View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18682_high_14 (Length: 317)
Name: NF18682_high_14
Description: NF18682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18682_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 1995970 - 1995658
Alignment:
| Q |
1 |
ctaaatatttaaggatactctacagacacaatatgagctaaaaatc----ctaacttcgatggatttctttaaagaaatgttaaaactcacgtgattttc |
96 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||| |
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| T |
1995970 |
ctaaatatttaaggatactctacagacacaatatgagctaaaatccttaactaacttcgattgatttctttaaagaaatgttaaaactcacatgattttc |
1995871 |
T |
|
| Q |
97 |
tacattaatatgttattgtactcacgcgatttcaatcgtctattcttaatcatacaattcatattatgagtttacatatcataaatctaaacatacaagt |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1995870 |
tacattaatatgttattgtactcacgcgatttcaatcgtctattcttaatcatacaattcatattatgagtttacatatcataaatctaaacatacaagt |
1995771 |
T |
|
| Q |
197 |
taaaatatacacaatcatatcatatcaaaattgaatggttcatatcaacaccaa---tataaatgcacaattgcacataatttatttcctcaaagtcatg |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1995770 |
caaaatatacacaatcatatcatatcaaaattgaatggttcatatcaacaccaatattataaatgcacaattgcacataatttatttcctcaaagtcatg |
1995671 |
T |
|
| Q |
294 |
gtctcccaccttt |
306 |
Q |
| |
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||||||||||||| |
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|
| T |
1995670 |
gtctcccaccttt |
1995658 |
T |
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