View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18685_high_3 (Length: 391)

Name: NF18685_high_3
Description: NF18685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18685_high_3
NF18685_high_3
[»] chr7 (12 HSPs)
chr7 (187-391)||(25295948-25296146)
chr7 (13-98)||(35315235-35315321)
chr7 (13-98)||(4167468-4167554)
chr7 (13-98)||(10257401-10257485)
chr7 (17-98)||(132016-132098)
chr7 (42-98)||(4168891-4168948)
chr7 (13-97)||(10256141-10256226)
chr7 (42-98)||(12631877-12631932)
chr7 (13-103)||(27899227-27899318)
chr7 (13-97)||(24873610-24873695)
chr7 (15-64)||(28326405-28326454)
chr7 (42-97)||(29409280-29409336)
[»] chr5 (15 HSPs)
chr5 (13-102)||(12862931-12863021)
chr5 (28-98)||(8188228-8188299)
chr5 (13-98)||(12830951-12831037)
chr5 (13-98)||(22819562-22819648)
chr5 (13-98)||(42510131-42510217)
chr5 (13-97)||(32734150-32734234)
chr5 (13-117)||(42511679-42511784)
chr5 (62-98)||(7427987-7428023)
chr5 (55-117)||(29221188-29221250)
chr5 (28-98)||(224618-224689)
chr5 (13-98)||(27894036-27894122)
chr5 (57-98)||(8187183-8187224)
chr5 (28-96)||(30253605-30253674)
chr5 (13-101)||(40058032-40058121)
chr5 (42-117)||(11907203-11907279)
[»] chr6 (10 HSPs)
chr6 (13-117)||(14328787-14328891)
chr6 (13-117)||(14421797-14421901)
chr6 (55-102)||(16269823-16269871)
chr6 (15-98)||(14326170-14326254)
chr6 (15-98)||(14419180-14419264)
chr6 (57-117)||(1692072-1692133)
chr6 (42-98)||(13800048-13800105)
chr6 (42-98)||(27107198-27107255)
chr6 (42-98)||(27149004-27149061)
chr6 (56-103)||(16251632-16251680)
[»] chr3 (17 HSPs)
chr3 (13-117)||(35173145-35173250)
chr3 (20-98)||(43346467-43346546)
chr3 (13-98)||(21127942-21128028)
chr3 (42-98)||(12062426-12062483)
chr3 (15-98)||(23561140-23561224)
chr3 (13-98)||(23559836-23559922)
chr3 (43-117)||(12060657-12060731)
chr3 (42-98)||(7921685-7921742)
chr3 (29-101)||(48866155-48866228)
chr3 (42-117)||(50150719-50150795)
chr3 (13-98)||(35174395-35174481)
chr3 (13-98)||(38639035-38639121)
chr3 (13-66)||(11220671-11220724)
chr3 (13-70)||(47808119-47808176)
chr3 (42-98)||(48867472-48867529)
chr3 (17-97)||(47766968-47767048)
chr3 (13-69)||(54653979-54654035)
[»] chr8 (13 HSPs)
chr8 (13-101)||(20308619-20308708)
chr8 (13-101)||(21095252-21095341)
chr8 (13-117)||(8095345-8095449)
chr8 (13-98)||(41522701-41522787)
chr8 (13-117)||(8096558-8096663)
chr8 (42-98)||(34616146-34616203)
chr8 (28-98)||(22621162-22621233)
chr8 (42-98)||(22619912-22619969)
chr8 (42-98)||(41521334-41521391)
chr8 (13-98)||(13367063-13367149)
chr8 (57-98)||(22914247-22914289)
chr8 (12-101)||(39220693-39220783)
chr8 (42-97)||(35463031-35463087)
[»] chr1 (17 HSPs)
chr1 (13-117)||(36511344-36511449)
chr1 (13-117)||(51726857-51726962)
chr1 (13-98)||(14764246-14764332)
chr1 (28-117)||(24516332-24516422)
chr1 (17-102)||(26801956-26802042)
chr1 (28-98)||(40110680-40110751)
chr1 (13-98)||(36509828-36509914)
chr1 (13-98)||(40812624-40812710)
chr1 (13-117)||(14169617-14169722)
chr1 (15-94)||(19466220-19466300)
chr1 (44-98)||(26803260-26803315)
chr1 (42-98)||(40109378-40109435)
chr1 (42-97)||(14765136-14765192)
chr1 (13-96)||(19464619-19464703)
chr1 (44-98)||(40811212-40811267)
chr1 (17-98)||(38283756-38283838)
chr1 (18-98)||(8092615-8092696)
[»] chr4 (15 HSPs)
chr4 (13-102)||(17319055-17319145)
chr4 (13-98)||(50531769-50531855)
chr4 (41-97)||(44159103-44159160)
chr4 (13-98)||(38419030-38419116)
chr4 (13-101)||(34438420-34438509)
chr4 (14-97)||(38417571-38417655)
chr4 (28-97)||(41348257-41348327)
chr4 (13-98)||(50530520-50530606)
chr4 (44-98)||(41349569-41349624)
chr4 (13-98)||(6139014-6139100)
chr4 (13-98)||(26393140-26393226)
chr4 (14-103)||(10403431-10403520)
chr4 (13-117)||(34439673-34439778)
chr4 (42-98)||(43419417-43419474)
chr4 (42-117)||(43708834-43708910)
[»] chr2 (7 HSPs)
chr2 (29-117)||(7983724-7983812)
chr2 (14-97)||(3533640-3533724)
chr2 (13-98)||(3532211-3532297)
chr2 (13-97)||(14510522-14510607)
chr2 (42-98)||(15850129-15850186)
chr2 (42-97)||(7982330-7982386)
chr2 (13-98)||(25570883-25570969)
[»] scaffold0098 (2 HSPs)
scaffold0098 (13-98)||(42359-42445)
scaffold0098 (55-118)||(40913-40977)
[»] scaffold0122 (1 HSPs)
scaffold0122 (45-97)||(17205-17258)


