View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18685_low_7 (Length: 325)

Name: NF18685_low_7
Description: NF18685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18685_low_7
NF18685_low_7
[»] chr2 (37 HSPs)
chr2 (150-311)||(11090521-11090690)
chr2 (146-311)||(43058329-43058502)
chr2 (150-310)||(40815722-40815890)
chr2 (153-317)||(239356-239528)
chr2 (152-315)||(8425732-8425903)
chr2 (153-307)||(22374323-22374485)
chr2 (153-311)||(40027143-40027309)
chr2 (153-311)||(1978111-1978277)
chr2 (153-311)||(18451207-18451373)
chr2 (150-311)||(14432142-14432311)
chr2 (153-315)||(26538450-26538621)
chr2 (153-307)||(26538100-26538262)
chr2 (153-311)||(28616616-28616783)
chr2 (150-311)||(3025466-3025634)
chr2 (153-298)||(7446345-7446497)
chr2 (153-282)||(20444752-20444889)
chr2 (192-302)||(7446730-7446841)
chr2 (150-302)||(40027524-40027685)
chr2 (153-302)||(18450833-18450991)
chr2 (153-302)||(22374709-22374867)
chr2 (153-302)||(40815348-40815506)
chr2 (153-282)||(35781068-35781205)
chr2 (137-282)||(35779694-35779848)
chr2 (157-302)||(239736-239890)
chr2 (153-259)||(28847123-28847237)
chr2 (153-282)||(20440437-20440573)
chr2 (153-268)||(1978528-1978651)
chr2 (153-302)||(11090904-11091062)
chr2 (153-302)||(28616998-28617156)
chr2 (153-302)||(43058717-43058874)
chr2 (194-301)||(3025848-3025955)
chr2 (153-282)||(8972240-8972377)
chr2 (153-282)||(15551502-15551639)
chr2 (152-301)||(8425357-8425514)
chr2 (196-283)||(15552458-15552545)
chr2 (153-302)||(14432525-14432683)
chr2 (272-311)||(28143407-28143446)
[»] chr5 (45 HSPs)
chr5 (153-311)||(2865131-2865297)
chr5 (153-309)||(29455120-29455284)
chr5 (148-310)||(8647436-8647606)
chr5 (153-311)||(18183345-18183511)
chr5 (146-311)||(19359132-19359305)
chr5 (153-311)||(5819305-5819471)
chr5 (153-311)||(14215619-14215785)
chr5 (195-311)||(164567-164683)
chr5 (153-317)||(24362205-24362378)
chr5 (192-311)||(8460980-8461099)
chr5 (150-309)||(15372251-15372418)
chr5 (153-311)||(15708974-15709139)
chr5 (195-309)||(25000143-25000257)
chr5 (153-302)||(19359520-19359678)
chr5 (150-302)||(5818929-5819090)
chr5 (150-302)||(18182970-18183131)
chr5 (200-317)||(24331929-24332049)
chr5 (195-302)||(24361890-24361997)
chr5 (153-302)||(8647822-8647980)
chr5 (198-307)||(14463901-14464009)
chr5 (153-311)||(16018592-16018756)
chr5 (195-302)||(24325265-24325372)
chr5 (153-302)||(2864757-2864915)
chr5 (153-302)||(8461315-8461473)
chr5 (153-302)||(24331562-24331722)
chr5 (148-282)||(7349422-7349564)
chr5 (153-255)||(15371874-15371983)
chr5 (197-302)||(14215296-14215402)
chr5 (199-304)||(25000471-25000577)
chr5 (195-302)||(29454793-29454901)
chr5 (150-304)||(16018969-16019132)
chr5 (153-301)||(164194-164350)
chr5 (153-262)||(4222147-4222264)
chr5 (146-268)||(7348555-7348685)
chr5 (199-280)||(6019177-6019259)
chr5 (201-302)||(15709353-15709455)
chr5 (201-281)||(4624631-4624711)
chr5 (195-280)||(4219716-4219800)
chr5 (192-283)||(4623198-4623287)
chr5 (193-282)||(13814133-13814226)
chr5 (224-302)||(14462686-14462769)
chr5 (198-281)||(6018370-6018452)
chr5 (272-302)||(14340793-14340823)
chr5 (241-302)||(10721884-10721945)
chr5 (153-182)||(14215244-14215273)
[»] chr7 (28 HSPs)
chr7 (150-311)||(19830420-19830589)
chr7 (150-311)||(29100227-29100396)
chr7 (153-311)||(19590528-19590694)
chr7 (153-311)||(37786770-37786936)
chr7 (195-311)||(2659216-2659332)
chr7 (156-317)||(23953099-23953268)
chr7 (153-310)||(38858646-38858811)
chr7 (153-309)||(34534169-34534333)
chr7 (153-311)||(32004990-32005156)
chr7 (153-311)||(35289277-35289443)
chr7 (150-311)||(4641440-4641609)
chr7 (150-317)||(4478070-4478245)
chr7 (153-302)||(19590909-19591067)
chr7 (153-302)||(38859025-38859183)
chr7 (153-301)||(32004617-32004774)
chr7 (153-282)||(38160954-38161091)
chr7 (153-302)||(4641828-4641983)
chr7 (192-302)||(29099900-29100011)
chr7 (153-302)||(2658842-2659000)
chr7 (153-300)||(37787153-37787309)
chr7 (153-280)||(28583442-28583577)
chr7 (153-302)||(19830804-19830961)
chr7 (153-302)||(34533794-34533952)
chr7 (198-282)||(28584327-28584411)
chr7 (153-258)||(35288906-35289019)
chr7 (195-259)||(23952784-23952848)
chr7 (276-315)||(32427393-32427432)
chr7 (153-181)||(23952733-23952761)
[»] chr1 (41 HSPs)
chr1 (153-317)||(18984122-18984295)
chr1 (153-317)||(5540188-5540360)
chr1 (147-317)||(29306950-29307128)
chr1 (153-311)||(50970654-50970820)
chr1 (153-311)||(15646571-15646737)
chr1 (150-311)||(15173096-15173265)
chr1 (143-311)||(29869613-29869789)
chr1 (150-311)||(5962954-5963123)
chr1 (153-310)||(33144296-33144461)
chr1 (153-311)||(21856419-21856585)
chr1 (195-317)||(17433269-17433392)
chr1 (153-311)||(8678918-8679083)
chr1 (153-309)||(26859438-26859601)
chr1 (153-317)||(29307311-29307484)
chr1 (19-149)||(17112095-17112219)
chr1 (195-317)||(39154072-39154195)
chr1 (153-311)||(9018976-9019142)
chr1 (202-311)||(4636033-4636141)
chr1 (153-302)||(21856045-21856203)
chr1 (153-304)||(17433597-17433757)
chr1 (153-302)||(5539819-5539977)
chr1 (153-301)||(4636356-4636513)
chr1 (153-317)||(9019332-9019505)
chr1 (153-300)||(50970281-50970437)
chr1 (153-268)||(18984538-18984661)
chr1 (153-259)||(8678544-8678658)
chr1 (153-302)||(15173478-15173635)
chr1 (153-302)||(29870003-29870161)
chr1 (158-302)||(33143925-33144078)
chr1 (153-282)||(52268293-52268430)
chr1 (153-302)||(39154404-39154562)
chr1 (153-302)||(15646195-15646353)
chr1 (153-259)||(26859062-26859176)
chr1 (153-302)||(5962581-5962739)
chr1 (196-302)||(17112335-17112442)
chr1 (194-258)||(52269177-52269241)
chr1 (192-228)||(2733416-2733452)
chr1 (153-191)||(47826967-47827005)
chr1 (195-242)||(47827033-47827080)
chr1 (278-311)||(17088517-17088550)
chr1 (153-181)||(52269262-52269290)
[»] chr4 (58 HSPs)
chr4 (153-311)||(46193781-46193947)
chr4 (153-317)||(38962189-38962361)
chr4 (153-310)||(33109687-33109852)
chr4 (192-311)||(51020847-51020966)
chr4 (153-311)||(25447612-25447778)
chr4 (153-309)||(23494446-23494610)
chr4 (153-311)||(11153523-11153689)
chr4 (153-311)||(15523610-15523776)
chr4 (153-311)||(25937673-25937839)
chr4 (192-311)||(12234379-12234498)
chr4 (153-311)||(22170313-22170478)
chr4 (153-317)||(4219560-4219733)
chr4 (150-311)||(22434554-22434721)
chr4 (150-311)||(45082432-45082599)
chr4 (194-311)||(48526248-48526364)
chr4 (150-317)||(54995437-54995612)
chr4 (210-311)||(12503812-12503913)
chr4 (150-311)||(2118672-2118840)
chr4 (148-304)||(46193403-46193568)
chr4 (150-302)||(54995069-54995230)
chr4 (148-302)||(25447245-25447408)
chr4 (153-302)||(22434182-22434340)
chr4 (153-301)||(15523238-15523395)
chr4 (150-302)||(48526565-48526726)
chr4 (147-302)||(45082808-45082972)
chr4 (150-302)||(4219943-4220104)
chr4 (153-258)||(23494872-23494985)
chr4 (148-302)||(12234713-12234876)
chr4 (153-268)||(33109883-33110006)
chr4 (153-302)||(11153149-11153307)
chr4 (153-302)||(20470895-20471053)
chr4 (150-302)||(18751599-18751760)
chr4 (194-282)||(44892553-44892641)
chr4 (153-268)||(25938090-25938213)
chr4 (199-282)||(48713751-48713834)
chr4 (153-268)||(2118296-2118419)
chr4 (153-302)||(51021180-51021337)
chr4 (153-282)||(20958266-20958401)
chr4 (200-302)||(12503494-12503597)
chr4 (150-278)||(16690936-16691072)
chr4 (195-282)||(43243686-43243772)
chr4 (200-282)||(43242328-43242410)
chr4 (195-280)||(43281198-43281282)
chr4 (153-282)||(48293597-48293734)
chr4 (195-282)||(44890570-44890657)
chr4 (153-256)||(18763951-18764062)
chr4 (192-278)||(48708345-48708431)
chr4 (199-280)||(20957246-20957327)
chr4 (201-282)||(48294947-48295029)
chr4 (251-311)||(18751978-18752038)
chr4 (203-282)||(44220782-44220861)
chr4 (205-278)||(16691481-16691554)
chr4 (241-311)||(17504072-17504142)
chr4 (153-259)||(35363028-35363143)
chr4 (153-268)||(10258306-10258429)
chr4 (153-191)||(16318280-16318318)
chr4 (278-311)||(17504336-17504369)
chr4 (278-311)||(35193443-35193476)
[»] chr8 (30 HSPs)
chr8 (153-317)||(19176659-19176832)
chr8 (153-311)||(41681137-41681302)
chr8 (150-311)||(33328158-33328327)
chr8 (153-309)||(31133223-31133387)
chr8 (153-311)||(12571866-12572033)
chr8 (153-312)||(11656458-11656626)
chr8 (154-311)||(13224645-13224809)
chr8 (153-311)||(9930033-9930199)
chr8 (153-311)||(44831621-44831787)
chr8 (194-308)||(33743298-33743412)
chr8 (153-317)||(9178005-9178177)
chr8 (147-302)||(12572235-12572399)
chr8 (153-302)||(9928912-9929070)
chr8 (153-302)||(13225023-13225181)
chr8 (153-302)||(19176293-19176451)
chr8 (153-302)||(44831250-44831408)
chr8 (151-311)||(4630168-4630330)
chr8 (153-301)||(31133605-31133762)
chr8 (144-259)||(41681562-41681685)
chr8 (153-302)||(11656841-11656999)
chr8 (153-268)||(34540967-34541090)
chr8 (153-302)||(33328524-33328682)
chr8 (153-302)||(33742925-33743082)
chr8 (192-296)||(4629847-4629952)
chr8 (221-282)||(43958264-43958325)
chr8 (202-280)||(10918186-10918264)
chr8 (153-250)||(11336959-11337064)
chr8 (198-282)||(8073957-8074040)
chr8 (234-302)||(9177724-9177793)
chr8 (153-182)||(9177670-9177699)
[»] chr3 (57 HSPs)
chr3 (150-311)||(5136980-5137149)
chr3 (148-311)||(41046698-41046869)
chr3 (153-311)||(37726932-37727098)
chr3 (153-311)||(39555953-39556119)
chr3 (153-311)||(31779028-31779194)
chr3 (153-311)||(20840563-20840729)
chr3 (153-311)||(24300932-24301098)
chr3 (153-315)||(43973444-43973614)
chr3 (153-311)||(23644465-23644631)
chr3 (138-311)||(27393953-27394134)
chr3 (153-311)||(25853603-25853769)
chr3 (156-297)||(48452995-48453144)
chr3 (153-315)||(32535330-32535505)
chr3 (153-311)||(30104485-30104650)
chr3 (154-311)||(22425189-22425354)
chr3 (192-311)||(26274943-26275061)
chr3 (197-317)||(17464860-17464982)
chr3 (153-311)||(26837732-26837897)
chr3 (153-302)||(27393664-27393822)
chr3 (153-302)||(31778656-31778814)
chr3 (153-302)||(37727314-37727472)
chr3 (153-302)||(43973824-43973982)
chr3 (150-282)||(25612382-25612522)
chr3 (153-302)||(17464494-17464652)
chr3 (153-302)||(20840945-20841103)
chr3 (153-302)||(39555581-39555739)
chr3 (148-302)||(25853232-25853395)
chr3 (153-302)||(4275748-4275906)
chr3 (150-268)||(32534959-32535085)
chr3 (153-304)||(29801798-29801958)
chr3 (198-302)||(22424870-22424975)
chr3 (150-302)||(26837360-26837521)
chr3 (146-263)||(29801352-29801477)
chr3 (192-302)||(26274617-26274728)
chr3 (143-302)||(30098147-30098315)
chr3 (153-302)||(5137365-5137523)
chr3 (153-302)||(23644849-23645007)
chr3 (153-281)||(23228414-23228549)
chr3 (196-283)||(32697105-32697191)
chr3 (153-282)||(37220560-37220697)
chr3 (192-302)||(24300606-24300717)
chr3 (195-282)||(50116814-50116901)
chr3 (198-302)||(41047083-41047187)
chr3 (196-280)||(25420548-25420632)
chr3 (153-280)||(45965941-45966076)
chr3 (195-282)||(51474738-51474826)
chr3 (196-270)||(18010162-18010236)
chr3 (153-256)||(51473431-51473542)
chr3 (205-282)||(23227319-23227396)
chr3 (194-282)||(25419196-25419284)
chr3 (258-309)||(29801532-29801583)
chr3 (153-280)||(37221976-37222113)
chr3 (247-311)||(55192222-55192286)
chr3 (272-311)||(49407925-49407964)
chr3 (200-269)||(32695761-32695830)
chr3 (272-312)||(27200068-27200108)
chr3 (235-311)||(37075781-37075857)
[»] scaffold0295 (2 HSPs)
scaffold0295 (153-311)||(4796-4962)
scaffold0295 (153-256)||(5222-5333)
[»] chr6 (34 HSPs)
chr6 (153-311)||(10900306-10900472)
chr6 (153-311)||(11276958-11277124)
chr6 (153-311)||(20741103-20741269)
chr6 (153-310)||(18257140-18257305)
chr6 (153-311)||(15828017-15828183)
chr6 (194-312)||(31470691-31470809)
chr6 (153-317)||(18505288-18505461)
chr6 (152-317)||(10899941-10900115)
chr6 (153-311)||(11444990-11445156)
chr6 (153-311)||(12935533-12935699)
chr6 (153-311)||(28472640-28472805)
chr6 (153-311)||(29859829-29859994)
chr6 (153-302)||(2319675-2319832)
chr6 (144-311)||(1149807-1149983)
chr6 (151-311)||(2322595-2322762)
chr6 (153-302)||(12935160-12935318)
chr6 (153-302)||(11445371-11445529)
chr6 (153-302)||(22219737-22219895)
chr6 (153-309)||(23074002-23074155)
chr6 (153-302)||(23075512-23075670)
chr6 (153-305)||(4811375-4811535)
chr6 (192-317)||(11276640-11276766)
chr6 (151-302)||(18504920-18505080)
chr6 (153-302)||(18257521-18257679)
chr6 (195-282)||(18296198-18296284)
chr6 (153-302)||(20741485-20741646)
chr6 (153-282)||(29033437-29033575)
chr6 (153-302)||(31470318-31470476)
chr6 (145-278)||(3835135-3835276)
chr6 (195-282)||(29035042-29035129)
chr6 (200-268)||(4811675-4811743)
chr6 (153-268)||(15827641-15827766)
chr6 (153-230)||(1149468-1149553)
chr6 (235-311)||(35163563-35163639)
[»] scaffold0951 (2 HSPs)
scaffold0951 (153-311)||(1670-1836)
scaffold0951 (153-302)||(2051-2209)
[»] scaffold0273 (2 HSPs)
scaffold0273 (153-311)||(4583-4749)
scaffold0273 (192-302)||(4253-4364)
[»] scaffold0019 (1 HSPs)
scaffold0019 (153-311)||(134049-134215)
[»] scaffold0007 (3 HSPs)
scaffold0007 (153-311)||(64305-64471)
scaffold0007 (150-257)||(64735-64850)
scaffold0007 (272-311)||(205745-205784)
[»] scaffold1223 (2 HSPs)
scaffold1223 (153-312)||(756-922)
scaffold1223 (153-317)||(1110-1283)
[»] scaffold0027 (2 HSPs)
scaffold0027 (153-311)||(42535-42700)
scaffold0027 (150-317)||(42169-42345)
[»] scaffold0432 (2 HSPs)
scaffold0432 (153-311)||(10249-10414)
scaffold0432 (195-249)||(9985-10039)
[»] scaffold0417 (2 HSPs)
scaffold0417 (192-311)||(10671-10790)
scaffold0417 (148-268)||(11042-11170)
[»] scaffold0157 (2 HSPs)
scaffold0157 (210-311)||(16564-16665)
scaffold0157 (200-302)||(16880-16983)
[»] scaffold0176 (2 HSPs)
scaffold0176 (195-315)||(18888-19007)
scaffold0176 (153-239)||(19069-19163)
[»] scaffold0168 (1 HSPs)
scaffold0168 (192-282)||(7693-7783)
[»] scaffold1585 (1 HSPs)
scaffold1585 (153-282)||(570-707)
[»] scaffold0113 (1 HSPs)
scaffold0113 (195-268)||(28662-28735)
[»] scaffold0057 (1 HSPs)
scaffold0057 (151-282)||(61863-62002)
[»] scaffold0076 (1 HSPs)
scaffold0076 (148-245)||(8451-8556)
[»] scaffold1696 (1 HSPs)
scaffold1696 (199-282)||(506-588)


Alignment Details
Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 150 - 311
Target Start/End: Original strand, 11090521 - 11090690
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11090521 ggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 11090620  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11090621 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 11090690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 146 - 311
Target Start/End: Original strand, 43058329 - 43058502
Alignment:
Q  146 atatggtttaattacacttttggtcctcgtgttttggtcttctcact--------cctgcccttttaaaacagaacaaaacggtccttcaattataattt 237  Q
    |||||| ||||||||||||||| |||||||||||||| |  ||||||        |||||| ||||||||||||||||||||||||||||||||| ||||    
T  43058329 atatggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattt 43058428  T
Q  238 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43058429 ttgttgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 43058502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 150 - 310
Target Start/End: Complemental strand, 40815890 - 40815722
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || |||||        |  |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  40815890 ggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttgt 40815791  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 310  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40815790 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 40815722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 153 - 317
Target Start/End: Original strand, 239356 - 239528
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||| ||||||||||| || |||||        ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  239356 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 239454  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagaccta-cccctatgct 317  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  239455 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 152 - 315
Target Start/End: Complemental strand, 8425903 - 8425732
Alignment:
Q  152 tttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttg 243  Q
    |||||||||||||||||| || |||||||||||| |||||        |||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  8425903 tttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttg 8425804  T
Q  244 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccctatg 315  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8425803 catttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccctatg 8425732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 307
Target Start/End: Original strand, 22374323 - 22374485
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22374323 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374422  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 307  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  22374423 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagaccta 22374485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 40027143 - 40027309
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||| ||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40027143 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 40027242  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40027243 attttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 40027309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 1978111 - 1978277
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||| |||||||||| ||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1978111 ttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1978210  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1978211 attttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 1978277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 18451373 - 18451207
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || || ||        ||||||||||||||||||||||||||  ||||||||| ||| |||||||||||    
T  18451373 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgttgc 18451274  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18451273 atttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 18451207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 150 - 311
Target Start/End: Original strand, 14432142 - 14432311
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || ||||         || ||||||||||||| | |||||||||||||||||| ||| ||||||||    
T  14432142 ggtttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgt 14432241  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14432242 tgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 14432311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 153 - 315
Target Start/End: Complemental strand, 26538621 - 26538450
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  26538621 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26538522  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccctatg 315  Q
    |||||||||||||||||||||||| |  | ||| ||||| ||||||||||||||||||||||||||||||||    
T  26538521 atttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccctatg 26538450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 307
Target Start/End: Original strand, 26538100 - 26538262
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||  | |||||        | ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  26538100 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttgttgc 26538199  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 307  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  26538200 atttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagaccta 26538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 28616616 - 28616783
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28616616 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 28616715  T
Q  245 atttttcgtcctaccccccattttattctcc-aaaaacgtagagaaatgacagttttagacctacccc 311  Q
    | ||||||||||||||||||||||||| ||| ||||||| ||||||||  ||||||||||||||||||    
T  28616716 aattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctacccc 28616783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 150 - 311
Target Start/End: Original strand, 3025466 - 3025634
