View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18686_high_6 (Length: 483)

Name: NF18686_high_6
Description: NF18686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18686_high_6
NF18686_high_6
[»] chr2 (40 HSPs)
chr2 (50-464)||(9774152-9774566)
chr2 (223-338)||(25618548-25618665)
chr2 (228-338)||(29719226-29719339)
chr2 (232-313)||(17743475-17743558)
chr2 (31-132)||(29719104-29719206)
chr2 (36-119)||(30411805-30411889)
chr2 (36-133)||(27908996-27909093)
chr2 (36-128)||(25618685-25618777)
chr2 (31-119)||(29143088-29143176)
chr2 (31-132)||(15339363-15339465)
chr2 (237-338)||(15339229-15339333)
chr2 (233-313)||(17349374-17349455)
chr2 (228-313)||(20174630-20174717)
chr2 (232-313)||(45621880-45621963)
chr2 (228-313)||(25888219-25888302)
chr2 (36-119)||(28925660-28925743)
chr2 (37-119)||(17675507-17675589)
chr2 (60-133)||(25887805-25887878)
chr2 (231-313)||(25196027-25196111)
chr2 (223-313)||(32085480-32085572)
chr2 (232-292)||(12953293-12953353)
chr2 (232-292)||(25920306-25920366)
chr2 (232-313)||(27909118-27909201)
chr2 (232-313)||(31804899-31804982)
chr2 (36-119)||(26603237-26603320)
chr2 (16-53)||(9762311-9762348)
chr2 (30-132)||(17743348-17743451)
chr2 (47-128)||(32085594-32085673)
chr2 (39-115)||(25196153-25196229)
chr2 (232-313)||(30411695-30411778)
chr2 (31-119)||(17349486-17349575)
chr2 (232-291)||(24090925-24090984)
chr2 (36-119)||(25530574-25530657)
chr2 (232-308)||(25535296-25535374)
chr2 (228-303)||(11382748-11382825)
chr2 (37-119)||(17635653-17635735)
chr2 (88-128)||(11382682-11382722)
chr2 (31-79)||(17198035-17198083)
chr2 (59-119)||(17890076-17890135)
chr2 (232-292)||(29143001-29143061)
[»] chr1 (47 HSPs)
chr1 (228-313)||(13345331-13345418)
chr1 (232-313)||(12208618-12208701)
chr1 (232-313)||(17610255-17610338)
chr1 (231-310)||(21666606-21666687)
chr1 (232-313)||(9401525-9401605)
chr1 (229-303)||(51473872-51473948)
chr1 (32-119)||(29242645-29242732)
chr1 (234-313)||(3591654-3591735)
chr1 (31-129)||(9401634-9401732)
chr1 (232-313)||(16787725-16787808)
chr1 (232-313)||(25405629-25405712)
chr1 (234-313)||(17837534-17837615)
chr1 (236-313)||(21847651-21847729)
chr1 (228-334)||(24281272-24281381)
chr1 (45-115)||(17610142-17610213)
chr1 (232-313)||(15543965-15544048)
chr1 (232-313)||(21449106-21449189)
chr1 (31-119)||(22623029-22623117)
chr1 (228-313)||(23038007-23038093)
chr1 (33-133)||(28008231-28008329)
chr1 (45-119)||(16179144-16179219)
chr1 (62-129)||(51473780-51473846)
chr1 (37-115)||(16069440-16069518)
chr1 (232-315)||(21987981-21988066)
chr1 (234-313)||(24306307-24306387)
chr1 (231-292)||(16916931-16916992)
chr1 (47-132)||(22664333-22664417)
chr1 (236-336)||(12012803-12012906)
chr1 (59-119)||(14779704-14779764)
chr1 (35-79)||(17121377-17121421)
chr1 (230-338)||(17359153-17359264)
chr1 (31-132)||(17359286-17359388)
chr1 (36-132)||(18100891-18100985)
chr1 (232-313)||(18736239-18736322)
chr1 (31-119)||(18825782-18825870)
chr1 (31-119)||(23179923-23180011)
chr1 (232-313)||(29242536-29242619)
chr1 (36-79)||(13345215-13345258)
chr1 (36-79)||(21334595-21334638)
chr1 (36-116)||(21449218-21449299)
chr1 (45-132)||(31235935-31236023)