Alignment Details
Target: chr7 (Bit Score: 163; Significance: 6e-87; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 187 - 391
Target Start/End: Original strand, 25295948 - 25296146
Alignment:
Q  187 tatctagtgtccaagggtagt--taccattttccaaataaaaaatagtaacaacggtttggtcgagtatgttcaaatatcgacaataaatttgcatcgga 284  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25295948 tatctagtgtccaagggtagtgttaccattttccaaataaaaaatagtaacaacggtttggtcgagtatgttcaaatatcgacaataaatttgcatcgga 25296047  T
Q  285 ttgacccgagtgtacccgtaacaacccacaatattcacccaaactacttgtgatgcatttttgtctaaaatgaatgtgtaaatttacatcggattggtcg 384  Q
    |||||||||        ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25296048 ttgacccga--------gtaacaacccacaatattcacccaaactacttgtgatgcatttttatctaaaatgaatgtgtaaatttacatcggattggtcg 25296139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 35315235 - 35315321
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||| |||||||||| ||||||||||   |||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||||    
T  35315235 aaaacagtaaacgacagaagacttatgggaccaaattgacatacttaataattaagggatcaaactgagaaaataaaataagttaag 35315321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 4167554 - 4167468
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    |||| |||||||||| |||||||||||  | |||||||| | ||||||||||||| |||| ||||||| ||||||||||||||||||    
T  4167554 aaaacagtaaacgacagaagacttataggatcaaattgacacacttaatagttaagggattaaactgagaaaataaaataagttaag 4167468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 10257401 - 10257485
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||||||||  |||| ||||   |||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||    
T  10257401 aaaatagtaaacgac--aagagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaag 10257485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 132016 - 132098
Alignment:
Q  17 tagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||  |||||||||||   ||||||| || | ||||||||||||||| | |||||||| ||||||||||||||||||    
T  132016 tagtaaacggaggaagacttatgggaccaaatcgacacacttaatagttaagggaccaaactgagaaaataaaataagttaag 132098  T

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Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 4168891 - 4168948
Alignment:
Q  42 accaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||| | |||| |||||||||| |||||||||| ||||||||||||||||||    
T  4168891 accaaattgacacactttatagttaagggatcaaactgagaaaataaaataagttaag 4168948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 10256226 - 10256141
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaa 97  Q
    |||||| |||||||  ||||| |||| | ||||  |||||| ||||||||||||||| | |||||||| |||||||||||||||||    
T  10256226 aaaatactaaacgatagaagagttatgagaccattttgagacacttaatagttaagggaccaaactgagaaaataaaataagttaa 10256141  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 12631877 - 12631932
Alignment:
Q  42 accaaattgagatacttaatagttaaggatcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||||| |||| ||||||||||| | ||||| |||||||||||||||||||    
T  12631877 accaaattgagacactttatagttaaggacccaactg-aaaaataaaataagttaag 12631932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 27899227 - 27899318
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaagagact 103  Q
    |||||||||||||||  |||| ||||   | |||||||||||| || |||||||| ||| |||||| | |||||||||||||||||| ||||    
T  27899227 aaaatagtaaacgacaaaagatttatgggatcaaattgagatattttatagttaaaggaccaaactaagaaaataaaataagttaagggact 27899318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 24873610 - 24873695
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaa 97  Q
    ||||| ||||||| | ||||||||||   |||||||||||| |||| ||||||| || |||||| |||||| | ||||||||||||    
T  24873610 aaaatggtaaacggcagaagacttatgggaccaaattgagacactttatagttagggcatcaaaatgaaaacaaaaaataagttaa 24873695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 28326405 - 28326454
Alignment:
Q  15 aatagtaaacgacggaagacttataaaaccaaattgagatacttaatagt 64  Q
    |||||||||||  |||||||||||| ||||||||||||| |||| |||||    
T  28326405 aatagtaaacggaggaagacttatagaaccaaattgagacactttatagt 28326454  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 29409280 - 29409336
Alignment:
Q  42 accaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaa 97  Q
    ||||| |||||| | || |||||||||| |||||||||| |||||||||||||||||    
T  29409280 accaatttgagacattttatagttaagggatcaaactgagaaaataaaataagttaa 29409336  T

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Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 12862931 - 12863021
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaagagac 102  Q
    ||||||||||||  | ||||| |||||  |||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  12862931 aaaatagtaaacagcagaagagttataggaccaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaagagac 12863021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 8188228 - 8188299
Alignment:
Q  28 ggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||  |||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||    
T  8188228 ggaagacttataggaccaaattgacacacttaatagttaaaggatcaaactgaaaaaataaaataagttaag 8188299  T