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||| |||||| |||||||||||||||||||| || |||||        |||||| |||||||||||||||||||||||||||||| ||| ||||||||    
T  3025466 ggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgt 3025565  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||| |||||||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  3025566 tgcatttttcgtccta-cccccattttattctcaaaaaacgcaaagaaatgacagttttagacctacccc 3025634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 153 - 298
Target Start/End: Original strand, 7446345 - 7446497
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||| ||||||||||||||||| ||||         ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  7446345 ttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttattgc 7446444  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtt 298  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  7446445 atttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 20444752 - 20444889
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| |  |||||        |||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  20444752 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgttgc 20444851  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacg 282  Q
    | |||||||||||||||||||||||| |||||||||||    
T  20444852 agttttcgtcctaccccccattttatcctccaaaaacg 20444889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 7446841 - 7446730
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaa 290  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |  ||||||||||| |||||||    
T  7446841 tcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaa 7446742  T
Q  291 tgacagttttag 302  Q
    ||||||||||||    
T  7446741 tgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 150 - 302
Target Start/End: Complemental strand, 40027685 - 40027524
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  40027685 ggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgt 40027586  T
Q  242 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| || |||||| |||||||||    
T  40027585 tgcatttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 18450833 - 18450991
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  18450833 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttttttgc 18450932  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||| |||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  18450933 atttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 22374867 - 22374709
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22374867 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374768  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||| | ||| | |||||||||||||||||||    
T  22374767 atttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 40815348 - 40815506
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || ||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  40815348 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttgc 40815447  T
Q  245 atttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || | |||||  ||||| ||||| |||||||||||||||||||    
T  40815448 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 35781205 - 35781068
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||| |||||||||||||| || |||||        || ||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  35781205 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttgc 35781106  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  35781105 atttttcgtcctaacccccattttatcctccaaaaacg 35781068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 282
Target Start/End: Original strand, 35779694 - 35779848
Alignment:
Q  137 catgttaaaatat-ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttca 227  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||   | |||||        ||||||| ||||||||||||||||||  ||||||||    
T  35779694 catgttataatattggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttca 35779793  T
Q  228 attataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  35779794 attatcatttttgttgcattttttgtcctaccccccattttatcctccaaaaacg 35779848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 157 - 302
Target Start/End: Complemental strand, 239890 - 239736
Alignment:
Q  157 ttacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcattt 248  Q
    |||||||||||||||||||||||||| || |||||        |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||    
T  239890 ttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcgttt 239791  T
Q  249 ttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||| |||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  239790 ttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 28847237 - 28847123
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||| ||||||||||||||||||||||| |||||        |||||| ||||||||||| |||||||||||||||||||||| |||||||||||    
T  28847237 ttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 28847138  T
Q  245 atttttcgtcctacc 259  Q
    |||||||||||||||    
T  28847137 atttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 20440573 - 20440437
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| |  |||||        ||||||||||||||||||||||||||||||| |||| |||| |||||||||||    
T  20440573 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgttgc 20440474  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacg 282  Q
    | ||||||||||| |||||| ||||| |||||||||||    
T  20440473 agttttcgtcctatccccca-tttatcctccaaaaacg 20440437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 1978651 - 1978528
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||| ||||||||| || |||||        ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  1978651 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgc 1978552  T
Q  245 atttttcgtcctaccccccatttt 268  Q
    |||||| |||||||| || |||||    
T  1978551 attttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 11091062 - 11090904
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| ||| ||||||     
T  11091062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattgttgt 11090963  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||| | || ||||| |  ||||| ||||| ||| |||||||| ||||||    
T  11090962 atttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 28617156 - 28616998
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        | ||| |||||||||||||||||||| |||||||||||||| |||||||||||    
T  28617156 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 28617057  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||| |||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  28617056 atttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 43058874 - 43058717
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||| |||||||||||||| || |||||        |||||| ||||||||||||||||||| |||||||||||||| | |||||||||    
T  43058874 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttttgttgc 43058776  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  43058775 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 3025955 - 3025848
Alignment:
Q  194 ctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatg 292  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||    
T  3025955 ctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatg 3025857  T
Q  293 acagtttta 301  Q
    |||||||||    
T  3025856 acagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 8972240 - 8972377
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||  | |||||        || |||||||| ||||||||||||||  ||| ||||||||| |||||||||||    
T  8972240 ttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttgc 8972339  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||| |||||||| ||||||| |||||||||||    
T  8972340 atttttcgttctaccccctattttatcctccaaaaacg 8972377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 15551502 - 15551639
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||| | |||||        || |||| |||||||||| |||||||  |||||||| |||| |||||||||||    
T  15551502 ttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttgc 15551601  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||||| |||| ||||||||| |||||||||||    
T  15551602 atttttcgtccaaccctccattttatcctccaaaaacg 15551639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 301
Target Start/End: Original strand, 8425357 - 8425514
Alignment:
Q  152 tttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttg 243  Q
    ||||||||||||||||||||| ||||||||| || |||||        || | || ||||||||||||||||||||||| ||||||||| |||| |||||    
T  8425357 tttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttg 8425455  T
Q  244 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 301  Q
    |||||||||||||||| || ||||| |  ||||| ||| | ||||||||||||||||||    
T  8425456 catttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 15552545 - 15552458
Alignment:
Q  196 gcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgt 283  Q
    ||||||||||||||||||||||  ||| ||||||||| |||||||||| |||||||||||||||| |||||||   ||||||||||||    
T  15552545 gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttgtatttttcgtcctaccctccattttgccctccaaaaacgt 15552458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 14432683 - 14432525
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||| |||||||||||||||||||| || ||||         || |||| ||||||||||||| |||| ||| |||||||||| |||||||||||    
T  14432683 ttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttgc 14432584  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||| ||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  14432583 atttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 311
Target Start/End: Complemental strand, 28143446 - 28143407
Alignment:
Q  272 ctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  28143446 ctccagaaacgcagagaaatgacagttttagacctacccc 28143407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 2865297 - 2865131
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  2865297 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 2865198  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865197 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 2865131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 153 - 309
Target Start/End: Complemental strand, 29455284 - 29455120
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||| |||||||||||||||||||||| |||||        |||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  29455284 ttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 29455185  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29455184 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacc 29455120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 148 - 310
Target Start/End: Original strand, 8647436 - 8647606
Alignment:
Q  148 atggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattttt 239  Q
    |||| |||||||||||||||||||||||||||||| || |||||        ||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  8647436 atggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcattttt 8647535  T
Q  240 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 310  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8647536 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 8647606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 18183511 - 18183345
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18183511 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183412  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  18183411 atttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 18183345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 146 - 311
Target Start/End: Original strand, 19359132 - 19359305
Alignment:
Q  146 atatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattt 237  Q
    |||||| ||||||||||||||||||||| |||||||| || |||||        |||||||||||||||| |||||||||||||||||||||||| ||||    
T  19359132 atatggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattt 19359231  T
Q  238 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  19359232 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctacccc 19359305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 5819471 - 5819305
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  5819471 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 5819372  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  5819371 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctacccc 5819305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 14215785 - 14215619
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||| |||||||||||||||||||  || |||||        ||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  14215785 ttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 14215686  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14215685 atttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 14215619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 195 - 311
Target Start/End: Complemental strand, 164683 - 164567
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgac 294  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  164683 tgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgac 164584  T
Q  295 agttttagacctacccc 311  Q
    |||||||||||||||||    
T  164583 agttttagacctacccc 164567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 24362378 - 24362205
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||| |||||| || |||||        ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||    
T  24362378 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgttgc 24362279  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagaccta-cccctatgct 317  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||    
T  24362278 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 192 - 311
Target Start/End: Original strand, 8460980 - 8461099
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaat 291  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||    
T  8460980 tcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaat 8461079  T
Q  292 gacagttttagacctacccc 311  Q
    ||||||||||||||||||||    
T  8461080 gacagttttagacctacccc 8461099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 150 - 309
Target Start/End: Complemental strand, 15372418 - 15372251
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  15372418 ggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 15372319  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 309  Q
    ||||||||| || ||||  ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  15372318 tgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacc 15372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 15708974 - 15709139
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||| ||||||||| || |||||        |  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15708974 ttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15709073  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    || |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15709074 atatttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15709139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 195 - 309
Target Start/End: Original strand, 25000143 - 25000257
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgac 294  Q
    |||||| ||||||||||| |||| ||||||| |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25000143 tgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctaccccccattttattctccaaaaacgtagagaaatgac 25000242  T
Q  295 agttttagacctacc 309  Q
    ||||||||| |||||    
T  25000243 agttttagatctacc 25000257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 19359678 - 19359520
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  19359678 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgg 19359579  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  19359578 atttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 150 - 302
Target Start/End: Original strand, 5818929 - 5819090
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  5818929 ggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgt 5819028  T
Q  242 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||| |||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5819029 tgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 150 - 302
Target Start/End: Original strand, 18182970 - 18183131
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||| ||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  18182970 ggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 18183069  T
Q  242 tgcatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||| || | |||||| | ||| ||||| |||||||||||||||||||    
T  18183070 tgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 24332049 - 24331929
Alignment:
Q  200 ttttaaaacagaacaaaacggtccttcaattataattttt-gttgcattttt-cgtcctaccccccattttattctccaaaaacgtagagaaatgacagt 297  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  24332049 ttttaaaacagaacaaaacggtcctgcaattatcattttttgttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagt 24331950  T
Q  298 tttagaccta-cccctatgct 317  Q
    |||||||||| ||||||||||    
T  24331949 tttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 24361890 - 24361997
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgac 294  Q
    ||||||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||     
T  24361890 tgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatttttcgtcctaccccccattttattctccacaaacgcagagaaatgat 24361989  T
Q  295 agttttag 302  Q
    ||||||||    
T  24361990 agttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 8647980 - 8647822
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8647980 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 8647881  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||| ||||  | ||||| |  ||||| ||||| |||||||||||||||||||    
T  8647880 atttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 198 - 307
Target Start/End: Complemental strand, 14464009 - 14463901
Alignment:
Q  198 ccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagt 297  Q
    |||||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  14464009 ccttttaaaatagaacaaaacgatccttcaattatcatttttattgcatttttcgtccta-ccccaattttattctccaaaaacgcagagaaatgacagt 14463911  T
Q  298 tttagaccta 307  Q
    ||||||||||    
T  14463910 tttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 16018592 - 16018756
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||| ||||||||||| ||  ||||        || ||||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  16018592 ttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattata-tttttattgc 16018690  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||| ||||||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  16018691 attttccgtcctacccc-cattttattctccaaaaatatagaaaaatgacagttttagacctacccc 16018756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 24325265 - 24325372
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgac 294  Q
    ||||||| ||||||||||||||| |||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||     
T  24325265 tgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatttttcgtcctaccccccattttattctccacaaacgcagagaaatgat 24325364  T
Q  295 agttttag 302  Q
    ||||||||    
T  24325365 agttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 2864757 - 2864915
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||| ||||||||| || |||||        || ||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  2864757 ttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 2864856  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  2864857 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 8461473 - 8461315
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||| |||||||||||||||||||||||||||||||||| ||||||| |||    
T  8461473 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgctgc 8461374  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||| |||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  8461373 atttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 24331562 - 24331722