chr1 (36-105)||(12208754-12208823)
chr1 (45-119)||(25405517-25405591)
chr1 (231-313)||(31236046-31236130)
chr1 (228-292)||(15813519-15813583)
chr1 (89-125)||(16787657-16787693)
chr1 (31-79)||(16916818-16916866)
[»] chr5 (35 HSPs)
chr5 (36-132)||(20744547-20744643)
chr5 (232-313)||(19004225-19004308)
chr5 (231-313)||(39434479-39434563)
chr5 (37-132)||(17432008-17432103)
chr5 (232-312)||(24245543-24245625)
chr5 (228-303)||(15690804-15690881)
chr5 (45-131)||(24260643-24260728)
chr5 (231-313)||(20315428-20315512)
chr5 (233-313)||(24266955-24267036)
chr5 (233-313)||(24343586-24343667)
chr5 (233-313)||(34487655-34487736)
chr5 (34-131)||(36175261-36175356)
chr5 (233-313)||(17171553-17171635)
chr5 (31-119)||(20563964-20564053)
chr5 (233-337)||(18208249-18208355)
chr5 (233-335)||(25550504-25550609)
chr5 (232-310)||(23388837-23388917)
chr5 (231-313)||(24140459-24140543)
chr5 (232-313)||(36175151-36175233)
chr5 (36-133)||(15690902-15690997)
chr5 (36-125)||(24140568-24140657)
chr5 (234-312)||(24852173-24852253)
chr5 (88-132)||(22755648-22755692)
chr5 (234-337)||(15469928-15470034)
chr5 (36-119)||(20315307-20315390)
chr5 (36-114)||(24245421-24245499)
chr5 (231-313)||(17431900-17431984)
chr5 (235-313)||(19086181-19086261)
chr5 (36-105)||(34128788-34128857)
chr5 (36-119)||(15375772-15375856)
chr5 (232-292)||(15375881-15375941)
chr5 (232-313)||(17315099-17315182)
chr5 (232-292)||(20549703-20549763)
chr5 (232-288)||(24260560-24260616)
chr5 (228-292)||(25402332-25402396)
[»] chr6 (47 HSPs)
chr6 (234-337)||(9726014-9726120)
chr6 (232-313)||(9516802-9516885)
chr6 (36-132)||(27737566-27737662)
chr6 (223-313)||(21672425-21672517)
chr6 (232-291)||(17827091-17827150)
chr6 (36-133)||(23844342-23844440)
chr6 (233-303)||(4339762-4339834)
chr6 (223-313)||(21679841-21679933)
chr6 (31-119)||(25781916-25782004)
chr6 (232-313)||(27737688-27737771)
chr6 (233-313)||(12183331-12183413)
chr6 (232-291)||(24252228-24252287)
chr6 (235-337)||(25927305-25927410)
chr6 (228-313)||(18075382-18075470)
chr6 (31-119)||(20144994-20145083)
chr6 (31-119)||(22187756-22187845)
chr6 (231-313)||(22410325-22410409)
chr6 (233-338)||(23143713-23143821)
chr6 (31-119)||(11136034-11136124)
chr6 (240-313)||(17729169-17729244)
chr6 (228-313)||(21907449-21907536)
chr6 (232-313)||(23645766-23645849)
chr6 (36-116)||(27124372-27124452)
chr6 (33-79)||(5624819-5624865)
chr6 (234-313)||(17299832-17299913)
chr6 (234-313)||(22566163-22566244)
chr6 (33-119)||(24475194-24475280)
chr6 (233-303)||(9838383-9838455)
chr6 (223-288)||(22567884-22567949)
chr6 (45-118)||(22813607-22813680)
chr6 (31-79)||(22566034-22566082)
chr6 (232-313)||(23231982-23232065)
chr6 (232-313)||(23844464-23844547)
chr6 (31-115)||(24657341-24657425)
chr6 (48-131)||(23645657-23645738)
chr6 (33-79)||(1635140-1635186)
chr6 (235-337)||(7542962-7543067)
chr6 (233-337)||(15466362-15466468)
chr6 (228-303)||(28933655-28933732)
chr6 (36-129)||(12183208-12183299)
chr6 (51-112)||(17382214-17382275)
chr6 (233-337)||(8241269-8241374)
chr6 (233-337)||(11176942-11177049)
chr6 (37-132)||(14079336-14079432)
chr6 (260-313)||(17382162-17382217)
