»] chr5 (53 HSPs)
chr5 (4-137)||(3333685-3333819)
chr5 (4-127)||(32391722-32391846)
chr5 (4-127)||(36798362-36798487)
chr5 (4-135)||(2974819-2974953)
chr5 (4-131)||(3999085-3999213)
chr5 (4-133)||(12406038-12406168)
chr5 (18-130)||(28446204-28446318)
chr5 (4-117)||(6130268-6130382)
chr5 (12-136)||(20512393-20512519)
chr5 (4-127)||(22300798-22300919)
chr5 (4-127)||(40276021-40276146)
chr5 (18-133)||(35166493-35166610)
chr5 (15-131)||(19340763-19340877)
chr5 (15-130)||(25364024-25364139)
chr5 (15-131)||(43098027-43098145)
chr5 (18-119)||(16132929-16133033)
chr5 (18-135)||(20629731-20629851)
chr5 (4-127)||(24405683-24405808)
chr5 (18-134)||(27904683-27904801)
chr5 (18-127)||(39574242-39574350)
chr5 (36-127)||(35877498-35877590)
chr5 (22-127)||(25910926-25911036)
chr5 (21-127)||(37897921-37898028)
chr5 (18-127)||(43098227-43098335)
chr5 (19-95)||(19131701-19131777)
chr5 (15-71)||(30603673-30603729)
chr5 (18-118)||(3333901-3334003)
chr5 (4-71)||(21066526-21066593)
chr5 (18-71)||(9852985-9853038)
chr5 (22-135)||(24779478-24779593)
chr5 (45-133)||(6464302-6464392)
chr5 (1-72)||(37897777-37897848)
chr5 (18-117)||(12406240-12406341)
chr5 (18-127)||(31080480-31080590)
chr5 (18-95)||(36798205-36798285)
chr5 (39-109)||(20629965-20630037)
chr5 (24-69)||(31080686-31080731)
chr5 (39-111)||(40276250-40276325)
chr5 (18-95)||(16132780-16132858)
chr5 (19-132)||(24405488-24405603)
chr5 (18-136)||(25910715-25910837)
chr5 (51-118)||(26563199-26563266)
chr5 (18-63)||(2974702-2974747)
chr5 (19-136)||(8284149-8284266)
chr5 (22-71)||(9852847-9852896)
chr5 (4-127)||(18403177-18403300)
chr5 (24-108)||(30604293-30604379)
chr5 (39-109)||(32391940-32392012)
chr5 (56-110)||(34319979-34320035)
chr5 (77-130)||(40133140-40133193)
chr5 (66-110)||(26702663-26702707)
chr5 (66-110)||(26972396-26972440)
chr5 (15-71)||(39574435-39574491)
[»] chr1 (56 HSPs)
chr1 (4-127)||(39642203-39642328)
chr1 (15-127)||(23891663-23891776)
chr1 (4-127)||(3377698-3377822)
chr1 (18-133)||(41997637-41997753)
chr1 (15-135)||(23220759-23220880)
chr1 (4-133)||(25486398-25486529)
chr1 (15-132)||(12960844-12960962)
chr1 (9-127)||(50226395-50226515)
chr1 (17-131)||(1096648-1096765)
chr1 (26-131)||(50401580-50401686)
chr1 (18-118)||(14979001-14979102)
chr1 (9-106)||(45739127-45739223)
chr1 (15-133)||(18216683-18216802)
chr1 (20-136)||(25085393-25085510)
chr1 (18-127)||(3377504-3377615)
chr1 (19-127)||(6320782-6320891)
chr1 (17-107)||(46573026-46573118)
chr1 (19-131)||(46912189-46912302)
chr1 (18-109)||(45738957-45739049)
chr1 (24-118)||(27864186-27864280)
chr1 (24-131)||(16545766-16545877)
chr1 (4-136)||(7060621-7060756)
chr1 (18-71)||(17692886-17692939)
chr1 (15-127)||(17760887-17761002)
chr1 (18-71)||(30849281-30849334)
chr1 (4-71)||(15659041-15659107)
chr1 (4-129)||(6569528-6569654)
chr1 (19-117)||(49426193-49426291)
chr1 (4-132)||(1853444-1853571)
chr1 (66-134)||(5287246-5287314)
chr1 (79-127)||(18632602-18632650)
chr1 (41-117)||(16874521-16874599)
chr1 (21-109)||(48319609-48319699)
chr1 (21-112)||(17760700-17760795)
chr1 (9-71)||(39642400-39642461)
chr1 (19-127)||(14978800-14978909)
chr1 (20-117)||(25085595-25085691)
chr1 (18-70)||(8301545-8301597)
chr1 (22-136)||(16874707-16874823)
chr1 (18-106)||(18632341-18632429)
chr1 (39-71)||(30849451-30849483)
chr1 (39-71)||(46572887-46572919)
chr1 (19-71)||(50226592-50226644)
chr1 (22-129)||(44672316-44672422)
chr1 (19-127)||(1096470-1096580)
chr1 (77-127)||(51250488-51250538)
chr1 (22-71)||(12961049-12961098)
chr1 (66-111)||(46313268-46313313)
chr1 (18-71)||(46505233-46505286)
chr1 (39-131)||(7579662-7579757)
chr1 (15-71)||(7579860-7579915)
chr1 (23-135)||(16298056-16298167)
chr1 (20-68)||(32295016-32295064)
chr1 (39-71)||(44436818-44436850)
chr1 (82-130)||(46880738-46880786)
chr1 (45-118)||(46895767-46895842)
[»] chr3 (68 HSPs)
chr3 (19-136)||(38958046-38958163)
chr3 (13-134)||(46226885-46227005)
chr3 (15-135)||(4474267-4474386)
chr3 (19-127)||(19404401-19404509)
chr3 (9-127)||(47189601-47189719)
chr3 (15-127)||(17773173-17773286)
chr3 (15-127)||(19074474-19074587)
chr3 (16-134)||(28944164-28944283)
chr3 (15-132)||(3192979-3193097)
chr3 (4-127)||(14856549-14856674)
chr3 (4-118)||(14340745-14340861)
chr3 (18-136)||(51315684-51315804)
chr3 (15-127)||(54718997-54719107)
chr3 (4-132)||(28204478-28204605)
chr3 (9-118)||(86754-86866)
chr3 (15-116)||(54464360-54464464)
chr3 (19-92)||(15978893-15978966)
chr3 (19-127)||(28712663-28712772)
chr3 (18-118)||(1814562-1814662)
chr3 (18-129)||(25248887-25248998)
chr3 (18-130)||(44585986-44586100)
chr3 (15-132)||(14349309-14349424)
chr3 (15-131)||(43747278-43747395)
chr3 (21-127)||(12759506-12759618)
chr3 (19-127)||(27178143-27178252)
chr3 (1-71)||(8024835-8024905)
chr3 (9-71)||(44436449-44436511)
chr3 (4-110)||(44433074-44433183)
chr3 (41-135)||(36677519-36677614)
chr3 (41-135)||(36687601-36687696)
chr3 (19-113)||(578431-578525)
chr3 (9-71)||(25154372-25154434)
chr3 (24-118)||(52008454-52008548)
chr3 (18-118)||(35359184-35359286)
chr3 (4-127)||(53184704-53184828)
chr3 (18-111)||(54719197-54719290)
chr3 (18-127)||(25902553-25902664)
chr3 (18-127)||(33329614-33329722)
chr3 (15-71)||(44585848-44585904)
chr3 (16-64)||(51315562-51315610)
chr3 (21-127)||(48348258-48348365)
chr3 (39-109)||(8025003-8025073)
chr3 (41-134)||(42686478-42686572)
chr3 (18-132)||(578613-578727)
chr3 (39-127)||(1814775-1814864)
chr3 (18-71)||(43747480-43747533)
chr3 (18-71)||(44436598-44436651)
chr3 (21-117)||(3916640-3916734)
chr3 (4-64)||(36566941-36567001)
chr3 (21-95)||(7218188-7218263)
chr3 (25-95)||(28712490-28712561)
chr3 (55-136)||(14992857-14992939)
chr3 (18-131)||(33329817-33329937)
chr3 (18-95)||(38957880-38957960)
chr3 (15-116)||(43586582-43586681)
chr3 (19-72)||(3192832-3192885)
chr3 (56-117)||(38177191-38177252)
chr3 (18-71)||(44433264-44433317)
chr3 (18-134)||(86571-86687)
chr3 (15-71)||(25902463-25902518)
chr3 (39-95)||(43586782-43586838)
chr3 (21-71)||(44624833-44624883)
chr3 (18-71)||(7218351-7218404)
chr3 (18-71)||(14340934-14340987)
chr3 (18-111)||(14856756-14856849)
chr3 (66-127)||(20432193-20432254)
chr3 (19-95)||(44127547-44127626)
chr3 (78-127)||(53254966-53255015)
[»] scaffold0062 (1 HSPs)
scaffold0062 (18-118)||(46088-46190)
[»] chr8 (61 HSPs)
chr8 (9-127)||(17070910-17071029)
chr8 (9-127)||(17577243-17577362)
chr8 (18-130)||(27545556-27545669)
chr8 (9-127)||(41487203-41487323)
chr8 (4-133)||(25144129-25144257)
chr8 (15-136)||(39889766-39889887)
chr8 (26-118)||(33298545-33298635)
chr8 (20-115)||(14880537-14880633)
chr8 (15-127)||(35213034-35213145)
chr8 (15-117)||(9762398-9762500)
chr8 (16-118)||(22192314-22192417)
chr8 (18-136)||(20853372-20853490)
chr8 (19-110)||(26824034-26824126)
chr8 (1-132)||(23702121-23702256)
chr8 (17-131)||(45456965-45457079)
chr8 (19-118)||(6807185-6807284)
chr8 (4-108)||(3676141-3676245)
chr8 (18-106)||(30539191-30539281)
chr8 (18-134)||(41487410-41487527)
chr8 (21-136)||(29657904-29658018)
chr8 (4-71)||(30539049-30539116)
chr8 (22-108)||(22192502-22192588)
chr8 (19-111)||(37940106-37940198)
chr8 (46-118)||(16982638-16982712)
chr8 (41-103)||(29791223-29791288)
chr8 (47-127)||(37813165-37813247)
chr8 (18-131)||(37263357-37263475)
chr8 (18-103)||(32768452-32768536)
chr8 (18-71)||(37813291-37813344)
chr8 (39-95)||(32071236-32071291)
chr8 (4-71)||(22846628-22846695)
chr8 (20-108)||(45177223-45177313)
chr8 (4-71)||(45177394-45177461)
chr8 (18-127)||(18092914-18093023)
chr8 (24-127)||(20228234-20228338)
chr8 (18-72)||(20853579-20853633)
chr8 (45-118)||(28349535-28349609)
chr8 (13-71)||(29657764-29657822)
chr8 (39-127)||(23702356-23702445)
chr8 (22-95)||(37939949-37940021)
chr8 (40-96)||(42218466-42218523)
chr8 (74-134)||(9498905-9498965)
chr8 (40-133)||(41602833-41602928)
chr8 (21-127)||(521647-521753)
chr8 (45-141)||(1003772-1003869)
chr8 (24-71)||(21486857-21486904)
chr8 (20-71)||(22846504-22846555)
chr8 (49-129)||(25896991-25897073)
chr8 (19-134)||(27545340-27545453)
chr8 (45-117)||(45163687-45163761)
chr8 (18-127)||(29044747-29044856)
chr8 (21-71)||(44269182-44269232)
chr8 (18-71)||(3676328-3676381)
chr8 (16-118)||(17512109-17512213)
chr8 (39-108)||(37263559-37263627)
chr8 (66-111)||(38612238-38612283)
chr8 (66-111)||(38613411-38613456)
chr8 (39-71)||(16982831-16982863)
chr8 (39-111)||(17071842-17071913)
chr8 (39-111)||(17576360-17576431)
chr8 (15-71)||(44101350-44101406)
[»] scaffold0025 (2 HSPs)
scaffold0025 (15-118)||(19052-19156)
scaffold0025 (18-71)||(19229-19282)
[»] scaffold0417 (1 HSPs)
scaffold0417 (16-132)||(9534-9653)
[»] scaffold0372 (2 HSPs)
scaffold0372 (15-107)||(309-401)
scaffold0372 (21-136)||(118-234)
[»] scaffold0328 (2 HSPs)
scaffold0328 (4-133)||(9607-9733)
scaffold0328 (18-128)||(9414-9525)
[»] scaffold0248 (2 HSPs)
scaffold0248 (15-118)||(606-712)
scaffold0248 (18-112)||(420-517)
[»] scaffold0137 (2 HSPs)
scaffold0137 (19-117)||(20121-20219)
scaffold0137 (9-71)||(19974-20035)
[»] scaffold0041 (2 HSPs)
scaffold0041 (4-96)||(93988-94082)
scaffold0041 (39-71)||(93882-93914)
[»] scaffold0015 (1 HSPs)
scaffold0015 (20-95)||(77063-77140)
[»] scaffold0809 (1 HSPs)
scaffold0809 (15-136)||(2746-2869)
[»] scaffold0150 (1 HSPs)
scaffold0150 (18-118)||(9567-9664)
[»] scaffold0194 (2 HSPs)
scaffold0194 (43-118)||(24905-24985)
scaffold0194 (39-71)||(25120-25152)
[»] scaffold0166 (1 HSPs)
scaffold0166 (22-135)||(21861-21976)
[»] scaffold0067 (1 HSPs)
scaffold0067 (24-68)||(4220-4264)
[»] scaffold0011 (2 HSPs)
scaffold0011 (18-86)||(145555-145623)
scaffold0011 (18-110)||(145373-145467)
[»] scaffold1458 (1 HSPs)
scaffold1458 (66-132)||(1469-1535)
[»] scaffold0515 (1 HSPs)
scaffold0515 (66-132)||(3637-3703)
[»] scaffold0306 (1 HSPs)
scaffold0306 (66-132)||(3637-3703)
[»] scaffold0016 (1 HSPs)
scaffold0016 (15-71)||(203249-203305)
[»] scaffold0250 (1 HSPs)
scaffold0250 (25-127)||(3575-3680)