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaatta--taatttttgtt 242  Q
    ||||||||||||||||||||||||||||| ||| |||||        ||||||||||||||||||||||||||||||||||||||||  || ||||||||    
T  24331562 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttttgtt 24331661  T
Q  243 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||| ||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  24331662 gcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 7349564 - 7349422
Alignment:
Q  148 atggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattttt 239  Q
    |||| ||||||||||||||||||||||||||||||||| |||||        |||||| ||||||||||| ||||||||  ||||||| |||| ||||||    
T  7349564 atggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcattttt 7349465  T
Q  240 gttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||||| ||||| |||||||||||||||| | |||||||||||    
T  7349464 gttgcacttttcatcctaccccccattttttcctccaaaaacg 7349422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 15371874 - 15371983
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac-------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgca 245  Q
    ||||||||||||||| ||||||| ||||||||| |||||       |||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  15371874 ttaattacacttttgatcctcgtattttggtctactcacgaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgca 15371973  T
Q  246 tttttcgtcc 255  Q
    ||||||||||    
T  15371974 tttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 302
Target Start/End: Original strand, 14215296 - 14215402
Alignment:
Q  197 cccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgaca 295  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||    
T  14215296 cccttttaaaacagaacaaaaaggtccttcagttatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaca 14215395  T
Q  296 gttttag 302  Q
    |||||||    
T  14215396 gttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 199 - 304
Target Start/End: Complemental strand, 25000577 - 25000471
Alignment:
Q  199 cttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagt 297  Q
    ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||| ||| || ||||| |  ||||||||||| ||||||||||||||    
T  25000577 cttttaaaacagaacaaaatggtcattcaattatcatttttgttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagt 25000478  T
Q  298 tttagac 304  Q
    |||||||    
T  25000477 tttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 29454793 - 29454901
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatga 293  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| || ||||| |  ||||| ||||| ||||||||||    
T  29454793 tgcccttttaaaacagaacaaaacggtccttgaattatcatttttgctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatga 29454892  T
Q  294 cagttttag 302  Q
     ||||||||    
T  29454893 tagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 16019132 - 16018969
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    |||||||||||||||||||||||| ||||||||  | |||||        |||||| ||||||||| |||| |||| ||| |||||||||| ||||||||    
T  16019132 ggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgt 16019033  T
Q  242 tgcatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttagac 304  Q
    || ||||||||||||||| || | |||||  ||||| ||||| |||||||||||||||||||||    
T  16019032 tgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 153 - 301
Target Start/End: Original strand, 164194 - 164350
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||  || |||||        ||||||||||||| |||| |||||||||||| ||||||||| | |||||||||    
T  164194 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgttgc 164292  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 301  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| |||||    
T  164293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 4222264 - 4222147
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| ||||||||        || |||||||||||||||||||||||  ||| |||| |||| |||||| ||||    
T  4222264 ttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttattgc 4222165  T
Q  245 atttttcgtcctaccccc 262  Q
    ||||||||||||||||||    
T  4222164 atttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 268
Target Start/End: Original strand, 7348555 - 7348685
Alignment:
Q  146 atatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattt 237  Q
    |||||| ||||||||| ||||||||||| |||||| |||| |||||        || ||||||||||||||||||||||||  ||||||  |||| ||||    
T  7348555 atatggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcattt 7348654  T
Q  238 ttgttgcatttttcgtcctaccccccatttt 268  Q
    |||||||| ||||||||||||||||||||||    
T  7348655 ttgttgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 6019259 - 6019177
Alignment:
Q  199 cttttaaaacagaacaaaacggtccttcaattataatttttgttgcat-ttttcgtcctaccccccattttattctccaaaaa 280  Q
    |||||||||||||||||||| ||| || |||||| ||||||||||||| ||||||||||||| |||||||||| |||||||||    
T  6019259 cttttaaaacagaacaaaactgtcttttaattatcatttttgttgcattttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 302
Target Start/End: Complemental strand, 15709455 - 15709353
Alignment:
Q  201 tttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttt 299  Q
    ||||||||||||||||||||||||| | |||| |||| ||||||||||||||||||||| || ||||| |  ||||| || || ||||||||||||||||    
T  15709455 tttaaaacagaacaaaacggtcctttagttatcatttctgttgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttt 15709356  T
Q  300 tag 302  Q
    |||    
T  15709355 tag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 4624711 - 4624631
Alignment:
Q  201 tttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaac 281  Q
    ||||||||| ||||||||  || ||||||||| |||| |||||||||||||||||||||||||||||||| || |||||||    
T  4624711 tttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 4219716 - 4219800
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaa 280  Q
    |||| |||||||||||||||||   |||||| | |||| |||||||||||||||||||||||| |||||||||||| |||||||||    
T  4219716 tgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttgcatttttcgtccta-cccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 4623198 - 4623287
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgt 283  Q
    |||||||  |||||||||||||||||  ||||||||||||| |||||| | ||||||| |||||||  ||||||||||| ||||||||||||    
T  4623198 tcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttatggcattttccgtccta--ccccattttatcctccaaaaacgt 4623287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 282
Target Start/End: Complemental strand, 13814226 - 13814133
Alignment:
Q  193 cctgcccttttaaaacagaacaaaacggtcct-----tcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||||||||||||| ||||||||||| ||| |     |||||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctac-ccccattttatcctccaaaaacg 13814133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 302
Target Start/End: Original strand, 14462686 - 14462769
Alignment:
Q  224 ttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctc----caaaaacgtagagaaatgacagttttag 302  Q
    ||||||||| |||||||||||||||||||||||||| || ||||| |  |||    || |||||||||||||||||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttag 14462769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 6018370 - 6018452
Alignment:
Q  198 ccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaac 281  Q
    ||||||||||||||||||||   || ||||||||| |||||||||||| |||| ||||||||| | |||||   ||||||||||    
T  6018370 ccttttaaaacagaacaaaattatc-ttcaattatcatttttgttgcagttttagtcctaccctctattttcacctccaaaaac 6018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 14340823 - 14340793
Alignment:
Q  272 ctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||||||||||||||||    
T  14340823 ctccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 302
Target Start/End: Original strand, 10721884 - 10721945
Alignment:
Q  241 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||| |||| |||||||| || |||||   ||||| |||||||||||||||||||||||||    
T  10721884 ttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 182
Target Start/End: Original strand, 14215244 - 14215273
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttgg 182  Q
    ||||||||||||||||||||||||||||||    
T  14215244 ttaattacacttttggtcctcgtgttttgg 14215273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 6e-62; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 150 - 311
Target Start/End: Original strand, 19830420 - 19830589
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  19830420 ggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19830519  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19830520 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 19830589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 150 - 311
Target Start/End: Complemental strand, 29100396 - 29100227
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    |||||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29100396 ggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgt 29100297  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  29100296 tgcattttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctacccc 29100227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 19590528 - 19590694
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19590528 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590627  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  19590628 atttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctacccc 19590694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 37786770 - 37786936
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || || ||        |||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  37786770 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 37786869  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37786870 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 37786936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 195 - 311
Target Start/End: Complemental strand, 2659332 - 2659216
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgac 294  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  2659332 tgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgac 2659233  T
Q  295 agttttagacctacccc 311  Q
    |||||||||||||||||    
T  2659232 agttttagacctacccc 2659216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 156 - 317
Target Start/End: Complemental strand, 23953268 - 23953099
Alignment:
Q  156 attacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatt 247  Q
    |||||| ||||||||||||||||||| ||| |||||        ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  248 tttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccctatgct 317  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccctatgct 23953099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 153 - 310
Target Start/End: Original strand, 38858646 - 38858811
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||| ||||||||||||||||||||||||  | |||||        |||||| |||||||||||||||||||||||| ||||||||| |||||||||||    
T  38858646 ttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 38858745  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 310  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38858746 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 38858811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 153 - 309
Target Start/End: Complemental strand, 34534333 - 34534169
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||| ||||||||| |||||||||||| || |||||        |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  34534333 ttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgttgc 34534234  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 309  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  34534233 atttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctacc 34534169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 32005156 - 32004990
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||| ||||||||  | |||||        || ||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  32005156 ttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttgc 32005057  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32005056 atttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 32004990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 35289443 - 35289277
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||| |||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  35289443 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggttgc 35289344  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||| | |||||||||||||||||    
T  35289343 atttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctacccc 35289277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 150 - 311
Target Start/End: Original strand, 4641440 - 4641609
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    |||||||||||||||||||||||||||||||||  | |||||        |||||| ||||| ||||| |||||||||||| ||||||||| ||||||||    
T  4641440 ggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgt 4641539  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||    
T  4641540 tgcatttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgcccc 4641609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 150 - 317
Target Start/End: Complemental strand, 4478245 - 4478070
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||| |||||||||| |||||||||||||| || |||||        ||||||||||||||||||||| || |  ||||||||||||| ||||||||    
T  4478245 ggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgt 4478146  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccctatgct 317  Q
    ||||||||||||| || ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  4478145 tgcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccctatgct 4478070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 19591067 - 19590909
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||| |||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19591067 ttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590968  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  19590967 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 38859183 - 38859025
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  38859183 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgc 38859084  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  38859083 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 153 - 301
Target Start/End: Original strand, 32004617 - 32004774
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  32004617 ttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 32004716  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 301  Q
    |||||||| |||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  32004717 atttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 38160954 - 38161091
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||| ||||||| || |||||        ||||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  38160954 ttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttgttgc 38161053  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  38161054 atttttcgtcctactccccattttatcctccaaaaacg 38161091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac-----tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatt 247  Q
    |||||||||||||||||||||||||||||| || |||||     ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||     
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcacactggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcata 4641884  T
Q  248 tttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||  || ||||| |  ||| | ||||| |||||||||||||||||||    
T  4641883 tttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 29099900 - 29100011
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaa 290  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |  | ||| ||||||||| |||    
T  29099900 tcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgtagataaa 29099999  T
Q  291 tgacagttttag 302  Q
    ||||||||||||    
T  29100000 tgacagttttag 29100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 2658842 - 2659000
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||| ||||||||||||||| || |||||        |||||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  2658842 ttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 2658941  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||| |||| || ||||| |  ||||||||||| ||||||||| |||||||||    
T  2658942 atttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 300
Target Start/End: Complemental strand, 37787309 - 37787153
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||| |||||||||||||||||||||| || |||||        |||||| |||||||| |||||||||||||| |||||||||| |||||||||||    
T  37787309 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgttgc 37787210  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttt 300  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||    
T  37787209 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 153 - 280
Target Start/End: Original strand, 28583442 - 28583577
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || ||||         | |||||||||||||||| || ||||| ||||||||||||| |||||| ||||    
T  28583442 ttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttattgc 28583541  T
Q  245 atttttcgtcctaccccccattttattctccaaaaa 280  Q
    |||||||||||||||||||||||||| |||||||||    
T  28583542 atttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 19830961 - 19830804
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||| |||||||||||| ||||||||||| |||||||||| |||||||||||    
T  19830961 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttgttgc 19830862  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||| |||||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  19830861 attttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 34533794 - 34533952
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || ||| |||||||||||||| |||| |||| ||||||||| |||||||||||    
T  34533794 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgttgc 34533893  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||| ||||||||| || ||||| |  ||||||||||| |||||||||||| ||||||    
T  34533894 attttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 28584411 - 28584327
Alignment:
Q  198 ccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||| ||||||||||||||| |||||||||||    
T  28584411 ccttttaaaacagaacaaaattgtccttcaattatcatttttgttgtatttttcgtcttaccccccattttatcctccaaaaacg 28584327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 35288906 - 35289019
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||| |||| |||||| || |||||        |||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  35288906 ttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 35289005  T
Q  245 atttttcgtcctac 258  Q
    ||||||||||||||    
T  35289006 atttttcgtcctac 35289019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 23952784 - 23952848
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctacc 259  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  23952784 tgcccttttaaaacagaacaaaacggtccttcaattatcattttggttgcatttttcgtcctacc 23952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 32427432 - 32427393
Alignment:
Q  276 aaaaacgtagagaaatgacagttttagacctacccctatg 315  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  32427432 aaaaacgcagagaaatgacagttttagacctacccctatg 32427393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 181
Target Start/End: Original strand, 23952733 - 23952761
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttg 181  Q
    |||||||||||||||||||||||||||||    
T  23952733 ttaattacacttttggtcctcgtgttttg 23952761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 6e-62; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 153 - 317
Target Start/End: Original strand, 18984122 - 18984295