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Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 12830951 - 12831037
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||  | ||||| |||||  |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  12830951 aaaatagtaaacagcagaagagttataggaccaaattgagacacttaatagttaagggatcaaactgagaaaataaaataagttaag 12831037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 22819562 - 22819648
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||| | ||||| ||||   |||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||    
T  22819562 aaaatagtaaacggcagaagagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaag 22819648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 42510217 - 42510131
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||| | ||||| ||||   |||||||||||| |||| |||||||| ||| ||||||||||||||||||||| |||||    
T  42510217 aaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaagggaccaaactgaaaaaataaaataaattaag 42510131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 32734234 - 32734150
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaa 97  Q
    ||||||||||||||| ||||| ||||   |||||||| ||| ||| ||||||||||| | ||||||||||||||||||||||||||    
T  32734234 aaaatagtaaacgacagaagagttatgggaccaaattaagacact-aatagttaagggaccaaactgaaaaaataaaataagttaa 32734150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 42511679 - 42511784
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaagagactcggggatc 111  Q
    ||||||| ||||| | ||||| ||||  || |||||||||| |||| |||||||||| | ||||||||||||||||||||| ||||| |||| ||| ||     
T  42511679 aaaataggaaacggcagaagatttatggaagcaaattgagacactttatagttaagggaccaaactgaaaaaataaaataaattaagggactagggaatg 42511778  T
Q  112 tattaa 117  Q
    ||||||    
T  42511779 tattaa 42511784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 7427987 - 7428023
Alignment:
Q  62 agttaaggatcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||||||||||||||||||||||||||||||    
T  7427987 agttaaggatcaaactgaaaaaataaaataagttaag 7428023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 29221250 - 29221188
Alignment:
Q  55 acttaatagttaaggatcaaactgaaaaaataaaataagttaagagactcggggatctattaa 117  Q
    |||||||||||||| | |||||||| ||| ||||||||||||| ||||| |||||| ||||||    
T  29221250 acttaatagttaagaaccaaactgagaaattaaaataagttaaaagactgggggatgtattaa 29221188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 224618 - 224689
Alignment:
Q  28 ggaagacttataaaaccaaattgagatacttaatagtta-aggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||| | |||||||||||| |||| |||||||  ||| |||| |||||| |||||||||||||||    
T  224618 ggaagacttatgagaccaaattgagacactttatagttaggggaccaaaatgaaaacataaaataagttaag 224689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 27894036 - 27894122
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagtta-aggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||||||||| | |||| | |||||||||| | |||| |||||||  ||| |||| |||||| | |||||||||||||    
T  27894036 aaaatagtaaacgacggaaaatttatgagaccaaattgaaacactttatagttaggggaccaaagtgaaaacaaaaaataagttaag 27894122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 8187224 - 8187183
Alignment:
Q  57 ttaatagttaaggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||||| ||||||| |||||||||||| |||||    
T  8187224 ttaatagttaaggattaaactgagaaaataaaataaattaag 8187183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 30253674 - 30253605
Alignment:
Q  28 ggaagacttataaaaccaaattgagatacttaatagtt-aaggatcaaactgaaaaaataaaataagtta 96  Q
    ||||||||||| | |||||||||| | ||||||||||| | ||| || ||||||||||||||| ||||||    
T  30253674 ggaagacttatgagaccaaattgacacacttaatagttgagggaccacactgaaaaaataaaacaagtta 30253605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 40058121 - 40058032
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaagaga 101  Q
    ||||| ||||||| | ||||| |||| | ||||| |||| | ||||||||||||| |||||||| ||||||   ||||||||||||||||    
T  40058121 aaaatggtaaacggcagaagagttatgagaccaatttgaaacacttaatagttaagggatcaaaatgaaaaccaaaaataagttaagaga 40058032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 11907203 - 11907279
Alignment:
Q  42 accaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaagagactcggggatctattaa 117  Q
    |||||||||| | | ||||||||||||| | |||||||| ||| |||||||||||||| |||  |||||| ||||||    
T  11907203 accaaattgaaacatttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgggggatgtattaa 11907279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 14328787 - 14328891
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaagagactcggggatc 111  Q
    |||||||||||||||  |||| |||| | |||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||     
T  14328787 aaaatagtaaacgacaaaagaattatgagaccaaattaagacacttaatagttaagggatcaaactgagaaaataaaataagttaagggact-ggggatg 14328885  T
Q  112 tattaa 117  Q
    ||||||    
T  14328886 tattaa 14328891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 14421797 - 14421901
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaagagactcggggatc 111  Q
    |||||||||||||||  |||| |||| | |||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||     
T  14421797 aaaatagtaaacgacaaaagaattatgagaccaaattaagacacttaatagttaagggatcaaactgagaaaataaaataagttaagggact-ggggatg 14421895  T
Q  112 tattaa 117  Q
    ||||||    
T  14421896 tattaa 14421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 16269823 - 16269871
Alignment:
Q  55 acttaatagttaag-gatcaaactgaaaaaataaaataagttaagagac 102  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  16269823 acttaatagttaagagatcaaactgagaaaataaaataagttaagagac 16269871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 14326254 - 14326170
Alignment:
Q  15 aatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||  ||||| ||||   ||||||||||||  || |||| |||||| |||||||||| ||||||||||||||||||    
T  14326254 aatagtaaacgatagaagaattatgggaccaaattgagacgctcaataattaagggatcaaactgagaaaataaaataagttaag 14326170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 14419264 - 14419180
Alignment:
Q  15 aatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||  ||||| ||||   ||||||||||||  || |||| |||||| |||||||||| ||||||||||||||||||    
T  14419264 aatagtaaacgatagaagaattatgggaccaaattgagacgctcaataattaagggatcaaactgagaaaataaaataagttaag 14419180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 1692133 - 1692072
Alignment:
Q  57 ttaatagttaag-gatcaaactgaaaaaataaaataagttaagagactcggggatctattaa 117  Q
    |||||||||||| || |||||||||||| |||||||| ||||| |||| |||||| ||||||    
T  1692133 ttaatagttaagagaccaaactgaaaaattaaaataaattaagggactgggggatgtattaa 1692072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 13800105 - 13800048
Alignment:
Q  42 accaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||| | | ||||||||||||| | |||||||| ||||||||||||||||||    
T  13800105 accaaattgacacaattaatagttaagggaccaaactgagaaaataaaataagttaag 13800048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 27107255 - 27107198
