View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18683_high_56 (Length: 233)
Name: NF18683_high_56
Description: NF18683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18683_high_56 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 476252 - 476457
Alignment:
| Q |
14 |
caaaggaaaatttcaagatgattttgagatcaaggactttggatttttaaaattcttcctaggaacagaaactgtacattcagaacaagatatcactttg |
113 |
Q |
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| T |
476252 |
caaaggaaaatttcaagatgattttgagatcaaggactttggatttttaaaattcttcctaggaacagaaactgtacattcagaacaagatatcactttg |
476351 |
T |
|
| Q |
114 |
tgtcaaagacagtattttctatatttattaactaagacaaataacttggtcttcaagccatccagttttcccaatagatcctattcaaggattacacaat |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
476352 |
tgtcaaagacagtattttctatatttattaactaagacaaataacttggtcttcaagccatccagttttcccaatagatcctattcaaggattacacaat |
476451 |
T |
|
| Q |
214 |
gatgat |
219 |
Q |
| |
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|||||| |
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| T |
476452 |
gatgat |
476457 |
T |
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