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18984122 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18984221  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacct-acccctatgct 317  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||    
T  18984222 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 5540360 - 5540188
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||| ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  5540360 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttgttgc 5540261  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccctatgct 317  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5540260 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccctatgct 5540188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 147 - 317
Target Start/End: Original strand, 29306950 - 29307128
Alignment:
Q  147 tatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttt 238  Q
    ||||| ||||||||||||||| |||||||||||||| || |||||        || || ||||||||||||||||||||||||||||||||||| |||||    
T  29306950 tatggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttt 29307049  T
Q  239 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccctatgct 317  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29307050 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccctatgct 29307128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 50970820 - 50970654
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || || ||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  50970820 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 50970721  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50970720 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 50970654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 15646737 - 15646571
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  15646737 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15646638  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15646637 atttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 150 - 311
Target Start/End: Original strand, 15173096 - 15173265
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || |||||        ||||||||||||||||  |||||||||||| |||||||||| ||||||||    
T  15173096 ggtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgt 15173195  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15173196 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15173265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 143 - 311
Target Start/End: Original strand, 29869613 - 29869789
Alignment:
Q  143 aaaatatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataa 234  Q
    |||||| || ||||||||||||||||||||||||||||||  | |||||        || |||||||||||||||||||||||||||||||||||||| |    
T  29869613 aaaataaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatta 29869712  T
Q  235 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29869713 tttttgttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29869789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 150 - 311
Target Start/End: Complemental strand, 5963123 - 5962954
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || |||||        || ||||||||||||| |||||||||| ||| ||||||||| ||||||||    
T  5963123 ggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgt 5963024  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5963023 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5962954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 153 - 310
Target Start/End: Complemental strand, 33144461 - 33144296
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||||||||||||||||||||||| || ||||||| ||| |||||||||||    
T  33144461 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttgc 33144362  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 310  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33144361 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 33144296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 21856585 - 21856419
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || ||||         ||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||    
T  21856585 ttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctgc 21856486  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21856485 atttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 21856419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 195 - 317
Target Start/End: Original strand, 17433269 - 17433392
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgac 294  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  17433269 tgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgac 17433368  T
Q  295 agttttagaccta-cccctatgct 317  Q
    ||||||||||||| ||||||||||    
T  17433369 agttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 8679083 - 8678918
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  8679083 ttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgttgc 8678984  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||| || ||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  8678983 atttttcgtccta-cctccattttattctccaaaaatgcagagaaatgacagttttagacctacccc 8678918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 153 - 309
Target Start/End: Complemental strand, 26859601 - 26859438
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||| |||||||||||||| || |||||        |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  26859601 ttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgttgc 26859502  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 309  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||||    
T  26859501 atttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacc 26859438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 29307484 - 29307311
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||| ||||||||||||||||||||||  || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29307484 ttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307385  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccctatgct 317  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  29307384 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccctatgct 29307311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 17112095 - 17112219
Alignment:
Q  19 tattattattgaaataaataaatgatatgattgttattgtatgtttgtctaaatgcaaaataattacgtgtgtcaccaagcaagtcttggcattattaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||| |      |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17112095 tattattattgaaataaatgaatgatatgattgttattgtattt------aaatgcaaaataattacgtgtgtcaccaagtaagtcttggcattattaga 17112188  T
Q  119 gatataatagaatgactacatgttaaaatat 149  Q
    ||||||||||||||||||||| |||||||||    
T  17112189 gatataatagaatgactacatattaaaatat 17112219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 195 - 317
Target Start/End: Original strand, 39154072 - 39154195
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgac 294  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||    
T  39154072 tgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttgcatttttcgtcctaccccccattctattctccaaaaacgcatagaaatgac 39154171  T
Q  295 agttttagaccta-cccctatgct 317  Q
    ||||||||||| | ||||||||||    
T  39154172 agttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 9018976 - 9019142
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || || ||        | ||||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  9018976 ttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgttgc 9019075  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||| |||||||    
T  9019076 atttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctacccc 9019142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 4636033 - 4636141
Alignment:
Q  202 ttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtttta 301  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||| || ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  302 gacctacccc 311  Q
    ||||||||||    
T  4636132 gacctacccc 4636141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 21856045 - 21856203
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||| ||| |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21856045 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 21856144  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||| ||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  21856145 atttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 153 - 304
Target Start/End: Complemental strand, 17433757 - 17433597
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||| ||| || |||||        || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17433757 ttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17433658  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 304  Q
    ||||||||||||||| || ||||| |  || || ||||| |||||||||||||||||||||    
T  17433657 atttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 5539819 - 5539977
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  5539819 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 5539918  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| | ||||||| |||||||||    
T  5539919 atttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 301
Target Start/End: Complemental strand, 4636513 - 4636356
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  4636513 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 4636414  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 301  Q
    ||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| |||||    
T  4636413 atttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 9019505 - 9019332
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||  || |||||        | ||||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  9019505 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 9019406  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccctatgct 317  Q
    ||||||||||||||| || ||||| |  | ||| ||||| |||||||| |||||||||||||| ||||||||||    
T  9019405 atttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccctatgct 9019332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 153 - 300
Target Start/End: Original strand, 50970281 - 50970437
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||| |||||||| ||||||||||||||||||||||||| |||||||||||    
T  50970281 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgttgc 50970380  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttt 300  Q
    |||||||||||||||  | ||||| |  ||||| ||||| |||||||||||||||||    
T  50970381 atttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 18984661 - 18984538
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||| ||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18984661 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18984562  T
Q  245 atttttcgtcctaccccccatttt 268  Q
    ||||||||||||||| || |||||    
T  18984561 atttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 8678544 - 8678658
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  8678544 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 8678643  T
Q  245 atttttcgtcctacc 259  Q
    |||||||||||||||    
T  8678644 atttttcgtcctacc 8678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 15173635 - 15173478
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  15173635 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 15173537  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  15173536 atttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 29870161 - 29870003
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || ||||         ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  29870161 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29870062  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||  | ||||| |||||||||||||||||||    
T  29870061 atttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 158 - 302
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  158 tacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttt 249  Q
    ||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  250 tcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 52268293 - 52268430
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||| |||||| || |||||        ||||||||||||||||||||||||||| ||| |||| |||| |||||||||||    
T  52268293 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttgttgc 52268392  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacg 282  Q
    | |||||||||||||||||||||| | |||||||||||    
T  52268393 acttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 39154562 - 39154404
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||| ||||||||||| ||||||| |||||||||||||| |||||||||||    
T  39154562 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgc 39154463  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  || || ||||| |||||||||||| ||||||    
T  39154462 atttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 15646195 - 15646353
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||| |||||||||||||||||||||| || |||||        || ||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  15646195 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgttgc 15646294  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| |  ||||| |  ||||| ||| | |||||||||||||||||||    
T  15646295 atttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 26859062 - 26859176
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||| ||||||||| || || ||        ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  26859062 ttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26859161  T
Q  245 atttttcgtcctacc 259  Q
    |||||||||||||||    
T  26859162 atttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 5962581 - 5962739
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||| |||||||||||||||| ||||||  ||||        ||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  5962581 ttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgttgc 5962680  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||| ||||| || ||||| |  ||||| ||||  |||| ||||||||||||||    
T  5962681 atttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 302
Target Start/End: Original strand, 17112335 - 17112442
Alignment:
Q  196 gcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgac 294  Q
    |||||||||||| |||| ||||  ||||||||||||| |||||| ||||||||||||||||||| || ||||| |  ||||| ||||| ||| ||||||     
T  17112335 gcccttttaaaatagaataaaatagtccttcaattatcatttttattgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgat 17112434  T
Q  295 agttttag 302  Q
    ||||||||    
T  17112435 agttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 52269241 - 52269177
Alignment:
Q  194 ctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctac 258  Q
    ||||||||||||||||||||||||  ||| |||| |||| |||||||||||| ||||||||||||    
T  52269241 ctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttgcacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 2733452 - 2733416
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaa 228  Q
    |||||||||||||||||||||||||||||||||||||    
T  2733452 tcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 47826967 - 47827005
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac 191  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  47826967 ttaattacacttttggtcctcgtgttttggtctactcac 47827005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 47827080 - 47827033
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgtt 242  Q
    |||||||||||||||||||||||  |||||| |||||| |||||||||    
T  47827080 tgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 17088550 - 17088517
Alignment:
Q  278 aaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||| ||||||||||||||||||||||||||||    
T  17088550 aaacgcagagaaatgacagttttagacctacccc 17088517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 181
Target Start/End: Complemental strand, 52269290 - 52269262
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttg 181  Q
    |||||||||||||||||||||||||||||    
T  52269290 ttaattacacttttggtcctcgtgttttg 52269262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 3e-60; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 46193947 - 46193781
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  46193947 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 46193848  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46193847 atttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctacccc 46193781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 38962361 - 38962189
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||| |||||||||||||||||||||||  ||||        ||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38962361 ttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 38962262  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccctatgct 317  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  38962261 atttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccctatgct 38962189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 153 - 310
Target Start/End: Original strand, 33109687 - 33109852
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||| ||||||||||||||||||||  | |||||        |||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  33109687 ttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 33109786  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 310  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33109787 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 33109852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 192 - 311
Target Start/End: Original strand, 51020847 - 51020966
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaat 291  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51020847 tcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaat 51020946  T
Q  292 gacagttttagacctacccc 311  Q
    ||||||||||||||||||||    
T  51020947 gacagttttagacctacccc 51020966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 25447778 - 25447612
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||| ||||||||||| || |||||        ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  25447778 ttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 25447679  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  25447678 atttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctacccc 25447612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 153 - 309
Target Start/End: Original strand, 23494446 - 23494610
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||| |||||||||||||||||||| || |||||        ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  23494446 ttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattgc 23494545  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 309  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  23494546 atttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacc 23494610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 11153689 - 11153523
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||| |||||||||||||||||||| |||||||||||| |||||||||||    
T  11153689 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttgc 11153590  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  11153589 atttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttacccc 11153523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 15523776 - 15523610
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||| ||||||||||| || |||||        |||||||||||||||||| ||||||| |||||||||| ||| |||||||||||    
T  15523776 ttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttgttgc 15523677  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  15523676 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctacccc 15523610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 25937673 - 25937839
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||| |||||||||||||||||| | || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25937673 ttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25937772  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25937773 attttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 25937839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 192 - 311