Alignment:
Q  42 accaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||| ||| |||||||||||  ||||||||||| ||| ||||||||||||||    
T  27107255 accaaattgaaatatttaatagttaattgatcaaactgagaaattaaaataagttaag 27107198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 27149061 - 27149004
Alignment:
Q  42 accaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||| ||| |||||||||||  ||||||||||| ||| ||||||||||||||    
T  27149061 accaaattgaaatatttaatagttaattgatcaaactgagaaattaaaataagttaag 27149004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 16251632 - 16251680
Alignment:
Q  56 cttaatagttaagg-atcaaactgaaaaaataaaataagttaagagact 103  Q
    ||||||| |||||| | ||||||||||||||||||||| ||||||||||    
T  16251632 cttaataattaagggaccaaactgaaaaaataaaataatttaagagact 16251680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 35173250 - 35173145
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaagagactcggggatc 111  Q
    |||||||||||||||  |||| |||| | |||||||||| ||||||||||||||| |||| ||| ||| |||||||||||||||||| |||| ||||||     
T  35173250 aaaatagtaaacgacaaaagagttatgagaccaaattgaaatacttaatagttaagggatgaaattgagaaaataaaataagttaagggactgggggatg 35173151  T
Q  112 tattaa 117  Q
    ||||||    
T  35173150 tattaa 35173145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 43346467 - 43346546
Alignment:
Q  20 taaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||| ||||| |||| | |||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||    
T  43346467 taaacgacagaagagttatgagaccaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaag 43346546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 21128028 - 21127942
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaag 98  Q
    ||||| ||||||| | ||||| ||||   |||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||    
T  21128028 aaaatggtaaacggcagaagagttatgggaccaaattgacacacttaatagttaagagatcaaactgaaaaaataaaataagttaag 21127942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 12062426 - 12062483
Alignment:
Q  42 accaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  12062426 accaaattgagacacttaatagttaagggaccaaactgaaaaaataaaataagttaag 12062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 23561140 - 23561224
Alignment:
Q  15 aatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||| | ||||| |||||  |||||||| ||| |||||||| |||||| |||||||||| ||||||||||||||||||    
T  23561140 aatagtaaacgtcagaagaattataggaccaaattaagacacttaataattaagggatcaaactgagaaaataaaataagttaag 23561224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 23559922 - 23559836
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||||| ||||| ||||   | |||||||||| |||||||| |||| ||| |||||||| ||||||||||||||||||    
T  23559922 aaaatagtaaacgacagaagaattatgggatcaaattgagacacttaataattaagggaccaaactgagaaaataaaataagttaag 23559836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 12060731 - 12060657
Alignment:
Q  43 ccaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaagagactcggggatctattaa 117  Q
    ||||||||||| |||||||||||||| ||  ||||||| |||||||||||||||||| |||| |||||| ||||||    
T  12060731 ccaaattgagacacttaatagttaagagactaaactgagaaaataaaataagttaagggact-ggggatgtattaa 12060657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 7921685 - 7921742
Alignment:
Q  42 accaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaag 98  Q
    ||||| |||||| |||||||||||||| ||||||||||| |||| |||||||||||||    
T  7921685 accaatttgagacacttaatagttaagtgatcaaactgagaaaacaaaataagttaag 7921742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 48866228 - 48866155
Alignment:
Q  29 gaagacttataaaaccaaattgagatacttaatagttaaggatc-aaactgaaaaaataaaataagttaagaga 101  Q
    |||||||||||  |||||||||| | ||||||||||| |||  | ||||||| |||||||||||||||||||||    
T  48866228 gaagacttataggaccaaattgacacacttaatagttcagggactaaactgagaaaataaaataagttaagaga 48866155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 50150795 - 50150719
Alignment:
Q  42 accaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaagagactcggggatctattaa 117  Q
    |||||||||| | | |||||||||||| || |||||||| ||| |||||||||||||| ||| ||||||| ||||||    
T  50150795 accaaattgaaacatttaatagttaagtgaccaaactgagaaattaaaataagttaagggacccggggatgtattaa 50150719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 35174395 - 35174481
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||||  ||||| ||||   ||||  |||| | ||||||||||||||| | |||| ||||||||||||||||||||||    
T  35174395 aaaatagtaaacgatagaagagttatgggaccattttgaaacacttaatagttaagggaccaaaatgaaaaaataaaataagttaag 35174481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 38639121 - 38639035
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||  ||||||||||||| ||  | ||||||| || | |||| |||||||||| | |||||||||||| ||||||||||||||    
T  38639121 aaaatagagaacgacggaagacataagagaccaaatcgaaacactttatagttaagggaccaaactgaaaaactaaaataagttaag 38639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 11220671 - 11220724
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagtta 66  Q
    ||||||||||||||| ||||| |||||  |||||||||||| |||| |||||||    
T  11220671 aaaatagtaaacgacagaagatttataggaccaaattgagacactttatagtta 11220724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 47808119 - 47808176
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagga 70  Q
    ||||||| ||||||| ||||| |||| | |||||||||||| |||| |||||||||||    
T  47808119 aaaatagcaaacgacagaagatttatgagaccaaattgagacactttatagttaagga 47808176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 48867472 - 48867529
Alignment:
Q  42 accaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||| | ||||||||||||| ||| |||| ||| ||||||||||||||||||    
T  48867472 accaaattgacacacttaatagttaagggaccaaattgagaaaataaaataagttaag 48867529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 47766968 - 47767048
Alignment:
Q  17 tagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaaggatcaaactgaaaaaataaaataagttaa 97  Q
    |||||||||  |||||||||||   |||||||||||| |||| ||||||| ||| |||| ||||||   ||||||||||||    
T  47766968 tagtaaacggaggaagacttatgggaccaaattgagacactttatagttagggaccaaaatgaaaaccaaaaataagttaa 47767048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 54653979 - 54654035
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg 69  Q
    ||||||||||||||| ||||| ||||   |||||||||||| |||| ||||||||||    
T  54653979 aaaatagtaaacgacagaagaattatgggaccaaattgagacactttatagttaagg 54654035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 20308708 - 20308619
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaagaga 101  Q
    ||||||||||||||| ||||| |||| | |||||||||||| ||||||||||||||  |  ||||||| |||||||||||||||||||||    
T  20308708 aaaatagtaaacgacagaagagttatgagaccaaattgagacacttaatagttaagatactaaactgagaaaataaaataagttaagaga 20308619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 21095341 - 21095252