chr6 (232-313)||(27124491-27124574)
chr6 (88-132)||(28933589-28933632)
[»] chr3 (43 HSPs)
chr3 (232-338)||(21301909-21302018)
chr3 (31-119)||(8770146-8770234)
chr3 (60-132)||(20429836-20429908)
chr3 (36-133)||(21303232-21303327)
chr3 (233-337)||(12805890-12805997)
chr3 (36-119)||(8765244-8765327)
chr3 (231-294)||(19925621-19925684)
chr3 (36-129)||(2167495-2167587)
chr3 (31-119)||(17438303-17438391)
chr3 (232-292)||(17438430-17438490)
chr3 (37-116)||(932884-932963)
chr3 (228-312)||(2167612-2167698)
chr3 (36-119)||(4650364-4650447)
chr3 (36-132)||(16245607-16245703)
chr3 (233-313)||(16245729-16245811)
chr3 (223-313)||(3116409-3116500)
chr3 (235-313)||(4650248-4650328)
chr3 (268-337)||(6289895-6289967)
chr3 (40-132)||(21325468-21325558)
chr3 (234-313)||(21825870-21825950)
chr3 (232-313)||(22349426-22349509)
chr3 (36-132)||(41508493-41508588)
chr3 (232-313)||(7478334-7478412)
chr3 (232-312)||(12411169-12411251)
chr3 (234-313)||(821515-821596)
chr3 (234-313)||(8557130-8557211)
chr3 (238-313)||(28728961-28729038)
chr3 (36-116)||(12754800-12754881)
chr3 (45-125)||(19925508-19925588)
chr3 (223-313)||(21325357-21325449)
chr3 (232-313)||(7495094-7495172)
chr3 (45-132)||(18736559-18736645)
chr3 (234-313)||(10917935-10918016)
chr3 (88-125)||(3116349-3116386)
chr3 (231-313)||(20429727-20429811)
chr3 (34-79)||(27413772-27413817)
chr3 (233-281)||(5508386-5508434)
chr3 (31-79)||(8170050-8170098)
chr3 (59-131)||(10745028-10745099)
chr3 (232-292)||(16229941-16230001)
chr3 (47-119)||(17155931-17156001)
chr3 (232-313)||(19171833-19171916)
chr3 (36-115)||(19908449-19908529)
[»] chr7 (64 HSPs)
chr7 (231-292)||(16365745-16365806)
chr7 (223-338)||(4785828-4785945)
chr7 (223-338)||(4818828-4818945)
chr7 (223-313)||(3734613-3734705)
chr7 (33-132)||(1848102-1848202)
chr7 (232-313)||(3329657-3329740)
chr7 (228-292)||(9731622-9731686)
chr7 (233-337)||(31492922-31493029)
chr7 (233-313)||(8979006-8979088)
chr7 (234-337)||(18662433-18662539)
chr7 (36-123)||(20582390-20582477)
chr7 (45-132)||(3329543-3329631)
chr7 (232-303)||(11803107-11803180)
chr7 (223-313)||(7318290-7318382)
chr7 (234-313)||(2563835-2563915)
chr7 (232-313)||(13759859-13759942)
chr7 (36-130)||(9131038-9131132)
chr7 (228-338)||(2350742-2350855)
chr7 (36-129)||(5108693-5108787)
chr7 (231-310)||(8877441-8877522)
chr7 (234-313)||(9864327-9864408)
chr7 (223-337)||(1584537-1584652)
chr7 (59-132)||(8313293-8313364)
chr7 (31-119)||(8877559-8877648)
chr7 (223-313)||(17153144-17153236)
chr7 (231-313)||(18368978-18369062)
chr7 (246-313)||(5108583-5108651)
chr7 (234-290)||(6005878-6005934)
chr7 (228-313)||(23099947-23100034)
chr7 (56-132)||(7492160-7492236)
chr7 (36-119)||(13418660-13418743)
chr7 (36-119)||(18662579-18662661)
chr7 (232-311)||(1848226-1848307)
chr7 (231-337)||(12329674-12329783)
chr7 (31-132)||(39273048-39273150)
chr7 (36-132)||(2563943-2564040)
chr7 (228-292)||(6042500-6042564)
chr7 (232-313)||(8054488-8054571)
chr7 (228-313)||(10587019-10587106)
chr7 (261-333)||(10937598-10937673)
chr7 (31-115)||(11803211-11803295)
chr7 (232-292)||(16059020-16059080)
chr7 (49-132)||(16297724-16297806)
chr7 (232-292)||(17203063-17203123)