Target Start/End: Original strand, 12234379 - 12234498
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaat 291  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12234379 tcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaat 12234478  T
Q  292 gacagttttagacctacccc 311  Q
     ||||||||| |||||||||    
T  12234479 aacagttttaaacctacccc 12234498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 22170478 - 22170313
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac-------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgca 245  Q
    |||||||||||||||||||||||||||||  || || ||       ||||||| |||||||||| |||||||||||| ||||||||| ||||||||||||    
T  22170478 ttaattacacttttggtcctcgtgttttgacctactgacgaaattgtcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttgttgca 22170379  T
Q  246 tttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  22170378 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtacccc 22170313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 153 - 317
Target Start/End: Original strand, 4219560 - 4219733
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||| |||||||||||||||||||| || |||||        ||||||| |||||||| | |||||||| ||||||||||||| |||||||||||    
T  4219560 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttgc 4219659  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagaccta-cccctatgct 317  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  4219660 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 150 - 311
Target Start/End: Complemental strand, 22434721 - 22434554
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    |||||||||||| |||||||||||||||||||| || |||||        ||||||| ||||||| ||||||||||||||| ||||||||| ||||||||    
T  22434721 ggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttttgt 22434623  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22434622 tgcatttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 22434554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 311
Target Start/End: Original strand, 45082432 - 45082599
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac-------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgtt 242  Q
    ||||||||||| ||||||||| |||||||||||||| |||||       |  ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  45082432 ggtttaattacgcttttggtcatcgtgttttggtctactcacgaactggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttgtt 45082531  T
Q  243 gcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||||||| |||||||||||||||    
T  45082532 gcatttttcgtccta-cccccattttattctccaaaaacacagagaaatgacaattttagacctacccc 45082599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 194 - 311
Target Start/End: Original strand, 48526248 - 48526364
Alignment:
Q  194 ctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatga 293  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||    
T  48526248 ctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtccta-cccccattttattctccaaaaatgcagagaaatga 48526346  T
Q  294 cagttttagacctacccc 311  Q
    |||||||||| |||||||    
T  48526347 cagttttagatctacccc 48526364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 150 - 317
Target Start/End: Complemental strand, 54995612 - 54995437
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || |||||        || ||||||||||||| |||||||||||||||||||| ||| ||||| ||    
T  54995612 ggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatcatttt-gt 54995514  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc-cctatgct 317  Q
    |||||||||||||||| |||||||||||||||| ||||||| | |||||||| ||||||||||||||| ||||||||    
T  54995513 tgcatttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 210 - 311
Target Start/End: Complemental strand, 12503913 - 12503812
Alignment:
Q  210 gaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 309  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  310 cc 311  Q
    ||    
T  12503813 cc 12503812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 150 - 311
Target Start/End: Complemental strand, 2118840 - 2118672
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||| ||||||||||| || ||||         ||||  |||||||||||| |||||||||||| ||||||||| ||||||||    
T  2118840 ggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgt 2118741  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  2118740 tgcatttttcgtcctac-ccccattttattctccaaaaacgcagagaaataatagttttagacctacccc 2118672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 148 - 304
Target Start/End: Original strand, 46193403 - 46193568
Alignment:
Q  148 atggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattttt 239  Q
    |||| |||||||||||||||||||||||||||||| || |||||        |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  46193403 atggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcattttt 46193502  T
Q  240 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 304  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||||    
T  46193503 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 150 - 302
Target Start/End: Original strand, 54995069 - 54995230
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    |||||||||||||||||||||||||||| |||| || |||||        |||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  54995069 ggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 54995168  T
Q  242 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  54995169 tgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 148 - 302
Target Start/End: Original strand, 25447245 - 25447408
Alignment:
Q  148 atggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattttt 239  Q
    |||| |||||||||||||||||||||||||||||| || ||||         ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25447245 atggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 25447344  T
Q  240 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  25447345 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 22434182 - 22434340
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||  | |||||        ||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  22434182 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 22434281  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  22434282 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 153 - 301
Target Start/End: Original strand, 15523238 - 15523395
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15523238 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttttttgc 15523337  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 301  Q
    ||||||||||||||| || ||||| |  ||| | ||||| ||||||||||||||||||    
T  15523338 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 150 - 302
Target Start/End: Complemental strand, 48526726 - 48526565
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    |||||||||| ||||||||||||||||||||||||| |||||        || |||||||||||||||||||||||||||||||||||||| | ||||||    
T  48526726 ggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgt 48526627  T
Q  242 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  48526626 tgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 147 - 302
Target Start/End: Complemental strand, 45082972 - 45082808
Alignment:
Q  147 tatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttt 238  Q
    ||||| ||||||||||||||||||||||||||||||  | |||||        || |||||||||||||||||||||||||||||||||||||| |||||    
T  45082972 tatggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 45082873  T
Q  239 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  45082872 tgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 150 - 302
Target Start/End: Complemental strand, 4220104 - 4219943
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || |||||        |||||| ||||||||||||||||||| |||| ||||||||| ||||||||    
T  4220104 ggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgt 4220005  T
Q  242 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||| || ||||| |  || |||||||| |||||||| ||||||||||    
T  4220004 tgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 23494985 - 23494872
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23494985 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 23494886  T
Q  245 atttttcgtcctac 258  Q
    ||||||||||||||    
T  23494885 atttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 148 - 302
Target Start/End: Complemental strand, 12234876 - 12234713
Alignment:
Q  148 atggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattttt 239  Q
    |||| ||||||| |||||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| ||||||    
T  12234876 atggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 12234777  T
Q  240 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||||| || ||||| |  | ||| ||| | |||||||||||||||||||    
T  12234776 gttgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 33110006 - 33109883
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||| |||||||| || |||||        |||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  33110006 ttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33109907  T
Q  245 atttttcgtcctaccccccatttt 268  Q
    ||||||||||||||| || |||||    
T  33109906 atttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 11153149 - 11153307
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||| |||||||||||||||||||||| || |||||        || ||||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  11153149 ttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgttgc 11153248  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  | ||| ||||| |||||||||||||||||||    
T  11153249 atttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 20471053 - 20470895
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || || ||        || | |||||||||||||||||||||||||| ||||||||| |||||||||||    
T  20471053 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 20470954  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  20470953 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 302
Target Start/End: Original strand, 18751599 - 18751760
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || ||||         || |||||||||||||||||||||||||||||||||| ||| ||||||||    
T  18751599 ggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgt 18751698  T
Q  242 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||| ||| || ||||| |  ||||| ||||| ||| ||||| |||||||||    
T  18751699 tgcatttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 44892641 - 44892553
Alignment:
Q  194 ctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||| ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||    
T  44892641 ctgccattttaaaacagaacaaaactgtctttcaattatattttttgttgcatttttcgtcctaccctccattttatcctccaaaaacg 44892553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 25938213 - 25938090
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||| ||||||||| || |||||        ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  25938213 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgc 25938114  T
Q  245 atttttcgtcctaccccccatttt 268  Q
    |||||| |||||||| || |||||    
T  25938113 attttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 48713834 - 48713751
Alignment:
Q  199 cttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  48713834 cttttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctcccctccattttatcctccaaaaacg 48713751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 2118296 - 2118419
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||| ||||||||| || |||||        |||||||||||||||||| |||||||  ||||||||||||| |||||||||||    
T  2118296 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttgc 2118395  T
Q  245 atttttcgtcctaccccccatttt 268  Q
    ||||||||||||||| || |||||    
T  2118396 atttttcgtcctacctcctatttt 2118419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 51021337 - 51021180
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||| |||||||||||||| || |||||        |||||||||||||||||| ||||||||||||||| |||||| | |||||||||    
T  51021337 ttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-ttttgttgc 51021239  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| || ||||||    
T  51021238 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 20958401 - 20958266
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||| |||||||| |||||| || |||||        |||||||||||||||||||||||||   ||||||||||||| |||||||||||    
T  20958401 ttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttgc 20958302  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||||| |||||| |||||||||||| |||||||||||    
T  20958301 attttt-gtccta-cccccattttatcctccaaaaacg 20958266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 12503494 - 12503597
Alignment:
Q  200 ttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtt 298  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||| ||||||    
T  12503494 ttttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaattacagtt 12503593  T
Q  299 ttag 302  Q
    ||||    
T  12503594 ttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 278
Target Start/End: Original strand, 16690936 - 16691072
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    |||||||||||| |||||||||| |||||||| ||| |||||        |||||||  ||||||||| |||||||   |||||||||||| ||||||||    
T  16690936 ggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgt 16691035  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaa 278  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  16691036 tgcatttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 43243772 - 43243686
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||||||||||||||||||||||  || |||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  43243772 tgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac-ccccattttatcctccaaaaacg 43243686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 43242328 - 43242410
Alignment:
Q  200 ttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||| || |||||||  ||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacg 43242410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 43281282 - 43281198
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaa 280  Q
    |||| ||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||    
T  43281282 tgccattttaaaacagaacaaaaatgttcttcaattata-tttttgttgcatttttcgtcctaccccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 48293597 - 48293734
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||  | |||||        ||||| |  ||||||||| |||||||  || |||||||||| |||||||||||    
T  48293597 ttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttgttgc 48293696  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||| |||| ||| |||||||||||||||||||||    
T  48293697 atttttcatcctgccctccattttattctccaaaaacg 48293734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 44890570 - 44890657
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||||||||||||||||||||||   ||||| ||||||| ||||||||||||||||| || ||||||||||||||| ||| |||||||    
T  44890570 tgcccttttaaaacagaacaaaaatatcctttaattatattttttgttgcatttttcatcataccccccattttatcctcaaaaaacg 44890657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 256
Target Start/End: Complemental strand, 18764062 - 18763951
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || || |||||||||||||||||||| |||| ||||| ||| |||||||||||    
T  18764062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttgc 18763963  T
Q  245 atttttcgtcct 256  Q
    ||||||||||||    
T  18763962 atttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 48708345 - 48708431
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaa 278  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| |  ||||||| | |||||||| |||||||    
T  48708345 tcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttgttgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 20957246 - 20957327
Alignment:
Q  199 cttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaa 280  Q
    ||||||||||| |||||||  ||||||||||||| | ||||||||||||||||||| ||| ||||||||||||||| |||||    
T  20957246 cttttaaaacacaacaaaattgtccttcaattatcaattttgttgcatttttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 48295029 - 48294947
Alignment:
Q  201 tttaaaacagaacaaaacggtccttcaattataatttttgttgcattttt-cgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||| |||||||  ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  48295029 tttaaaacacaacaaaattgtcattcaattatcatttttgttgcatttttccgtcctaccccccattttatcttccaaaaacg 48294947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 18752038 - 18751978
Alignment:
Q  251 cgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||| ||||||||||||||||| | |||||||| |||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctacccc 18751978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 44220861 - 44220782
Alignment:
Q  203 taaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||||||||||||||  |||||||| |||| ||||||||| |||||||||| |||||||  ||||||| |||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacg 44220782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 16691554 - 16691481
Alignment:
Q  205 aaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaa 278  Q
    ||||| |||||||  |||||| |||||| ||||||||||||||||||||| |||| |||||||||| |||||||    
T  16691554 aaacataacaaaattgtcctttaattattatttttgttgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 311
Target Start/End: Original strand, 17504072 - 17504142
Alignment:
Q  241 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||| |||| |||||||| || |||||   ||||| ||||||||||||||||||||||||||||||||||    
T  17504072 ttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctacccc 17504142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 35363143 - 35363028
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaa-caaaacggtccttcaattataatttttgttg 243  Q
    ||||||||||||||| |||||||||||||| || |||||        | |||| ||||||||| | || |||||||||| ||||||||| ||||||||||    
T  35363143 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttgttg 35363044  T
Q  244 catttttcgtcctacc 259  Q
    |||||||||| |||||    
T  35363043 catttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 10258429 - 10258306
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||| ||| || ||||         ||||||||||||||||||||  ||||  ||  ||||||||| |||||||||||    
T  10258429 ttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttgttgc 10258330  T
Q  245 atttttcgtcctaccccccatttt 268  Q
    | |||| ||| ||||||| |||||    
T  10258329 agttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 16318318 - 16318280
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac 191  Q
    |||||||||||||||||||||||||||||| || |||||    
T  16318318 ttaattacacttttggtcctcgtgttttggcctactcac 16318280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 17504369 - 17504336
Alignment:
Q  278 aaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||| ||||||||||||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctacccc 17504336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 35193443 - 35193476
Alignment:
Q  278 aaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||| ||||||||||||||||||||||||||||    
T  35193443 aaacgcagagaaatgacagttttagacctacccc 35193476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 19176832 - 19176659
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19176832 ttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19176733  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc-cctatgct 317  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  19176732 atttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 41681137 - 41681302
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41681137 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681236  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  41681237 atttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaaacatacccc 41681302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 150 - 311