Alignment Details
Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 34679284 - 34679410
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagg 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||  || |||||||||||| |||||||||||||||||||    
T  34679284 ttggctttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtttttt-ttagggggccaaaatcacaacttcgtgaaagttagg 34679382  T
Q  109 gggcgaaaaccgttattaaacctaaaaa 136  Q
    |||| ||||| | |||||| || |||||    
T  34679383 gggcaaaaactgctattaagccaaaaaa 34679410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 6510197 - 6510312
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| || || ||||||||||||||||| |||||||||| |||||    
T  6510197 ttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtagcttttttcttagggtgccaaaatcgcaacttcatgaaagttagagggcg 6510296  T
Q  114 aaaaccgttattaaac 129  Q
    ||||| | ||||||||    
T  6510297 aaaactgctattaaac 6510312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 14489412 - 14489529
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||||| | ||||||||||||||||||  | ||||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||    
T  14489412 gggggccaaaactgccacagttgcaaaacttagggggtgattttgtagtttttttcttaggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 14489511  T
Q  118 ccgttattaaacctaaaa 135  Q
    | | |||||| |||||||    
T  14489512 ctgctattaagcctaaaa 14489529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 19206268 - 19206155
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaag 103  Q
    |||| ||||| |||||||||||||||||||| ||||| ||||||||||||  ||||||||||||||||  || ||||||||||||||||||| ||||||     
T  19206268 aaaaattggccttggggggccaaaactgctacagttgtaaaacttagggggtggttttgtagtttttttttagggggccaaaatcgcaactttgtgaaaa 19206169  T
Q  104 ttagggggcgaaaa 117  Q
    ||||||||||||||    
T  19206168 ttagggggcgaaaa 19206155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 37431735 - 37431852
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||||||||||||||||| | || | ||||||||||||||||||||| |||||||||||||    
T  37431735 ttggggggccaaaaatgctacagttgcaaaacttaaggggcggttttgtagtttttttcttaggaggccaaaatcgcaacttcgtggaagttagggggcg 37431834  T
Q  114 aaaaccgttattaaacct 131  Q
    ||||| | ||||||||||    
T  37431835 aaaactgctattaaacct 37431852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 6592921 - 6593034
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaag 103  Q
    |||| |||||||||||| ||||||||||||| |||||||||||||||||| | |||||||||||||||   | ||||| |||||||||||||||||||||    
T  6592921 aaaaattggctttgggg-gccaaaactgctacagttgcaaaacttagggggcagttttgtagttttttttaagggggctaaaatcgcaacttcgtgaaag 6593019  T
Q  104 ttagggggcgaaaac 118  Q
    ||||| |||||||||    
T  6593020 ttaggtggcgaaaac 6593034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 15023036 - 15023149
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||||||||| ||||||| || |||| ||||||| ||||||| |||||||||||||||     
T  15023036 ttggggggccaaaattgctacagttacaaaacttaggggacggttttgtagtttttttcttagggggtcaaaatcacaacttcttgaaagttagggggcc 15023135  T
Q  114 aaaaccgttattaa 127  Q
    ||||| | ||||||    
T  15023136 aaaactgctattaa 15023149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 35718857 - 35718970
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| | || | |  ||| ||||||||||||||||||||||| |||| |||    
T  35718857 ggggccaaaactgctacagttgcaaaacttaggggacggttttgtagtttttttcttaggagatcaagatcgcaacttcgtgaaagttaggaggcggaaa 35718956  T
Q  118 ccgttattaaacct 131  Q
    | | ||||||||||    
T  35718957 ctgctattaaacct 35718970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 18709356 - 18709241
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||||  || | ||||||||||| |||||||||||||||||||| |||||||     
T  18709356 gggccaaaactgctatagttgcaaaacttagggggtgattttgtagtttttt-ttaggaggccaaaatcgaaacttcgtgaaagttaggggacgaaaact 18709258  T
Q  120 gttattaaacctaaaaa 136  Q
    | |||||| || |||||    
T  18709257 gctattaagccaaaaaa 18709241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 34761061 - 34761179
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    |||||||||||||||| | |||||||||||||| | |||||||||||||  ||||| || || |  |||||||||||||||||||||||||||| |||||    
T  34761061 ggggccaaaactgctacaattgcaaaacttaggtggcggttttgtagttctttttcttaaggagttaaaatcgcaacttcgtgaaagttaggggacgaaa 34761160  T
Q  117 accgttattaaacctaaaa 135  Q
    || | ||||||||||||||    
T  34761161 actgctattaaacctaaaa 34761179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 4925648 - 4925737
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||||||  || | ||||||||||||||||||||||||||||||||    
T  4925648 ggggccaaaactgctacagttgcaaaacttagggg-cgattttgtagttttttt-taggaggccaaaatcgcaacttcgtgaaagttagggg 4925737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 31827733 - 31827832
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||||||| ||||||||||||||||||  | ||||||| ||||||| || | || || |||||||||||||| ||||||||||||||||||    
T  31827733 gggggccaaaactgctacagttgcaaaacttagggggtgattttgtatttttttcttaggaggtcataatcgcaacttcgtaaaagttagggggcgaaaa 31827832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 43028980 - 43029108
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| ||| |||||||||||||||| | ||| |||||||||||| |||||||||||  ||||||| || ||||||||||||||||||| |||||    
T  43028980 aaaaattggccttgtggggccaaaactgctacaattgtaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgtgaa 43029079  T
Q  102 agttagggggcgaaaaccgttattaaacct 131  Q
    |||||  |||| ||||| | ||||||||||    
T  43029080 agtta-agggcaaaaactgctattaaacct 43029108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 14943652 - 14943549
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttagggga-cggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||| ||| ||||| ||||| ||||||||||||||||||  |||||||||||||||||| || || | ||||||| |||||||||||||||||||||||     
T  14943652 ttggtgggtcaaaattgctacagttgcaaaacttaggggtgcggttttgtagttttttcttagggtgtcaaaatcacaacttcgtgaaagttagggggca 14943553  T
Q  114 aaaa 117  Q
    ||||    
T  14943552 aaaa 14943549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 44297676 - 44297598
Alignment:
Q  17 ggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaactt 95  Q
    |||||||||||||||||| |||| ||||||||||||| | |||||||||||||||  || |||||||||||||||||||    
T  44297676 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtagtttttttttagggggccaaaatcgcaactt 44297598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 16043222 - 16043327
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttt-----tcatatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    ||||||||||||||| | || |||||||| |||||| ||||| ||||||||||     || || ||||||||||||| ||||||||||||||||||||||    
T  16043222 gggggccaaaactgccacagatgcaaaacatagggggcggttctgtagtttttcttcttcttagggggccaaaatcgtaacttcgtgaaagttagggggc 16043321  T
Q  113 gaaaac 118  Q
    ||||||    
T  16043322 gaaaac 16043327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 44617939 - 44618028
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttag 107  Q
    ||||||||||||||| | |  ||||||||||||||| |||||||||| ||||||| || ||| |||||||||||||||| ||||||||||    
T  44617939 gggggccaaaactgccacaaatgcaaaacttagggggcggttttgtaattttttcttaagggaccaaaatcgcaacttcttgaaagttag 44618028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 5362303 - 5362188
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||||||||||| |||||||||| | |  || || |||||| |   ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  5362303 aaaaattggctttgggggaccaaaactgcgacaactgtaacacttagagagaggttttgtagttttttttcttatggggccaaaatcgcaactttgtgaa 5362204  T
Q  102 agttagggggcgaaaa 117  Q
    ||||||||||||||||    
T  5362203 agttagggggcgaaaa 5362188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 5470537 - 5470637
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||||| | || || |||||||| ||| |||||||||||||||||  || |||||||||||||||||||   |||||||||||||| ||||    
T  5470537 gggggccaaaactgccacagatgtaaaacttaaggggcggttttgtagtttttttttagggggccaaaatcgcaactttaggaaagttagggggctaaaa 5470636  T
Q  118 c 118  Q
    |    
T  5470637 c 5470637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 27489627 - 27489729
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagtt 105  Q
    ||||| |||||||| ||||||||||| |||||||||||||||||  | |||||||||||||||   | || | ||||||||||||||||||||||||| |    
T  27489627 ttggccttggggggtcaaaactgctacagttgcaaaacttagggagcagttttgtagtttttttttcttaggaggccaaaatcgcaacttcgtgaaagat 27489726  T
Q  106 agg 108  Q
    |||    
T  27489727 agg 27489729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 32969725 - 32969843
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgt-agttttttcat---atggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||  |   | ||||| ||||||| |||| ||||||||||||||||||    
T  32969725 gggggccaaaactgctactgttgcaaaacttagggggcggttttgtaagtttttttttttcagggggctaaaatcgaaactccgtgaaagttagggggcg 32969824  T
Q  114 aaaaccgttattaaaccta 132  Q
    ||||| | |||||| ||||    
T  32969825 aaaactgctattaagccta 32969843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 39918628 - 39918695
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||| ||||| |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  39918628 aaaaattggccttggggggccaaaattgctacagttgcaaaacttagggggcggttttgtagtttttt 39918695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 4576657 - 4576544
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||  ||||| || |||||||||||  |||||| |  ||||||||| ||| ||    
T  4576657 gggggccaaaactgctacagttgcaaaacttatgggacgattttgtagttttttttcttagggggccaaaatgacaactttgaaaaagttaggaggctaa 4576558  T
Q  116 aaccgttattaaac 129  Q
    ||| | ||||||||    
T  4576557 aactgctattaaac 4576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 36177089 - 36176984
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccg 120  Q
    |||||||||||| ||||  ||||||||||||||  ||||||||||||||||  || ||||| |||||||||||||||||||| |||| |||| ||||| |    
T  36177089 ggccaaaactgccataggggcaaaacttagggggtggttttgtagtttttt-ttagggggctaaaatcgcaacttcgtgaaacttagagggctaaaactg 36176991  T
Q  121 ttattaa 127  Q
     ||||||    
T  36176990 ctattaa 36176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 18224930 - 18225032
Alignment:
Q  15 ttggggggccaaaac-tgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    ||||||||||||||| ||||| | |||||||||||| | | || ||||||||||||||| || |||| ||||||||||||||||| |||||| |||||||    
T  18224930 ttggggggccaaaacctgctacaattgcaaaacttaagaggcgattttgtagttttttctta-ggggtcaaaatcgcaacttcgtaaaagtt-gggggcg 18225027  T
Q  114 aaaac 118  Q
    |||||    
T  18225028 aaaac 18225032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 25333692 - 25333803
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||| ||||||||||||||| ||| | |||||||| | | |||||||||||||||||  || |||| ||||||||||| ||||| |||||||| ||||||    
T  25333692 ttggagggccaaaactgctacagtggtaaaacttatgaggcggttttgtagtttttt-ttagggggtcaaaatcgcaatttcgttaaagttagagggcga 25333790  T
Q  115 aaaccgttattaa 127  Q
    ||||  |||||||    
T  25333791 aaactattattaa 25333803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 5470441 - 5470331
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||||||| | |||||||||||||||| | |||||||||||||||  ||  ||   |||||||||||||||||||| | ||||| ||||||    
T  5470441 gggggccaaaactgctacaattgcaaaacttagggggcagttttgtagtttttt-ttagaggataaaaatcgcaacttcgtgaaaataaggggacgaaaa 5470343  T
Q  118 ccgttattaaac 129  Q
    | | ||||||||    
T  5470342 ctgctattaaac 5470331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 25499 - 25383
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttt-------ttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||| ||||||||| | || ||||||||||||||| |||||||||||||||       ||| || ||||||||||||| ||||| | ||||||||||||    
T  25499 gggggtcaaaactgccacaggtgcaaaacttagggggcggttttgtagtttttttcttcttcttagggggccaaaatcgtaactttgggaaagttagggg 25400  T
Q  111 gcgaaaaccgttattaa 127  Q
    || ||||| ||||||||    
T  25399 gcaaaaactgttattaa 25383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 19895723 - 19895607
Alignment:
Q  23 ccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    ||||||||||||||||||||||||||| ||  || |||| |||||||||   | || ||| |||||||||||| ||||| ||||||||||| |||||||     
T  19895723 ccaaaactgctatagttgcaaaacttatggtgcgattttatagtttttttttcttaggggaccaaaatcgcaatttcgtaaaagttaggggacgaaaact 19895624  T
Q  120 gttattaaacctaaaaa 136  Q
    | |||||| || |||||    
T  19895623 gatattaagccaaaaaa 19895607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 37803337 - 37803443
Alignment:
Q  24 caaaactgctatagttgcaaaacttaggggacggttttgtagtttttt----catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    ||||||||||| |||||||||||||| ||| |||||| ||||||||||    | || | || ||||||||||||||||| ||||||||||||||||||      
T  37803337 caaaactgctacagttgcaaaacttatggg-cggtttcgtagttttttttttcttaggaggtcaaaatcgcaacttcgtaaaagttagggggcgaaaatt 37803435  T
Q  120 gttattaa 127  Q
    ||||||||    
T  37803436 gttattaa 37803443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 34100854 - 34100801
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  34100854 gggggtcaaaactgctacagttgcaaaacttaggggacggttttatagtttttt 34100801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 35718756 - 35718676
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||||||||||| | || |||||||  ||||||||||||||||||||||||  |  |||||||||||| ||||||||||||    
T  35718756 ggccaaaactgccacagatgcaaaatgtaggggacggttttgtagtttttttcttaggggccaaaatcacaacttcgtgaa 35718676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 24306131 - 24306037
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagg 108  Q
    |||||| | |||||||| || |||||||||||||||  ||||||||||||||||||| | ||  || | |||||||||||||||| |||||||||    
T  24306131 ttggggaggcaaaactgttacagttgcaaaacttagaagacggttttgtagtttttttcttagaggactaaaatcgcaacttcgtaaaagttagg 24306037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 36195703 - 36195651
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  36195703 gggggccaaaactgctacagttgcaaa-cttagggggcggttttgtagtttttt 36195651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 43028904 - 43028797
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||||||||||| | || |||||||||||||||  ||||||||||||||||  | || ||||||||||||||||||| |   |||||||||||| |||||    
T  43028904 ggccaaaactgccacagatgcaaaacttaggggg-ggttttgtagttttttttcttagggggccaaaatcgcaactttggagaagttagggggctaaaac 43028806  T
Q  119 cgttattaa 127  Q
     | ||||||    
T  43028805 tgctattaa 43028797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 14489321 - 14489217
Alignment:
Q  24 caaaactgctatagttgcaaaacttaggggacggttttgt-agttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgtt 122  Q
    ||||||||| | || ||||||||||||||| ||||||||| | ||||||| || |||||||||||| ||||||   ||||||||| |||| ||||| | |    
T  14489321 caaaactgccacaggtgcaaaacttagggggcggttttgtaatttttttcttaaggggccaaaatcacaacttttggaaagttagagggctaaaactgct 14489222  T
Q  123 attaa 127  Q
    |||||    
T  14489221 attaa 14489217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 4576765 - 4576851
Alignment:
Q  40 gcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    |||||||||| |||||  ||||||||||||||  || ||||||||||||||||||| | |||||||||||| | ||||| | ||||||    
T  4576765 gcaaaacttaagggacaattttgtagttttttattaaggggccaaaatcgcaactttg-gaaagttaggggtctaaaactgctattaa 4576851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 39918548 - 39918446
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    |||||||||||| || | |  |||||||||||| || || ||||| ||||||||  | || ||||||||||||||||||| | |||||||||||||| ||    
T  39918548 gggggccaaaacagccacatatgcaaaacttagcgggcgattttgcagttttttttcttagggggccaaaatcgcaactttgagaaagttagggggctaa 39918449  T
Q  116 aac 118  Q
    |||    
T  39918448 aac 39918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 8857250 - 8857300
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||||||||||||||||| ||| |  ||||||||||||||    
T  8857250 ggccaaaactgctatagttgcaaaacttatggggcaattttgtagtttttt 8857300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 14816024 - 14816113
Alignment:
Q  45 acttaggggacggttttgtagttttttca--tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaaccta 132  Q
    ||||||||| |||||||||||||| || |  || |||||||||||||||||||| |||||  |||||||| ||||| | |||||| ||||    
T  14816024 acttagggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagccta 14816113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 13439255 - 13439304
Alignment:
Q  206 tacattgagtttgatcatcacattaaactaagggaaatcatacaagtgag 255  Q
    ||||||||||||||||||||||||| |||||| |||  ||||||||||||    
T  13439255 tacattgagtttgatcatcacattagactaagagaatccatacaagtgag 13439304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 24472574 - 24472458
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| ||| || ||||||||||||| |||| |||||||||||||||  ||||| ||  ||||||| || | ||||||||| |||| ||||| ||    
T  24472574 aaaaattggccttgaggagccaaaactgctacagttacaaaacttaggggacatttttgcagttttttttcttaagaggccaaaattgcaaattcgtaaa 24472475  T
Q  102 agttagggggcgaaaac 118  Q
    | ||||||  |||||||    
T  24472474 aattagggtacgaaaac 24472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 34760961 - 34760908
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| | |  ||||||||||||||| |||||||||||||||||    
T  34760961 gggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtttttt 34760908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 4925532 - 4925500
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||||||||||||||||||||||    
T  4925532 tgcaaaacttaggggacggttttgtagtttttt 4925500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 25375114 - 25375190
Alignment:
Q  57 gttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaa 133  Q
    |||||||||||||||| || ||||||||||||||||| | |  ||| ||||||||| ||||| | |||||| |||||    
T  25375114 gttttgtagttttttcttagggggccaaaatcgcaacattgaaaaaattagggggctaaaactgctattaagcctaa 25375190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 34679208 - 34679100
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttagggga-cggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||||||||||| | |  |||||||||||||||  |||||||||| |||||| | || | ||||||||||||||||| |  ||||||||||||| |||||    
T  34679208 ggccaaaactgccacatgtgcaaaacttaggggggcggttttgtaatttttttcttaggtggccaaaatcgcaactttggaaaagttagggggctaaaac 34679109  T
Q  119 cgttattaa 127  Q
     | ||||||    
T  34679108 tgctattaa 34679100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 19399377 - 19399486
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||| |||  |||| |||||||||||  ||||||||||||||||||||   | || ||| |||||||| |||||| |  ||||||||||||| ||||    
T  19399377 ggccaaagctgacataggtgcaaaacttaatggacggttttgtagttttttttacttaagggaccaaaatcacaactttgaaaaagttagggggctaaaa 19399476  T
Q  118 ccgttattaa 127  Q
    | | ||||||    
T  19399477 ctgctattaa 19399486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 21361990 - 21361900
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||| | |  |||||||||||||||  | ||||||||||||||  | || ||||||||||||||||||| |  |||||||||||    
T  21361990 gccaaaactgccacatgtgcaaaacttagggggtgtttttgtagttttttttcttaaggggccaaaatcgcaactttgataaagttagggg 21361900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 39403721 - 39403779
Alignment:
Q  214 gtttgatcatcacattaaactaagggaaatcatacaagtgagattaatatcagatcttca 273  Q
    ||||||||| ||||||| |||||| |||| || ||||||||||||||||||| |||||||    
T  39403721 gtttgatcaccacattacactaagagaaa-caaacaagtgagattaatatcatatcttca 39403779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 15022960 - 15022899
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||| |||||||||||||||||| | |  ||||||| ||||||| |||||||||||||||||    
T  15022960 ttggccttggggggccaaaactgccacaaatgcaaaatttagggg-cggttttgtagtttttt 15022899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 21358328 - 21358416
Alignment:
Q  42 aaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    |||||||||| | ||||||| |||||||||   | || |||||||||||| |||||| | |||||||||||||| ||||| | ||||||    
T  21358328 aaaacttaggaggcggttttatagtttttttttcttagggggccaaaatcacaactttgagaaagttagggggcaaaaactgctattaa 21358416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 25333607 - 25333497
Alignment:
Q  23 ccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgt 121  Q
    |||||||||| | || |||||||||||||||  |||||| ||| ||||||| || ||| ||||||||||||||| |  ||||||| ||||  ||||  ||    
T  25333607 ccaaaactgccacaggtgcaaaacttagggggtggttttatagtttttttcttaagggaccaaaatcgcaactttggaaaagttaaggggttaaaattgt 25333508  T
Q  122 tattaaaccta 132  Q
    |||||| ||||    
T  25333507 tattaagccta 25333497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 274
Target Start/End: Original strand, 31965740 - 31965814
Alignment:
Q  200 ggatcgtacattgagtttgatcatcacattaaactaagggaaatcatacaagtgagattaatatcagatcttcac 274  Q
    ||||| |||| ||||||| |||| || |||| |||||| || ||||||||||||||||| |||||| || |||||    
T  31965740 ggatcttacactgagttttatcaccatattagactaagagatatcatacaagtgagattgatatcacatattcac 31965814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 36177351 - 36177401
Alignment:
Q  77 ggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    |||||||||||||||||||| ||||| ||| ||||| ||||| ||||||||    
T  36177351 ggggccaaaatcgcaacttcttgaaacttaaggggctaaaactgttattaa 36177401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 14943745 - 14943798
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||| ||| | || |||||||||||| || |||||||||||||||||    
T  14943745 gggggccaaaaatgccacaggtgcaaaacttagagggcggttttgtagtttttt 14943798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 20650446 - 20650365
Alignment:
Q  55 cggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaaa 135  Q
    |||||||||| || ||||| || |||||||||||| ||||||| ||||| ||||||||| ||||| | ||| || |||||||    
T  20650446 cggttttgtaattattttcttagggggccaaaatctcaacttcttgaaacttagggggctaaaactgctatgaagcctaaaa 20650365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 32013262 - 32013314
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttc 72  Q
    ||||||||||||||| | |||||||||||||| |||  |||| ||||||||||    
T  32013262 gggccaaaactgctacatttgcaaaacttaggagacaattttatagttttttc 32013314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 36195785 - 36195817
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| |||||||||||||||||    
T  36195785 tgcaaaacttagggggcggttttgtagtttttt 36195817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 6e-37; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 16292462 - 16292588
Alignment:
Q  12 gctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatg-gggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||  | || |||  ||||||||||||||||||||||||||||    
T  16292462 gctttggggggccaaaactactacagttgcaaaacttaggggacgattttgtagtttttttttctgagggtaaaaatcgcaacttcgtgaaagttagggg 16292561  T
Q  111 gcgaaaaccgttattaaacctaaaaag 137  Q
    |||||||  ||||||||||||||||||    
T  16292562 gcgaaaattgttattaaacctaaaaag 16292588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 14449396 - 14449267
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaaagtta 106  Q
    ||||| ||||||||||||||||| |||||||||||||||||  |||| |||||||||||  ||||| || |||||||||||| |||||||||||||||||    
T  14449396 ttggcattggggggccaaaactggtatagttgcaaaacttaaaggacagttttgtagttgtttttcttagggggccaaaatctcaacttcgtgaaagtta 14449297  T
Q  107 gggggcgaaaaccgttattaaacctaaaaa 136  Q
    |||||||||||| | |||||||| ||||||    
T  14449296 gggggcgaaaactgctattaaacttaaaaa 14449267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 6614958 - 6614860
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||||||||||| ||| ||||||    
T  6614958 ggggccaaaactgctacagttgcaaaacttaggggatggttttgtagttttttcttaaggagccaaaatcgcaacttcgtgaaagttaagggtcgaaaa 6614860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 35393855 - 35393989
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| |||||||||||||||||||| |||| |||||| |||||| |||||||||||||||||  | ||  || |||||||||||||||||||||    
T  35393855 aaaaattggccttggggggccaaaactgctacagttacaaaacctagggggcggttttgtagttttttttcttagaggtccaaaatcgcaacttcgtgaa 35393954  T
Q  102 agttagggggcgaaaaccgttattaaacctaaaaa 136  Q
    |||||||||| |||||| | |||||| ||||||||    
T  35393955 agttagggggtgaaaactgctattaagcctaaaaa 35393989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 23759674 - 23759573
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||| || |||||||||||||||||||  |||||||||||||||||||    
T  23759674 gggggccaaaactactacagttgcaaaatttaggggacggttttgtagtttttttcttaaggggccaaaatcgcaactttatgaaagttagggggcgaaa 23759575  T
Q  117 ac 118  Q
    ||    
T  23759574 ac 23759573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 27978899 - 27979007
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||| ||||||||||||||||||    
T  27978899 gggggtcaaaactgctagagttgtaaaacttaggggacggttttgtagtttttt-ttaaagggccaaaatcgcaacttcgttaaagttagggggcgaaaa 27978997  T
Q  118 ccgttattaa 127  Q
      ||||||||    
T  27978998 atgttattaa 27979007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 53924860 - 53924763
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgt-agttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| || |||| ||||||| |||||||||||||||||||||||||    
T  53924860 gggggccaaaactgctacagttgcaaaacttaggggacggttttgtaatttttttcttaaggggtcaaaatcacaacttcgtgaaagttagggggcga 53924763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 50769563 - 50769663
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||||||| |||||||||||||||  | ||||||| |||||||||  || |||||||||||||||||||||| ||||||||||||||||||    
T  50769563 gggggccaaaactgctacagttgcaaaacttagtaggcggttttatagtttttttttagggggccaaaatcgcaacttcgtaaaagttagggggcgaaaa 50769662  T
Q  118 c 118  Q
    |    
T  50769663 c 50769663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 2654082 - 2653956
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttt--tcat-atggggccaaaatcgcaacttcgtga 100  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||  || | | |||||||||||||||||||||| |    
T  2654082 aaaaattggctttggggggccaaaactgctacagttgcaaaacttaggagatggttttgtagttttttatcttaagggggccaaaatcgcaacttcgtaa 2653983  T
Q  101 aagttagggggcgaaaaccgttattaa 127  Q
    |||||||| ||| ||||| | ||||||    
T  2653982 aagttaggaggcaaaaactgctattaa 2653956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 14060869 - 14060775
Alignment:
Q  17 ggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || |||| |||||||||||||| |  ||||||||||||    
T  14060869 ggggggccaaaactgctatagttgcaaagcttagggggcggttttgtagttttttcttagggggtcaaaatcgcaactttgaaaaagttaggggg 14060775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 35383878 - 35383768
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||||||||||||| ||||| ||| |||||||||||||| || ||||||||||||||  || |||||||||||| |||||||||||||||||||||||||    
T  35383878 ttggggggccaaaagtgctacagtggcaaaacttagggg-cgattttgtagttttttt-tagggggccaaaatcacaacttcgtgaaagttagggggcga 35383781  T
Q  115 aaaccgttattaa 127  Q
    |||| | ||||||    
T  35383780 aaactgctattaa 35383768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 1571594 - 1571725
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaa 102  Q
    |||| ||||| || ||||||||||||||| | |||||||||||||| |||  | |||||||||||||| | |||| ||||||||||||||||||||||||    
T  1571594 aaaaattggccttagggggccaaaactgccacagttgcaaaacttatgggt-gattttgtagtttttttcttatgaggccaaaatcgcaacttcgtgaaa 1571692  T
Q  103 gttagggggcgaaaaccgttattaaacctaaaa 135  Q
    ||||||  | |||||| |||||||| |||||||    
T  1571693 gttaggacgtgaaaactgttattaagcctaaaa 1571725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 51371661 - 51371765
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcat-atggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    ||||||||||||||| |||||||||  |||||||| ||||||||||||| |||||||  | | ||| ||||||||||||||||| |||||||||||||||    
T  51371661 ttggggggccaaaacggctatagtttaaaaacttaagggacggttttgttgtttttttttaaagggaccaaaatcgcaacttcgagaaagttagggggcg 51371760  T
Q  114 aaaac 118  Q
    |||||    
T  51371761 aaaac 51371765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 2837086 - 2837203
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtga 100  Q
    |||| ||||| |||| ||||||||||||||| | ||| |||||||||||| |||||||||||   ||||||| || ||||||||||| |||||||| |||    
T  2837086 aaaaattggccttggagggccaaaactgctacaattgtaaaacttagggggcggttttgtagcttttttttcttagggggccaaaattgcaacttcttga 2837185  T
Q  101 aagttagggggcgaaaac 118  Q
    |||||| |||||||||||    
T  2837186 aagttaaggggcgaaaac 2837203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 18937354 - 18937265
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttag 107  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| || ||||||  || | ||||||||| |||||||||||||||||||    
T  18937354 gggggccaaaactgctacagttgcaaaacttaggggacgattttataatttttttttaggaggccaaaattgcaacttcgtgaaagttag 18937265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 3658111 - 3658239
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaa 102  Q
    |||| ||||| |||||| ||||||||||||| ||||||||||||||| |||| ||||| ||| ||||||| || |||  ||||||||||||||| | |||    
T  3658111 aaaaattggccttggggagccaaaactgctacagttgcaaaacttagaggacagttttttagtttttttcttaagggatcaaaatcgcaacttcataaaa 3658210  T
Q  103 gttagggggcgaaaaccgttattaaacct 131  Q
    ||||| || ||||||| | ||||||||||    
T  3658211 gttagaggacgaaaactgctattaaacct 3658239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 21451644 - 21451736
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttag 107  Q
    ||||||||||||| |||||| ||||| ||||||||||| |||||||| |||||||||| || |||||||||| |||||||| | |||||||||    
T  21451644 ttggggggccaaagctgctacagttgtaaaacttagggaacggttttatagttttttcttagggggccaaaagcgcaactttgggaaagttag 21451736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 1420645 - 1420538
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatgg-ggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||  |  || ||||||||||||||||| |  ||||||||||||| |||||     
T  1420645 ggccaaaactgatatagttgcaaaacttagggggcggttttgtagttttttttttaggaggccaaaatcgcaactttggaaaagttagggggctaaaact 1420546  T
Q  120 gttattaa 127  Q
    | ||||||    
T  1420545 gctattaa 1420538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 49185756 - 49185869
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    |||||||||||||||| | | |||||||||||||| ||| |||||||||||  ||||||| || ||||||||||||||||||| ||||||||| |||||     
T  49185756 ttggggggccaaaactacaacagttgcaaaacttaaggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgtgaaagtt-gggggt 49185854  T
Q  113 gaaaaccgttattaa 127  Q
    |||||| | ||||||    
T  49185855 gaaaactgctattaa 49185869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 29697708 - 29697832
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| || |||| |||||||| ||| |||||||||||||||||||||| |||||||||||||  | || ||| |||||||||||||||| ||||    
T  29697708 aaaaattggccttaggggaccaaaactactacagttgcaaaacttaggggacgggtttgtagttttttttctta-gggaccaaaatcgcaacttcatgaa 29697806  T
Q  102 agttagggggcgaaaaccgttattaa 127  Q
    ||||||| || |||||| | ||||||    
T  29697807 agttaggaggtgaaaactgctattaa 29697832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 6637178 - 6637078
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgt-agttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||| |||||| |||| |||||||||||||| ||||||||||||| | ||||||| || ||| ||||||||||||| |||||||||||| ||||| ||||    
T  6637178 ggggtcaaaaccgctacagttgcaaaacttaagggacggttttgtaatttttttcttaggggaccaaaatcgcaacatcgtgaaagttaaggggcaaaaa 6637079  T
Q  118 c 118  Q
    |    
T  6637078 c 6637078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 8965634 - 8965534
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||| |||||||||  | |||||||||||||| ||| |||||||||||||||||  || ||||| |||||| ||||||||| ||||| ||||||||||||    
T  8965634 ggggaccaaaactggcacagttgcaaaacttaaggggcggttttgtagtttttttttagggggctaaaatcacaacttcgtaaaagtaagggggcgaaaa 8965535  T
Q  118 c 118  Q
    |    
T  8965534 c 8965534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 34771378 - 34771266
Alignment:
Q  24 caaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgtta 123  Q
    ||||||||||| |||||||||||||||| ||| |||||||| ||||||| ||  ||   ||||| | ||||| ||||||||||| |||||||||| ||||    
T  34771378 caaaactgctacagttgcaaaacttaggagacagttttgtaattttttcttagaggattaaaattgtaactttgtgaaagttagagggcgaaaactgtta 34771279  T
Q  124 ttaaacctaaaaa 136  Q
    |||| ||||||||    
T  34771278 ttaagcctaaaaa 34771266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 53312486 - 53312596
Alignment:
Q  17 ggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    |||||||||||||||||| |||| || | ||||| || | ||||||||||||||| | ||  ||| |||||||||||||||||||||||||||||| |||    
T  53312486 ggggggccaaaactgctacagttacagagcttagagg-cagttttgtagtttttttcttagtgggtcaaaatcgcaacttcgtgaaagttagggggtgaa 53312584  T
Q  116 aaccgttattaa 127  Q
    ||| ||||||||    
T  53312585 aactgttattaa 53312596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 10059800 - 10059681
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt---ttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||||||||||   ||||| || ||||||||||||  || |||  |||| ||| ||||    
T  10059800 ttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgtagtttttttttcttagggggccaaaatcataatttcaagaaaattaagggg 10059701  T
Q  112 cgaaaaccgttattaaacct 131  Q
    |||||||   ||||||||||    
T  10059700 cgaaaactactattaaacct 10059681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 2181325 - 2181417
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttaggg 109  Q
    |||||||||||||| || ||||||||||||||| || | ||||||||||| ||||| || || ||||||||||||||||| | ||||||||||    
T  2181325 gggggccaaaactgttacagttgcaaaacttagagggcagttttgtagttcttttcttaaggagccaaaatcgcaacttcataaaagttaggg 2181417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 50769476 - 50769363
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||| |||||||| |||| ||||||||||||||| |||||||||||||||||   | || |||| |||||||||||||| | |||||||||||||  ||    
T  50769476 ggggctaaaactgccatagatgcaaaacttagggg-cggttttgtagtttttttttcttaggggggcaaaatcgcaactttgggaaagttagggggataa 50769378  T
Q  116 aaccgttattaaacc 130  Q
    ||| | |||||||||    
T  50769377 aactgctattaaacc 50769363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 2016988 - 2017108
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||||||||||||| || |||||||||||||| || | ||||||||||||||||   | |||| |||||||||||||||||   |||||||| ||||| |    
T  2016988 gggggccaaaactgttacagttgcaaaacttatgg-atggttttgtagtttttttttcttatgaggccaaaatcgcaactttaggaaagttatggggcta 2017086  T
Q  115 aaaccgttattaaacctaaaaa 136  Q
    |||| | |||||| ||||||||    
T  2017087 aaactgctattaagcctaaaaa 2017108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 11824398 - 11824514
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt----catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||| ||| |||||||||||||||||| ||  |||||||||||||    | |   | ||||||||||||||||||| |||||||||||||| |    
T  11824398 gggccaaaactactacagttgcaaaacttagggggcgaatttgtagttttttttttctttgagagccaaaatcgcaacttcgtaaaagttagggggcgga 11824497  T
Q  116 aaccgttattaaaccta 132  Q
    ||| |||||||| ||||    
T  11824498 aactgttattaagccta 11824514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 21957668 - 21957778
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatat--ggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    |||| ||||||||||| |||||||||||||||| | |||||||||||||||||  | |  | ||||||||||||||||| |  ||||||||||||| |||    
T  21957668 ggggtcaaaactgctacagttgcaaaacttaggaggcggttttgtagtttttttttcttagaggccaaaatcgcaactttggaaaagttagggggctaaa 21957767  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  21957768 actgctattaa 21957778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 43074672 - 43074629
Alignment:
Q  74 tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43074672 tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 43074629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 4411484 - 4411541
Alignment:
Q  74 tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacct 131  Q
    |||||| | |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  4411484 tatgggactaaaatcgcaacttcgtgaaaattagggggcgaaaactgttattaaacct 4411541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 42526171 - 42526259
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaa 128  Q
    ||||||||||| |||||||||||||||||||||  |||||||| |||||||||||||   |||||||||||||  ||||| | |||||||    
T  42526171 tgcaaaacttatgggacggttttgtagtttttt-ttatggggcaaaaatcgcaactttaagaaagttagggggttaaaactgctattaaa 42526259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 44356598 - 44356691
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgt-agttttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||||||| | |  ||||||||||||||| ||||||||| | ||||||| || | ||||||||||||||||| | ||||||||||||    
T  44356598 gggggccaaaactgccacatatgcaaaacttagggggcggttttgtaatttttttcttaggcggccaaaatcgcaactttgagaaagttagggg 44356691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 21597518 - 21597462
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  21597518 ttggggtgccaaaactgctacagttgcaaaacttaggggacggttttatagtatttt 21597462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 31553347 - 31553250
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||| ||||| ||| | ||||||||||||||||||| | |||| |||||||||  |||| || ||||||||||||||||||||| ||| ||||| |||||    
T  31553347 ggggtcaaaattgccacagttgcaaaacttaggggatgattttatagtttttt--tatgaggtcaaaatcgcaacttcgtgaaaattaaggggcaaaaac 31553250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 37831683 - 37831592
Alignment:
Q  41 caaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacc 130  Q
    ||||||||||||| ||||||||||   ||||||| || |||||||||||||||||||| | ||| ||||||||| ||||| | |||||||||    
T  37831683 caaaacttagggggcggttttgtaagtttttttcttagggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaaacc 37831592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 6207293 - 6207179
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    |||||| ||||||||||||| ||||| |||||||| ||| | |||||||||||  ||||| || | | |||||||| ||||||||  |||||||||| ||    
T  6207293 ttggggagccaaaactgctacagttgtaaaacttatggggcagttttgtagttttttttcttaggagtccaaaatcacaacttcgctaaagttagggagc 6207194  T
Q  113 gaaaaccgttattaa 127  Q
    |||||| | ||||||    
T  6207193 gaaaactgctattaa 6207179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 20112342 - 20112460
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagt-tttttcatatggggccaaaatcgcaacttcgtgaaagttag 107  Q
    |||||||||||| ||||||||||| | |  |||||||||| |||| |||||||||||| |||||| |  ||||||||||||||||||| |  ||||||||    
T  20112342 ttggctttgggg-gccaaaactgccacatatgcaaaactttgggggcggttttgtagtatttttctttgggggccaaaatcgcaactttggaaaagttag 20112440  T
Q  108 ggggcgaaaaccgttattaa 127  Q
      ||| ||||| ||||||||    
T  20112441 aaggctaaaactgttattaa 20112460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 21871587 - 21871685
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||| | | || ||||||||||||| | |||||||||||||||||  || |||| |||||||||||||| |  ||||||||||||| ||||    
T  21871587 gggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagtttttt-ttagggggtcaaaatcgcaactttgaaaaagttagggggctaaaa 21871685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 21927448 - 21927546
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||| | | || ||||||||||||| | |||||||||||||||||  || |||| |||||||||||||| |  ||||||||||||| ||||    
T  21927448 gggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagtttttt-ttagggggtcaaaatcgcaactttgaaaaagttagggggctaaaa 21927546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 23759777 - 23759868
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||||||||  | || | ||||||||||||||||||||||||| ||||||| || ||| |||||||||||||||  ||||||||| ||||    
T  23759777 ggccaaaactgtcacagatacaaaacttaggggacggttttgtagtttttttcttaggggaccaaaatcgcaactttatgaaagttaagggg 23759868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 51362739 - 51362858
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt----catatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||| |||||||||||| ||||||||||||||| ||  ||||||||||||||||    | || |||  ||||||| |||||| || ||||||||||| ||    
T  51362739 ggggaccaaaactgctacagttgcaaaacttagaggt-ggttttgtagttttttttttcttaagggatcaaaatcacaactttgtaaaagttaggggacg 51362837  T
Q  114 aaaaccgttattaaacctaaa 134  Q
    ||||| | |||||||||||||    
T  51362838 aaaactgctattaaacctaaa 51362858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 54855494 - 54855561
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||| ||||| |||||||||||||||| ||| |||| ||||||||||||  |||||||||||||||||    
T  54855494 aaaaattggccttggggggccaaaacttctaaagttacaaaacttagggagcggttttgtagtttttt 54855561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 21957624 - 21957542
Alignment:
Q  45 acttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    ||||||||| |||||||||||||||||  || |||| |||||||||||||| | ||||||||||| || ||||| | ||||||    
T  21957624 acttagggggcggttttgtagtttttttttagggggtcaaaatcgcaactttgagaaagttagggagctaaaactgatattaa 21957542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 51233677 - 51233752
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaactt 95  Q
    ||||||||||||||||| |||||| ||| ||| ||| || ||||||||||||||  | ||||||||||||||||||||    
T  51233677 gggggccaaaactgctacagttgccaaaattaaggggcgattttgtagtttttt--tttggggccaaaatcgcaactt 51233752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 51362653 - 51362535
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttt-----ttcatatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    ||||||||||||||| | |  ||||||||||||||| |||||||||||||||     ||| || |||||||||||||||||||    |||||||||||||    
T  51362653 gggggccaaaactgccacatatgcaaaacttagggggcggttttgtagttttttttcttcttagggggccaaaatcgcaactttagaaaagttagggggc 51362554  T
Q  113 gaaaaccgttattaaacct 131  Q
     |||||   ||||||||||    
T  51362553 taaaactactattaaacct 51362535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 133
Target Start/End: Complemental strand, 2836992 - 2836896
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaa 133  Q
    ||||||||||||||| |||||||||||||||||  | |  ||||||||||||||| ||| |  ||||||||||||  ||||| |||||||| |||||    
T  2836992 tgcaaaacttagggggcggttttgtagttttttttctttgggggccaaaatcgcagctttggaaaagttagggggttaaaactgttattaagcctaa 2836896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 14449484 - 14449587
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||||||||||| | |  ||||||||||||||  |||||||||||||||||   | || | ||||||||||||||||| |  ||||||||||||| |    
T  14449484 gggggccaaaactgccacaaatgcaaaacttagggagcggttttgtagttttttttccttaagaggccaaaatcgcaactttggaaaagttagggggcta 14449583  T
Q  115 aaac 118  Q
    ||||    
T  14449584 aaac 14449587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 20737434 - 20737526
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagg 108  Q
    |||||||||||||||||||||||||||| ||||||| || |||| |||  ||||||| || ||   |||||||||||||| | ||||||||||    
T  20737434 gggggccaaaactgctatagttgcaaaatttagggggcgattttatagctttttttcttagggaatcaaaatcgcaactttgagaaagttagg 20737526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 42526081 - 42526000
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaactt 95  Q
    |||||||||||||||| ||| |||||||||||| | ||| ||||||||||||| ||||  || ||||||||||| |||||||    
T  42526081 ttggggggccaaaactactacagttgcaaaactaatggggcggttttgtagttttttttttaaggggccaaaattgcaactt 42526000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 53312401 - 53312282
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttt---tttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||||||||||| | |  ||||||| |||||||  |||||||||||||   |||| || ||||||||||||||||||| |  ||||||||||||| |    
T  53312401 gggggccaaaactgccacatgtgcaaaatttagggggtggttttgtagtttgtttttcttagggggccaaaatcgcaactttgaaaaagttagggggcta 53312302  T
Q  115 aaaccgttattaaacctaaa 134  Q
    |||  | |||||| ||||||    
T  53312301 aaaatgctattaagcctaaa 53312282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 12719544 - 12719445
Alignment:
Q  36 agttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaaa 135  Q
    |||||||||||||||||| |  ||||||||||||||  || ||||||||||||| || ||  ||||| ||| ||||||||||| | |||||||||| |||    
T  12719544 agttgcaaaacttagggggcaattttgtagttttttt-tagggggccaaaatcgtaaatttatgaaaattaaggggcgaaaactgctattaaaccttaaa 12719446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 14060903 - 14060982
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaactt 95  Q
    ||||||||||||||| | || || |||||||||||||| |||||||||  ||||||| || || ||||||||||||||||    
T  14060903 gggggccaaaactgccacagatgtaaaacttaggggacagttttgtagttttttttcttagggagccaaaatcgcaactt 14060982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 29697631 - 29697559
Alignment:
Q  23 ccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaactt 95  Q
    |||||||||| | || ||||||||||||||| |||||||||| ||||||  | || |||||||||||||||||    
T  29697631 ccaaaactgccacagatgcaaaacttagggggcggttttgtaatttttttgtttgaggccaaaatcgcaactt 29697559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 2016905 - 2016803
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||| | |  ||||||||||||||| | |||||||||  ||||||| |   |||||||||||||||||| |  ||||||||||||| ||    
T  2016905 gggggccaaaactgccacatgtgcaaaacttagggggcagttttgtagtcttttttctttgagggccaaaatcgcaactttggaaaagttagggggctaa 2016806  T
Q  116 aac 118  Q
    |||    
T  2016805 aac 2016803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 4796149 - 4796056
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||||||||| |||||||||||||| |||  ||||||||||  ||||||| ||  ||||||||||||||| || |  |||||||||||    
T  4796149 gggggccaaaactgctacagttgcaaaacttatggg-tggttttgtagttttttttcttagagggccaaaatcgcaattttgaaaaagttagggg 4796056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 10059899 - 10059950
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||| | || ||||||||||||||| |||||||||||||||||    
T  10059899 gggccaaaactgccacagatgcaaaacttagggggcggttttgtagtttttt 10059950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 12719648 - 12719741
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||||||||| | || |||||||||||||||  ||||||||||   ||||||| || |||||||||||  |||||| | |||||||||||||    
T  12719648 ggccaaaactgccacagatgcaaaacttagggggtggttttgtagtttttttttcttagggggccaaaatatcaactttgggaaagttaggggg 12719741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 21322835 - 21322701
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| ||||| ||||||||||| || |||||||||||||| ||  | |||||||||||  ||||| ||  |    |||||||||||||| ||||    
T  21322835 aaaaattggccttgggaggccaaaactgttaaagttgcaaaacttaaggagcagttttgtagttttttttcttagagaaaaaaaatcgcaacttcatgaa 21322736  T
Q  102 agttagggggcgaaaaccgttattaaacctaaaaa 136  Q
    |||||| |||||||||  | ||||||| |||||||    
T  21322735 agttagagggcgaaaattgctattaaatctaaaaa 21322701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 21871507 - 21871445
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt 67  Q
    |||| |||| ||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  21871507 aaaaattggttttggagggccaaaactgctacagttgcaaaactta-gggacagttttgtagtt 21871445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 21927368 - 21927306
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt 67  Q
    |||| |||| ||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  21927368 aaaaattggttttggagggccaaaactgctacagttgcaaaactta-gggacagttttgtagtt 21927306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 1420765 - 1420862
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagt--tttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaa 134  Q
    ||||||||||| ||| ||||||||||||  |||||| || ||| ||||||||| ||||| | |||||||| ||||| ||||| | |||||| ||||||    
T  1420765 tgcaaaacttatggggcggttttgtagttctttttcttaggggaccaaaatcgtaactttgggaaagttaaggggctaaaactgctattaagcctaaa 1420862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 8070844 - 8070926
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||||||||| | |||||||||||| ||||| ||||| || ||||||  || |||| ||||||| ||||||||||||    
T  8070844 ggggtcaaaactgctacaattgcaaaacttatgggacagttttataatttttttttagggggtcaaaatcacaacttcgtgaa 8070926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 4796240 - 4796357
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||||| | || |||||||||||  || ||||||| || ||||||  | |||||||||||| |||| || |   |||||||||||| ||||    
T  4796240 gggggccaaaactgccacaggtgcaaaacttaaagggcggttttataatttttttctttggggccaaaattgcaattttggataagttagggggctaaaa 4796339  T
Q  118 ccgttattaaacctaaaa 135  Q
    | | |||||| |||||||    
T  4796340 ctgctattaagcctaaaa 4796357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 14016784 - 14016723
Alignment:
Q  66 ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    ||||||| || | ||||||||||||||||| | |||||||||||||| ||||||| ||||||    
T  14016784 ttttttcttaggaggccaaaatcgcaactttgggaaagttagggggctaaaaccgctattaa 14016723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 16292382 - 16292305
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaactt 95  Q
    ||||||||||||||| | |  |||||||||||| || || ||||||||||||||  || ||| |||||||||||||||    
T  16292382 gggggccaaaactgccacatgtgcaaaacttagagggcgattttgtagtttttttttaagggaccaaaatcgcaactt 16292305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 21597602 - 21597655
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| | |  ||||||| |||||||||||||||||||||||||    
T  21597602 gggggccaaaactgccacatatgcaaaatttaggggacggttttgtagtttttt 21597655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 43074716 - 43074671
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaactta 49  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||    
T  43074716 aaaaattggcattggggggccaaaactgctacagttgcaaaactta 43074671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 54983957 - 54983851
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||| |||||||||| | |||||||||||||||| || |||| || ||||||  || ||||||||| ||||| |||||| ||||||||||| ||||||    
T  54983957 gggggctaaaactgctacaattgcaaaacttagggggcg-ttttataattttttt-tagggggccaaa-tcgcatcttcgtaaaagttaggggacgaaaa 54983861  T
Q  118 ccgttattaa 127  Q
    | | ||||||    
T  54983860 ctgctattaa 54983851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 49185656 - 49185590
Alignment:
Q  46 cttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||||| |||||||||||||||||  | || ||||||||||||||||||| | |||||||||||||    
T  49185656 cttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactt-gggaaagttaggggg 49185590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 52462988 - 52463098
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||  |||| ||||||||||| ||| || ||||||||||||||  | ||  || ||||||||||||||| |  ||| ||||||||| ||    
T  52462988 gggggccaaaactgtcatagatgcaaaacttaaggggcg-ttttgtagttttttttcttagaggcccaaaatcgcaactttgaaaaaattagggggctaa 52463086  T
Q  116 aaccgttattaa 127  Q
    ||| ||||||||    
T  52463087 aactgttattaa 52463098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 25909580 - 25909506
Alignment:
Q  39 tgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    ||||||||||||||| ||||||| |||  ||||||| || |||||||||||| |||||| |  ||||||||||||    
T  25909580 tgcaaaacttagggggcggttttatagttttttttcttagggggccaaaatcacaactttggaaaagttaggggg 25909506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 35615407 - 35615317