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaagaga 101  Q
    ||||||||||||||| ||||| |||| | |||||||||||| ||||||||||||||  |  ||||||| |||||||||||||||||||||    
T  21095341 aaaatagtaaacgacagaagagttatgagaccaaattgagacacttaatagttaagatactaaactgagaaaataaaataagttaagaga 21095252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 8095449 - 8095345
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaagagactcggggatc 111  Q
    |||||||||||||||  |||| | ||   |||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||| ||| |||||||     
T  8095449 aaaatagtaaacgacaaaagagtaatgggaccaaattgagacacttaatagttaagggaccaaactgagaaaataaaataagttaagggac-cggggatg 8095351  T
Q  112 tattaa 117  Q
    ||||||    
T  8095350 tattaa 8095345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 41522701 - 41522787
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagtt-aaggatcaaactgaaaaaataaaataagttaag 98  Q
    |||| |||||||| | |||||||||||  |||||||||| | ||||||||||| || ||| ||||||| ||||||||||||||||||    
T  41522701 aaaacagtaaacggcagaagacttataggaccaaattgacacacttaatagttaaatgattaaactgagaaaataaaataagttaag 41522787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 8096558 - 8096663
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaagagactcggggatc 111  Q
    |||||||||||||    |||| |||| | |||||||| |||  ||||||||||||| ||  |||||||||||||||||||||||||| |||| ||||||     
T  8096558 aaaatagtaaacggtaaaagagttatgagaccaaattaagacgcttaatagttaagagactaaactgaaaaaataaaataagttaagggactaggggatg 8096657  T
Q  112 tattaa 117  Q
    ||||||    
T  8096658 tattaa 8096663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 34616203 - 34616146
Alignment:
Q  42 accaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||    
T  34616203 accaaattgagacactttatagttaagagatcaaactgagaaaataaaataagttaag 34616146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 22621162 - 22621233
Alignment:
Q  28 ggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||||   |||||||||  | ||||||||||||||| |||||||||| ||||||||||||||||||    
T  22621162 ggaagacttatgggaccaaattgccacacttaatagttaagggatcaaactgagaaaataaaataagttaag 22621233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 22619969 - 22619912
Alignment:
Q  42 accaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||| | |||||| |||||||| |||||||||| ||||||||||||||||||    
T  22619969 accaaattgacacacttaaaagttaagggatcaaactgagaaaataaaataagttaag 22619912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 41521391 - 41521334
Alignment:
Q  42 accaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||| | | |||| |||||||||| |||||||||||||||||||||||||||||    
T  41521391 accaaattaacacactttatagttaagggatcaaactgaaaaaataaaataagttaag 41521334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 13367063 - 13367149
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||| | ||||| ||||   |||||||| | | |||| |||||||||| | |||| ||||||||||||||||||||||    
T  13367063 aaaatagtaaacggcagaagatttatgggaccaaattaaaacactttatagttaagggaccaaagtgaaaaaataaaataagttaag 13367149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 22914247 - 22914289
Alignment:
Q  57 ttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  22914247 ttaatagttaatggatcaaactgaaaaattaaaataagttaag 22914289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 39220783 - 39220693
Alignment:
Q  12 gaaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaagaga 101  Q
    |||||||||||||| | |||||||||   || |||||||| | |||||||||||||  || |||| ||| ||| |||||||||||||||||    
T  39220783 gaaaatagtaaacggcagaagacttaaggaatcaaattgaaacacttaatagttaatagaccaaaatgagaaattaaaataagttaagaga 39220693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 35463031 - 35463087
Alignment:
Q  42 accaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaa 97  Q
    ||||| |||||| | || |||||||||| |||||||||| |||||||||||||||||    
T  35463031 accaatttgagacattttatagttaagggatcaaactgagaaaataaaataagttaa 35463087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 36511344 - 36511449
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaagagactcggggatc 111  Q
    ||||||||||||||| ||||| ||||   |||||||||||| |||| |||||||| ||| |||||||| |||||||||||| ||||| |||| ||||||     
T  36511344 aaaatagtaaacgacagaagatttatgggaccaaattgagacactttatagttaagggaccaaactgagaaaataaaataaattaagggactgggggatg 36511443  T
Q  112 tattaa 117  Q
    ||||||    
T  36511444 tattaa 36511449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 51726857 - 51726962
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagtt-aaggatcaaactgaaaaaataaaataagttaagagactcggggatc 111  Q
    ||||||||||||||| ||||| ||||  ||||||||||||| |||| |||||| || || |||||||| |||||||||||||||||| |||  ||||||     
T  51726857 aaaatagtaaacgacagaagatttatggaaccaaattgagacactttatagttaaatgaccaaactgagaaaataaaataagttaagggaccgggggatg 51726956  T
Q  112 tattaa 117  Q
    ||||||    
T  51726957 tattaa 51726962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 14764332 - 14764246
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||| |||||||||| |||||||||| | |||||||| | | |||||||| |||||| |||||||| ||||||||||||||||||||    
T  14764332 aaaacagtaaacgacagaagacttatgagaccaaattaacacacttaataattaagggatcaaactaaaaaaataaaataagttaag 14764246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 24516422 - 24516332
Alignment:
Q  28 ggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaagagactcggggatctattaa 117  Q
    ||||||||||| | |||||||||| | ||||||||||||||| |||||||| | |||||||||||||||||| |||  |||||| ||||||    
T  24516422 ggaagacttatgagaccaaattgacacacttaatagttaagggatcaaactcagaaaataaaataagttaagggaccgggggatgtattaa 24516332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 26802042 - 26801956
Alignment:
Q  17 tagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaagagac 102  Q
    |||||||||  ||||||||||| | || ||||| | | ||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  26802042 tagtaaacggaggaagacttatgagactaaatttacacacttaatagttaagggatcaaactgaaaaaataaaataagctaagagac 26801956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 40110680 - 40110751
Alignment:
Q  28 ggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||||   |||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||    
T  40110680 ggaagacttatgggaccaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaag 40110751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 36509914 - 36509828
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||| | ||||| ||||  ||||||||||| | |||| |||||||| ||| |||||||| ||||||||||||||||||    
T  36509914 aaaatagtaaacggcagaagatttatggaaccaaattgaaacactttatagttaagggaccaaactgagaaaataaaataagttaag 36509828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 40812624 - 40812710
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||| | | ||||| ||||| ||||||||||||| ||||||||||||| ||| ||||||   ||||||||||||||||||    