Target Start/End: Original strand, 33328158 - 33328327
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||||| ||| ||||||||    
T  33328158 ggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 33328257  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||| | ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  33328258 tgcatttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctacccc 33328327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 153 - 309
Target Start/End: Original strand, 31133223 - 31133387
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||  || |||||        ||| |||||||||||||| |||||||| ||||||||| ||| |||||||||||    
T  31133223 ttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgttgc 31133322  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31133323 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 31133387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 12571866 - 12572033
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        | || |||||||||||||||||||||||||| ||||||||| |||||||||||    
T  12571866 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 12571965  T
Q  245 atttttcgtcct-accccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12571966 atttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 12572033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 153 - 312
Target Start/End: Original strand, 11656458 - 11656626
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || |||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  11656458 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgttgc 11656557  T
Q  245 atttttcgtcctaccccccattttattctcc-aaaaacgtagagaaatgacagttttagacctacccct 312  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  11656558 atttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctacccct 11656626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 154 - 311
Target Start/End: Original strand, 13224645 - 13224809
Alignment:
Q  154 taattacacttttggtcctcgtgttttggtcttctcactc-------ctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcat 246  Q
    ||||||||||||||||| ||||||||||| || |||||         |||||||||||||||||||||||||  |||||||||||| |||||||||| ||    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtctgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaat 13224744  T
Q  247 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13224745 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 13224809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 9930199 - 9930033
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||| |||||| || |||||        |||||||||||||||| ||||||||| |||||||||| ||| |||||||||||    
T  9930199 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttgttgc 9930100  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  9930099 atttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctacccc 9930033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 44831787 - 44831621
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||| ||||||||||||||||||||||||  | |||||        |||||| |||||||||||||||||||||||  ||||||||| |||||||||||    
T  44831787 ttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgttgc 44831688  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  44831687 atttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacccc 44831621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 194 - 308
Target Start/End: Complemental strand, 33743412 - 33743298
Alignment:
Q  194 ctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatga 293  Q
    ||||| ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  33743412 ctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataa 33743313  T
Q  294 cagttttagacctac 308  Q
    |||||||||||||||    
T  33743312 cagttttagacctac 33743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 9178177 - 9178005
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || |||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  9178177 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 9178078  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc-cctatgct 317  Q
    ||||||| || || |||||||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||||    
T  9178077 atttttcatctta-cccccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 147 - 302
Target Start/End: Complemental strand, 12572399 - 12572235
Alignment:
Q  147 tatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttt 238  Q
    ||||||||||||||||||||||||||||||||||||||| |||||        || ||| |||||||||||||||||||||||||||||||||| |||||    
T  12572399 tatggtttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttt 12572300  T
Q  239 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  12572299 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||| ||| |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| ||  |||| |  ||||| ||||| ||||||||| |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 13225181 - 13225023
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13225181 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 13225082  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  13225081 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 19176293 - 19176451
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19176293 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19176392  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  19176393 atttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 44831250 - 44831408
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||| |||||||| || |||||        ||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  44831250 ttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgc 44831349  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  44831350 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 311
Target Start/End: Complemental strand, 4630330 - 4630168
Alignment:
Q  151 gtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgtt 242  Q
    ||||||||||||||||| || ||||||||||| || |||||        ||||||  ||||||||||||| | |||||||||||||||||      ||||    
T  4630330 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat------tgtt 4630237  T
Q  243 gcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  4630236 gcatttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctacccc 4630168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 301
Target Start/End: Complemental strand, 31133762 - 31133605
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31133762 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 31133663  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 301  Q
    |||||||||| |||| || ||||| |  ||||| ||| | ||||||||||| ||||||    
T  31133662 atttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 144 - 259
Target Start/End: Complemental strand, 41681685 - 41681562
Alignment:
Q  144 aaatatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataat 235  Q
    |||||||| |||||||||||||||||||||||||||||| ||  ||||        |||| |||||||||||||||||||||||||||||||||||| ||    
T  41681685 aaatatggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcat 41681586  T
Q  236 ttttgttgcatttttcgtcctacc 259  Q
    ||||||||||||||||||||||||    
T  41681585 ttttgttgcatttttcgtcctacc 41681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 11656999 - 11656841
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||| | |||||||||||||||||||| |||||||||||||| |||||||||||    
T  11656999 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 11656900  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  11656899 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 34541090 - 34540967
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||| ||||||||||| ||||||| |||||||||||||| |||||||||||    
T  34541090 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgc 34540991  T
Q  245 atttttcgtcctaccccccatttt 268  Q
    ||||||||||||||| || |||||    
T  34540990 atttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 33328682 - 33328524
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||| |||||||||||||||||||| | || |||||        || ||| ||||||||||| |||||||||||||||||||||| |||||||||||    
T  33328682 ttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33328583  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||| ||| |||||||| |  ||||| ||||| ||||||||| |||||||||    
T  33328582 atttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 33742925 - 33743082
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||  || |||||        || |||||||||||||||||||||| ||||| ||||||||| ||||||| |||    
T  33742925 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaacaaa-cggtctttcaattatcatttttgatgc 33743023  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| || | ||| ||||| |||||||||||||||||||    
T  33743024 atttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 296
Target Start/End: Original strand, 4629847 - 4629952
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaa 290  Q
    |||||||||||||||| |||||||||||||| ||||||||| |||||| |||||||||||||| |||| || ||||| |  ||||| ||||| | |||||    
T  4629847 tcctgcccttttaaaatagaacaaaacggtcattcaattatcatttttattgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaa 4629946  T
Q  291 tgacag 296  Q
    ||||||    
T  4629947 tgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 43958264 - 43958325
Alignment:
Q  221 tccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacg 43958325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 280
Target Start/End: Original strand, 10918186 - 10918264
Alignment:
Q  202 ttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaa 280  Q
    |||||||||| |||||  ||||||||| ||| |||||||||||||||||| || ||||||||||||||| |||||||||    
T  10918186 ttaaaacagagcaaaattgtccttcaaatatcatttttgttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 11337064 - 11336959
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||| |||||||||||  | |||||        ||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  11337064 ttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttgttgc 11336965  T
Q  245 attttt 250  Q
    ||||||    
T  11336964 attttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 8074040 - 8073957
Alignment:
Q  198 ccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||||||||||||||   |||||||||||| | |||||||||||||| ||||  | |||||||||||  |||||||||||    
T  8074040 ccttttaaaacagaacaaaatcatccttcaattatca-ttttgttgcattttacgtcaaaacccccattttaccctccaaaaacg 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 9177724 - 9177793
Alignment:
Q  234 atttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||| ||| ||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 182
Target Start/End: Original strand, 9177670 - 9177699
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttgg 182  Q
    ||||||||||||||||||||||||||||||    
T  9177670 ttaattacacttttggtcctcgtgttttgg 9177699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 1e-59; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 150 - 311
Target Start/End: Original strand, 5136980 - 5137149
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||| |  |||||        || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  5136980 ggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 5137079  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5137080 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5137149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 148 - 311
Target Start/End: Original strand, 41046698 - 41046869
Alignment:
Q  148 atggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattttt 239  Q
    ||||||||||||||||||||||||||||||||||| ||  | ||        || |||||||||||||||||||||||||||||||||||||| ||||||    
T  41046698 atggtttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41046797  T
Q  240 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41046798 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 41046869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 37726932 - 37727098
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||||| || ||        | |||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  37726932 ttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 37727031  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37727032 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 37727098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 39556119 - 39555953
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  39556119 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttgc 39556020  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39556019 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 39555953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 31779194 - 31779028
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31779194 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 31779095  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  31779094 atttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtacccc 31779028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 20840563 - 20840729
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||| |||||||| |||||||||||||||||||||||| |||||||||||    
T  20840563 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 20840662  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  20840663 atttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctacccc 20840729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 24301098 - 24300932
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||| |||||||||| |||||||||||||||| | ||| |||||||||||    
T  24301098 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgttgc 24300999  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24300998 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 24300932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 315
Target Start/End: Original strand, 43973444 - 43973614
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||  || |||||        |  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43973444 ttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43973543  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccctatg 315  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  43973544 atttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccctatg 43973614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 23644465 - 23644631
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||| |||||| || |||||        ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  23644465 ttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttgttgc 23644564  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  23644565 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacccc 23644631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 138 - 311
Target Start/End: Complemental strand, 27394134 - 27393953
Alignment:
Q  138 atgttaaaatatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaat 229  Q
    ||||||| ||| || |||||||||||||||||||||||||||||| || |||||        ||||||| |||||||||||||||||||| |||||||||    
T  27394134 atgttaacataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaat 27394035  T
Q  230 tataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||| |||||||||||||||| | |||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  27394034 tatcatttttgttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctacccc 27393953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 25853769 - 25853603
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||| ||||||||||||| ||| |||||        || || | |||||||||||||||||| |||||||||||||| |||||||||||    
T  25853769 ttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 25853670  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  25853669 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctacccc 25853603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 48452995 - 48453144
Alignment:
Q  156 attacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatt 247  Q
    ||||||||||||||| ||||||||||| || |||||        ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48452995 attacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 48453094  T
Q  248 tttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagt 297  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48453095 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 153 - 315
Target Start/End: Complemental strand, 32535505 - 32535330
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattat-----aattttt 239  Q
    |||||||||||||||||||||||||||||| || |||||        |||||||||||||||||||||||||||||||||||||||||     |||||||    
T  32535505 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaattttt 32535406  T
Q  240 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacct-acccctatg 315  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  32535405 gttgcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 30104485 - 30104650
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||  || |||||        |||||||||||||||||| || | ||||||||||||||||| |||||||||||    
T  30104485 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgttgc 30104584  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||| ||||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  30104585 atttttcgtccta-cccccattttattatctaaaaacgcagagaaatgacagttttagacctacccc 30104650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 154 - 311
Target Start/End: Complemental strand, 22425354 - 22425189
Alignment:
Q  154 taattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgca 245  Q
    |||||||||||||||||||||||||| || || |||||        || ||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  246 tttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||| |||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctacccc 22425189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 192 - 311
Target Start/End: Complemental strand, 26275061 - 26274943
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaat 291  Q
    |||| |||||||||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||    
T  26275061 tcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaat 26274963  T
Q  292 gacagttttagacctacccc 311  Q
    ||||||||||||||||||||    
T  26274962 gacagttttagacctacccc 26274943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 197 - 317
Target Start/End: Complemental strand, 17464982 - 17464860
Alignment:
Q  197 cccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttc-gtcctaccccccattttattctccaaaaacgtagagaaatgaca 295  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||    
T  17464982 cccttttaaaatagaacaaaacggtccttcaattatcatttttgttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgaca 17464883  T
Q  296 gttttagacct-acccctatgct 317  Q
    ||||||||||| |||||||||||    
T  17464882 gttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 26837897 - 26837732
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || || ||        | ||||||||| |||| |||||||||||||| ||||| ||| |||||||||||    
T  26837897 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgttgc 26837799  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||    
T  26837798 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttacccc 26837732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 27393664 - 27393822
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||  || |||||        ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  27393664 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 27393763  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||| ||||| |  | ||| ||||| |||||||||||||||||||    
T  27393764 atttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 31778656 - 31778814
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||||| ||||         |||||||||||||||||||||||||||||||||||  |||| |||||||||||    