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagttttttc--atatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    ||||||||||||| | | ||||||||||||||||   || |||||||||||||||||||    ||||||||||||| ||||| | ||||||    
T  35615407 tgcaaaacttaggaggcagttttgtagttttttcctttagggggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaa 35615317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 274
Target Start/End: Complemental strand, 314512 - 314438
Alignment:
Q  200 ggatcgtacattgagtttgatcatcacattaaactaagggaaatcatacaagtgagattaatatcagatcttcac 274  Q
    ||||| |||| ||||||| |||| || |||| |||||| || ||||||||||||||||| |||||| || |||||    
T  314512 ggatcttacactgagttttatcaccatattagactaagagatatcatacaagtgagattgatatcacatattcac 314438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 8965716 - 8965790
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaactt 95  Q
    |||| |||||||||| | || ||||||||||||||| ||||||| |||||||| | ||  ||||||||||||||||||    
T  8965716 ggggaccaaaactgccacagatgcaaaacttagggggcggttttatagttttt-ctta--gggccaaaatcgcaactt 8965790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 6207374 - 6207427
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||| ||| | |  ||||||||||||||| |||||||||||||||||    
T  6207374 gggggccaaaattgccacaaatgcaaaacttagggggcggttttgtagtttttt 6207427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 19909255 - 19909192
Alignment:
Q  49 aggggacggttttgtagttttt--tcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    ||||| ||||||||||||||||  || || ||||||||||||||||||| | |||||||||||||    
T  19909255 aggggtcggttttgtagtttttcttctta-ggggccaaaatcgcaactttgagaaagttaggggg 19909192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 21871444 - 21871407
Alignment:
Q  89 gcaacttcgtgaaagttagggggcgaaaaccgttatta 126  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  21871444 gcaacttcgtgaaagttaggaggcgaaaaccgctatta 21871407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 21927305 - 21927268
Alignment:
Q  89 gcaacttcgtgaaagttagggggcgaaaaccgttatta 126  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  21927305 gcaacttcgtgaaagttaggaggcgaaaaccgctatta 21927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 35615433 - 35615462
Alignment:
Q  81 ccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||||||||||||||||||||||    
T  35615433 ccaaaatcgcaacttcgtgaaagttagggg 35615462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 11983592 - 11983643
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||| |||   |||||||||||||||| |||||||||||||||||    
T  11983592 ggggccaaaacttctacgattgcaaaacttagggg-cggttttgtagtttttt 11983643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 21451569 - 21451453
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttt-tcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    |||||||||||| | |  ||||||| ||||| |||| ||||||||||||| ||  | || || ||||||||||||| | |||||||||| ||| |||||     
T  21451569 ggccaaaactgccacaagtgcaaaatttaggagacgtttttgtagtttttatctcagggagcaaaaatcgcaactttgagaaagttaggaggctaaaact 21451470  T
Q  120 gttattaaacctaaaaa 136  Q
    | |||||| ||| ||||    
T  21451469 gctattaagccttaaaa 21451453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 41467217 - 41467126
Alignment:
Q  40 gcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaaccta 132  Q
    |||||||||| ||| |||||||||||||||||  ||||||  |||||||| |||||  | ||| |||||| || ||||| | |||||||||||    
T  41467217 gcaaaacttaaggggcggttttgtagtttttt-ttatgggatcaaaatcgtaactttttaaaacttagggtgctaaaactgctattaaaccta 41467126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 20185114 - 20185217
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||||||||||||||||||| |||||||||||||||| | |||||||||||||||||  || |||| |||||||||||||||||||||||||||||||||    
T  20185114 ttggggggccaaaactgctacagttgcaaaacttaggaggcggttttgtagtttttttttagggggtcaaaatcgcaacttcgtgaaagttagggggcga 20185213  T
Q  115 aaac 118  Q
    ||||    
T  20185214 aaac 20185217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 4049908 - 4050032
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaa 102  Q
    |||| ||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||| ||||||| || |||||||||||| |||||||||||||    
T  4049908 aaaaattggccttggggggccaaaactgctacagttgcaaaccttagggggcggttttgtagtttttttcttagggggccaaaatcacaacttcgtgaaa 4050007  T
Q  103 gttagggggcgaaaaccgttattaa 127  Q
    |||| ||||||||||| | ||||||    
T  4050008 gttaaggggcgaaaactgctattaa 4050032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 8074065 - 8074186
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtgaaagtt 105  Q
    ||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||   ||||||| |||||||| ||||||| |||||||||||||||    
T  8074065 ttggcgttggagggccaaaactgctacagttgcaaaactttggggacggttttgtagtttttttttcttatggggctaaaatcgtaacttcgtgaaagtt 8074164  T
Q  106 agggggcgaaaaccgttattaa 127  Q
    ||||||||||||| | ||||||    
T  8074165 agggggcgaaaactgctattaa 8074186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 36580384 - 36580277
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||| |||||||| ||||||||||||||||||||| |||||||     
T  36580384 ggccaaaactgctacagttgcaaaacttaggggacggttttgtagtttttttcttaggggaccaaaatcacaacttcgtgaaagttaggggccgaaaact 36580285  T
Q  120 gttattaa 127  Q
    | ||||||    
T  36580284 gctattaa 36580277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 17876349 - 17876468
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgt-agttttttcatatggggccaaaatcgcaacttcgtgaaagttag 107  Q
    |||| ||| ||||||||||||||||| ||||||||||||||  |||||||||||| | ||||||| || ||||||||||||| |||||||||||||||||    
T  17876349 ttggtttttgggggccaaaactgctacagttgcaaaacttaatggacggttttgtaatttttttcttaaggggccaaaatcgtaacttcgtgaaagttag 17876448  T
Q  108 ggggcgaaaaccgttattaa 127  Q
    |||| |||||| | ||||||    
T  17876449 ggggtgaaaactgctattaa 17876468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 18186550 - 18186436
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||  | ||   |||||||||||||||||| | |||||||||||||||||||    
T  18186550 ggccaaaactgctatagttgcaaaacttaggaggcggttttgtagttttttttcttaaaaggccaaaatcgcaacttcataaaagttagggggcgaaaac 18186451  T
Q  119 cgttattaaacctaa 133  Q
    |  ||||||||||||    
T  18186450 cactattaaacctaa 18186436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 18504427 - 18504550
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaag 103  Q
    |||| ||||| ||||| |||||||||||||| | |||||||||||| ||||||||||| |||||||||  || |||  ||||||||||||||| ||||||    
T  18504427 aaaaattggcattgggaggccaaaactgctacaattgcaaaacttaagggacggttttttagtttttttttaggggatcaaaatcgcaacttcatgaaag 18504526  T
Q  104 ttagggggcgaaaaccgttattaa 127  Q
    ||||||| ||||||| ||||||||    
T  18504527 ttaggggacgaaaactgttattaa 18504550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 3247377 - 3247482
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccg 120  Q
    |||||||||||||| |||||||||| ||||| | |||||||||||||||||  ||||||||||||||| ||||||||||||||||||||| ||||||  |    
T  3247377 ggccaaaactgctacagttgcaaaatttaggaggcggttttgtagttttttt-tatggggccaaaatcacaacttcgtgaaagttaggggacgaaaattg 3247475  T
Q  121 ttattaa 127  Q
    |||||||    
T  3247476 ttattaa 3247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 5172710 - 5172836
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtga 100  Q
    |||| ||||| ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||   | || |||| ||||||||||||||||| |    
T  5172710 aaaaattggccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgtagttttttttccttagggggtcaaaatcgcaacttcgtaa 5172809  T
Q  101 aagttagggggcgaaaaccgttattaa 127  Q
    ||||||||| | |||||| ||| ||||    
T  5172810 aagttagggagtgaaaacagttgttaa 5172836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 28350230 - 28350119
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||| | ||  |||||||||||||| |||||||||||||||||  | || ||||||||||||| |||||||||||||||||||||| ||    
T  28350230 gggggccaaaactgccacaggggcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgtaacttcgtgaaagttagggggctaa 28350131  T
Q  116 aaccgttattaa 127  Q
    ||| | ||||||    
T  28350130 aactgctattaa 28350119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 35250317 - 35250431
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||||||||||||||||||| |||||||||||||||||| | |||||| ||||||||  || |||| |||||||||||||| || ||||||| ||||| |    
T  35250317 ttggggggccaaaactgctacagttgcaaaacttagggggcagttttgcagtttttt-ttagggggtcaaaatcgcaactttgtcaaagtta-ggggcaa 35250414  T
Q  115 aaaccgttattaaacct 131  Q
    |||||| ||||||||||    
T  35250415 aaaccgctattaaacct 35250431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 28785869 - 28785768
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||| | | |||||||||||||||||| |||||||||||||||||   | || ||||||||||||| ||||||||||||||||||||||| ||    
T  28785869 gggccaaaactacaacagttgcaaaacttagggggcggttttgtagtttttttttcctagggggccaaaatcgtaacttcgtgaaagttagggggcggaa 28785770  T
Q  117 ac 118  Q
    ||    
T  28785769 ac 28785768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 14247407 - 14247297
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||||| | | |||||||||||| ||| ||||||||||||||||| | || | |||||||||| ||||||||||||||||||| |||||||    
T  14247407 gggggccaaaactgccacaattgcaaaacttatggggcggttttgtagtttttttcttaggcggccaaaatcacaacttcgtgaaagttaggtggcgaaa 14247308  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  14247307 actgctattaa 14247297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 19644990 - 19645119
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaag 103  Q
    |||| |||||||||| || |||||||||||| ||||||||||||||| || |  ||| ||| ||||||  |  |||||||||||||||||||||||||||    
T  19644990 aaaaattggctttggagg-ccaaaactgctacagttgcaaaacttagagggcaatttggtaatttttttcttaggggccaaaatcgcaacttcgtgaaag 19645088  T
Q  104 ttagggggcgaaaaccgttattaaacctaaa 134  Q
    ||| ||||||||||  | |||||||||||||    
T  19645089 ttaaggggcgaaaattgctattaaacctaaa 19645119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 24433063 - 24432978
Alignment:
Q  26 aaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||| ||| |||| ||||||||||| ||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  24433063 aaactactacagttacaaaacttaggagacggttttgtagcttttttcttagggggccaaaatcgcaacttcgtgaaagttagggg 24432978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 28350345 - 28350436
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    |||||||||||||| | || ||||||||||||||| ||||||||||||||||| | || ||||||||| ||||||||||||||||||||||||    
T  28350345 ggggccaaaactgccacaggtgcaaaacttagggg-cggttttgtagtttttttcttagggggccaaagtcgcaacttcgtgaaagttagggg 28350436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 15348157 - 15348253
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||||||||||   | ||  ||  ||||||||||||||||||||||||||||||    
T  15348157 gggggccaaaactgctacggttgcaaaacttagggggcggttttgtagtttttttttcttagaggatcaaaatcgcaacttcgtgaaagttaggggg 15348253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 20505227 - 20505329
Alignment:
Q  34 atagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaa 133  Q
    ||||||||| |||||||||| |||||||||||||||||  || |||||||||||||||||||| | |||| ||||||| |||||| | |||||| || ||    
T  20505227 atagttgcacaacttagggggcggttttgtagtttttttttagggggccaaaatcgcaacttcataaaagctagggggtgaaaactgctattaagccaaa 20505326  T
Q  134 aaa 136  Q
    |||    
T  20505327 aaa 20505329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 23826224 - 23826339
Alignment:
Q  23 ccaaaactgctatagttgcaaaacttaggggacggtttt-gtagtttttt----catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||||||||| ||||||||||||||| ||||| |||| ||||||||||    | || |||||||||||||||||||||||||||||||||| | ||||    
T  23826224 ccaaaactgctacagttgcaaaacttagaggacgatttttgtagttttttttttcttaaggggccaaaatcgcaacttcgtgaaagttaggggacaaaaa 23826323  T
Q  118 ccgttattaaacctaa 133  Q
    | | |||||| |||||    
T  23826324 ctgctattaagcctaa 23826339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 6792017 - 6792116
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaaaa 136  Q
    ||||||||||||||| |||||||||||||||||  | || ||| ||||||||||||||| |  ||||||||||||| ||||| | |||||||||||||||    
T  6792017 tgcaaaacttagggggcggttttgtagttttttttcttaggggaccaaaatcgcaactttggaaaagttagggggctaaaactgctattaaacctaaaaa 6792116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 23746093 - 23746207
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagtttt-------ttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||       ||| || ||||| |||||||||||||||| ||||||||||| |||    
T  23746093 gccaaaactgctacagttgcaaaacttagaggacggttttgtagttttttttttcttcttaaggggctaaaatcgcaacttcgtaaaagttaggggacga 23746192  T
Q  115 aaaccgttattaaac 129  Q
    || | | ||||||||    
T  23746193 aagctgctattaaac 23746207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 21505743 - 21505629
Alignment:
Q  4 aaaagttggctttggggggccaaaac-tgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtga 100  Q
    |||| ||||| ||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||  | ||  ||||| |||| ||||||||||||    
T  21505743 aaaaattggccttggggggccaaaaaatgctatagttacaaaacttagggg-cggttttgtagttttttttcttaaagggcccaaattgcaacttcgtga 21505645  T
Q  101 aagttagggggcgaaa 116  Q
    |||||| ||| |||||    
T  21505644 aagttaagggacgaaa 21505629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 28472576 - 28472631
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  28472576 ttggggggccaaaactgctacagttgcaaaacttagggg-cggttttgtagtttttt 28472631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 40872294 - 40872200
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttc 96  Q
    |||| ||||| |||| ||||| ||||||||| |||| ||||||||| |||||||||||||||||  ||||| || |||| |||||||||||||||    
T  40872294 aaaaattggcattggagggcctaaactgctacagttacaaaacttatgggacggttttgtagttttttttcttagggggtcaaaatcgcaacttc 40872200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 47909803 - 47909697
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccg 120  Q
    ||||||| ||| | || ||||||||||||||| || |||||||||||||| | || ||||| ||||||||||||| | |||||||||||||| ||||| |    
T  47909803 gccaaaattgccacagatgcaaaacttagggggcgattttgtagtttttttcttagggggctaaaatcgcaactttgggaaagttagggggctaaaactg 47909704  T
Q  121 ttattaa 127  Q
     ||||||    
T  47909703 ctattaa 47909697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 3382025 - 3382122
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    ||||||||||||| |||||||||||||||| | |   ||||||||||||| | || ||| |||||||| ||||||||| ||||||||||||| |||||    
T  3382025 gccaaaactgctacagttgcaaaacttaggaggcaaatttgtagtttttttcttaagggaccaaaatcacaacttcgtaaaagttagggggcaaaaac 3382122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 15107106 - 15107053
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  15107106 gggggccaaaactgctatagttgcaaaacttaagggacaattttgtagtttttt 15107053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 41243845 - 41243955
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||| ||| ||||||||||||||| || || ||||||||   ||||||| || || |||||||||| ||||| |||||||||||||  |||||    
T  41243845 gggccaaaactactacagttgcaaaacttagtgggcgattttgtagtttttttttcttagggtgccaaaatcgtaactttgtgaaagttagggaccgaaa 41243944  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  41243945 actgctattaa 41243955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 45697599 - 45697485
Alignment:
Q  25 aaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-------catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||||||| |||||||||| ||| ||| |  ||||||||||||||       | || ||||||||||||||||||||| |||||||||||| ||||||    
T  45697599 aaaactgctacagttgcaaaatttatggggcaattttgtagtttttttcttcttcttagggggccaaaatcgcaacttcgagaaagttaggggacgaaaa 45697500  T
Q  118 ccgttattaaaccta 132  Q
    | |||||||| ||||    
T  45697499 ctgttattaagccta 45697485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 9500124 - 9500213
Alignment:
Q  41 caaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    ||||||||||||| |||||||||||||||||   | || ||| |||||||||||||||| ||||| ||||||||| ||||| | ||||||    
T  9500124 caaaacttagggggcggttttgtagtttttttttcttaggggaccaaaatcgcaacttcttgaaacttagggggctaaaactgctattaa 9500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 11373973 - 11373850
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| ||||| |||||||  ||||| ||||||||||| ||| |  |||||||||||||||||  | |  |||| ||| ||||||||||||| ||    
T  11373973 aaaaattggccttgggaggccaaa--tgctacagttgcaaaacatagagagcggttttgtagttttttttccttaggggtcaagatcgcaacttcgtaaa 11373876  T
Q  102 agttagggggcgaaaaccgttattaa 127  Q
    ||||||||||||||||| | ||||||    
T  11373875 agttagggggcgaaaactgctattaa 11373850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 11374077 - 11374010
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||| |||||||||| ||||||||||||||| |||||||||||||||||    |||||||||||||||    
T  11374077 aaaaattggctttggagggccaaaactgctaaagttgcaaaacttagggtgtagttttgtagtttttt 11374010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 48058974 - 48058880
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||||||||||| | ||  ||||||||||||||||| ||||||||||  ||||| || |||||||||||| ||||||  ||||| ||||||||    
T  48058974 ggggccaaaactgccacagaggcaaaacttaggggacgattttgtagttttttttcttaaggggccaaaatctcaacttgttgaaacttaggggg 48058880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 6726370 - 6726261
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||||||| |||| |||||| ||| ||  | |||| ||||||||| | ||  ||| |||||||||||||||||||||| || |||||||||    
T  6726370 gggggccaaaactgctacagtttcaaaacatagagggggcttttatagtttttttcttagagggtcaaaatcgcaacttcgtgaaaggta-ggggcgaaa 6726272  T
Q  117 accgttattaa 127  Q
    || ||||||||    
T  6726271 actgttattaa 6726261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 3381975 - 3381898
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaactt 95  Q
    |||||||||||||| | |  ||||||||||||||| ||||||||||||| ||||| |||||| | |||||||||||||    
T  3381975 ggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtttttttcttatgggactaaaatcgcaactt 3381898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 15348064 - 15347957
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||||| |||| | | || |||||||||||||||  ||||||||||||||||| || |||| ||||||||||||||   |||||||||||||| ||||    
T  15348064 gggggccataacttccacagatgcaaaacttaggggt-ggttttgtagttttttctta-ggggtcaaaatcgcaactttaggaaagttagggggctaaaa 15347967  T
Q  118 ccgttattaa 127  Q
    | | ||||||    
T  15347966 cggctattaa 15347957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 18186651 - 18186770
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||| |||||||||| | || ||||||||||| ||||||||||| |||   ||||||| || |||| |||||||| ||||| |  ||||||||||||| |    
T  18186651 ggggaccaaaactgccacagatgcaaaacttaagggacggttttatagtttttttttcttagggggtcaaaatcgtaactttggaaaagttagggggcta 18186750  T
Q  115 aaaccgttattaaacctaaa 134  Q
    |||| | |||||||| ||||    
T  18186751 aaactgctattaaacttaaa 18186770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 15029250 - 15029306
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag 65  Q
    ||||| ||| |||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  15029250 ttggccttgaggggtcaaaactgctacagttggaaaacttaggggacggttttgtag 15029306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 45718086 - 45718189
Alignment:
Q  33 tatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacc 130  Q
    ||||||||||||||||||||| || ||||||||||||||  | ||   | ||||| |||||||||||||||||||||| ||| ||||  | |||||| ||    
T  45718086 tatagttgcaaaacttagggggcgattttgtagttttttttcttaattgaccaaattcgcaacttcgtgaaagttaggaggcaaaaattgctattaagcc 45718185  T
Q  131 taaa 134  Q
    ||||    
T  45718186 taaa 45718189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 3318409 - 3318330
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    ||||||||||| |||||||||||||| ||||||  || ||| ||||||||||||||| |  ||||||| ||||| |||||    
T  3318409 tgcaaaacttaagggacggttttgtaatttttttttaggggaccaaaatcgcaactttggaaaagttaaggggctaaaac 3318330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 15029175 - 15029081
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttca--tatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||||||| | |  ||||||||||||||| |||||||||||||||||    || |||| |||||||||||||| |  |||||||||||    
T  15029175 gggggccaaaactgccacatgtgcaaaacttagggggcggttttgtagttttttttattagggggtcaaaatcgcaactttggaaaagttagggg 15029081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 21748082 - 21748125
Alignment:
Q  84 aaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    ||||||||||||||||||||||||||||||||||| | ||||||    
T  21748082 aaatcgcaacttcgtgaaagttagggggcgaaaactgctattaa 21748125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 44312857 - 44312748
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    |||| |||||||| || ||||||||||||||||   | |||||||||  ||||||  || |||| ||||||||||||||||| ||||||||| | |||||    
T  44312857 ggggtcaaaactgttacagttgcaaaacttaggaagctgttttgtagcattttttttta-ggggtcaaaatcgcaacttcgtaaaagttaggagacgaaa 44312759  T
Q  117 accgttattaa 127  Q
    || ||||||||    
T  44312758 actgttattaa 44312748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 10097669 - 10097616
Alignment:
Q  17 ggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||||||| | |||||||||||||||| || ||||||||||||||    
T  10097669 ggggggccaaaactgctacaattgcaaaacttagggg-cgattttgtagtttttt 10097616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 36903471 - 36903562
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||| |||||||||| |||||||||||||||||  | |||||||||||||||  |   |||||||||||||||| | |  ||||||||||||    
T  36903471 gggggctaaaactgctacagttgcaaaacttagggtgcagttttgtagtttttt--ttaagggccaaaatcgcaacattgaaaaagttaggggg 36903562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 41243735 - 41243642
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaaccta 132  Q
    ||||||||||||||| ||||||||||||||||| | || ||||| ||||| ||||||| |  ||||||||||||| ||||| | |||||| ||||    
T  41243735 tgcaaaacttagggg-cggttttgtagtttttttcttagggggctaaaattgcaactttggaaaagttagggggctaaaactgctattaagccta 41243642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 13889567 - 13889475
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagt--tttttcatatggggccaaaatcgcaacttcgtgaaagttagg 108  Q
    |||| |||||||||||  | |||||||||||||| | ||||||||||||  |||||  || ||| |||||||  |||||||||||||||||||    
T  13889567 ggggtccaaaactgctgcacttgcaaaacttaggaggcggttttgtagttgttttttttaggggaccaaaattacaacttcgtgaaagttagg 13889475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 14247509 - 14247595
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||| | |  |||||||||||| ||||||||||||||||||||  || |||| | |||||||||||| |  |||||||||||    
T  14247509 gccaaaactgccacatgtgcaaaacttagcggacggttttgtagtttttt--taaggggtcgaaatcgcaactttggaaaagttagggg 14247595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 20185031 - 20184912
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||||||||||  | |  ||||||||||| | | |||||||||||||||||   | || ||||| ||||||||||||| |  |||||||||| || |    
T  20185031 gggggccaaaactggcacatatgcaaaacttaagaggcggttttgtagtttttttttcttagggggctaaaatcgcaactttggaaaagttagggagcta 20184932  T
Q  115 aaaccgttattaaacctaaa 134  Q
    |||| |||||||| ||||||    
T  20184931 aaactgttattaagcctaaa 20184912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 21939335 - 21939392
Alignment:
Q  77 ggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaa 134  Q
    |||||||||||||||||||||||| | ||||||||| ||||| | |||||| ||||||    
T  21939335 ggggccaaaatcgcaacttcgtgatacttagggggccaaaactgctattaagcctaaa 21939392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 24679043 - 24679155
Alignment:
Q  17 ggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttt--tttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||||||||||||||| | | | |||| ||||||||| | |||||||| |||  |||  || |||||||||||||||| ||| |||||  |||||||| |    
T  24679043 ggggggccaaaactgcaaaaatggcaatacttagggggctgttttgtattttattttgttagggggccaaaatcgcaatttcttgaaacatagggggcca 24679142  T
Q  115 aaaccgttattaa 127  Q
    |||| ||||||||    
T  24679143 aaactgttattaa 24679155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 20505151 - 20505095
Alignment:
Q  77 ggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaa 133  Q
    ||||||||| ||||||||| | |||||||||||||| ||||| | ||||||||||||    
T  20505151 ggggccaaagtcgcaactttgagaaagttagggggctaaaactgctattaaacctaa 20505095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 40872368 - 40872400
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||||||||||||||||||||||    
T  40872368 tgcaaaacttaggggacggttttgtagtttttt 40872400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 15107195 - 15107305
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccg 120  Q
    |||||||||||| | |  ||||||||||||||  |||||||||||||||||  || ||||||||||||| ||||| |  ||| ||||||||  ||||| |    
T  15107195 ggccaaaactgccacaaatgcaaaacttagggagcggttttgtagtttttt-ttagggggccaaaatcgtaactttggaaaaattaggggggtaaaactg 15107293  T
Q  121 ttattaaaccta 132  Q
     |||||| ||||    
T  15107294 ctattaagccta 15107305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 21505821 - 21505911
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||| |||  |||||| | |||||| | |||||||||||||||  | || ||||||||||||||||||| |  |||||||||||    
T  21505821 gccaaaactgccatatatgcaaagcatagggggcagttttgtagttttttttcttagggggccaaaatcgcaactttgaaaaagttagggg 21505911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 4049817 - 4049702
Alignment:
Q  24 caaaactgctatagttgcaaa-acttaggggacggttttgtagtttttt----catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    ||||||||| | || |||||| |||||||| ||||||||||||||||||    | || |||||||||||||||||||    |||||||| |||| |||||    
T  4049817 caaaactgccacagatgcaaagacttagggaacggttttgtagttttttttttcttaaggggccaaaatcgcaactttagaaaagttagtgggctaaaac 4049718  T
Q  119 cgttattaaacctaaa 134  Q
     | | |||||||||||    
T  4049717 tgctgttaaacctaaa 4049702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 6677038 - 6677099
Alignment:
Q  211 tgagtttgatcatcacattaaactaagggaaatcatacaagtgagattaatatcagatcttca 273  Q
    |||||||||||| ||||||| |||||| |||| || ||||||||||||| ||||| |||||||    
T  6677038 tgagtttgatcaccacattacactaagagaaa-caaacaagtgagattagtatcacatcttca 6677099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 6726520 - 6726570
Alignment:
Q  77 ggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    |||||| ||||||||||||||||||||||||||| | ||||| | ||||||    
T  6726520 ggggcctaaatcgcaacttcgtgaaagttaggggacaaaaacagctattaa 6726570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 28472479 - 28472409
Alignment:
Q  40 gcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||  || || ||||||||||||||| || |||| |||||||||||||| |  |||||||||||    
T  28472479 gcaaaacttatagggcgattttgtagttttttcttagggggtcaaaatcgcaactttggaaaagttagggg 28472409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 46265955 - 46265865
Alignment:
Q  41 caaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacc 130  Q
    ||||||||||| | ||||||||||||| ||||| || |||||||||||| ||||||| | ||| ||| ||||  ||||| | |||||||||    
T  46265955 caaaacttaggaggcggttttgtagtttttttcttagggggccaaaatcccaacttcttaaaacttaaggggttaaaactgctattaaacc 46265865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 35250232 - 35250131
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    |||| |||||||||  | || |||||||||||| || ||||||| ||| ||||||| || ||| ||||||||||||||| |  |||||||| |||| |||    
T  35250232 ggggtccaaaactgtcaaagatgcaaaacttagagggcggttttatagtttttttcttaagggaccaaaatcgcaactttggaaaagttagagggctaaa 35250133  T
Q  117 ac 118  Q
    ||    
T  35250132 ac 35250131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 36580475 - 36580528
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| | |  ||||||||||||||| ||||||||||| |||||    
T  36580475 gggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagcttttt 36580528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 1377407 - 1377521
Alignment:
Q  17 ggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||||| || ||||||||||||||||| || |||||||||||||||  |  |||||||||||||||||||||||||||||||||| |||||    
T  1377407 ggggggccaaaactgttacagttgcaaaacttagggaacagttttgtagtttttttcttaggggccaaaatcgcaacttcgtgaaagttaggggacgaaa 1377506  T
Q  117 accgttattaaacct 131  Q
    || | ||||||||||    
T  1377507 actgatattaaacct 1377521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 1385155 - 1385269
Alignment:
Q  17 ggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||||| || ||||||||||||||||| || |||||||||||||||  |  |||||||||||||||||||||||||||||||||| |||||    
T  1385155 ggggggccaaaactgttacagttgcaaaacttagggaacagttttgtagtttttttcttaggggccaaaatcgcaacttcgtgaaagttaggggacgaaa 1385254  T
Q  117 accgttattaaacct 131  Q
    || | ||||||||||    
T  1385255 actgatattaaacct 1385269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 2853541 - 2853448
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| ||||    
T  2853541 ggggaccaaaactgctacagttgcaaaacttaggggacggttttgtagttttttcttagggggcgaaaatcgcaacttcgtgaaagttatgggg 2853448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 33401252 - 33401364
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||  || || |||||||||| |||||||| |||||||||||| ||    
T  33401252 ttggggggccaaaactgctacagttgcaaaacttaggggacagttttgtagtttttttttagggagccaaaatcgtaacttcgtaaaagttagggggtga 33401351  T
Q  115 aaaccgttattaa 127  Q
    |||| | ||||||    
T  33401352 aaactgctattaa 33401364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 239041 - 238924
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||||||||||  || | || ||||||||||||||||||||| ||||||||||||||    
T  239041 gggggccaaaactgctacggttgcaaaacttaggggacgattttgtagtttttt-ttaggaggtcaaaatcgcaacttcgtgaaaattagggggcgaaaa 238943  T
Q  118 ccgttattaaacctaaaaa 136  Q
    | | |||||| ||||||||    
T  238942 ctgctattaagcctaaaaa 238924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 12766415 - 12766525
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||  || ||||||||||||||||||||||||||||||||||| ||||    
T  12766415 gggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttttttagggggccaaaatcgcaacttcgtgaaagttagggggtgaaa 12766514  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  12766515 actgctattaa 12766525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 28011327 - 28011444
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||   | ||| |||||||||||||||||||||||||||||| ||||||    
T  28011327 ggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttctcttagggacaaaatcgcaacttcgtgaaagttagggggtgaaaac 28011426  T
Q  119 cgttattaaacctaaaaa 136  Q
     | ||||||  |||||||    
T  28011427 tgctattaaggctaaaaa 28011444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 3579708 - 3579593
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||  || |||||||||||||||||||||||||||||| ||| |||||    
T  3579708 gggggccaaaagtgctacagttgcaaaacttagggggcggttttgtagttttttttttacggggccaaaatcgcaacttcgtgaaagttaagggacgaaa 3579609  T
Q  117 accgttattaaaccta 132  Q
    || | |||||| ||||    
T  3579608 actgctattaagccta 3579593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 17248833 - 17248936
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagtt 105  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||   | ||||||||||||||||||||||| | ||||||    
T  17248833 ttggctttggggggccaaaactgctacaattgcaaaactt-ggggacggttttgtagtttttttttcttatggggccaaaatcgcaacttcctaaaagtt 17248931  T
Q  106 agggg 110  Q
    |||||    
T  17248932 agggg 17248936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 10727318 - 10727182
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||| || | |||||||||||  ||||| || | | |||||||| ||||||||  ||    
T  10727318 aaaaattggccttggggggccaaaactgctacagttgcaaaacttagagggcagttttgtagttttttttcttaggagtccaaaatcacaacttcgctaa 10727219  T
Q  102 agttagggggcgaaaaccgttattaaacctaaaaagt 138  Q
    ||||||| ||||||||| | |||||| ||||||||||    
T  10727218 agttaggaggcgaaaactgctattaagcctaaaaagt 10727182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 18031052 - 18030949
Alignment:
Q  13 ctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    |||||||| ||||||| ||||| |||||||||||||||||| || ||||||||||||||  || | |||||||||||||||||||||||||||||||||     
T  18031052 ctttggggagccaaaattgctacagttgcaaaacttagggg-cgattttgtagttttttt-taggaggccaaaatcgcaacttcgtgaaagttaggggga 18030955  T
Q  113 gaaaac 118  Q
    ||||||    
T  18030954 gaaaac 18030949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 10727394 - 10727514
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||  ||||||| || |||||||||||| |||||| |  ||||||||||||| ||    
T  10727394 gggggccaaaactgccacagatgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcacaactttggaaaagttagggggctaa 10727493  T
Q  116 aaccgttattaaacctaaaaa 136  Q
    ||| | |||||  ||||||||    
T  10727494 aactgctattatgcctaaaaa 10727514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 2840906 - 2840792
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatgggg--ccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||  | | |||  ||||||||||||||| || |||||| | | ||    
T  2840906 ttggggggccaaaactgctacaattgcaaaacttaggggacggttttgtattttttttttttaggggaccaaaatcgcaactttgtaaaagttggagagc 2840807  T
Q  113 gaaaaccgttattaa 127  Q
    |||||| | ||||||    
T  2840806 gaaaactgctattaa 2840792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 26601666 - 26601761
Alignment:
Q  24 caaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    ||||||||||| |||||||||| ||||||| ||||||| ||| ||||||| || |||||  ||||||||||||||||||||||||| ||| |||||    
T  26601666 caaaactgctacagttgcaaaatttagggggcggttttatagtttttttcttaaggggcagaaatcgcaacttcgtgaaagttaggaggcaaaaac 26601761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 8223872 - 8223782
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagg 108  Q
    ||||||||||||||| ||||||||| || ||| | |||||||||||| ||||||| ||  ||   ||||||||||||||||||||||||||    
T  8223872 gggggccaaaactgcaatagttgcataatttaagagacggttttgtaattttttcttagtggatgaaaatcgcaacttcgtgaaagttagg 8223782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 32143448 - 32143553
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagt--tttttcatatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    ||||||||||| |||||||| ||||||||||||||| || |  |||||||||  |||||| ||  ||| ||||||||||||||| | ||||||||||||     
T  32143448 ttggggggccagaactgctacagttgcaaaacttagagggcaattttgtagttatttttcttagagggtcaaaatcgcaacttcataaaagttagggggt 32143547  T
Q  113 gaaaac 118  Q
    ||||||    
T  32143548 gaaaac 32143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 6036758 - 6036647
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||| | |  ||||||||||||||||  ||||||||   ||||||| || |||| |||||||||||||||||| ||||| | |||||||    
T  6036758 gggggccaaaactgccacatatgcaaaacttaggggatagttttgtaactttttttcttagggggtcaaaatcgcaacttcgtggaagtttgcgggcgaa 6036659  T
Q  116 aaccgttattaa 127  Q
    ||| | ||||||    
T  6036658 aactgctattaa 6036647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 30349563 - 30349672
Alignment:
Q  26 aaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgtt 122  Q
    ||||||||| |||||||||||||| | |||| ||||||||   ||||||| || ||||||||||||||||||| |  ||||||||||| | ||||| | |    
T  30349563 aaactgctacagttgcaaaacttatgagacgattttgtagtttttttttcttagggggccaaaatcgcaactttgaaaaagttaggggacaaaaactgct 30349662  T
Q  123 attaaaccta 132  Q
    ||||| ||||    
T  30349663 attaagccta 30349672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 11351829 - 11351942
Alignment:
Q  4 aaaagttggctttg-gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaa 102  Q
    |||| ||||||||| ||||||||||||||||| |||||||||| |||   || |||||||||| |||||  || || || |||||||||||||| | |||    
T  11351829 aaaatttggctttgagggggccaaaactgctacagttgcaaaatttaaatgatggttttgtagattttt-ttaaggagctaaaatcgcaacttcataaaa 11351927  T
Q  103 gttagggggcgaaaa 117  Q
    |||||||||| ||||    
T  11351928 gttagggggcaaaaa 11351942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 3812949 - 3813034
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttag 107  Q
    ||||||||||| ||| | |||||||| |||||||||| |||| |||||||||  || |  ||||||||||||||||| ||||||||||    
T  3812949 gggccaaaactactacaattgcaaaatttaggggacgattttatagtttttt--taggaagccaaaatcgcaacttcttgaaagttag 3813034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 6036852 - 6036938
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttt-ttcatatggggccaaaatcgcaactt 95  Q
    ||||||||||||| | |||||||| | |  ||||||||||||||||| ||||||||||||| ||| || | |||||||||||||||||    
T  6036852 ttggctttgggggtc-aaaactgccacatatgcaaaacttaggggacagttttgtagttttcttcttaggaggccaaaatcgcaactt 6036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 20474905 - 20475005
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||| | || ||||||||||||||| | |||||||||  ||||||| || |||  |||||||||||||| |  ||||||||||||| ||    
T  20474905 gggggccaaaactgccacagatgcaaaacttagggggc-gttttgtagttttttttcttaagggatcaaaatcgcaactttgaaaaagttagggggctaa 20475003  T
Q  116 aa 117  Q
    ||    
T  20475004 aa 20475005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 30349462 - 30349352
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||| ||||||| | | || ||||||||||| ||| ||||||||||||| ||||| || |||  |||||||||||||| | ||||||||| |||| |||    
T  30349462 gggggtcaaaactaccacagatgcaaaacttaaggggcggttttgtagtttttttcttaggggctcaaaatcgcaactttgggaaagttagagggctaaa 30349363  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  30349362 actgctattaa 30349352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 2203352 - 2203405
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||| ||| |||||||||||||||||| | ||||| |||||||||    
T  2203352 gggggccaaaactactacagttgcaaaacttagggggcagttttatagtttttt 2203405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 5003137 - 5003092
Alignment:
Q  82 caaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||    
T  5003137 caaaatcgcaacttcttaaaagttagggggcgaaaactgttattaa 5003092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 8223937 - 8223986
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||  | || |||||||||||||||||||||||||||||||||    
T  8223937 gccaaaactgtcagaggtgcaaaacttaggggacggttttgtagtttttt 8223986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 266235 - 266125
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagt--tttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||| ||||||||||| |||||||||||||| ||| |  |||||||||  |||||| || ||||||||||| ||| ||| | ||||||| |||||| ||    
T  266235 gggggtcaaaactgctacagttgcaaaacttaaggggcaattttgtagttatttttctta-ggggccaaaattgcagctttgggaaagtttgggggctaa 266137  T
Q  116 aaccgttattaa 127  Q
    ||| | ||||||    
T  266136 aactgctattaa 266125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 17532364 - 17532312
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||| | || ||||||||||| ||| |||||||||||||||||    
T  17532364 ggggccaaaactgccacaggtgcaaaacttaaggggcggttttgtagtttttt 17532312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 33399897 - 33399805
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    |||||||||||||| | |  || |||||||||||  ||||||||||||| ||||| ||  |||||||||||||||||| |  |||||||||||    
T  33399897 ggggccaaaactgccacaaatgtaaaacttagggtccggttttgtagtttttttcttagagggccaaaatcgcaactttggaaaagttagggg 33399805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 266312 - 266403
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    |||||||||||||| | || ||||||||||| ||| |||||||||| ||||||  |  ||  |||||||||||| || | ||||||||||||    
T  266312 ggggccaaaactgccacaggtgcaaaacttaaggggcggttttgtaatttttttcttaggacccaaaatcgcaattttgagaaagttagggg 266403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 2853615 - 2853733
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcata-tggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||||||||||| | |  || |||||||||||| |||||||||||  ||||||| ||  ||||||||||| ||||||| | |||||||||| ||  |    
T  2853615 gggggccaaaactgccacatatgaaaaacttagggggcggttttgtagttttttttcttaggggggccaaaattgcaactttgagaaagttaggaggtta 2853714  T
Q  115 aaaccgttattaaacctaa 133  Q
    |||| | |||||| |||||    
T  2853715 aaactgctattaagcctaa 2853733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 239149 - 239257
Alignment:
Q  22 gccaaaactgctatagttgcaaaactta--ggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    ||||||||||| | || ||| |||||||  ||||||| ||||||||||||||  |  |||| | |||||||||||| | |||||||||||||  |||||     
T  239149 gccaaaactgcaacaggtgctaaacttatgggggacgattttgtagtttttttcttaggggaccaaatcgcaactttgagaaagttagggggttaaaact 239248  T
Q  120 gttattaaa 128  Q
    | |||||||    
T  239249 gctattaaa 239257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 9452766 - 9452815
Alignment:
Q  206 tacattgagtttgatcatcacattaaactaagggaaatcatacaagtgag 255  Q
    |||||||||||||||||||||||||||| ||| |||   |||||||||||    
T  9452766 tacattgagtttgatcatcacattaaacaaagagaatctatacaagtgag 9452815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 23585106 - 23585073
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttagggg 53  Q
    ||||||||||||||||||||| ||||||||||||    
T  23585106 gggccaaaactgctatagttgaaaaacttagggg 23585073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 32143372 - 32143319
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| | || ||||||||||| ||| |||||||||| ||||||    
T  32143372 gggggccaaaactgccacaggtgcaaaacttaaggggcggttttgtaatttttt 32143319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 3333819 - 3333685
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaa 102  Q
    |||| ||||| |||||||||||||||||||| | ||||||||||||| |||||||||||||||| ||||| || |||  ||||||||||||||| |||||    
T  3333819 aaaaattggccttggggggccaaaactgctacatttgcaaaacttagaggacggttttgtagtttttttcttaggggatcaaaatcgcaacttcatgaaa 3333720  T
Q  103 gttagggggcgaaaaccgttattaaacctaaaaag 137  Q
    |||||||||||||||| | ||||||| || |||||    
T  3333719 gttagggggcgaaaactgctattaaatcttaaaag 3333685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 32391846 - 32391722
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaa 102  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||||||  | |||||||||| ||||| || |||||||||||| |||||||||||||    
T  32391846 aaaaattggccttggggggccaaaactgctacagttgcaaaacttagggggtgattttgtagtttttttcttaaggggccaaaatcacaacttcgtgaaa 32391747  T
Q  103 gttagggggcgaaaaccgttattaa 127  Q
    |||| ||||||||||| | ||||||    
T  32391746 gttaaggggcgaaaactgctattaa 32391722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 36798362 - 36798487
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||  ||||||| || ||| ||||||||||||||| | |||    
T  36798362 aaaaattggctttggggggccaaaactgctacagttgcaaaacttagggggcggttttgcagttttttttcttaggggaccaaaatcgcaactttgagaa 36798461  T
Q  102 agttagggggcgaaaaccgttattaa 127  Q
    ||||||||||| ||||| | ||||||    
T  36798462 agttagggggctaaaactgctattaa 36798487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 2974819 - 2974953
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtga 100  Q
    |||| ||||| || ||||||||||||||||| || ||||||||||||||| ||||| |||||||||||   | |  ||||||||||||||||||||||||    
T  2974819 aaaaattggccttagggggccaaaactgctacaggtgcaaaacttagggggcggttctgtagttttttttccttggggggccaaaatcgcaacttcgtga 2974918  T
Q  101 aagttagggggcgaaaaccgttattaaacctaaaa 135  Q
    |||||||||||| ||||| | |||||| |||||||    
T  2974919 aagttagggggcaaaaactgctattaagcctaaaa 2974953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 3999213 - 3999085
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaa 102  Q
    |||| ||||| ||| |||||||||||||||| ||||||||||||||   | || |||||||||||||| | || |||| |||||||||||||||||||||    
T  3999213 aaaaattggccttgaggggccaaaactgctacagttgcaaaacttataagtcgattttgtagtttttttcttagggggtcaaaatcgcaacttcgtgaaa 3999114  T
Q  103 gttagggggcgaaaaccgttattaaacct 131  Q
    |||||||||||||||| | ||||||||||    
T  3999113 gttagggggcgaaaactgctattaaacct 3999085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 12406168 - 12406038
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttt--ttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| ||||||||||||||||| || |||||||||||||||||| |||||||||||||||  ||| || ||||||||||||||||||| | |||    
T  12406168 aaaaattggccttggggggccaaaactg-tacagttgcaaaacttagggggcggttttgtagttttctttcttagggggccaaaatcgcaactttgggaa 12406070  T
Q  102 agttagggggcgaaaaccgttattaaacctaa 133  Q
    ||||||||||| ||||| | |||||| |||||    
T  12406069 agttagggggctaaaactgctattaagcctaa 12406038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 28446204 - 28446318
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttt--ttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| || ||| |||||||| ||| ||||| ||| ||||||| ||||    
T  28446204 gggggccaaaactgctacagttgcaaaacttaggggacggttttgtagtttttattcttaggggaccaaaatcacaatttcgtaaaaattaggggacgaa 28446303  T
Q  116 aaccgttattaaacc 130  Q
    ||| |||||||||||    
T  28446304 aactgttattaaacc 28446318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 6130382 - 6130268
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||  ||||| ||| ||||||| || |||||||||||||    
T  6130382 aaaaattggccttggggggccaaaactgctacagttgcaaaacttaggggatggttttgtagttttttttcttat-gggccaacattgcaacttcgtgaa 6130284  T
Q  102 agttagggggcgaaaa 117  Q
     ||||||| |||||||    
T  6130283 tgttagggagcgaaaa 6130268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 20512393 - 20512519
Alignment:
Q  12 gctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatat--ggggccaaaatcgcaacttcgtgaaagttaggg 109  Q
    ||||||||||||||||||||||| ||||||||||||||| || || ||||||| ||||||  | |  |||||||||||||||||||||||||||||| |     
T  20512393 gctttggggggccaaaactgctaaagttgcaaaacttagagggcgattttgtaatttttttttcttaggggccaaaatcgcaacttcgtgaaagttaaga 20512492  T
Q  110 ggcgaaaaccgttattaaacctaaaaa 136  Q
    ||||||||| | |||||| ||| ||||    
T  20512493 ggcgaaaactgctattaagccttaaaa 20512519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 22300798 - 22300919
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaag 103  Q
    |||| ||||| |||| ||||||||||||||| |||||||||||||||||| | |||| ||||||||||| || ||| |||||||||||||| |||| ||     
T  22300798 aaaaattggccttggagggccaaaactgctacagttgcaaaacttaggggtc-gtttcgtagttttttctta-gggaccaaaatcgcaactacgtgcaaa 22300895  T
Q  104 ttagggggcgaaaaccgttattaa 127  Q
    ||||||||||||||| ||||||||    
T  22300896 ttagggggcgaaaactgttattaa 22300919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 40276146 - 40276021
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgta--gttttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||   ||||||| ||  |||| ||||||||||||||  |||    
T  40276146 aaaaattggccttggggggccaaaactgctacagttgcaaaacttaggggacgattttgtaattttttttcttagagggctaaaatcgcaacttcacgaa 40276047  T
Q  102 agttagggggcgaaaaccgttattaa 127  Q
    ||||||||| ||||||| | ||||||    
T  40276046 agttaggggccgaaaactgatattaa 40276021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 35166493 - 35166610
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagtta-gggggcgaa 115  Q
    ||||||||||||||||| || |||||||||||||||  | |||||||| ||||||| || ||| |||||||||||||||||||||||||| |||||||||    
T  35166493 gggggccaaaactgctacagctgcaaaacttagggggtgattttgtagtttttttcttaggggaccaaaatcgcaacttcgtgaaagttaggggggcgaa 35166592  T
Q  116 aaccgttattaaacctaa 133  Q
    ||| | |||||| |||||    
T  35166593 aactgctattaagcctaa 35166610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 19340877 - 19340763
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||  || |||| ||||||||||| || |  ||||||||||||| |    
T  19340877 ttggggggccaaaactgctacagttgcaaaacttagggggcgattttgtaatttttt--tagggggtcaaaatcgcaattttggaaaagttagggggcta 19340780  T
Q  115 aaaccgttattaaacct 131  Q
    |||| | ||||||||||    
T  19340779 aaactgctattaaacct 19340763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 25364024 - 25364139
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||| ||||||||| ||   ||||||| |||||||| |||||||||||||| ||  || ||||||||||| ||||||||||||||||||| ||| ||    
T  25364024 ttgggggaccaaaactgatactattgcaaatcttagggggcggttttgtagtttctttttagggggccaaaattgcaacttcgtgaaagttagagggtga 25364123  T
Q  115 aaaccgttattaaacc 130  Q
    |||| | |||||||||    
T  25364124 aaactgctattaaacc 25364139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 43098145 - 43098027
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    |||||| || |||||||||| |||||||||||| ||| | |||||||||||||||||  | || |||  ||||||||||||||||| ||||||||||| |    
T  43098145 ttggggagcaaaaactgctacagttgcaaaactaaggaggcggttttgtagttttttttcttacgggatcaaaatcgcaacttcgtaaaagttaggggac 43098046  T
Q  113 gaaaaccgttattaaacct 131  Q
    |||||| | ||||||||||    
T  43098045 gaaaactgctattaaacct 43098027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 16132929 - 16133033
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt---ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||||||||||||| ||| |||||| ||||||| |  ||||||||||   ||||| || ||||| ||||||||||||||||||||||| || |||||    
T  16132929 gggggccaaaactgctacagtggcaaaatttagggggcaattttgtagttcttttttcttagggggctaaaatcgcaacttcgtgaaagttgggaggcga 16133028  T
Q  115 aaacc 119  Q
    |||||    
T  16133029 aaacc 16133033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 20629851 - 20629731
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||| ||||||||| || |||| |||||||||||||   |||||||||||||||   | || ||||  ||||||||||||| |||||||||| |||||||    
T  20629851 ggggaccaaaactgttacagtttcaaaacttagggggttgttttgtagtttttttttcttagggggttaaaatcgcaactttgtgaaagttaaggggcga 20629752  T
Q  115 aaaccgttattaaacctaaaa 135  Q
    |||| | ||||||||||||||    
T  20629751 aaactgctattaaacctaaaa 20629731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 24405683 - 24405808
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||||||||||||| |||||| ||| ||||||||||||||| || | |||||||||  ||||||| || || ||||||||||||| |||||||     
T  24405683 aaaaattggctttggggggctaaaactcctacagttgcaaaacttagtgggcagttttgtagttttttttcttagggtgccaaaatcgcaagttcgtgat 24405782  T
Q  102 agttagggggcgaaaaccgttattaa 127  Q
     ||||||| ||| |||| | ||||||    
T  24405783 tgttagggtgcggaaactgctattaa 24405808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 27904683 - 27904801
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||| ||||||||| | |  ||||||||||||||| |||||||||||  ||||||| || ||||||||||||||||||| |  |||||||| |||| ||    
T  27904683 gggggacaaaactgccacaagtgcaaaacttagggggcggttttgtagttttttttcttacggggccaaaatcgcaactttgaaaaagttagagggctaa 27904782  T
Q  116 aaccgttattaaacctaaa 134  Q
    ||| | |||||| ||||||    
T  27904783 aactgctattaagcctaaa 27904801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 39574350 - 39574242
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||||| | |  |||||||||||||||  | |||| ||||||||| | || || |||||||||||||||||||||||||||| ||||||||    
T  39574350 gggggccaaaactgccaca--tgcaaaacttagggggtgattttatagtttttttcttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaa 39574253  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  39574252 actgctattaa 39574242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 35877498 - 35877590
Alignment:
Q  36 agttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    |||||||||||||||||| |||||||||||||||||  | || |||| |||||| ||||| ||||||||||||||||| |||||| | ||||||    
T  35877498 agttgcaaaacttagggggcggttttgtagttttttttctta-ggggtcaaaattgcaacctcgtgaaagttagggggtgaaaactgctattaa 35877590  T