chr7 (232-313)||(39273174-39273257)
chr7 (36-79)||(4786019-4786062)
chr7 (259-313)||(7397213-7397268)
chr7 (37-119)||(7397280-7397362)
chr7 (233-313)||(16297820-16297902)
chr7 (95-133)||(2350682-2350720)
chr7 (234-292)||(4579137-4579195)
chr7 (232-313)||(8054060-8054140)
chr7 (234-313)||(9500461-9500542)
chr7 (223-292)||(12181648-12181718)
chr7 (33-79)||(16365884-16365930)
chr7 (223-313)||(4986572-4986664)
chr7 (223-313)||(4990670-4990762)
chr7 (231-292)||(7492261-7492322)
chr7 (223-313)||(9574424-9574516)
chr7 (223-336)||(15869588-15869704)
chr7 (36-119)||(6042589-6042672)
chr7 (88-132)||(7318400-7318443)
chr7 (234-290)||(9245223-9245279)
chr7 (232-292)||(11221163-11221223)
[»] chr4 (35 HSPs)
chr4 (232-313)||(13908871-13908954)
chr4 (223-337)||(17671994-17672111)
chr4 (234-313)||(19882657-19882738)
chr4 (223-313)||(12578256-12578348)
chr4 (232-313)||(13692668-13692751)
chr4 (236-313)||(13992879-13992958)
chr4 (236-313)||(17216834-17216913)
chr4 (232-292)||(21323874-21323934)
chr4 (46-133)||(17216944-17217031)
chr4 (223-313)||(5679222-5679314)
chr4 (59-132)||(15164891-15164964)
chr4 (36-133)||(17337012-17337110)
chr4 (232-313)||(19492699-19492782)
chr4 (234-313)||(25121227-25121307)
chr4 (233-313)||(11490549-11490631)
chr4 (36-115)||(17709896-17709975)
chr4 (248-312)||(24639469-24639535)
chr4 (232-313)||(13128873-13128956)
chr4 (45-129)||(17672132-17672214)
chr4 (233-313)||(7582314-7582396)
chr4 (36-119)||(13908992-13909076)
chr4 (232-290)||(15164809-15164867)
chr4 (234-313)||(20315017-20315098)
chr4 (36-133)||(24639338-24639435)
chr4 (223-292)||(17337125-17337194)
chr4 (233-289)||(11933461-11933517)
chr4 (232-292)||(16730398-16730458)
chr4 (31-119)||(19562047-19562136)
chr4 (36-119)||(19492589-19492673)
chr4 (223-313)||(19092312-19092404)
chr4 (231-292)||(25097875-25097936)
chr4 (36-125)||(26115783-26115871)
chr4 (88-132)||(14649021-14649064)
chr4 (88-132)||(16730330-16730374)
chr4 (262-294)||(22345058-22345090)
[»] chr8 (31 HSPs)
chr8 (232-313)||(29382360-29382443)
chr8 (233-313)||(13314992-13315074)
chr8 (233-313)||(14528166-14528248)
chr8 (234-309)||(30122156-30122232)
chr8 (233-313)||(2637615-2637697)
chr8 (232-313)||(24269615-24269697)
chr8 (31-119)||(16404039-16404127)
chr8 (36-112)||(24110547-24110623)
chr8 (232-313)||(24114281-24114364)
chr8 (234-313)||(24644855-24644935)
chr8 (234-313)||(5850958-5851039)
chr8 (232-294)||(16403950-16404012)
chr8 (231-310)||(17509266-17509347)
chr8 (235-292)||(15238839-15238896)
chr8 (34-119)||(18569193-18569278)
chr8 (31-115)||(19264173-19264258)
chr8 (227-312)||(21314641-21314728)
chr8 (36-128)||(13314869-13314962)
chr8 (36-119)||(24114161-24114244)
chr8 (36-79)||(24269775-24269818)
chr8 (233-313)||(34497132-34497214)
chr8 (234-313)||(14075611-14075692)
chr8 (232-303)||(27659472-27659545)
chr8 (38-119)||(44010903-44010984)
chr8 (228-289)||(6885000-6885061)
chr8 (223-292)||(13697895-13697964)
chr8 (231-313)||(18448540-18448624)
chr8 (267-313)||(30783775-30783823)
chr8 (261-313)||(44011052-44011105)
chr8 (236-313)||(17101896-17101975)
chr8 (36-104)||(26394576-26394644)
[»] scaffold0671 (2 HSPs)
