View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18684_high_35 (Length: 238)
Name: NF18684_high_35
Description: NF18684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18684_high_35 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 25193302 - 25193523
Alignment:
| Q |
1 |
ttgaatcaacacattttaaaatacttcaattttcaagtgggggaattgtaaccctgtttatactaaaatggaaaagattcgtttggagaaagaacttcta |
100 |
Q |
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| T |
25193302 |
ttgaatcaccacattttaaaatacttcaattttcaagtgggggaattgtaaccctgtttatactaaaatggaaaagattcgtttggagaaagaacttcta |
25193401 |
T |
|
| Q |
101 |
ttggttactatctttggaaccatgtcatagaattataaggcagccatatgaagtgtgtaaatgttttcatatgggaatcaacatttgaaattgcatgaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
25193402 |
ttggttactatctttggaaccatgtcatagaattataaggcagccatatgaagtgtgtaaatgttttcatatgggaatcaacatttgaaattgcataaaa |
25193501 |
T |
|
| Q |
201 |
agaggaattattactcgaatct |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
25193502 |
agaggaattattactcgaatct |
25193523 |
T |
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