T  40812624 aaaatagtaaatggcagaagagttatataaccaaattgagacacttaatagttaagggaccaaactaggaaaataaaataagttaag 40812710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 14169722 - 14169617
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaagagactcggggatc 111  Q
    |||||||||||||||  |||| ||||   |||||||||||| | || |||||||| ||| |||||||| |||||||||||||||||| |||| ||| ||     
T  14169722 aaaatagtaaacgacaaaagatttatgggaccaaattgagacattttatagttaaaggaccaaactgagaaaataaaataagttaagggactggggaatg 14169623  T
Q  112 tattaa 117  Q
    ||||||    
T  14169622 tattaa 14169617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 19466220 - 19466300
Alignment:
Q  15 aatagtaaacgacggaagacttataaaaccaaattgagatacttaatagtt-aaggatcaaactgaaaaaataaaataagt 94  Q
    ||||||||||||| ||||| ||||   |||||||||||| |||| |||||| ||||| |||||||| ||||||||||||||    
T  19466220 aatagtaaacgacagaagatttatgggaccaaattgagacactttatagttaaaggaccaaactgagaaaataaaataagt 19466300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 26803260 - 26803315
Alignment:
Q  44 caaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaag 98  Q
    |||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||    
T  26803260 caaattgacacacttaatagttaagagatcaaactgagaaaataaaataagttaag 26803315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 40109435 - 40109378
Alignment:
Q  42 accaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||| | |||||| |||||||| |||||||||| ||||||||||||||||||    
T  40109435 accaaattgacacacttaaaagttaagggatcaaactgagaaaataaaataagttaag 40109378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 14765136 - 14765192
Alignment:
Q  42 accaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaa 97  Q
    |||||||||| | ||||||||||||||| | |||||||| |||||||||||||||||    
T  14765136 accaaattgacacacttaatagttaagggaccaaactgagaaaataaaataagttaa 14765192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 19464703 - 19464619
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagtta 96  Q
    ||||||||||||| | ||||| || |  ||||||||||| | |||| ||| |||||| | |||||||||||||||||||||||||    
T  19464703 aaaatagtaaacggcagaagatttgtggaaccaaattgaaacactttataattaagggaccaaactgaaaaaataaaataagtta 19464619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 40811267 - 40811212
Alignment:
Q  44 caaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||    
T  40811267 caaattgagacatttaatagttaagggatcaaactgagaaaatagaataagttaag 40811212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 38283756 - 38283838
Alignment:
Q  17 tagtaaacgacggaagacttataaaaccaaattgagatacttaatagtta-aggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||  |||||  ||||  |||||||||| | ||||||||| || ||||  ||||||||||||||||||||||||||    
T  38283756 tagtaaacgaaagaagatatataggaccaaattgacacacttaatagatagaggactaaactgaaaaaataaaataagttaag 38283838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 8092696 - 8092615
Alignment:
Q  18 agtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||  |||||| ||||  ||||||||||| | ||||||||||||| |||  | ||||| ||||||||||||||||||    
T  8092696 agtaaacggaggaagatttatggaaccaaattgatacacttaatagttaagggactacactgagaaaataaaataagttaag 8092615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 17319145 - 17319055
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaagagac 102  Q
    ||||||||||||| | ||||| ||||  ||||||||||| | |||| ||||||||| ||||||||||| ||| ||||||||||||||||||    
T  17319145 aaaatagtaaacgccagaagatttatggaaccaaattgaaacactttatagttaagagatcaaactgagaaattaaaataagttaagagac 17319055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 50531769 - 50531855
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||||||||  |||| ||||   |||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||    
T  50531769 aaaatagtaaacgacaaaagagttatgggaccaaattgagacacttaatagttaagggatcaaattgagaaaataaaataagttaag 50531855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 44159160 - 44159103
Alignment:
Q  41 aaccaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaa 97  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||    
T  44159160 aaccaaattgaaacacttaatagttaagagatcaaactgaaaaaataaaataagttaa 44159103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 38419030 - 38419116
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagga-tcaaactgaaaaaataaaataagttaag 98  Q
    |||| |||||||| | |||||||||| | |||||||||| | |||||||| ||||||| | ||||||| ||||||||||||||||||    
T  38419030 aaaacagtaaacggcagaagacttatgagaccaaattgacacacttaataattaaggaattaaactgagaaaataaaataagttaag 38419116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 34438509 - 34438420
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaaggatc-aaactgaaaaaataaaataagttaagaga 101  Q
    ||||||||||||| | ||||| ||||   |||||||||||| |||| ||||||||||  | ||||||| |||||||||||||||||||||    
T  34438509 aaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaagggactaaactgagaaaataaaataagttaagaga 34438420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 38417655 - 38417571
Alignment:
Q  14 aaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaa 97  Q
    ||||||||||||||  |||| ||||   |||||||||| | ||||||||||||| ||| |||||||| |||||||||||||||||    
T  38417655 aaatagtaaacgacataagatttatgggaccaaattgacacacttaatagttaagggaccaaactgagaaaataaaataagttaa 38417571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 41348327 - 41348257
Alignment:
Q  28 ggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaa 97  Q
    |||||||||||   | |||||||| | ||||||||||||| |||||||||||| |||||||||||||||||    
T  41348327 ggaagacttatgggatcaaattgacacacttaatagttaagggatcaaactgagaaaataaaataagttaa 41348257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 50530606 - 50530520
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||||  ||||| ||||   ||||  |||||| ||||||||||||| ||| |||||||| ||||||||||||||||||    
T  50530606 aaaatagtaaacgatagaagagttatgggaccattttgagacacttaatagttaaaggaccaaactgagaaaataaaataagttaag 50530520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 41349569 - 41349624
Alignment:
Q  44 caaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||||| | |||||| |||||||| |||||||||| ||||||||||||||||||    
T  41349569 caaattgacacacttaaaagttaagggatcaaactgagaaaataaaataagttaag 41349624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 6139100 - 6139014
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    |||||| ||||| ||  |||| |||| | |||||||||||| | |||||| |||||| | |||||||| ||||||||||||||||||    
T  6139100 aaaataataaacaacataagagttatgagaccaaattgagacatttaataattaagggaccaaactgagaaaataaaataagttaag 6139014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 26393140 - 26393226
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagtt-aaggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||| ||||||||| ||||| ||||   |||||||||||| |||| |||||| |||||||||| | |||| | |||||||||||||    
T  26393140 aaaatggtaaacgacagaagagttatgggaccaaattgagacactttatagttaaaggatcaaaataaaaataaaaaataagttaag 26393226  T