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Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 25910926 - 25911036
Alignment:
Q  22 gccaaaactgctatagttgcaaaactta----ggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||| |||||||||| |||    |||| | ||||||||||||||| | ||  |||| |||||| |||||||||||||||||||||||||||    
T  25910926 gccaaaactgctacagttgcaaaatttaattagggggcagttttgtagtttttttcttagagggctaaaatctcaacttcgtgaaagttagggggcgaaa 25911025  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  25911026 actgctattaa 25911036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 37897921 - 37898028
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||||||||||| | |  ||||||||||||||| |||||||||||||||||  | || ||||||||||||||||||| |  ||||||||||||| |||||    
T  37897921 ggccaaaactgccacatatgcaaaacttagggg-cggttttgtagttttttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaac 37898019  T
Q  119 cgttattaa 127  Q
     | ||||||    
T  37898020 tgctattaa 37898028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 43098227 - 43098335
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||||||| || ||||||||||||| | |||||||||||||||||  || ||||| ||||||| ||||| |  ||||||||||| | ||||    
T  43098227 gggggccaaaactgctacaggtgcaaaacttaggcg-cggttttgtagtttttttttagggggcaaaaatcgtaactttgaaaaagttaggggactaaaa 43098325  T
Q  118 ccgttattaa 127  Q
    | | ||||||    
T  43098326 ctgctattaa 43098335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 19131701 - 19131777
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaactt 95  Q
    |||||||||||||  | || ||||||||||||||| |||||||||||||||||  || ||||| |||||||||||||    
T  19131701 ggggccaaaactgtcacagatgcaaaacttagggggcggttttgtagtttttttttagggggcaaaaatcgcaactt 19131777  T