scaffold0671 (31-119)||(569-657)
scaffold0671 (232-294)||(480-542)
[»] scaffold0102 (2 HSPs)
scaffold0102 (228-335)||(35531-35641)
scaffold0102 (36-133)||(35663-35759)
[»] scaffold0016 (1 HSPs)
scaffold0016 (232-310)||(3551-3631)
[»] scaffold0650 (1 HSPs)
scaffold0650 (234-334)||(6282-6385)
[»] scaffold0638 (2 HSPs)
scaffold0638 (38-119)||(701-783)
scaffold0638 (231-312)||(821-904)
[»] scaffold0427 (1 HSPs)
scaffold0427 (233-289)||(2818-2874)
[»] scaffold0155 (2 HSPs)
scaffold0155 (228-313)||(35990-36077)
scaffold0155 (36-133)||(35871-35968)
[»] scaffold0035 (2 HSPs)
scaffold0035 (232-313)||(69930-70013)
scaffold0035 (45-119)||(70050-70125)
[»] scaffold0019 (1 HSPs)
scaffold0019 (233-312)||(181706-181786)
[»] scaffold0136 (1 HSPs)
scaffold0136 (262-337)||(15494-15572)
[»] scaffold0056 (2 HSPs)
scaffold0056 (36-119)||(21403-21486)
scaffold0056 (31-119)||(25113-25201)
[»] scaffold0622 (1 HSPs)
scaffold0622 (228-313)||(745-833)
[»] scaffold0054 (1 HSPs)
scaffold0054 (31-119)||(72148-72237)
[»] scaffold0024 (2 HSPs)
scaffold0024 (50-119)||(39724-39792)
scaffold0024 (254-313)||(39601-39662)
[»] scaffold0001 (1 HSPs)
scaffold0001 (228-338)||(69073-69185)
[»] scaffold0957 (1 HSPs)
scaffold0957 (267-313)||(3170-3217)
[»] scaffold0838 (1 HSPs)
scaffold0838 (233-292)||(2410-2469)
[»] scaffold0832 (1 HSPs)
scaffold0832 (233-292)||(2441-2500)
[»] scaffold0034 (1 HSPs)
scaffold0034 (31-119)||(76542-76631)
[»] scaffold0008 (1 HSPs)
scaffold0008 (223-313)||(54877-54970)
[»] scaffold0043 (1 HSPs)
scaffold0043 (233-313)||(89854-89935)
[»] scaffold0653 (1 HSPs)
scaffold0653 (234-290)||(4484-4540)
[»] scaffold0062 (1 HSPs)
scaffold0062 (88-132)||(43156-43199)
[»] scaffold0005 (1 HSPs)
scaffold0005 (88-132)||(168228-168271)


Alignment Details
Target: chr2 (Bit Score: 375; Significance: 0; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 50 - 464
Target Start/End: Original strand, 9774152 - 9774566
Alignment:
Q  50 taaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctttggatacgatactccac 149  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  9774152 taaccgcttcttacttttcttcaaccaaaatagataagcttgctctgttgtaaacatataacaattgcaaatctctaaccctttggatacgatactctac 9774251  T
Q  150 ttatcacttatctgaaaataagcaacgcgaattgtaaacgtgctcgttaactaaaaacaaataaaatacttgctcgttaactaaaaataagtaacgcgaa 249  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9774252 ttatcacttatctgaaaataagcaacacgaattgtaaacgtgcttgttaactaaaaacaaataaaatacttgctcgttaactaaaaataagtaacgcaaa 9774351  T
Q  250 ttggttggacaaaacggcaatccatgtggatacgatactctacatcactttattccttggtaaaggttcgatacatttgcctaatccgctacatcactaa 349  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9774352 ttggttggacaaaacgacaatccatgtggatacgatactctacatcactttattccttggtaacggttcgatacatttgcctaatccgctacatcactaa 9774451  T
Q  350 acaggcgtctttatgcatttatgtggtatacaattttcgctattgcagaaacagataaaatgataaggttatctaagcaatggcggagctagggttatga 449  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9774452 ataggcgtctttatgcatttacgtggtatacaattttcgctattgcagaaacagataaaatgataaggttatctaagcaatggcggagctagggttatga 9774551  T
Q  450 caagggggaggccat 464  Q
