View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18683_high_60 (Length: 221)
Name: NF18683_high_60
Description: NF18683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18683_high_60 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 41331714 - 41331511
Alignment:
| Q |
14 |
acatgatattagtgggcatgacctcacaatttggattccacacattatgtgtgatgtatcaatccatgttggttatttgatttcaaattaataatataaa |
113 |
Q |
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| T |
41331714 |
acatgatattagtgggcatgacctcacaatttggattccacacattatgtgtgatgtatcaatccatcttggtcatttgatttcaaattaataatataaa |
41331615 |
T |
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| Q |
114 |
ttaattaaaagtgtgttgattaagatgcaacgggagtcgattgattttaaattaatggctgagatcaattagtaggtgcaaatacttgcattaattaaag |
213 |
Q |
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| T |
41331614 |
ttaattaaaagtgagttgattaagacgcaacgggaatcgattgattttaaattaatggctgagatcaattagtaagtgcaaatacttgcattaattaaag |
41331515 |
T |
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| Q |
214 |
caga |
217 |
Q |
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|||| |
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| T |
41331514 |
caga |
41331511 |
T |
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