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Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 30603729 - 30603673
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||||||||| |||||||||||||||||| | |||||||| ||||||    
T  30603729 ttggggggccaaaactgctacagttgcaaaacttagggggcagttttgtaatttttt 30603673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 3333901 - 3334003
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttt--tcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||| | |  ||||||||||| ||  ||||||||||||||||  || || ||||||||||||||||||| |  ||||||||||||| ||    
T  3333901 gggggccaaaactgccacatatgcaaaacttatggagcggttttgtagtttttcttcttagggggccaaaatcgcaactttggaaaagttagggggctaa 3334000  T
Q  116 aac 118  Q
    |||    
T  3334001 aac 3334003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 21066526 - 21066593
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||| ||  |||||||||| ||||||    
T  21066526 aaaaattggccttggggggccaaaactgctacagttgcaaaacttaaggagcggttttgtaatttttt 21066593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 9852985 - 9853038
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||| || |||||||||||||||||| |||||| ||||||||||    
T  9852985 gggggccaaaactgatacagttgcaaaacttagggggcggtttagtagtttttt 9853038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 24779478 - 24779593
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttca--tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    |||||||||  || ||||| |||||||| || ||||||||||| |||||| |  || |||||||||||||||||  | | ||||||||||| |||||||     
T  24779478 gccaaaactaatacagttgtaaaacttatggaacggttttgtaatttttttacttaaggggccaaaatcgcaacagcataaaagttaggggacgaaaact 24779577  T
Q  120 gttattaaacctaaaa 135  Q
    | |||||| |||||||    
T  24779578 gctattaagcctaaaa 24779593  T