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Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 10403431 - 10403520
Alignment:
Q  14 aaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaaggatcaaactgaaaaaataaaataagttaagagact 103  Q
    ||||| |||||||| ||||| |||| | |||||||||| | |||| |||||||   |||||| ||||||   ||||||||||||||||||    
T  10403431 aaataataaacgactgaagatttatgagaccaaattgatacactttatagttagaaatcaaagtgaaaaccaaaaataagttaagagact 10403520  T

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Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 34439673 - 34439778
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaagagactcggggatc 111  Q
    ||||||||||||| | ||||| ||||   |||||||||| | | || |||||||||| | || ||||| |||||||||||||||||| ||||  |||||     
T  34439673 aaaatagtaaacggcagaagatttatgggaccaaattgaaacattttatagttaagggaccacactgagaaaataaaataagttaagggactgagggatg 34439772  T
Q  112 tattaa 117  Q
    ||||||    
T  34439773 tattaa 34439778  T

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Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 43419417 - 43419474
Alignment:
Q  42 accaaattgagatacttaatagttaaggatc-aaactgaaaaaataaaataagttaag 98  Q
    |||||||||||| |||| ||||||||||  | ||||||| ||||||||||||||||||    
T  43419417 accaaattgagacactttatagttaagggacgaaactgagaaaataaaataagttaag 43419474  T