T  31778656 ttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttgttgc 31778755  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  31778756 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 37727472 - 37727314
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||| |||||||| || |||||        |||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  37727472 ttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 37727373  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  37727372 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 43973982 - 43973824
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        | ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  43973982 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 43973883  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| || | ||| ||||| |||||||||||||||||||    
T  43973882 atttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 150 - 282
Target Start/End: Complemental strand, 25612522 - 25612382
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||||||||||||||||||  || |||||        |||||||||||||||| |||||||||| ||| || |||||| ||||||||    
T  25612522 ggtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgt 25612423  T
Q  242 tgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  25612422 tgcatttttcgtcctaccccccattttatcctccaaaaacg 25612382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 17464494 - 17464652
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| ||  || |        || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17464494 ttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17464593  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||||| |||||||||||||||||    
T  17464594 atttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 20841103 - 20840945
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||| |||||||||||| || |||||        ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  20841103 ttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 20841004  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  20841003 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 39555581 - 39555739
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  39555581 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 39555680  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||| ||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  39555681 atttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 148 - 302
Target Start/End: Original strand, 25853232 - 25853395
Alignment:
Q  148 atggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattttt 239  Q
    |||| |||||||||||||||||||||||||||||| || |||||        || ||||||||||||| |||||||||||||||||||||||| ||||||    
T  25853232 atggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcattttt 25853331  T
Q  240 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||| ||||| || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  25853332 gttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 4275906 - 4275748
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || ||| ||||||||||||||||||||||||||| |||||| |||||||||||    
T  4275906 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4275807  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  4275806 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 268
Target Start/End: Original strand, 32534959 - 32535085
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    |||||||||||||||||||||||||||||||||  | |||||        ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  32534959 ggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 32535058  T
Q  242 tgcatttttcgtcctaccccccatttt 268  Q
    |||||||||||||||||| || |||||    
T  32535059 tgcatttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 304
Target Start/End: Complemental strand, 29801958 - 29801798
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||| ||||||| |||||| || |||||        ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  29801958 ttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29801859  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 304  Q
    ||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| ||||||||    
T  29801858 atttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 198 - 302
Target Start/End: Original strand, 22424870 - 22424975
Alignment:
Q  198 ccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacag 296  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||    
T  22424870 ccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacag 22424969  T
Q  297 ttttag 302  Q
    ||||||    
T  22424970 ttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 302
Target Start/End: Original strand, 26837360 - 26837521
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    |||||||||||| |||||||||| || |||||| || |||||        ||||||||||||| |||| ||| |||||||||||||||||| ||||||||    
T  26837360 ggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgt 26837459  T
Q  242 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  26837460 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 263
Target Start/End: Original strand, 29801352 - 29801477
Alignment:
Q  146 atatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattt 237  Q
    |||||| |||||||||||||||||| |||||||||||  | |||||        ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  29801352 atatggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattt 29801451  T
Q  238 ttgttgcatttttcgtcctacccccc 263  Q
    ||||||||||||||||| ||||||||    
T  29801452 ttgttgcatttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 26274617 - 26274728
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaa 290  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||| |  ||||| ||||| ||  |||    
T  26274617 tcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcatacctcctattttcaaactccagaaacgcagttaaa 26274716  T
Q  291 tgacagttttag 302  Q
    ||||||||||||    
T  26274717 tgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 143 - 302
Target Start/End: Complemental strand, 30098315 - 30098147
Alignment:
Q  143 aaaatatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataa 234  Q
    |||||| || |||||||||||||||||||||||||||||   | |||||        || ||||||||||||||||||||||| |||||||||||||| |    
T  30098315 aaaataaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatca 30098216  T
Q  235 tttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||||||||||||| || ||||| |  || || ||||| ||||| |||||||||||||    
T  30098215 tttttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 5137523 - 5137365
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || ||||         | |||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  5137523 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 5137424  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||| |||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5137423 atttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 23645007 - 23644849
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||| |||||||||||||||||||||| || |||||        |||| |||||||||||||||||||||||||| ||||||||| |||||||||||    
T  23645007 ttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 23644908  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||| ||||||| || ||||| |  ||| |  |||| |||||||||||||||||||    
T  23644907 atttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 23228549 - 23228414
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||| |||||||||| || |||||        || |||||||||||||| ||||||||  ||||||||||||| |||||| ||||    
T  23228549 ttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttattgc 23228451  T
Q  245 atttttcgtcctaccccccattttattctccaaaaac 281  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  23228450 atttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 32697191 - 32697105
Alignment:
Q  196 gcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgt 283  Q
    ||||||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  32697191 gcccttttaaaacagaacaaaattgtgcttcaattatcatttttgttgcatttttcgtcctac-ccccattttatcctccaaaaacgt 32697105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 37220560 - 37220697
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||| |||||| || |||||        || ||| |||||||||||||| ||||  |||||||| |||| |||||||||||    
T  37220560 ttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttgttgc 37220659  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacg 282  Q
    | |||||||||||||| ||||||||| |||||||||||    
T  37220660 acttttcgtcctaccctccattttatcctccaaaaacg 37220697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 24300606 - 24300717
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaa 290  Q
    ||||| ||||||||||||||| |||||||| |||||||||| |||||||||||| ||||||||| ||| || ||||| |  ||||| ||||| |||||||    
T  24300606 tcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaa 24300705  T
Q  291 tgacagttttag 302  Q
    ||||||||||||    
T  24300706 tgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 50116901 - 50116814
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||| ||| |||||||||||||| |||| |||| |||||||||||| |||||||||||||||||||||| | |||||||||||    
T  50116901 tgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttgcaattttcgtcctaccccccattttttcctccaaaaacg 50116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 198 - 302
Target Start/End: Complemental strand, 41047187 - 41047083
Alignment:
Q  198 ccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacag 296  Q
    ||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||    
T  41047187 ccttttaaaacagaataaaacg-tccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcag 41047089  T
Q  297 ttttag 302  Q
    ||||||    
T  41047088 ttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 25420632 - 25420548
Alignment:
Q  196 gcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaa 280  Q
    |||||||||||| |||| ||||  ||||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||    
T  25420632 gcccttttaaaatagaataaaattgtccttcaattattatttttgttgcatttttcgtcataccccccattttatccttcaaaaa 25420548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 280
Target Start/End: Original strand, 45965941 - 45966076
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||  | |||||        |||||| ||||||||||| |||||||  ||||||| ||||| |||| ||||||    
T  45965941 ttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtgttgc 45966040  T
Q  245 atttttcgtcctaccccccattttattctccaaaaa 280  Q
    ||||||||| ||| |||||||||| | |||||||||    
T  45966041 atttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 51474826 - 51474738
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctacccccca-ttttattctccaaaaacg 282  Q
    ||||||||||||||| |||||||  |||||| | |||| ||||||||||||||||||||||||||||| | |||||| |||||||||||    
T  51474826 tgcccttttaaaacataacaaaattgtcctttagttatcatttttgttgcatttttcgtcctacccccaatttttatcctccaaaaacg 51474738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 18010236 - 18010162
Alignment:
Q  196 gcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttat 270  Q
    ||||||||||||||||||||||  ||  ||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  18010236 gcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccctccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 51473431 - 51473542
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||||||  ||||        ||||||||||||||||||||||||||  |||||||  |||| |||||||||||    
T  51473431 ttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgttgc 51473530  T
Q  245 atttttcgtcct 256  Q
    | |||| |||||    
T  51473531 acttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 23227319 - 23227396
Alignment:
Q  205 aaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||||||   ||||| ||||| | ||||||||||||||||||||||| | ||||||||||| |||||||||||    
T  23227319 aaacagaacaaatttgtcctccaattttcatttttgttgcatttttcgtccttctccccattttatcctccaaaaacg 23227396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 282
Target Start/End: Original strand, 25419196 - 25419284
Alignment:
Q  194 ctgcccttttaaaacagaacaaaacggtcc-ttcaattat-aatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||||||||||||||||||| |||| ||||||||| | ||||| ||||| |||| |||||  |||||||||||  |||||||||||    
T  25419196 ctgcccttttaaaacagaacaaaactgtcctttcaattatcatttttttttgcagttttagtccttacccccatttta--ctccaaaaacg 25419284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 29801532 - 29801583
Alignment:
Q  258 ccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 309  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||| ||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacc 29801583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 280
Target Start/End: Complemental strand, 37222113 - 37221976
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttc--aattataatttttgtt 242  Q
    |||||||||||||||||||||||||||||  || |||||        ||||||| |||||||||||||||||||  ||||||  || ||||   ||  ||    
T  37222113 ttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaaaaatataggcttaatt 37222014  T
Q  243 gcatttttcgtcctaccccccattttattctccaaaaa 280  Q
    ||| |||||||| ||||||||||||||  |||||||||    
T  37222013 gcacttttcgtcataccccccattttaccctccaaaaa 37221976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 55192222 - 55192286
Alignment:
Q  247 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||| |||||||| || |||||   ||||| ||||| ||||||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctacccc 55192286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 311
Target Start/End: Original strand, 49407925 - 49407964
Alignment:
Q  272 ctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  49407925 ctccaaaaacgcagagaaatgacaattttagacctacccc 49407964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 32695761 - 32695830
Alignment:
Q  200 ttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttta 269  Q
    ||||||||||||||||||  ||||| | ||||| |||||||||||| |||| |||||  ||| |||||||    
T  32695761 ttttaaaacagaacaaaattgtcctacgattattatttttgttgcaattttagtccttaccctcatttta 32695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 27200108 - 27200068
Alignment:
Q  272 ctccaaaaacgtagagaaatgacagttttagacctacccct 312  Q
    ||||| ||||| ||||||||||||| |||||||||||||||    
T  27200108 ctccagaaacgcagagaaatgacaggtttagacctacccct 27200068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 37075781 - 37075857
Alignment:
Q  235 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||| ||||| |||| |||||||| |  |||||   ||||| ||||| ||||||||||| ||||||||||||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctacccc 37075857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 4796 - 4962
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4796 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4895  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  4896 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctacccc 4962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 153 - 256
Target Start/End: Complemental strand, 5333 - 5222
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| ||  ||||        || || ||||||||||||||| ||||||||  ||||||||| |||||||||||    
T  5333 ttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttgc 5234  T
Q  245 atttttcgtcct 256  Q
    ||||||||||||    
T  5233 atttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 8e-58; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 10900472 - 10900306
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||| |||||| || |||||        || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10900472 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900373  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10900372 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 10900306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 11277124 - 11276958
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||  | |||||        |||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  11277124 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 11277025  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11277024 atttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctacccc 11276958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 20741103 - 20741269
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||||||||||||||||||||||| |||||||||| ||| |||||||||||    
T  20741103 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgttgc 20741202  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20741203 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 20741269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 153 - 310
Target Start/End: Original strand, 18257140 - 18257305
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||  | |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18257140 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18257239  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 310  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18257240 atttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 18257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 15828183 - 15828017
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || | ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  15828183 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 15828084  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  15828083 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctacccc 15828017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 31470809 - 31470691
Alignment:
Q  194 ctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatga 293  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31470809 ctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatga 31470710  T
Q  294 cagttttagacctacccct 312  Q
    || ||||||| ||||||||    
T  31470709 caattttagatctacccct 31470691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 18505461 - 18505288
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||| ||||||||||||||||||||||||| |||||        |||||||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  18505461 ttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttgc 18505362  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacct-acccctatgct 317  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | || |||||||||||    
T  18505361 atttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 152 - 317
Target Start/End: Original strand, 10899941 - 10900115
Alignment:
Q  152 tttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttg 243  Q
    ||||||||||||||||||| ||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10899941 tttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 10900040  T
Q  244 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccctatgct 317  Q
    |||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  10900041 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccctatgct 10900115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 11444990 - 11445156
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||||| |||||||||||| |||| |||||||||||||| |||||||||||    
T  11444990 ttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgttgc 11445089  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  11445090 atttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctacccc 11445156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 12935699 - 12935533
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||  | |||||        ||||||| || |||||||||||||||||||||||||||||| ||||||||| |    
T  12935699 ttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgttac 12935600  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  12935599 atttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctacccc 12935533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 28472640 - 28472805
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| |  |||||        ||||||| |||||||||||||||||| |||| ||||||||| |||||||||||    