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Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 6464302 - 6464392
Alignment:
Q  45 acttaggggacggttttgtagttttttca--tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaa 133  Q
    ||||||||| |||||||||||||| || |  || |||||||||||||||||||| |||||  |||||||| ||||| | |||||| |||||    
T  6464302 acttagggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcctaa 6464392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 37897848 - 37897777
Alignment:
Q  1 actaaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttc 72  Q
    ||||||| ||||  || |||||||||||| |||| | |||||||||||||||| |||||||||| |||||||    
T  37897848 actaaaaattggtcttcgggggccaaaacagctacaattgcaaaacttagggggcggttttgtaattttttc 37897777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 12406240 - 12406341
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatat--ggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||| | || || |||||||||||| ||||||||| |||||||  | |  |||||||||||| |||||| |  ||||||||||||| ||    
T  12406240 gggggccaaaactgccacagatgtaaaacttagggggcggttttgttgtttttttttcttaggggccaaaatctcaactttgaaaaagttagggggctaa 12406339  T
Q  116 aa 117  Q
    ||    
T  12406340 aa 12406341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 31080590 - 31080480
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatgg-ggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||||| | || |||||||||||||||  ||||||||||||||||  |  || || |||||||||||||| |  |||||||| |||| |||    
T  31080590 gggggccaaaactgccacagatgcaaaacttagggggtggttttgtagttttttttttaggaggtcaaaatcgcaactttggaaaagttagagggctaaa 31080491  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  31080490 actgatattaa 31080480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 36798285 - 36798205
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt---ttttcatatggggccaaaatcgcaactt 95  Q
    ||||||||||||||| | || |||||||||||||||  ||||||||||||   ||||| || ||||||||||| |||||||    
T  36798285 gggggccaaaactgccacagatgcaaaacttagggggtggttttgtagtttttttttcttagggggccaaaattgcaactt 36798205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 20629965 - 20630037
Alignment:
Q  39 tgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttaggg 109  Q
    ||||||||||||||| |||||||||||  ||||||| || |||||||||||| |||||| |  ||||||||||    
T  20629965 tgcaaaacttagggggcggttttgtagttttttttcttaaggggccaaaatcacaactttggaaaagttaggg 20630037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 31080686 - 31080731
Alignment:
Q  24 caaaactgctatagttgcaaaacttaggggacggttttgtagtttt 69  Q
    ||||||||||| ||||||||||||||| || |||||||||||||||    
T  31080686 caaaactgctacagttgcaaaacttagagggcggttttgtagtttt 31080731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 40276250 - 40276325
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||||||||||||||||||||||||||||||   | || ||||  |||||||||| || | |||||||||||||    
T  40276250 tgcaaaacttaggggacggttttgtagtttttttttcttagggggttaaaatcgcaaatttgggaaagttaggggg 40276325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 16132858 - 16132780
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttt--ttcatatggggccaaaatcgcaactt 95  Q
    |||| |||||||||| |||| ||||||||||||||| |||||||||| ||||  ||| || | |||||||||||||||||    
T  16132858 ggggaccaaaactgccataggtgcaaaacttagggggcggttttgtaattttatttctta-gtggccaaaatcgcaactt 16132780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 24405603 - 24405488
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    |||||||||||||| | || ||||||||||||  | |||||||||||||||||  |  | || | |||||||||||||| |  ||||||||||| | |||    
T  24405603 ggggccaaaactgccaaagatgcaaaacttagttggcggttttgtagttttttttctcagggagtcaaaatcgcaactttgaaaaagttaggggactaaa 24405504  T
Q  117 accgttattaaaccta 132  Q
    || | |||||||||||    
T  24405503 actgctattaaaccta 24405488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 25910837 - 25910715
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttt-----tcatatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    ||||||||||||||| | || ||||||| |||| ||  |||||||||||||||     || || |||||||||||| ||||||   |||||||||||||     
T  25910837 gggggccaaaactgccacaggtgcaaaatttagagggtggttttgtagtttttgtttttcttagggggccaaaatcacaactttaagaaagttaggggg- 25910739  T
Q  113 gaaaaccgttattaaacctaaaaa 136  Q
     ||||| |||||||| ||||||||    
T  25910738 taaaactgttattaagcctaaaaa 25910715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 26563199 - 26563266
Alignment:
Q  51 gggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||||| ||||||||||||||  || ||||||||||||  || |||||||||||||| |||| |||||    
T  26563199 gggacgattttgtagtttttttttagggggccaaaatcaaaatttcgtgaaagttagagggcaaaaac 26563266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 2974747 - 2974702
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgt 63  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||    
T  2974747 gggggccaaaactgccacagatgcaaaacttagggggcggttttgt 2974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 8284266 - 8284149
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||| ||||||||| | || ||||||||||||| |  ||| ||||||||||||  || | ||||||||||||||||| |  ||||||| ||||  ||||     
T  8284266 gggggcaaaactgccacagatgcaaaacttaggaggtggtattgtagtttttttttaggaggccaaaatcgcaactttggaaaagttatggggttaaaat 8284167  T
Q  119 cgttattaaacctaaaaa 136  Q
     | ||||||| |||||||    
T  8284166 tgctattaaatctaaaaa 8284149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 9852896 - 9852847
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||| | || ||||||||||||||| || ||||||||||||||    
T  9852896 gccaaaactgccacagatgcaaaacttagggggcgattttgtagtttttt 9852847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 18403177 - 18403300
Alignment:
Q  4 aaaagttggctttggggggcca-aaactgctatagttgcaaaacttaggggacggttttgtagt-tttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| ||||||| ||| ||||| |||  ||||||||||||||||| | ||| | |||  |||||| || ||||||||||||||||| || ||||    
T  18403177 aaaaattggccttgggggaccagaaacttctacggttgcaaaacttagggg-cagttatataggctttttcttagggggccaaaatcgcaac-tcatgaa 18403274  T
Q  102 agttagggggcgaaaaccgttattaa 127  Q
    ||||||| ||||||||| | ||||||    
T  18403275 agttaggtggcgaaaactgctattaa 18403300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 30604293 - 30604379
Alignment:
Q  24 caaaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtgaaagttagg 108  Q
    ||||||||| | || ||||||||||||||| |||||||||||   ||||||| || ||||| ||||||||||||| | |||| |||||    
T  30604293 caaaactgccacaggtgcaaaacttagggggcggttttgtagtaattttttctta-ggggctaaaatcgcaactttgagaaaattagg 30604379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 32391940 - 32392012
Alignment:
Q  39 tgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttaggg 109  Q
    ||||||||||| ||| |||||||||||  ||||||| || ||||| ||||||||||||| |  ||||||||||    
T  32391940 tgcaaaacttaaggggcggttttgtagttttttttcttagggggctaaaatcgcaactttgaaaaagttaggg 32392012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 34320035 - 34319979
Alignment:
Q  56 ggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||||||||  | || ||||||||||||||||||||  ||||||||||||    
T  34320035 ggttttgtagttttttttcttagggggccaaaatcgcaacttcaagaaagttagggg 34319979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 40133140 - 40133193
Alignment:
Q  77 ggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacc 130  Q
    ||||||||||||||||||| | |||||||||||||| ||||  | |||||||||    
T  40133140 ggggccaaaatcgcaactttgggaaagttagggggctaaaattgctattaaacc 40133193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 26702663 - 26702707
Alignment:
Q  66 ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||| || || ||||||||||||||||||| |||||||||||    
T  26702663 ttttttcttaaggagccaaaatcgcaacttcgtaaaagttagggg 26702707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 26972396 - 26972440
Alignment:
Q  66 ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||| || || ||||||||||||||||||| |||||||||||    
T  26972396 ttttttcttaaggagccaaaatcgcaacttcgtaaaagttagggg 26972440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 39574435 - 39574491
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||| ||||||||||| | |||||||||||||| |||  ||| ||||||||||||    
T  39574435 ttggggtgccaaaactgccacagttgcaaaacttatggggtggtcttgtagtttttt 39574491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 39642328 - 39642203
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttca--tatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| |||||||||||||||||||| | ||||| |||||||||| ||||||||||||||||| |  ||  ||||||||||||||||||||||||    
T  39642328 aaaaattggccttggggggccaaaactgctacaattgcagaacttagggggcggttttgtagtttttttatttagagggccaaaatcgcaacttcgtgaa 39642229  T
Q  102 agttagggggcgaaaaccgttattaa 127  Q
    ||||||||||||||||| | ||||||    
T  39642228 agttagggggcgaaaactgctattaa 39642203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 23891776 - 23891663
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||||||||| ||||| || |||||||||||| |||||||||||||||||||| |||    
T  23891776 ttggggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagtttttttcttagggggccaaaatcacaacttcgtgaaagttagggagcg 23891677  T
Q  114 aaaaccgttattaa 127  Q
    ||||| | ||||||    
T  23891676 aaaactgctattaa 23891663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 3377698 - 3377822
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaa 102  Q
    |||| ||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||| || |||||||||||| |||||| | ||||    
T  3377698 aaaaattggccttggagggccaaaactgctaaagttgcaaaacttaggggacggttttgtagtttttttcctagggggccaaaatcacaactttgggaaa 3377797  T
Q  103 gttagggggcgaaaaccgttattaa 127  Q
    |||||||||| ||||| | ||||||    
T  3377798 gttagggggctaaaactgctattaa 3377822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 41997753 - 41997637
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||||||| |||||||||||||| | | ||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||||||| |||    
T  41997753 gggggccaaaactgctacagttgcaaaacttatgaggcggttttgtagttgttttcttatggggccaaaatcgcaactttgtgaaaattagggggcaaaa 41997654  T
Q  117 accgttattaaacctaa 133  Q
    |  | ||||||||||||    
T  41997653 attgctattaaacctaa 41997637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 23220759 - 23220880
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    ||||||| |||||||||||| ||||| |||||||||||| ||||||||||| |||||||| | ||| ||||||||| |||||||| ||||||||||||||    
T  23220759 ttgggggaccaaaactgctacagttgtaaaacttagggggcggttttgtagtttttttcagaggggaccaaaatcgtaacttcgtaaaagttagggggcg 23220858  T
Q  114 aaaaccgttattaaacctaaaa 135  Q
    ||||| | ||| || |||||||    
T  23220859 aaaactgctatcaagcctaaaa 23220880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 25486398 - 25486529
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||||||   ||| |||||  ||||||||  | || |||||||||||||||||||    
T  25486398 aaaaattgactttggggggccaaaactgctatagttgtaaaacttaggggacaaatttatagtttattttcataaagagctaaaatcgcaacttcgtgaa 25486497  T
Q  102 agttagggggcgaaaaccgttattaaacctaa 133  Q
    ||||||||||| ||||| | |||||| |||||    
T  25486498 agttagggggcaaaaactgctattaagcctaa 25486529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 12960962 - 12960844
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatgg-ggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||  |  || ||||||||||||||||| |  |||||||| ||||     
T  12960962 ttggggggccaaaactgctatagttgcaaaacttaggaggcggttttgtagttttttttttgggaggccaaaatcgcaactttgaaaaagttagcgggct 12960863  T
Q  114 aaaaccgttattaaaccta 132  Q
    ||||| |||||||| ||||    
T  12960862 aaaactgttattaagccta 12960844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 50226515 - 50226395
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagtta 106  Q
    ||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||||  || |||| || ||||||||||||||||||| |  |||||||    
T  50226515 ttggccttggggggccaaaactgctatagttccgaaacttagggggcggttttgtagtattctttcttagggggccaaaatcgcaactttgaaaaagtta 50226416  T
Q  107 gggggcgaaaaccgttattaa 127  Q
    |||||| ||||| || |||||    
T  50226415 gggggctaaaactgtaattaa 50226395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 1096648 - 1096765
Alignment:
Q  17 ggggggccaaaactgctatagttgcaaaacttaggggacggttttgta---gttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||    ||||||| || ||||| |||||||||| |||||||||||||| | |||    
T  1096648 ggggggccaaaactgctacagttgcaaagcttaggggacggttttgtaaattttttttcttaaggggctaaaatcgcaatttcgtgaaagttagagagcg 1096747  T
Q  114 aaaaccgttattaaacct 131  Q
    ||||| |  |||||||||    
T  1096748 aaaactgcaattaaacct 1096765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 50401580 - 50401686
Alignment:
Q  26 aaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttat 124  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||| || || ||||||||||||||||||  ||| ||| ||||||||||| | |||    
T  50401580 aaactgctacagttgcaaaacttagaggacggttttgtagtttttttcttaaggagccaaaatcgcaacttcgaaaaaattaaggggcgaaaactgctat 50401679  T
Q  125 taaacct 131  Q
    |||||||    
T  50401680 taaacct 50401686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 14979001 - 14979102
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagt-tttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    |||| |||||||| ||| |||||||||| ||||||| |||||||||||| |||||| || | ||||||||| |||||||| |||||||||||||||||||    
T  14979001 ggggtccaaaactactacagttgcaaaatttagggggcggttttgtagtatttttcttaggaggccaaaattgcaacttcatgaaagttagggggcgaaa 14979100  T
Q  117 ac 118  Q
    ||    
T  14979101 ac 14979102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 45739127 - 45739223
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagtta 106  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||| | |||||||| ||||||  || | ||||||||||||||||||||||||||||    
T  45739127 ttggccttggggggccaaaactgctacagttgcaaaacttatggggcagttttgtaatttttt-ttaggaggccaaaatcgcaacttcgtgaaagtta 45739223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 18216802 - 18216683
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    ||||||| |||||||||||||||||| ||||||||| || | |||||| || ||||||| || ||||||||||| | |||||| | |||||||| |||||    
T  18216802 ttgggggtccaaaactgctatagttggaaaacttagagggctgttttgaagtttttttcttagggggccaaaattgtaacttcataaaagttagagggcg 18216703  T
Q  114 aaaaccgttattaaacctaa 133  Q
    ||||| |||||||| |||||    
T  18216702 aaaactgttattaagcctaa 18216683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 25085510 - 25085393
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||| ||||| ||||| ||||||||| || |||||||||||||||||  | || |||| ||||||||||||||  ||||||||||||||||||||    
T  25085510 gggccaaaattgctacagttgtaaaacttagagggcggttttgtagttttttttctta-ggggtcaaaatcgcaactttatgaaagttagggggcgaaaa 25085412  T
Q  118 ccgttattaaacctaaaaa 136  Q
    | | |||||| ||||||||    
T  25085411 ctgctattaagcctaaaaa 25085393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 3377615 - 3377504
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||| | |  ||||||||||||||| |||||||||||||  ||||| || ||||||||||||||||||| |  ||||||||||||| ||    
T  3377615 gggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttggaaaagttagggggctaa 3377516  T
Q  116 aaccgttattaa 127  Q
    ||| | ||||||    
T  3377515 aactgctattaa 3377504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 6320782 - 6320891
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttagggga--cggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    |||||| ||||||||| ||||||||||||||||||   ||||||  |||||||||| || |||||||||||||||||||| | ||||||| |||||||||    
T  6320782 ggggccgaaactgctacagttgcaaaacttagggggggcggtttcatagttttttcttagggggccaaaatcgcaacttcttaaaagtta-ggggcgaaa 6320880  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  6320881 actggtattaa 6320891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 46573026 - 46573118
Alignment:
Q  17 ggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttag 107  Q
    ||||| |||||||||||| |||||||||||||||||| | || ||||||  ||||||| || ||| |||||||||||||||||| ||||||||    
T  46573026 gggggaccaaaactgctacagttgcaaaacttagggggcagtgttgtagttttttttcttaggggaccaaaatcgcaacttcgtaaaagttag 46573118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 46912302 - 46912189
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatgggg-ccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||| ||||||| ||| | |||||||||||||||||| |||||||| ||||||  | | | | |||||||||||||||||||||||||| || |||||||    
T  46912302 ggggtcaaaacttctacaattgcaaaacttaggggacagttttgtaatttttttttttagagaccaaaatcgcaacttcgtgaaagttaaggagcgaaaa 46912203  T
Q  118 ccgttattaaacct 131  Q
    | | ||||||||||    
T  46912202 ctgctattaaacct 46912189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 45739049 - 45738957
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttaggg 109  Q
    ||||||||||||||| |||| ||||||||||| ||| ||||||||||||||||| | || |||| ||||||| |||||| | |||||||||||    
T  45739049 gggggccaaaactgccatagatgcaaaacttaaggggcggttttgtagttttttccttagggggtcaaaatcacaactttgagaaagttaggg 45738957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 27864280 - 27864186
Alignment:
Q  24 caaaactgctatagttgcaaaacttag-gggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    ||||||||||| ||||||||||||||| ||| | |||||||||||||||  || |||  ||||||||||||||||||||||||||| | |||||||    
T  27864280 caaaactgctacagttgcaaaacttagaggggcagttttgtagttttttt-taggggatcaaaatcgcaacttcgtgaaagttaggagacgaaaac 27864186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 16545766 - 16545877
Alignment:
Q  24 caaaactgctatagttgcaaaacttaggggacggttttgtagtttttt----catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||      || | ||| |||||||||||||||| ||||||| |  ||||||||     
T  16545766 caaaactgctacagttgcaaaatttaggggacggttttgtagtttttttttctttaggaggctaaaatcgcaacttcgtaaaagttaagaagcgaaaact 16545865  T
Q  120 gttattaaacct 131  Q
     |||||||||||    
T  16545866 attattaaacct 16545877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 7060756 - 7060621
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgta---gttttttcatatggggccaaaatcgcaacttcgtga 100  Q
    |||| |||||||||||||| ||||| || || ||||||||||||||| || ||||||||||    ||||||| ||  ||  ||||||||||||||| | |    
T  7060756 aaaaattggctttggggggtcaaaattgttacagttgcaaaacttagagggcggttttgtaatttttttttcttagaggatcaaaatcgcaacttcataa 7060657  T
Q  101 aagttagggggcgaaaaccgttattaaacctaaaaa 136  Q
    ||||||  | |||||||| | |||||||||||||||    
T  7060656 aagttaaagagcgaaaactgctattaaacctaaaaa 7060621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 17692886 - 17692939
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||    
T  17692886 gggggccaaaacttctacaattgcaaaacttaggggacggttttgtagtttttt 17692939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 17760887 - 17761002
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||||||||||||||||| | |||||||||||| ||| |||||||||||   ||||||| || |||  |||||| |||||||||| ||||||| | |     
T  17760887 ttggggggccaaaactgctacaattgcaaaacttaaggggcggttttgtagtttttttttcttaggggatcaaaattgcaacttcgtaaaagttaagaga 17760986  T
Q  112 cgaaaaccgttattaa 127  Q
    ||||||| | ||||||    
T  17760987 cgaaaactgctattaa 17761002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 30849334 - 30849281
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  30849334 gggggtcaaaactgctatagttgcaaaatttagaggacggttttgtagtttttt 30849281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 15659107 - 15659041
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||| ||||||||||||| |||||||||||  |||||||||||||||||| ||||| |||||||||||    
T  15659107 aaaaattggctttggggg-ccaaaactgctccagttgcaaaacttagggggcggttgtgtagtttttt 15659041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 6569654 - 6569528
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgt-agttttttcatatggggccaaaatcgcaacttcgtgaaa 102  Q
    |||| |||| ||||||||||||||||||||| | |||||||| ||  ||| ||||||||| | ||||||| || |||| ||||||| ||| || || |||    
T  6569654 aaaaattggttttggggggccaaaactgctacaattgcaaaattttaggggcggttttgtaatttttttcttagggggtcaaaatcacaattttgtaaaa 6569555  T
Q  103 gttagggggcgaaaaccgttattaaac 129  Q
     ||||| ||||||||| | ||||||||    
T  6569554 attaggaggcgaaaactgctattaaac 6569528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 49426193 - 49426291
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||||||||||| | |  ||||||||||| || || |||||||||||||||| ||  |||| ||||||||||||| |  ||||||||||||| ||||    
T  49426193 ggggccaaaactgccacaaatgcaaaacttaaggaacagttttgtagttttttcttagagggctaaaatcgcaactttggaaaagttagggggctaaaa 49426291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 1853571 - 1853444
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaag 103  Q
    |||| |||||||| || |||||||||||||| | ||||| | |||||| | |||||||||||||||||  ||  ||  |||||||||||||||||||||     
T  1853571 aaaaattggctttcggaggccaaaactgctacaattgcata-cttaggtggcggttttgtagtttttttttagaggatcaaaatcgcaacttcgtgaaaa 1853473  T
Q  104 ttagggggcgaaaaccgttattaaaccta 132  Q
    |||    |||||||| | |||||||||||    
T  1853472 ttaaaacgcgaaaactgctattaaaccta 1853444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 5287314 - 5287246
Alignment:
Q  66 ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaa 134  Q
    ||||||| || |||||||||||||||||||||||||||||| ||| |||| || || ||||| ||||||    
T  5287314 ttttttcttaaggggccaaaatcgcaacttcgtgaaagttaagggccgaacactgtaattaagcctaaa 5287246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 18632602 - 18632650
Alignment:
Q  79 ggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    |||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  18632602 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 18632650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 16874599 - 16874521
Alignment:
Q  41 caaaacttaggggacggttttgtagttttttcatat--ggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||| ||| |||||||||||||||||  | |  |||| || |||||||||||||| ||||||||||||||||||    
T  16874599 caaaacttaaggggcggttttgtagtttttttttcttaggggtcataatcgcaacttcgtaaaagttagggggcgaaaa 16874521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 48319609 - 48319699
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgta--gttttttcatatggggccaaaatcgcaacttcgtgaaagttaggg 109  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||   |||||||  || | | |||||| ||||||| |||||||||||||    
T  48319609 ggccaaaactgctacagttgcaaaacttagggggcggctttgtaattttttttctcattgagtcaaaatagcaactttgtgaaagttaggg 48319699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 17760795 - 17760700
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt----catatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    |||||||||||| | |  |||||||||||||||  ||||||||||||||||    | || ||||||||||||||||||| | | ||||||||||||    
T  17760795 ggccaaaactgccacatatgcaaaacttagggggtggttttgtagttttttttttcttagggggccaaaatcgcaactttgaggaagttagggggc 17760700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 39642400 - 39642461
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||| ||||||||||| | |  ||||||||||||||| |||||||||||||||||    
T  39642400 ttggctttgggg-gccaaaactgccacaaatgcaaaacttagggggcggttttgtagtttttt 39642461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 14978909 - 14978800
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcat-atggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||||||||| | | || ||||||||||||||| | |||||||||||||||  | | ||  ||||||||||||||| |  ||||||||||||| ||||    
T  14978909 ggggccaaaactaccacaggtgcaaaacttagggggcagttttgtagtttttttttgaaggacccaaaatcgcaactttggaaaagttagggggctaaaa 14978810  T
Q  118 ccgttattaa 127  Q
    | | ||||||    
T  14978809 ctgctattaa 14978800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 25085595 - 25085691
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||| | || | |||||||| |||  ||| |||||||||||||| || |||||||||||| |||||| |  ||||||||||||| ||||    
T  25085595 gggccaaaactgccacaggtacaaaacttggggtgcggatttgtagttttttctta-ggggccaaaatcacaactttggaaaagttagggggctaaaa 25085691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 8301545 - 8301597
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttt 70  Q
    ||||| ||||||||| | || ||||||| ||||||||||||||||||||||||    
T  8301545 gggggtcaaaactgccacagatgcaaaatttaggggacggttttgtagttttt 8301597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 16874707 - 16874823
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatgggg-ccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    ||||||||||| | || ||||||||||| ||| ||||||||||||||||| | ||  ||| ||||||| ||||||| | |||||||||||||  |||||     
T  16874707 gccaaaactgccacagatgcaaaacttatggggcggttttgtagtttttttcttagagggtccaaaattgcaactttgagaaagttagggggttaaaact 16874806  T
Q  120 gttattaaacctaaaaa 136  Q
    | |||||| | ||||||    
T  16874807 gctattaagcataaaaa 16874823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 18632429 - 18632341
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagtta 106  Q
    ||||||||||||||  | |  |||||||||||| || |  ||||||||||||||| || || | |||||||||||||| ||||||||||    
T  18632429 gggggccaaaactgtcacaaatgcaaaacttagagggcaattttgtagttttttcttagggagtcaaaatcgcaactttgtgaaagtta 18632341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 30849451 - 30849483
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||||||||||||||||||||||    
T  30849451 tgcaaaacttaggggacggttttgtagtttttt 30849483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 46572919 - 46572887
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||||||||||||||||||||||    
T  46572919 tgcaaaacttaggggacggttttgtagtttttt 46572887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 50226592 - 50226644
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||||| || |||||||||||| || |||||| ||||||||||    
T  50226592 ggggccaaaactgctacaggtgcaaaacttagagggcggtttagtagtttttt 50226644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 44672422 - 44672316
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgt 121  Q
    ||||||||||| | |  ||||||||||||||| ||||||||||  |||||  || |||| ||||||| |||||| | |||||||||| ||| |||||  |    
T  44672422 gccaaaactgccacatatgcaaaacttagggggcggttttgta-atttttgttagggggtcaaaatcacaactttgagaaagttaggaggctaaaacttt 44672324  T
Q  122 tattaaac 129  Q
    ||||||||    
T  44672323 tattaaac 44672316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 1096580 - 1096470
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgt-agttttttcatatgggg-ccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    |||||||||||||| | || ||| |||||||| || ||||||||| ||||||||  |  |||| ||||||||||||||| |  ||||||| ||||| |||    
T  1096580 ggggccaaaactgccacagatgcgaaacttagagggcggttttgttagttttttttttaggggaccaaaatcgcaactttggaaaagttaaggggctaaa 1096481  T
Q  117 accgttattaa 127  Q
    || ||||||||    
T  1096480 actgttattaa 1096470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 51250538 - 51250488
Alignment:
Q  77 ggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    ||||||||||||||||||| |  ||||||||||||| ||||| ||||||||    
T  51250538 ggggccaaaatcgcaactttgaaaaagttagggggctaaaactgttattaa 51250488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 12961049 - 12961098
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||| | |||||||||| |||||||||  ||||||||||||||    
T  12961049 gccaaaactgccacagttgcaaaatttaggggacaattttgtagtttttt 12961098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 46313268 - 46313313
Alignment:
Q  66 ttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||| ||| ||||||||||||||| ||| |||||||||||||||    
T  46313268 ttttttaatagggggccaaaatcgcacctttgtgaaagttaggggg 46313313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 46505286 - 46505233
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||  || | ||||||||||||||| ||||| ||||||||||||||    
T  46505286 gggggccaaaaaagccacagttgcaaaacttagtggacgattttgtagtttttt 46505233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 7579757 - 7579662
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtt--ttttcata-tggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacct 131  Q
    |||||||||||| || |||||||||||||  ||||| ||  |||||||||||||||||||   |||||||| ||||  ||||| | ||||||||||    
T  7579757 tgcaaaacttagcgggcggttttgtagttttttttcttaggggggccaaaatcgcaacttttggaaagttaaggggttaaaactgctattaaacct 7579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 7579860 - 7579915
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||| |||||||||| ||| | |||||||| ||||||| |||||||||||||||||    
T  7579860 ttgggaggccaaaactactacaattgcaaaatttagggg-cggttttgtagtttttt 7579915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 16298167 - 16298056
Alignment:
Q  23 ccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgtt 122  Q
    |||||||||||| ||||| |||||||| | | | ||||||||||| |||  || | ||| |||||| ||| ||| ||||| |||| || | ||||| |||    
T  16298167 ccaaaactgctacagttgtaaaacttatgtg-cagttttgtagttcttttttaggaggctaaaatcacaatttcatgaaaattagaggacaaaaactgtt 16298069  T
Q  123 attaaacctaaaa 135  Q
    |||||||||||||    
T  16298068 attaaacctaaaa 16298056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 32295064 - 32295016
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagttt 68  Q
    ||||||||||||||| | |||||||||||||| |  |||||||||||||    
T  32295064 gggccaaaactgctacaattgcaaaacttaggaggtggttttgtagttt 32295016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 44436850 - 44436818
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||||| |||||||||||||||    
T  44436850 tgcaaaacttaggggacagttttgtagtttttt 44436818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 46880786 - 46880738
Alignment:
Q  82 caaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacc 130  Q
    ||||||||||||||||| ||| |||||| |||||||| | |||||||||    
T  46880786 caaaatcgcaacttcgtaaaaattagggagcgaaaactgctattaaacc 46880738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 46895767 - 46895842
Alignment:
Q  45 acttaggggacggttttgtagttttttca--tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    ||||||||| |||||||||| ||| || |  ||||||| ||||||||||||||| |||||  |||||||| |||||    
T  46895767 acttagggggcggttttgtaatttatttagttatggggtcaaaatcgcaacttcttgaaacatagggggccaaaac 46895842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 38958046 - 38958163
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||||||||||| || |||  |||||||| || |||||||||||||||||||||||||    
T  38958046 ggggtcaaaactgctacagttgcaaaacttagggggcggttttgtagttttttcttaggggctcaaaatcgtaatttcgtgaaagttagggggcgaaaac 38958145  T
Q  119 cgttattaaacctaaaaa 136  Q
     | |||||| ||||||||    
T  38958146 tgctattaagcctaaaaa 38958163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 46226885 - 46227005
Alignment:
Q  13 ctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    ||||||||||| |||||||||| |||||||||| ||| |||||||||||||||||||||  || |||| ||||||||||||||||||||||||||||| |    
T  46226885 ctttggggggctaaaactgctacagttgcaaaagttatgggacggttttgtagtttttt-ttagggggtcaaaatcgcaacttcgtgaaagttaggggac 46226983  T
Q  113 gaaaaccgttattaaacctaaa 134  Q
    |||||| | |||||| ||||||    
T  46226984 gaaaactgctattaatcctaaa 46227005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 4474267 - 4474386
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||  || |||||||||||||||||||||| ||||||||| || ||    
T  4474267 ttggggggccaaaactgctacagttgcaaaacttagagggcggttttgtaatttttt-ttagggggccaaaatcgcaacttcgtaaaagttaggaggaga 4474365  T
Q  115 aaaccgttattaaacctaaaa 135  Q
    |||| | ||||||||||||||    
T  4474366 aaactgctattaaacctaaaa 4474386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 19404509 - 19404401
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    ||||| ||||||||||||||||||||| ||||||| | |||||||||||||||| ||  |||| |||||||||||||||||||||||||||| |||||||    
T  19404509 ggggctaaaactgctatagttgcaaaatttagggggcagttttgtagttttttcttagagggctaaaatcgcaacttcgtgaaagttaggggacgaaaac 19404410  T
Q  119 cgttattaa 127  Q
     ||||||||    
T  19404409 tgttattaa 19404401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 47189719 - 47189601
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagg 108  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||| ||||||| |||||||||  || |||||||||||||||||||| | |||||||||    
T  47189719 ttggttttggagggccaaaactgctacagttgcaaaacttaaggggcggttttatagtttttttttagggggccaaaatcgcaacttcataaaagttagg 47189620  T
Q  109 gggcgaaaaccgttattaa 127  Q
    | |||||||| ||||||||    
T  47189619 gagcgaaaactgttattaa 47189601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 17773286 - 17773173
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||  | || || |||||||||||||||| ||||||||||||||||    
T  17773286 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 17773188  T
Q  113 gaaaaccgttattaa 127  Q
    |||||| | ||||||    
T  17773187 gaaaactgctattaa 17773173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 19074587 - 19074474
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||  | || || |||||||||||||||| ||||||||||||||||    
T  19074587 ttggggggccaaaactgccacagttgcaaaacttagggg-cggttttgtagtttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 19074489  T
Q  113 gaaaaccgttattaa 127  Q
    |||||| | ||||||    
T  19074488 gaaaactgctattaa 19074474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 28944164 - 28944283
Alignment:
Q  16 tggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||| |||| ||||||||||||||||| || ||||||||||| | |    
T  28944164 tggggggccaaaactgctgaagttgcaaaacttaagggacggttttgtagtttttttcttatgaggccaaaatcgcaacttagtaaaagttaggggacaa 28944263  T
Q  115 aaaccgttattaaacctaaa 134  Q
    |||| | |||||| ||||||    
T  28944264 aaactgctattaagcctaaa 28944283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 3192979 - 3193097
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    ||||||||||||||||| || |||||||||||||||||| |||||||| || ||||||| || |||| ||||||||||||||| |||||||||||||| |    
T  3192979 ttggggggccaaaactgttacagttgcaaaacttaggggtcggttttgaagtttttttcttagggggtcaaaatcgcaacttcttgaaagttagggggtg 3193078  T
Q  114 aaaaccgttattaaaccta 132  Q
    ||||| | |||||| ||||    
T  3193079 aaaactgctattaagccta 3193097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 14856674 - 14856549
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||| ||| || ||||||||||  ||||| || || | ||||||||||||||||||||    
T  14856674 aaaaattggcattggggggccaaaactactatagttgcaaaacttatggggcgattttgtagttttttttcttagggagtcaaaatcgcaacttcgtgaa 14856575  T
Q  102 agttagggggcgaaaaccgttattaa 127  Q
    |||||||| |||||||| | ||||||    
T  14856574 agttagggtgcgaaaactgctattaa 14856549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 14340861 - 14340745
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttt--ttcatatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||||||||| |||||||||||||| | |||||||||||  ||| |||||||||||||||  ||| || ||| ||||||||| |||||||||||    
T  14340861 aaaaattggctttgggaggccaaaactgctacaattgcaaaacttgtggggcggttttgtagtttttattcgtaggggaccaaaatcgtaacttcgtgaa 14340762  T
Q  102 agttagggggcgaaaac 118  Q
    |||||||||||||||||    
T  14340761 agttagggggcgaaaac 14340745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 51315684 - 51315804
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||||||||  | || ||||||||||||||||||| | |||||||||||||| ||    
T  51315684 gggggccaaaactgccacaggtgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaa 51315783  T
Q  116 aaccgttattaaacctaaaaa 136  Q
    ||| | |||||| ||||||||    
T  51315784 aactgctattaagcctaaaaa 51315804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 54719107 - 54718997
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||  || |||  |||||||||||||||||||||||||| || |||    
T  54719107 ttggggggccaaaactgctacagttgcaaaacttagaggacggttttatagtttttt--taggggttcaaaatcgcaacttcgtgaaagttagtggacga 54719010  T
Q  115 aaaccgttattaa 127  Q
    |||| | ||||||    
T  54719009 aaactgctattaa 54718997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 28204605 - 28204478
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaag 103  Q
    |||| ||||| ||||||| |||||||||||| ||||| |||| ||||||| || ||||||||||||||  || |||| ||||||||||||||||||||||    
T  28204605 aaaaattggccttgggggaccaaaactgctacagttgtaaaatttagggggcgattttgtagttttttt-tagggggtcaaaatcgcaacttcgtgaaag 28204507  T
Q  104 ttagggggcgaaaaccgttattaaaccta 132  Q
    ||| ||||||||||| | |||||| ||||    
T  28204506 ttaaggggcgaaaactgctattaagccta 28204478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 86754 - 86866
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtgaaagtt 105  Q
    ||||| ||||||| |||||||||||| |||||||||||||||| | ||||||||||    ||||||| || |||||||||||||||||||| ||||||||    
T  86754 ttggccttgggggaccaaaactgctacagttgcaaaacttaggaggcggttttgtatattttttttcttagggggccaaaatcgcaacttcatgaaagtt 86853  T
Q  106 agggggcgaaaac 118  Q
    ||||| |||||||    
T  86854 aggggacgaaaac 86866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 54464360 - 54464464
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||||||||||||||| | |||||||||||||||||| |||||||||||   ||||||| || |||||||| ||||||| |||||||||||||||| |    
T  54464360 ttggggggccaaaactgccagagttgcaaaacttaggggccggttttgtagtttttttttcttagggggccaatatcgcaaattcgtgaaagttagggag 54464459  T
Q  112 cgaaa 116  Q
    |||||    
T  54464460 cgaaa 54464464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 15978893 - 15978966
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaa 92  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||| |||||||||||||||    
T  15978893 ggggccaaaactgctatagttgcaaaacttagggggcggttttgtagtttttttttatagggccaaaatcgcaa 15978966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 28712663 - 28712772
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||| ||||||||||| |||||||||||||||||| || |||||||| ||||||| || |||||||||||| ||||||| | ||||||||||||||||||    
T  28712663 ggggtcaaaactgctacagttgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaacttcataaaagttagggggcgaaaa 28712762  T
Q  118 ccgttattaa 127  Q
    | | ||||||    
T  28712763 ctgctattaa 28712772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 1814662 - 1814562
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||| ||||||||||||||||||||||||| |||  ||||||||||||||||  || ||| | ||||| |||||||||| ||||||||||||||||||    
T  1814662 gggggcaaaaactgctatagttgcaaaacttaaggggtggttttgtagtttttttctaggggactaaaattgcaacttcgtaaaagttagggggcgaaaa 1814563  T
Q  118 c 118  Q
    |    
T  1814562 c 1814562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 25248887 - 25248998
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||||||| ||||||||||||||  || ||| |||||||||||||  || | |||||||||||||||||||||||| |||  |||||||||    
T  25248887 gggggccaaaactgctacagttgcaaaacttaaagggcggatttgtagtttttttttaggaggccaaaatcgcaacttcgtgaaaattaaagggcgaaaa 25248986  T
Q  118 ccgttattaaac 129  Q
    |  |||||||||    
T  25248987 ctattattaaac 25248998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 44585986 - 44586100
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||| | ||  |||||||||||||| |||||||||||||||||  | || ||||||||||||||||||| | |||||||||||||| ||    
T  44585986 gggggccaaaactgccacagaagcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaa 44586085  T
Q  116 aaccgttattaaacc 130  Q
    ||| | |||||||||    
T  44586086 aactgctattaaacc 44586100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 14349309 - 14349424
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||||||||||||| || |||||||||||||| | | | |||||||||||||||  || ||||  |||||||||||||||| |||||||||||||||    
T  14349309 ttggggggccaaaactgttacagttgcaaaacttaagaggcagttttgtagtttttt--tagggggttaaaatcgcaacttcgtaaaagttagggggcga 14349406  T
Q  115 aaaccgttattaaaccta 132  Q
    |||| | |||||| ||||    
T  14349407 aaactgctattaagccta 14349424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 43747395 - 43747278
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||||||||||||||||||| | ||||||||||||  || || |||||||||||||| | || |||||||||||||||||||||| |||||||  || ||    
T  43747395 ttggggggccaaaactgctacaattgcaaaacttattgggcgattttgtagtttttttcttagggggccaaaatcgcaacttcgtaaaagttataggacg 43747296  T
Q  114 aaaaccgttattaaacct 131  Q
    ||||| | ||||||||||    
T  43747295 aaaactgctattaaacct 43747278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 12759618 - 12759506
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttt-------ttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||       ||| || |||||||||||||||| ||| |||||||||||||||     
T  12759618 ggccaaaactgctacagttgcaaaacttagggg-cggttttgtagtttttttttccttcttaaggggccaaaatcgcaatttcttgaaagttagggggca 12759520  T
Q  114 aaaaccgttattaa 127  Q
    ||||| ||||||||    
T  12759519 aaaactgttattaa 12759506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 27178252 - 27178143
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagt--tttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    |||||||||| ||||||| |||||||||||||||  ||||||||||||  |||||| || |||||| ||||||||||||||| ||||||||||| |||||    
T  27178252 ggggccaaaattgctatatttgcaaaacttagggtgcggttttgtagttatttttcttagggggcc-aaatcgcaacttcgtaaaagttaggggacgaaa 27178154  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  27178153 actgctattaa 27178143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8024905 - 8024835
Alignment:
Q  1 actaaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||    
T  8024905 actaaaaattggctttggggggccaaaactgctacagttgcaaaacgtagggggcggttttgtaatttttt 8024835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 44436511 - 44436449
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  44436511 ttggccttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtttttt 44436449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 44433183 - 44433074
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt----catatggggccaaaatcgcaacttcgtg 99  Q
    |||| ||||| ||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||||    | || || ||||||||| ||||||||||    
T  44433183 aaaaattggccttgggaggccaaaactgctatagttgcaaaacctagggggcggttttttagttttttttttctta-ggagccaaaatcacaacttcgtg 44433085  T
Q  100 aaagttagggg 110  Q
    |||||||||||    
T  44433084 aaagttagggg 44433074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 36677614 - 36677519
Alignment:
Q  41 caaaacttaggggacggttttgtagttttttcatatggg-gccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaaa 135  Q
    ||||||||| |||| | ||||||||||||||  |  ||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  36677614 caaaacttaagggaagattttgtagttttttttttagggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaagcctaaaa 36677519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 36687696 - 36687601
Alignment:
Q  41 caaaacttaggggacggttttgtagttttttcatatggg-gccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaaa 135  Q
    ||||||||| |||| | ||||||||||||||  |  ||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  36687696 caaaacttaagggaagattttgtagttttttttttagggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaagcctaaaa 36687601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 578525 - 578431
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||||||||||  ||| ||||||||||||||||| ||| ||||||||||||||  |  |||| ||||||| ||||||||||||||||| ||||||    
T  578525 ggggccaaaaccactacagttgcaaaacttagggaacgattttgtagtttttttcttaggggtcaaaatctcaacttcgtgaaagttaaggggcg 578431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 25154372 - 25154434
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  25154372 ttggccttggggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagtttttt 25154434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 52008454 - 52008548
Alignment:
Q  24 caaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    ||||||||||||||||||||||||||  || | |||||||||||||||  |  ||| ||||||| ||||||||||| |||||||| |||||||||    
T  52008454 caaaactgctatagttgcaaaacttacagggcagttttgtagtttttttcttagggaccaaaattgcaacttcgtggaagttaggaggcgaaaac 52008548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 35359184 - 35359286
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagt---tttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||||||||||| ||||||||||||||||| || || |||||||||   |||||| || |||||||||||  |||||||||||||||||| ||| ||    
T  35359184 gggggccaaaactgccatagttgcaaaacttagagggcgattttgtagtttgtttttctta-ggggccaaaattacaacttcgtgaaagttagagggtga 35359282  T
Q  115 aaac 118  Q
    ||||    
T  35359283 aaac 35359286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 53184704 - 53184828
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaa 102  Q
    |||| |||||||||||||||||||||||||  |||||||||  |||  || |  |||||||||||||| | || | ||| |||||||||||||||| |||    
T  53184704 aaaaattggctttggggggccaaaactgcttcagttgcaaattttaatgggcaattttgtagtttttttcttaggtggcaaaaatcgcaacttcgtaaaa 53184803  T
Q  103 gttagggggcgaaaaccgttattaa 127  Q
    ||||||| |||||||| | ||||||    
T  53184804 gttagggagcgaaaactgctattaa 53184828  T