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Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 43708910 - 43708834
Alignment:
Q  42 accaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaagagactcggggatctattaa 117  Q
    |||||||||| | | ||||||||||| |||  ||||||| ||| ||||||||||||||||||  |||||| ||||||    
T  43708910 accaaattgaaacatttaatagttaatggactaaactgagaaattaaaataagttaagagaccgggggatgtattaa 43708834  T

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Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 7983724 - 7983812
Alignment:
Q  29 gaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaagagactcggggatctattaa 117  Q
    |||||||||||  |||||||||| | ||||||||||||||| || ||||||| |||||||||||||||||| || |||||||| ||||||    
T  7983724 gaagacttataggaccaaattgacacacttaatagttaaggaattaaactgagaaaataaaataagttaaggga-tcggggatgtattaa 7983812  T

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Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 3533640 - 3533724
Alignment:
Q  14 aaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaa 97  Q
    ||||||||||||||  |||| |||| | |||||||||| | ||||||||||||| ||| |||||| |||||||||||||||||||    
T  3533640 aaatagtaaacgacaaaagatttatgagaccaaattgacacacttaatagttaagggaccaaactaaaaaaataaaataagttaa 3533724  T

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Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 3532297 - 3532211
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||| |||  |||||||||   |||||||||| | |||||||| |||||| ||||||||||||||||||||||| |||||    
T  3532297 aaaatagtaaatgacaaaagacttatgtgaccaaattgacacacttaataattaagggatcaaactgaaaaaataaaataaattaag 3532211  T

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Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 14510522 - 14510607
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaa 97  Q
    ||||||||||||| | ||||| |||||  |||||||||||| ||||||||||||| |||  ||||| | |||||||||||||||||    
T  14510522 aaaatagtaaacggcagaagagttataggaccaaattgagacacttaatagttaagggactaaactaagaaaataaaataagttaa 14510607  T

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Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 15850186 - 15850129
Alignment:
Q  42 accaaattgagatacttaatagttaag-gatcaaactgaaaaaataaaataagttaag 98  Q
    |||||||||||| |||| ||||||||| || |||||||||||||||||||||||||||    
T  15850186 accaaattgagacactttatagttaagagaccaaactgaaaaaataaaataagttaag 15850129  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 7982386 - 7982330
Alignment:
Q  42 accaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaa 97  Q
    |||||||||| | |||| |||||||||| |||||||||| |||||||||||||||||    
T  7982386 accaaattgacacactttatagttaagggatcaaactgagaaaataaaataagttaa 7982330  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 25570883 - 25570969
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaa-ggatcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||| |  |||||||||||  || |||||||| | ||||||||||||| |||  | ||||| ||||||||||||||||||    
T  25570883 aaaatagtaaatggaggaagacttatggaatcaaattgaaacacttaatagttaagggactacactgagaaaataaaataagttaag 25570969  T

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Target: scaffold0098 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 42359 - 42445
Alignment:
Q  13 aaaatagtaaacgacggaagacttataaaaccaaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaag 98  Q
    ||||||||||||||| ||||| ||||   | |||||||| | || |||||||||||| |||||||||| ||||||||||||||||||    
T  42359 aaaatagtaaacgacagaagatttatgggatcaaattgatacacgtaatagttaagggatcaaactgagaaaataaaataagttaag 42445  T

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Target: scaffold0098; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 40977 - 40913
Alignment:
Q  55 acttaatagttaagg-atcaaactgaaaaaataaaataagttaagagactcggggatctattaaa 118  Q
    ||||||||||||||| |||||||||||||||||||| | |||||| |||  |||||| |||||||    
T  40977 acttaatagttaagggatcaaactgaaaaaataaaaaaggttaagggaccaggggatgtattaaa 40913  T

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Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 17205 - 17258
Alignment:
Q  45 aaattgagatacttaatagttaagg-atcaaactgaaaaaataaaataagttaa 97  Q
    ||||||||| ||||||||||||||| | ||||||||||||||||||||||||||    
T  17205 aaattgagacacttaatagttaagggaccaaactgaaaaaataaaataagttaa 17258  T

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