T  28472640 ttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgc 28472739  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28472740 atttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 28472805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 29859829 - 29859994
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| |  |||||        ||||||| |||||||||||||||||| |||| ||||||||| |||||||||||    
T  29859829 ttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgc 29859928  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29859929 atttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29859994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 2319675 - 2319832
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||| |||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2319675 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2319774  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  2319775 atttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 144 - 311
Target Start/End: Complemental strand, 1149983 - 1149807
Alignment:
Q  144 aaatatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataat 235  Q
    |||| ||| |||||||||||||||||||||||||||| | || ||||         || ||||||||||||| |||||||||||||||||||||||  ||    
T  1149983 aaatttggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccat 1149884  T
Q  236 ttttgttgcatttttcgtcctaccccccattttattctcca-aaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  1149883 ttttgttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctacccc 1149807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 151 - 311
Target Start/End: Complemental strand, 2322762 - 2322595
Alignment:
Q  151 gtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgtt 242  Q
    |||||||||||||||||||| |||||||||||||| |||||        || |||| ||||||||||||||||||||||||||||||||| |||||||||    
T  2322762 gtttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgtt 2322663  T
Q  243 gcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  2322662 gcatttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttcccc 2322595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 12935160 - 12935318
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12935160 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12935259  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  12935260 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 11445529 - 11445371
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  11445529 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11445430  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  11445429 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 22219895 - 22219737
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22219895 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22219796  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||| ||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  22219795 atttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 309
Target Start/End: Original strand, 23074002 - 23074155
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        |||||||||||||||| ||||||||||||||||||||||||           |    
T  23074002 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-----------c 23074090  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 309  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  23074091 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctacc 23074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 23075670 - 23075512
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23075670 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 23075571  T
Q  245 atttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||| ||||| || | |||||  ||||||||| | |||||||||||||||||||    
T  23075570 atttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 153 - 305
Target Start/End: Original strand, 4811375 - 4811535
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||  || ||||||||| |||||        || ||||||||||||| |||| ||||||||||||||||||| ||||||||| |    
T  4811375 ttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgtttc 4811474  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacc 305  Q
    |||||||||| |||||||||||||||||| |||||||| ||| |||| |||||||||||||    
T  4811475 atttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 11276640 - 11276766
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaa 290  Q
    |||| ||||||||||||||||||||| |||||||||||| | ||||||||| |||||||||||||||| || ||||| |  ||||||||||| |||||||    
T  11276640 tcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttgtttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaa 11276739  T
Q  291 tgacagttttagacctacccctatgct 317  Q
    |||||||||||| ||||||||||||||    
T  11276740 tgacagttttaggcctacccctatgct 11276766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 302
Target Start/End: Original strand, 18504920 - 18505080
Alignment:
Q  151 gtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgtt 242  Q
    |||||||||||||||||||||||||||||||| || |||||        ||||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  18504920 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtt 18505019  T
Q  243 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
     |||||||||||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  18505020 tcatttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 18257679 - 18257521
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||| |||||||||||||||||||||  || |||||        ||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  18257679 ttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttac 18257580  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| |  |||||    ||||| | |||||||||||||||||||||||    
T  18257579 atttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttag 18257521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 18296198 - 18296284
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| |||||||||||| |||||||||||    
T  18296198 tgcccttttaaaacagaacaaaaccgtccttcatttatcatttttgttgcatttttcgtccta-cccccattttatcctccaaaaacg 18296284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 20741646 - 20741485
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataa---tttttgt 241  Q
    ||||||||||| |||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| |   ||||| |    
T  20741646 ttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttttttt 20741547  T
Q  242 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  20741546 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 29033437 - 29033575
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||| |||||| || |||||        ||||||||||||||||||||||||||| |||||||| |||| |||||||||||    
T  29033437 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttgc 29033536  T
Q  245 atttttcgtcctaccccccattttatt-ctccaaaaacg 282  Q
    |  |||| |||||||||||||||| || |||||||||||    
T  29033537 acatttcatcctaccccccatttttttcctccaaaaacg 29033575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 31470318 - 31470476
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||| |||||||||||||| || |||||        || ||| |||||||||||||||||||| ||| ||||||||| |||||||||||    
T  31470318 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttgttgc 31470417  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  31470418 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 145 - 278
Target Start/End: Complemental strand, 3835276 - 3835135
Alignment:
Q  145 aatatggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatt 236  Q
    |||| ||||||||||||||||||||||  ||||||||  || |||||        |||||||  |||||||||||||||||  |||||| |||||| |||    
T  3835276 aataaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatt 3835177  T
Q  237 tttgttgcatttttcgtcctaccccccattttattctccaaa 278  Q
    ||||| |||||||||||||||||||||||||||| |||||||    
T  3835176 tttgtggcatttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 29035129 - 29035042
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||||||||||||||||||||||  |||||| | |||| |||||||||||||||||||||| |||| ||||||| | |||||||||||    
T  29035129 tgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttgcatttttcgtcccaccctccattttttcctccaaaaacg 29035042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 4811743 - 4811675
Alignment:
Q  200 ttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt 268  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||| || |||||    
T  4811743 ttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 15827641 - 15827766
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaa--acggtccttcaattataatttttgtt 242  Q
    ||||||||||||||||||||||||||||||  | |||||        | ||| |||||||||||| ||||||  |||||||||||| ||| |||||||||    
T  15827641 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttgtt 15827740  T
Q  243 gcatttttcgtcctaccccccatttt 268  Q
    ||||||||||||||||| || |||||    
T  15827741 gcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 1149468 - 1149553
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaatt 230  Q
    ||||||||||||||| |||||||||||||| || |||||        |||||||||||||||||||||||||| ||||||||||||    
T  1149468 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 311
Target Start/End: Complemental strand, 35163639 - 35163563
Alignment:
Q  235 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||| ||||| |||| |||||||| || |||||   ||||||||||  ||||||||||||||||||| ||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctacccc 35163563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 1670 - 1836
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||| |||||||| || |||||        |||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  1670 ttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgttgc 1769  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1770 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 1836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 2209 - 2051
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || || ||        ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  2209 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 2110  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 302  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  2109 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 4749 - 4583
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||| |||||||||||  | |||||        |||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  4749 ttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4650  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  4649 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacccc 4583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 4253 - 4364
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaa 290  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||| |  ||| ||||| | |||||||    
T  4253 tcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaaatgcagagaaa 4352  T
Q  291 tgacagttttag 302  Q
    ||||||||||||    
T  4353 tgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 134215 - 134049
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||| || |||||        || ||||||||||| ||||||||||||| |||||||||||  |||||||||||    
T  134215 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttgttgc 134116  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  134115 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 134049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 106; Significance: 5e-53; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 64305 - 64471
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||||||||||||||   | |||||        ||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  64305 ttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 64404  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  64405 atttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 64471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 64850 - 64735
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    |||||||||||||||||||||||||||||||||  | |||||        ||| |||||||||||||||||||||||||||||| |||||| ||||||||    
T  64850 ggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgt 64751  T
Q  242 tgcatttttcgtccta 257  Q
    ||||||||||||||||    
T  64750 tgcatttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 311
Target Start/End: Complemental strand, 205784 - 205745
Alignment:
Q  272 ctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  205784 ctccaaaaacgcagagaaatggcagttttagacctacccc 205745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 153 - 312
Target Start/End: Original strand, 756 - 922
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||||||| ||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  756 ttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt-gttgc 854  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccct 312  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||    
T  855 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacatacccct 922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 1283 - 1110
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    |||||||||||||| |||||||||||||||  | |||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1283 ttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1184  T
Q  245 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccctatgct 317  Q
    || |||||||||||| || ||||| |  | ||| ||||| ||| ||||| |||||||||||| |||||||||||    
T  1183 atctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacccctatgct 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 42700 - 42535
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||| |||||||| |||||||||||||||| ||||         | |||||||||||||||||||||||||||||||||| |||| ||||||||| |    
T  42700 ttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgtttc 42601  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42600 atttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 42535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 150 - 317
Target Start/End: Original strand, 42169 - 42345
Alignment:
Q  150 ggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgt 241  Q
    ||||||||||||||||| || |||||||||||||||  ||||        ||||||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  42169 ggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgt 42268  T
Q  242 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccctatgct 317  Q
    ||||||||| ||| |||| || ||||| |  || || ||||| ||||||||||||||||||||||||||||||||||    
T  42269 tgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccctatgct 42345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 10414 - 10249
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||||||||||||||||||||| |||||        |  | |||||||||||||||||||||||||||||||||||| |||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 311  Q
    |||||||||||||| |||||||||||||||||||||   |||||||||||||||||| |||||||||    
T  10314 atttttcgtcctac-ccccattttattctccaaaaattcagagaaatgacagttttaaacctacccc 10249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 9985 - 10039
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttt 249  Q
    ||||||||||| | ||||||||| |||||||||||||| | ||||||| ||||||    
T  9985 tgcccttttaagatagaacaaaatggtccttcaattatcaattttgttacatttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 192 - 311
Target Start/End: Original strand, 10671 - 10790
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaat 291  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  10671 tcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctccattttattctccaaaaatgcagagaaat 10770  T
Q  292 gacagttttagacctacccc 311  Q
    ||||||||||||| ||||||    
T  10771 gacagttttagacgtacccc 10790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 148 - 268
Target Start/End: Complemental strand, 11170 - 11042
Alignment:
Q  148 atggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattttt 239  Q
    |||| |||||||||||||||||||||||||||||| || || ||        |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  11170 atggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 11071  T
Q  240 gttgcatttttcgtcctaccccccatttt 268  Q
    |||||||||||||||||||| || |||||    
T  11070 gttgcatttttcgtcctacctcctatttt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 210 - 311
Target Start/End: Original strand, 16564 - 16665
Alignment:
Q  210 gaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 309  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  310 cc 311  Q
    ||    
T  16664 cc 16665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 16983 - 16880
Alignment:
Q  200 ttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtt 298  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||| ||||||    
T  16983 ttttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaattacagtt 16884  T
Q  299 ttag 302  Q
    ||||    
T  16883 ttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 195 - 315
Target Start/End: Original strand, 18888 - 19007
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgac 294  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||| ||    
T  18888 tgcccttttaaaacataacaaaacggtgcttcaattatcatttttgttgcatttttcatccta-cccccattttattctccaaaaacgcagagaaataac 18986  T
Q  295 agttttagacctacccctatg 315  Q
    |||||||||| |||| |||||    
T  18987 agttttagacttacctctatg 19007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 19163 - 19069
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattttt 239  Q
    |||||||||||||||||||||||||||||| || |||||        ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19163 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 7783 - 7693
Alignment:
Q  192 tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    |||| |||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  7783 tccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacg 7693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 570 - 707
Alignment:
Q  153 ttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgc 244  Q
    ||||||||||||||| |||||||||||||| || |||||        || |||||||||||||||||||||||| ||||||||||||| ||||||||||     
T  570 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgttgt 669  T
Q  245 atttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||||  ||| ||||||| || |||||||||||    
T  670 atttttcgtctcacctcccatttgatcctccaaaaacg 707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 28735 - 28662
Alignment:
Q  195 tgcccttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccatttt 268  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||    
T  28735 tgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcagttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 282
Target Start/End: Complemental strand, 62002 - 61863
Alignment:
Q  151 gtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataatttttgtt 242  Q
    ||||||||||||||||| ||||||||||||||||| |||||        |||| ||||||||||| |||||||||   || ||||| ||| |||||||||    
T  62002 gtttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgtt 61903  T
Q  243 gcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
      |||||||||||||||||||||||| | |||||||||||    
T  61902 atatttttcgtcctaccccccattttgtcctccaaaaacg 61863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 8556 - 8451
Alignment:
Q  148 atggtttaattacacttttggtcctcgtgttttggtcttctcac--------tcctgcccttttaaaacagaacaaaacggtccttcaattataattttt 239  Q
    ||||||||||||||||||||||| || ||||||||||| || ||        |||| ||||||||||||| | |||||||||||||||||||| ||||||    
T  8556 atggtttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcattttt 8457  T
Q  240 gttgca 245  Q
    ||||||    
T  8456 gttgca 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 506 - 588
Alignment:
Q  199 cttttaaaacagaacaaaacggtccttcaattataatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 282  Q
    ||||||||||| |||| ||  ||||||||||||| |||||||||||||||||||||||| | |||||||||| ||| |||||||    
T  506 cttttaaaacaaaacataatcgtccttcaattatcatttttgttgcatttttcgtccta-cacccattttatcctcaaaaaacg 588  T

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