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Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 54719197 - 54719290
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||||||| ||| || |  ||||||||||||||| |||||||||||||||||| || | ||||||||||||||||| |   |||||||||||    
T  54719197 gggggccaaacctggtacatatgcaaaacttagggggcggttttgtagttttttcttaggaggccaaaatcgcaactttgaataagttaggggg 54719290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 25902553 - 25902664
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||| | |  ||||||||||| | | |||||||||||||||||  | || || |||||||||||||||| | |||||||||||||| ||    
T  25902553 gggggccaaaactgccacaaatgcaaaacttatgaggcggttttgtagttttttttcttagggagccaaaatcgcaactttgagaaagttagggggctaa 25902652  T
Q  116 aaccgttattaa 127  Q
    ||| | ||||||    
T  25902653 aactgatattaa 25902664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 33329722 - 33329614
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    |||||| ||||||||||||||   |||| ||||||| |||||||||||||||||   | || |||| ||||||||||||||||| |||||||| ||||||    
T  33329722 gggggcaaaaactgctatagt---aaaagttagggg-cggttttgtagtttttttttcttagggggtcaaaatcgcaacttcgtaaaagttagagggcga 33329627  T
Q  115 aaaccgttattaa 127  Q
    |||| | ||||||    
T  33329626 aaactgctattaa 33329614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 44585904 - 44585848
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||    
T  44585904 ttggggggcgaaaactgctacagttgcaaaatttagggggcggttttgtagtttttt 44585848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 51315610 - 51315562
Alignment:
Q  16 tggggggccaaaactgctatagttgcaaaacttaggggacggttttgta 64  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  51315610 tggggggccaaaactgctacagttgcaaaacttagggggcggttttgta 51315562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 48348365 - 48348258
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcat-atggggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    |||||||||| ||  |||||||||||||||||||| ||||| |||||||||  | |     |||||||||||||||||| |||||||||||||||||||     
T  48348365 ggccaaaactactgcagttgcaaaacttaggggaccgttttatagttttttttttaaaaaaccaaaatcgcaacttcgtaaaagttagggggcgaaaact 48348266  T
Q  120 gttattaa 127  Q
    | ||||||    
T  48348265 gctattaa 48348258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 8025003 - 8025073
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttaggg 109  Q
    |||||||||||||||||| ||||||| ||||||| |||||||| ||| ||||||||| |  ||||||||||    
T  8025003 tgcaaaacttaggggacgattttgtatttttttcttatggggctaaagtcgcaactttgaaaaagttaggg 8025073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 42686572 - 42686478
Alignment:
Q  41 caaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaa 134  Q
    |||||| |||||||||||||||||||| ||||| || |||| ||||||||||||||  ||||| ||||| ||  ||||| | |||||||||||||    
T  42686572 caaaacataggggacggttttgtagtttttttcttagggggtcaaaatcgcaactttttgaaacttaggaggttaaaactgctattaaacctaaa 42686478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 578613 - 578727
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||| | | || || |||||||||||| |||||||||||||||||  | || ||||||||||||||||||| |  ||||||||| ||| ||    
T  578613 gggggccaaaactaccacaggtgaaaaacttagggg-cggttttgtagttttttttctta-ggggccaaaatcgcaactttggaaaagttaggaggctaa 578710  T
Q  116 aaccgttattaaaccta 132  Q
    ||| | |||||||||||    
T  578711 aactgatattaaaccta 578727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 1814775 - 1814864
Alignment:
Q  39 tgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    ||||||||||||||||||||||||||| ||||||| || ||| ||||||||| ||||| |  ||||||||| ||| ||||| | ||||||    
T  1814775 tgcaaaacttaggggacggttttgtagtttttttcttaggggtccaaaatcgaaactttggaaaagttaggaggctaaaactgctattaa 1814864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 43747480 - 43747533
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||||||||||    
T  43747480 gggggccaaaactgccataaatgcaaaacttagggggcggttttgtagtttttt 43747533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 44436598 - 44436651
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||||||||    
T  44436598 gggggccaaaactgccacagatgcaaaacttagggggcggttttgtagtttttt 44436651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 3916640 - 3916734
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||||||| ||| | ||||||||||||||| ||||||||||||||||||  || | | |||||||| ||||||||| ||||||| || |||||||    
T  3916640 ggccaaaactactacaattgcaaaacttaggg-acggttttgtagtttttt-ttaggtgaccaaaatcacaacttcgtaaaagttaaggagcgaaaa 3916734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 36567001 - 36566941
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgta 64  Q
    |||| ||||| |||||||||||||||||||| ||||||||||| |||||| | ||||||||    
T  36567001 aaaaattggcattggggggccaaaactgctaaagttgcaaaacataggggtctgttttgta 36566941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 7218263 - 7218188
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgt-agttttttcatatggggccaaaatcgcaactt 95  Q
    ||||||||||||||||||||||||||||||| | |  |||||| | ||||||||||  | ||||||||||||||||    
T  7218263 ggccaaaactgctatagttgcaaaacttaggaggcaattttgtaatttttttcatagagagccaaaatcgcaactt 7218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 28712561 - 28712490
Alignment:
Q  25 aaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaactt 95  Q
    |||||||||| || ||||||||||||||| || |||||||||| ||||| || |||||||||||| ||||||    
T  28712561 aaaactgctacagatgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaactt 28712490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 14992857 - 14992939
Alignment:
Q  55 cggttttgtagttttttcat-atggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaaaa 136  Q
    |||||||||||||||||  | ||| |||||||||| ||||||   |||||||||| ||| ||||| |||||||||||||||||    
T  14992857 cggttttgtagttttttttttatgaggccaaaatcacaactttaggaaagttaggcggctaaaactgttattaaacctaaaaa 14992939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 33329817 - 33329937
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttt-------ttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||||||| | |  ||||| |||||||||||||||||||||||||       ||| || ||||||||||||||||| | | ||||||| ||||    
T  33329817 gggggccaaaactgccacaaatgcaatacttaggggacggttttgtagttttttttttcttcttagggggccaaaatcgcaacgttgggaaagttggggg 33329916  T
Q  111 gcgaaaaccgttattaaacct 131  Q
    |  ||||| | ||||||||||    
T  33329917 gttaaaactgctattaaacct 33329937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 38957960 - 38957880
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaactt 95  Q
    ||||||||||||||| | |  ||||||||||||||| |||||||||||||||||   | ||  ||||||||||||||||||    
T  38957960 gggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtttttttttcttaaagggccaaaatcgcaactt 38957880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 43586681 - 43586582
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||| ||||||| | || | ||||||||||||||||  |  ||| |||||||||| || | |||||||||||||||| ||| ||||||| |||||||    
T  43586681 ttgggggaccaaaaccgttacaattgcaaaacttagggg--gactttatagttttttcttaggaggccaaaatcgcaactccgtaaaagttaaggggcga 43586584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 3192885 - 3192832
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttc 72  Q
    |||||| ||||| ||| ||||| |||||||||||| ||||||||||||||||||    
T  3192885 ggggcctaaactactacagttgaaaaacttaggggtcggttttgtagttttttc 3192832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 38177252 - 38177191
Alignment:
Q  56 ggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||| ||||||| || ||||||||||||||||||| | |||||||| ||||| ||||    
T  38177252 ggttttgtaattttttcttagggggccaaaatcgcaactttgggaaagttaaggggctaaaa 38177191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 44433264 - 44433317
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| | |  ||||||||||||||| |||||||||||||||||    
T  44433264 gggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtttttt 44433317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 86687 - 86571
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||||||| |  ||||||||||||||  | ||||| |||||||||| ||   | ||||||| |||||||    ||||||||||||| ||||    
T  86687 gggggccaaaactgctacaagtgcaaaacttagggcgcagttttatagttttttcttagtagaccaaaatagcaacttttaaaaagttagggggctaaaa 86588  T
Q  118 ccgttattaaacctaaa 134  Q
      | |||||||||||||    
T  86587 ttgctattaaacctaaa 86571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 25902518 - 25902463
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||||| || |||||||||| ||||||| | |||||||||||||||    
T  25902518 ttggggggccaaaactgttacagttgcaaaatttagggg-cagttttgtagtttttt 25902463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 43586782 - 43586838
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaactt 95  Q
    |||||||| |||| |||| ||||||||||||||| || | |||||||||||||||||    
T  43586782 tgcaaaacataggagacgattttgtagttttttcttaggaggccaaaatcgcaactt 43586838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 44624833 - 44624883
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||| ||||||||| |||||||||||||||  | |||||||||||||||||    
T  44624833 ggccgaaactgctacagttgcaaaacttagatggcggttttgtagtttttt 44624883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 7218351 - 7218404
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| | || || |||||||||| ||||| |||||||||||||    
T  7218351 gggggccaaaactgccacagatgtaaaacttaggagacggctttgtagtttttt 7218404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 14340934 - 14340987
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| | |  |||||||||||||||||  ||||||||||||||    
T  14340934 gggggccaaaactgccacaaatgcaaaacttaggggactattttgtagtttttt 14340987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 14856756 - 14856849
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    ||||||||||||||  | |  ||||||| |||||||| |||||| |||| ||||  |  ||||||||||||||| ||| | |||||||||||||    
T  14856756 gggggccaaaactggcacatgtgcaaaatttaggggatggttttttagtatttttctcgggggccaaaatcgcatctttgggaaagttaggggg 14856849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 20432254 - 20432193
Alignment:
Q  66 ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    ||||||| || ||| ||||| |||||||||||| ||||||||||||| ||||| | ||||||    
T  20432254 ttttttcttaggggaccaaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaa 20432193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 44127547 - 44127626
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaactt 95  Q
    |||| |||||||| || ||||||||| |||||||| || ||||||||||||||   | ||  ||||||||||||||||||    
T  44127547 ggggtcaaaactgttacagttgcaaagcttagggggcgattttgtagtttttttttcgtagagggccaaaatcgcaactt 44127626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 53255015 - 53254966
Alignment:
Q  78 gggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    ||||||||||||||||||| |||||  |||||||| ||||| ||||||||    
T  53255015 gggccaaaatcgcaacttcttgaaacatagggggccaaaactgttattaa 53254966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 46190 - 46088
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||  ||||| || ||||  |||||||||||||||||||||||||||||||||    
T  46190 gggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtttcttttcttagggggttaaaatcgcaacttcgtgaaagttagggggcgaa 46091  T
Q  116 aac 118  Q
    |||    
T  46090 aac 46088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 17071029 - 17070910
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttag 107  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| | |||||||| | ||||||  || ||||||||||||||||||||||||||||||     
T  17071029 ttggccttggggggccaaaactgctacagttgcaaaacttagggaatggttttgttgttttttttttagggggccaaaatcgcaacttcgtgaaagttaa 17070930  T
Q  108 ggggcgaaaaccgttattaa 127  Q
    ||||||||||| | ||||||    
T  17070929 ggggcgaaaactgctattaa 17070910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 17577243 - 17577362
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttcgtgaaagttag 107  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| | |||||||| | ||||||  || ||||||||||||||||||||||||||||||     
T  17577243 ttggccttggggggccaaaactgctacagttgcaaaacttagggaatggttttgttgttttttttttagggggccaaaatcgcaacttcgtgaaagttaa 17577342  T
Q  108 ggggcgaaaaccgttattaa 127  Q
    ||||||||||| | ||||||    
T  17577343 ggggcgaaaactgctattaa 17577362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 27545556 - 27545669
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||||||| | ||| |||||||||||||  ||||||||||||||| | || |||||||||||||||||||||||| ||||||||||| |||    
T  27545556 gggggccaaaactgctacaattgtaaaacttaggggatagttttgtagtttttttcttagggggccaaaatcgcaacttcgtgatagttagggggcaaaa 27545655  T
Q  117 accgttattaaacc 130  Q
    |||| |||||||||    
T  27545656 accgctattaaacc 27545669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 41487323 - 41487203
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttt--tttcatatggggccaaaatcgcaacttcgtgaaagtta 106  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||||||||  |||| || |||| ||||||||||||||||||||| ||     
T  41487323 ttggccttgggcggccaaaactgctacagttgcaaaacttagggggcggttttgtagttttgtttcttagggggtcaaaatcgcaacttcgtgaaaattc 41487224  T
Q  107 gggggcgaaaaccgttattaa 127  Q
    |||||||||||| | ||||||    
T  41487223 gggggcgaaaactgctattaa 41487203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 25144129 - 25144257
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaag 103  Q
    |||| ||||| |||||||||||||| ||| | | ||||||||||||||||  ||||||||||||||||| || ||||| ||||||||||||||||||| |    
T  25144129 aaaaattggccttggggggccaaaattgcaacaattgcaaaacttagggggtggttttgtagttttttctta-ggggctaaaatcgcaacttcgtgaatg 25144227  T
Q  104 ttagggggcgaaaaccgttattaaacctaa 133  Q
    ||||| ||||||||  | ||||||||||||    
T  25144228 ttaggaggcgaaaattgctattaaacctaa 25144257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 136
Target Start/End: Complemental strand, 39889887 - 39889766
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||| |||||||||||||| |||||||||||||| ||  || ||||||| ||||||| || ||||||||||| |||||||||||||||||| | |||||    
T  39889887 ttgggaggccaaaactgctacagttgcaaaacttatggagcgattttgtaattttttcttaaggggccaaaattgcaacttcgtgaaagttaagaggcga 39889788  T
Q  115 aaaccgttattaaacctaaaaa 136  Q
    |||| | |||||| ||||||||    
T  39889787 aaactgctattaagcctaaaaa 39889766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 33298545 - 33298635
Alignment:
Q  26 aaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||||||||  ||||||||||||||||| ||||||||||||||| |  || |||||||||||||||||||||||||||||||| |||||||||    
T  33298545 aaactgctactgttgcaaaacttagggggcggttttgtagttttct--tagggggccaaaatcgcaacttcgtgaaagttaggaggcgaaaac 33298635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 14880537 - 14880633
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    ||||||||||||| | |||||||||||||||| | ||||||||| ||||||| | || ||||||||||| |||||||||||||||||||||||||||    
T  14880537 gggccaaaactgcgacagttgcaaaacttaggaggcggttttgtggtttttttcttagggggccaaaattgcaacttcgtgaaagttagggggcgaa 14880633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 35213145 - 35213034
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||||||||||||| || |||||||||||||| ||| | |||||||||||||||  || |||| |||||||||||||| || |||||||| ||||||    
T  35213145 ttggggggccaaaactgttacagttgcaaaacttaaggggcagttttgtagtttttt-ttagggggtcaaaatcgcaactttgtcaaagttagtgggcga 35213047  T
Q  115 aaaccgttattaa 127  Q
    |||||| ||||||    
T  35213046 aaaccgctattaa 35213034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 9762398 - 9762500
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcat-atggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    |||||| ||||||| ||||| ||||||||||||||||| ||||||||||||||||||  | | |||||||||||||||||||||| ||||||||| ||||    
T  9762398 ttggggagccaaaattgctacagttgcaaaacttaggg-acggttttgtagtttttttttcaaggggccaaaatcgcaacttcgtaaaagttaggtggcg 9762496  T
Q  114 aaaa 117  Q
    ||||    
T  9762497 aaaa 9762500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 22192417 - 22192314
Alignment:
Q  16 tggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcga 114  Q
    ||||||| ||||||||||| ||||||||||| || ||| ||||||| || |||||| | || |||||||||||||||||||||||||||||| |||||||    
T  22192417 tggggggtcaaaactgctacagttgcaaaacataaggggcggttttttaatttttttcttagggggccaaaatcgcaacttcgtgaaagttaaggggcga 22192318  T
Q  115 aaac 118  Q
    ||||    
T  22192317 aaac 22192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 20853490 - 20853372
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||||| | |  |||||||||||||||  ||||||||||||||||  || |||| |||||||||||||||  |||||||||||||| ||||    
T  20853490 gggggccaaaactgccacatatgcaaaacttagggggtggttttgtagtttttttttagggggtcaaaatcgcaacttcaagaaagttagggggctaaaa 20853391  T
Q  118 ccgttattaaacctaaaaa 136  Q
    | | |||||| ||||||||    
T  20853390 ctgctattaagcctaaaaa 20853372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 26824034 - 26824126
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||  ||||||| ||  ||| |||||||||||||||||||||||||||||    
T  26824034 ggggccaaaactgctatagttgcaaaactta-gggacagttttgtagttttttttcttagagggtcaaaatcgcaacttcgtgaaagttagggg 26824126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 23702256 - 23702121
Alignment:
Q  1 actaaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttt-----ttcatatggggccaaaatcgcaactt 95  Q
    ||||||| ||||| ||||||| |||||||| ||| |||||||||||||||||| |||||||||||||||     ||| || ||| ||||||||| |||||    
T  23702256 actaaaaattggccttgggggaccaaaactactacagttgcaaaacttagggg-cggttttgtagttttttttcttcttaggggaccaaaatcgtaactt 23702158  T
Q  96 cgtgaaagttagggggcgaaaaccgttattaaaccta 132  Q
     |||||||||| ||||||||||| | |||||| ||||    
T  23702157 tgtgaaagttaaggggcgaaaactgctattaagccta 23702121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 45457079 - 45456965
Alignment:
Q  17 ggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    |||||||||||||||||| | ||| ||||||||  ||  ||||||||||||||||  |  |||  ||||||| ||||||||| |||||||||||||||||    
T  45457079 ggggggccaaaactgctacaattgtaaaacttaaagggtggttttgtagttttttttttagggatcaaaatcacaacttcgtaaaagttagggggcgaaa 45456980  T
Q  117 accgttattaaacct 131  Q
    || ||||||||||||    
T  45456979 actgttattaaacct 45456965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 6807284 - 6807185
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||| ||||||||||| ||||||||||||||||||  ||||| |||||||||| | || ||||||||||||||||||||| |||||||| ||||| ||||    
T  6807284 ggggtcaaaactgctacagttgcaaaacttagggggtggttt-gtagtttttttcttagggggccaaaatcgcaacttcgagaaagttatggggcaaaaa 6807186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 3676245 - 3676141
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaa 101  Q
    |||| ||||| || ||||||||||||||||||||||||| ||||| |||| |||||||||||||||||  | || ||| |||||||||||| ||||||||    
T  3676245 aaaaattggccttagggggccaaaactgctatagttgcataacttggggg-cggttttgtagttttttttctta-gggaccaaaatcgcaaattcgtgaa 3676148  T
Q  102 agttagg 108  Q
    |||||||    
T  3676147 agttagg 3676141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 30539191 - 30539281
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagtta 106  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||  ||||||| || ||| ||||||||||||||| | ||||||||    
T  30539191 gggggccaaaactgccacagatgcaaaacttaggggacggttttgtagttttttttcttaggggaccaaaatcgcaactttgggaaagtta 30539281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 41487410 - 41487527
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaa 115  Q
    |||||||||||| |||| |||||||||||||||||| |||||||||||||||||  | || ||| | ||||||||||||| |  |||||||| |||| ||    
T  41487410 gggggccaaaacagctacagttgcaaaacttagggggcggttttgtagttttttttcttaaggg-ctaaaatcgcaactttggaaaagttagagggctaa 41487508  T
Q  116 aaccgttattaaacctaaa 134  Q
    ||| | |||||||||||||    
T  41487509 aactgctattaaacctaaa 41487527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 29657904 - 29658018
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccg 120  Q
    ||||||||| |||| |||||||||||||| ||| | ||||||| |||||||  ||   || ||||||||||||||  |||||||||||| |||||||| |    
T  29657904 ggccaaaacggctacagttgcaaaacttaaggggcagttttgttgttttttt-tagatggtcaaaatcgcaacttgatgaaagttagggagcgaaaactg 29658002  T
Q  121 ttattaaacctaaaaa 136  Q
     |||||||||||||||    
T  29658003 ctattaaacctaaaaa 29658018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 30539116 - 30539049
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||| ||||| |||||||||||||||||||| ||||| |||||||||||| | |||||||||||||||    
T  30539116 aaaaattggccttggggggccaaaactgctacagttgtaaaacttagggggcagttttgtagtttttt 30539049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 22192502 - 22192588
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagg 108  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||||||| || |||| ||||||  |||||| |  |||||||||    
T  22192502 gccaaaacggctacagttgcaaaacttaggagacggttttgtagttttttcttaaggggtcaaaattacaactttgaaaaagttagg 22192588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 37940106 - 37940198
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    ||||||||||||| ||||||||||||| ||||||||   ||||||||| ||||| ||    ||||||||| ||||||||||||||||| ||||    
T  37940106 ggggccaaaactgttatagttgcaaaatttaggggataattttgtagtcttttcttagaaagccaaaatcacaacttcgtgaaagttaagggg 37940198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 16982712 - 16982638
Alignment:
Q  46 cttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||||||| |||||||||||||||||  | || ||| ||||||| ||||||||||||||||||||||| ||||||    
T  16982712 cttagggggcggttttgtagttttttttcttaggggaccaaaattgcaacttcgtgaaagttagggggtgaaaac 16982638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 29791223 - 29791288
Alignment:
Q  41 caaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaag 103  Q
    ||||||||||||| |||||||||||||||||   | ||||||| ||||||||||||||||||||||    
T  29791223 caaaacttagggggcggttttgtagttttttttccttatgggggcaaaatcgcaacttcgtgaaag 29791288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 37813247 - 37813165
Alignment:
Q  47 ttaggggacggttttgtagtttttt--catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    ||||||| |||||||||||||||||  | || ||||||||||||| || || |||||||||||||||||||||| | ||||||    
T  37813247 ttagggggcggttttgtagttttttttcttagggggccaaaatcgtaaatttgtgaaagttagggggcgaaaactgctattaa 37813165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 37263475 - 37263357
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-----catatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    ||||||||||||||||| ||||| |||| ||||||   | ||||||||||||||     | || || | ||||||||||||||||| ||||||| |||||    
T  37263475 gggggccaaaactgctacagttgtaaaatttagggagagattttgtagttttttttcttcttagggagtcaaaatcgcaacttcgtaaaagttaaggggc 37263376  T
Q  113 gaaaaccgttattaaacct 131  Q
    |||||| | ||||||||||    
T  37263375 gaaaactgctattaaacct 37263357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 32768452 - 32768536
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaag 103  Q
    ||||||||||| ||||| ||||||||||| || | | ||||||||||| |||||| || || | ||||||||||||||||||||||    
T  32768452 gggggccaaaaatgctacagttgcaaaacatatgaggcggttttgtag-tttttcttagggagtcaaaatcgcaacttcgtgaaag 32768536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 37813291 - 37813344
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||||||||    
T  37813291 gggggccaaaactgccacagatgcaaaacttagggggcggttttgtagtttttt 37813344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 32071236 - 32071291
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaactt 95  Q
    ||||||||||||||| |||||||||||||||||| || |||| ||||||||||||||    
T  32071236 tgcaaaacttagggggcggttttgtagttttttctta-ggggtcaaaatcgcaactt 32071291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 22846628 - 22846695
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||| ||||| |||||||||||||  ||||| | ||||||||||||||| || |||||||||||||||    
T  22846628 aaaaattggcattggggggccaaatatgctacaattgcaaaacttagggaacagttttgtagtttttt 22846695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 45177313 - 45177223
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaaagttagg 108  Q
    ||||||||||||  | || |||||||||||||||||| ||||||||||  ||||| || |||  |||||||||||||| | ||||||||||    
T  45177313 gggccaaaactgtcacagatgcaaaacttaggggacgattttgtagttttttttcttaggggatcaaaatcgcaactttgagaaagttagg 45177223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 45177394 - 45177461
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||| ||||||||||| |||||||||| ||| |||||||||||||| ||| | |||||||| ||||||    
T  45177394 aaaaattggctttgggaggccaaaactactacagttgcaaaacttatggggcagttttgtaatttttt 45177461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 18093023 - 18092914
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||||| | ||   ||||||||||| | ||||||||||||||||| | || | |||||||||||||||||| || || ||||||||| |||    
T  18093023 gggggccaaaactgccacagggtcaaaacttaggtg-cggttttgtagtttttttcttacgaggccaaaatcgcaacttcttgtaacttagggggctaaa 18092925  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  18092924 actgctattaa 18092914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 20228338 - 20228234
Alignment:
Q  24 caaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgt 121  Q
    |||||||| || ||||||||||||||||   | |||||||||  ||||||  || |||| ||||||||||||||||| ||||||||| | ||||||| ||    
T  20228338 caaaactgttacagttgcaaaacttaggaagctgttttgtagcattttttttta-ggggtcaaaatcgcaacttcgtaaaagttaggagacgaaaactgt 20228240  T
Q  122 tattaa 127  Q
    ||||||    
T  20228239 tattaa 20228234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 20853579 - 20853633
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttc 72  Q
    ||||||||||| ||||| |||| ||||||||| |||||||||||||| |||||||    
T  20853579 gggggccaaaattgctacagttacaaaacttaagggacggttttgtatttttttc 20853633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 28349535 - 28349609
Alignment:
Q  45 acttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    ||||||||  |||||||||| |||||| | || ||||||||||||||||||| | |||||||||||||| |||||    
T  28349535 acttagggagcggttttgtaatttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaac 28349609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 29657822 - 29657764
Alignment:
Q  13 ctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||||||||| | |  ||||||| ||||||| |||||||||||||||||    
T  29657822 ctttggggggccaaaactgccacatatgcaaaatttagggggcggttttgtagtttttt 29657764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 23702356 - 23702445
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt-catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaa 127  Q
    |||||||||||||||||  ||||||| |||||| | || ||||| |||||||||||||   |||||||||||||| ||||| | ||||||    
T  23702356 tgcaaaacttaggggacaattttgtaatttttttcttagggggctaaaatcgcaacttttggaaagttagggggctaaaactgctattaa 23702445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 37940021 - 37939949
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaactt 95  Q
    ||||||||||| | |  |||||||||||||||  ||||||||||||||||  || |||||||||||||||||||    
T  37940021 gccaaaactgccacatatgcaaaacttagggggtggttttgtagtttttt-ttaaggggccaaaatcgcaactt 37939949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 42218466 - 42218523
Alignment:
Q  40 gcaaaacttaggggacggttttgtag-ttttttcatatggggccaaaatcgcaacttc 96  Q
    |||||||||||||||||||||||||| ||||||| ||| | | |||||||||||||||    
T  42218466 gcaaaacttaggggacggttttgtagtttttttcttatagtgtcaaaatcgcaacttc 42218523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 9498965 - 9498905
Alignment:
Q  74 tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaa 134  Q
    ||||||| ||||||||||||||| ||| | ||||||||| ||||| |||||||| ||||||    
T  9498965 tatggggtcaaaatcgcaacttcctgatacttagggggccaaaactgttattaagcctaaa 9498905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 41602833 - 41602928
Alignment:
Q  40 gcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaa 133  Q
    |||||||||| ||| |||||||||||  ||||||| || | ||| |||||||||||||  ||||| ||||||||| ||||| | |||||| |||||    
T  41602833 gcaaaacttaaggggcggttttgtagttttttttcttaggaggctaaaatcgcaactttttgaaacttagggggctaaaactgctattaagcctaa 41602928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 521647 - 521753
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggcc-aaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    |||||||| ||||| |  ||||||||||| ||| |||||||||| ||||||  |  |||| | |||||||||||||||||||| |||||||| ||||||     
T  521647 ggccaaaattgctacaagtgcaaaacttatggg-cggttttgtaatttttttctcaggggtctaaaatcgcaacttcgtgaaaattagggggtgaaaact 521745  T
Q  120 gttattaa 127  Q
    | ||||||    
T  521746 gctattaa 521753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 1003772 - 1003869
Alignment:
Q  45 acttaggggacggttttgtagttttttca--tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaacctaaaaagttta 141  Q
    |||||||||||| ||||||||||| || |  || || |||||||| |||||||| |||||  |||||||| ||||| |||||||| |||||||| ||||    
T  1003772 acttaggggacgattttgtagtttatttagttagggagccaaaattgcaacttcttgaaacatagggggc-aaaactgttattaagcctaaaaaattta 1003869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 21486857 - 21486904
Alignment:
Q  24 caaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||| |||||||||||||||| | | |||||||||||||||    
T  21486857 caaaactgctacagttgcaaaacttaggaggcagttttgtagtttttt 21486904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 22846555 - 22846504
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||| | || ||||||||||| |||||| ||||||||||||||    
T  22846555 gggccaaaactgccaaagatgcaaaacttatgggacgattttgtagtttttt 22846504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 25897073 - 25896991
Alignment:
Q  49 aggggacggttttgtagttttttca--tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaac 129  Q
    ||||| |||||||||||||||||    || ||||||||||||||||||| |  ||||||||||||| ||||| | ||||||||    
T  25897073 agggggcggttttgtagttttttttgttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaaac 25896991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 27545453 - 27545340
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||||||||||||| |||| ||||||||||| ||| || ||||||||||||||  || |||| | |||||||||||| |  ||||||||  ||| |||||    
T  27545453 ggggccaaaactgccatagatgcaaaactta-gggtcgattttgtagtttttt-ttagggggtcgaaatcgcaactttggaaaagttagacggctaaaac 27545356  T
Q  119 cgttattaaacctaaa 134  Q
     | |||||| ||||||    
T  27545355 tgctattaagcctaaa 27545340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 45163687 - 45163761
Alignment:
Q  45 acttaggggacggttttgtagttttttca--tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||| |||||||||||||| || |  || |||||||||||||||||||| |||||  |||||||| ||||    
T  45163687 acttagggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaa 45163761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 29044747 - 29044856
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgta-gttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    ||||||||||||||| | |  ||||||||||| ||||| |||||||| |||||||| || ||| ||||||||| |||||   | |||||||||||| |||    
T  29044747 gggggccaaaactgccacaaatgcaaaacttatgggacagttttgtaggttttttctta-gggaccaaaatcgtaactttagggaagttagggggctaaa 29044845  T
Q  117 accgttattaa 127  Q
    || | ||||||    
T  29044846 actgctattaa 29044856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 44269232 - 44269182
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||| ||| ||||||||||||||||||  | ||||||||||||||    
T  44269232 ggccaaaactactacagttgcaaaacttagggggtgattttgtagtttttt 44269182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 3676328 - 3676381
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||| |||||||||| | || |||||||||||| || |||||||||||||||||    
T  3676328 ggggaccaaaactgccacagatgcaaaacttagtgggcggttttgtagtttttt 3676381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 17512213 - 17512109
Alignment:
Q  16 tggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttca--tatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    ||||||||||||||||| | |    ||| ||||||||| || ||||||||||| || |  || |||||||||||||||||||| |||||  ||||||||     
T  17512213 tggggggccaaaactgcaaaaaagtcaatacttagggggcgtttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaatatagggggcc 17512114  T
Q  114 aaaac 118  Q
    |||||    
T  17512113 aaaac 17512109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 37263559 - 37263627
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagg 108  Q
    ||||||||||||||| |||||||||||||||||| ||  ||  ||||||||||||||   ||||||||||    
T  37263559 tgcaaaacttagggg-cggttttgtagttttttcttagtggatcaaaatcgcaacttttggaaagttagg 37263627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 38612283 - 38612238
Alignment:
Q  66 ttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||| ||| ||||||||||||||||| | |||||||||||||||    
T  38612283 ttttttaatagggggccaaaatcgcaacattgtgaaagttaggggg 38612238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 38613411 - 38613456
Alignment:
Q  66 ttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||| ||| ||||||||||||||||| | |||||||||||||||    
T  38613411 ttttttaatagggggccaaaatcgcaacattgtgaaagttaggggg 38613456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 16982831 - 16982863
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| |||||||||||||||||    
T  16982831 tgcaaaacttagggggcggttttgtagtttttt 16982863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 17071842 - 17071913
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    ||||||||||||||| |||||||||||||||||  |  |||| |||||| |||| || | |||||||||||||    
T  17071842 tgcaaaacttagggg-cggttttgtagtttttttcttaggggtcaaaattgcaattttgggaaagttaggggg 17071913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 17576431 - 17576360
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    ||||||||||||||| |||||||||||||||||  |  |||| |||||| |||| || | |||||||||||||    
T  17576431 tgcaaaacttagggg-cggttttgtagtttttttcttaggggtcaaaattgcaattttgggaaagttaggggg 17576360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 44101406 - 44101350
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||| |||||||||||||| |||||||||||||| ||||   |||| |||||||||    
T  44101406 ttgggaggccaaaactgctaaagttgcaaaacttaagggataattttatagtttttt 44101350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 19156 - 19052
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcg 113  Q
    ||||| ||||||| ||||||  ||||||||||||||||||||||||||||||| ||||| || || ||| ||||| ||||||||||||||||| ||||||    
T  19156 ttgggaggccaaatctgctacggttgcaaaacttaggggacggttttgtagtttttttcttagggagccgaaatcacaacttcgtgaaagttaaggggcg 19057  T
Q  114 aaaac 118  Q
    |||||    
T  19056 aaaac 19052  T

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Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 19229 - 19282
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||| | | |  ||||||||||||||| |||||||||||||||||    
T  19229 gggggccaaaactaccacatgtgcaaaacttagggggcggttttgtagtttttt 19282  T

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Target: scaffold0417 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 9534 - 9653
Alignment:
Q  16 tggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    |||||||| |||||||||| |||||||||||||||||| || ||| ||||||||||   | || |||  ||||||||||||||||||||||||||| ||     
T  9534 tggggggctaaaactgctacagttgcaaaacttagggggcgatttggtagtttttttttcttaggggatcaaaatcgcaacttcgtgaaagttaggaggt 9633  T
Q  113 gaaaaccgttattaaaccta 132  Q
    |||||| | |||||||||||    
T  9634 gaaaactgctattaaaccta 9653  T

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Target: scaffold0372 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 309 - 401
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttag 107  Q
    ||||||||||||| |||||| ||||| ||||||||||| |||||||| |||||||||| || |||||||||| |||||||| | |||||||||    
T  309 ttggggggccaaagctgctacagttgtaaaacttagggaacggttttatagttttttcttagggggccaaaagcgcaactttgggaaagttag 401  T

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Target: scaffold0372; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 234 - 118
Alignment:
Q  21 ggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttt-tcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    |||||||||||| | |  ||||||| ||||| |||| ||||||||||||| ||  | || || ||||||||||||| | |||||||||| ||| |||||     
T  234 ggccaaaactgccacaagtgcaaaatttaggagacgtttttgtagtttttatctcagggagcaaaaatcgcaactttgagaaagttaggaggctaaaact 135  T
Q  120 gttattaaacctaaaaa 136  Q
    | |||||| ||| ||||    
T  134 gctattaagccttaaaa 118  T

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Target: scaffold0328 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 9607 - 9733
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaag 103  Q
    |||| ||||| || |||| ||| ||| |||| |||||||||||||| ||| |||||||||||||||||  |||||||||| |||| ||||||||||||||    
T  9607 aaaaattggccttcggggaccagaaccgctacagttgcaaaacttaaggggcggttttgtagtttttt-ttatggggccagaatcacaacttcgtgaaag 9705  T
Q  104 ttagggggcgaaaaccgttattaaacctaa 133  Q
    |||  |||||||||| | |||||| |||||    
T  9706 tta--gggcgaaaacggctattaagcctaa 9733  T

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Target: scaffold0328; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 9525 - 9414
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt-ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaa 116  Q
    |||||| |||||||| | |  ||||||||||||||||||||||||||||| ||||| ||  |||| |||||| |||||| | |||| ||||||||| |||    
T  9525 gggggctaaaactgccacatatgcaaaacttaggggacggttttgtagtttttttcttagagggcaaaaatcacaactttgggaaaattagggggctaaa 9426  T
Q  117 accgttattaaa 128  Q
    || | |||||||    
T  9425 actgctattaaa 9414  T

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Target: scaffold0248 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 606 - 712
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtgaaagttaggggg 111  Q
    |||||||||  ||||||||| | |||||||||||| ||| |||||||||||   ||||||| || |||||||||||||||||||||| ||||||||| |     
T  606 ttggggggcataaactgctagaattgcaaaacttaaggggcggttttgtagtttttttttcttagggggccaaaatcgcaacttcgtaaaagttaggaga 705  T
Q  112 cgaaaac 118  Q
    |||||||    
T  706 cgaaaac 712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 517 - 420
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt---catatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    ||||||||||||||| | |  || ||||||||||||  ||||||||||||||||   | || ||||||||||||||||||| | | ||||||||||||    
T  517 gggggccaaaactgccacatatgtaaaacttagggggtggttttgtagtttttttttcttagggggccaaaatcgcaactttgaggaagttagggggc 420  T

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Target: scaffold0137 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 20121 - 20219
Alignment:
Q  19 ggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    |||||||||||| ||| | |||||||| |||||||||| ||||||||||||||  || | | |||||||| ||||||||| ||| ||||||||||||||    
T  20121 ggggccaaaactactacaattgcaaaatttaggggacgattttgtagtttttttttaggtgaccaaaatcacaacttcgtaaaaattagggggcgaaaa 20219  T

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Target: scaffold0137; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 20035 - 19974
Alignment:
Q  9 ttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||| |||||||||| | || |||||||||||| ||||| ||||||||||||||    
T  20035 ttggctttggggg-ccaaaactgccacagatgcaaaacttagtggacgattttgtagtttttt 19974  T

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Target: scaffold0041 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 93988 - 94082
Alignment:
Q  4 aaaagttggctttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaacttc 96  Q
    |||| ||||| |||| ||||| ||||||||| |||| ||||||||| |||||||||||||||  ||||||| || |||| |||||||||||||||    
T  93988 aaaaattggcattggagggcctaaactgctacagttacaaaacttatgggacggttttgtagttttttttcttagggggtcaaaatcgcaacttc 94082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 93914 - 93882
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||||||||||||||||||||||||||||||||    
T  93914 tgcaaaacttaggggacggttttgtagtttttt 93882  T

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Target: scaffold0015 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 77063 - 77140
Alignment:
Q  20 gggccaaaactgctatagttgcaaaacttaggggacggttttgtag--ttttttcatatggggccaaaatcgcaactt 95  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||||  ||||||| || |||||||||| ||||||||    
T  77063 gggccaaaactgctacagttgtaaaacttaggggacgattttgtagttttttttcttagggggccaaaaccgcaactt 77140  T

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Target: scaffold0809 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 136
Target Start/End: Complemental strand, 2869 - 2746
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaaagttagggggc 112  Q
    |||||| ||||||||||||| ||||| |||| ||||||| | |||||||||||  ||||| ||  |  | ||||||| || ||||| |||||||||| ||    
T  2869 ttggggagccaaaactgctacagttgtaaaatttagggggcagttttgtagttttttttcttagagaactaaaatcgtaaattcgtaaaagttagggtgc 2770  T
Q  113 gaaaaccgttattaaacctaaaaa 136  Q
    |||||| |||||||| ||||||||    
T  2769 gaaaactgttattaagcctaaaaa 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 9664 - 9567
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 117  Q
    ||||||||||||| ||| |||||||||||||| ||| || |||||||||||||   || |||||||||||| |||||| |  ||||||| ||||| ||||    
T  9664 gggggccaaaactactacagttgcaaaacttaaggggcgattttgtagttttt---tagggggccaaaatcacaactttggaaaagttaaggggctaaaa 9568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 24985 - 24905
Alignment:
Q  43 aaacttaggggacggttttgtagtttttt-----catatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaac 118  Q
    |||||||||  ||||||||||||||||||     |||||||| ||||||||| |||||||| ||||||||||| |||||||    
T  24985 aaacttaggaaacggttttgtagttttttttcttcatatgggaccaaaatcgtaacttcgtaaaagttaggggacgaaaac 24905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 25120 - 25152
Alignment:
Q  39 tgcaaaacttaggggacggttttgtagtttttt 71  Q
    ||||||||||||||| |||||||||||||||||    
T  25120 tgcaaaacttagggggcggttttgtagtttttt 25152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 21861 - 21976
Alignment:
Q  22 gccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttca--tatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaacc 119  Q
    |||||||||  || ||||| |||||||| || ||||||||||| |||||| |  || |||||||||||||||||  | | ||||||||||| |||||||     
T  21861 gccaaaactaatacagttgtaaaacttatggaacggttttgtaatttttttacttaaggggccaaaatcgcaacagcataaaagttaggggacgaaaact 21960  T
Q  120 gttattaaacctaaaa 135  Q
    | |||||| |||||||    
T  21961 gctattaagcctaaaa 21976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 4220 - 4264
Alignment:
Q  24 caaaactgctatagttgcaaaacttaggggacggttttgtagttt 68  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||    
T  4220 caaaactgctacagttgcaaaacttagggggcggttttgtagttt 4264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 145555 - 145623
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagttttttcatatggggccaaaa 86  Q
    ||||| ||||||||||| | |||||||||||||||  | |||||||||||||||| || ||||||||||    
T  145555 gggggacaaaactgctacaattgcaaaacttagggagcagttttgtagttttttcttagggggccaaaa 145623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 145467 - 145373
Alignment:
Q  18 gggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtt--ttttcatatggggccaaaatcgcaacttcgtgaaagttagggg 110  Q
    ||||||||||||||| | || ||||||| ||| ||| ||| |||||||||  ||||| || |||| |||||||||||||| | ||||||||||||    
T  145467 gggggccaaaactgccacagatgcaaaatttaaggggcggctttgtagttttttttcttaggggggcaaaatcgcaactttgagaaagttagggg 145373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1458 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 1535 - 1469
Alignment:
Q  66 ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaaccta 132  Q
    ||||||| || |||||||||||| |||||| |||||||||||||||| ||||| | |||||| ||||    
T  1535 ttttttcttagggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagccta 1469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 3703 - 3637
Alignment:
Q  66 ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaaccta 132  Q
    ||||||| || ||||||||||||||||||| | |||||||||||||| ||||| | |||||| ||||    
T  3703 ttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 3703 - 3637
Alignment:
Q  66 ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgttattaaaccta 132  Q
    ||||||| || ||||||||||||||||||| | |||||||||||||| ||||| | |||||| ||||    
T  3703 ttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 203305 - 203249
Alignment:
Q  15 ttggggggccaaaactgctatagttgcaaaacttaggggacggttttgtagtttttt 71  Q
    |||| ||||||||||| ||| |||||||||| ||||| | |||||||||||||||||    
T  203305 ttggagggccaaaacttctacagttgcaaaatttaggaggcggttttgtagtttttt 203249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 3680 - 3575
Alignment:
Q  25 aaaactgctatagttgcaaaacttaggggacggttttgtag---ttttttcatatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaaccgt 121  Q
    |||||||||| |||||| ||| ||||||||||||||| |||   ||||||  ||   ||||||||||| ||||| |||||||||||  ||||||||| |     
T  3680 aaaactgctacagttgcgaaatttaggggacggttttatagttttttttttctagtaggccaaaatcgtaactttgtgaaagttagaaggcgaaaactgc 3581  T
Q  122 tattaa 127  Q
    ||||||    
T  3580 tattaa 3575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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