    |||||||||||||||    
T  9774552 caagggggaggccat 9774566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 338
Target Start/End: Complemental strand, 25618665 - 25618548
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaaggttcga 320  Q
    |||| |||||||||||||| |||||||||| || ||| ||||| ||||||||||||||| ||||||||||  ||||||||||| |||||||| | || ||    
T  25618665 tcgtcaactaaaaataagttacgcgaattgtttagacgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaacgatttga 25618566  T
Q  321 tacatttgcctaatccgc 338  Q
    |||  |||||||||||||    
T  25618565 tacgcttgcctaatccgc 25618548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 228 - 338
Target Start/End: Original strand, 29719226 - 29719339
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgataca 324  Q
    ||||||||||||||||||||||||| ||| || ||||| |||||| ||||||||||||| |||||  ||||||||||| ||||||||| | || | ||||    
T  29719226 aactaaaaataagtaacgcgaattgtttgaacgaaacgacaatccttgtggatacgataatctacttatcactttattacttggtaaacgatttggtaca 29719325  T
Q  325 tttgcctaatccgc 338  Q
     |||||||||||||    
T  29719326 cttgcctaatccgc 29719339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 17743475 - 17743558
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| ||||||| |||||| |||||  |||||||||||||||||||||||||  ||||||||||| |||||||||    
T  17743475 aaaaataagtaacacgaattgtttggacgaaacgataatccatgtggatacgatactctacttatcactttattacttggtaaa 17743558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 29719104 - 29719206
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaa-atacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacc 129  Q
    |||| |||||||| ||||||||| ||| ||||||||||| |||||||| | |  ||| |||||||||||| | ||||||||||||||||| |||||||||    
T  29719104 gaggggattcgaagaatcctaactgctgcttacttttctgcaaccaaacacaggtaaacttgctctgttgcatacatataaaaattgcaactctctaacc 29719203  T
Q  130 ctt 132  Q
    |||    
T  29719204 ctt 29719206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 30411889 - 30411805
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| |||  ||| |||||||||||| ||||| |||||||||||||    
T  30411889 gattcgaaaaatcctaaccgctgcttacttttctgcaaccaaaa-acatgtaaacttgctctgttgcaaacagataaaaattgcaa 30411805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 27908996 - 27909093
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacccttt 133  Q
    |||||||| ||||||||||||| |||| |||||| ||||||||| |  ||| |||||||||||| ||||| |||||||||||||   |||||||||||    
T  27908996 gattcgaagaatcctaaccgctgcttaattttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacgttctaacccttt 27909093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 25618777 - 25618685
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaac 128  Q
    |||||||| ||| | ||||||| ||||||||||| ||||||||| |  ||| ||| |||||||| ||||| ||||||||||||||||||||||    
T  25618777 gattcgaagaattcgaaccgctgcttacttttctgcaaccaaaacaggtaaactttctctgttgcaaacagataaaaattgcaaatctctaac 25618685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 29143176 - 29143088
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| |||| ||||||||  |||||||||| |||||||||||  ||| |||||||||||| ||||| |||||||||||||    
T  29143176 gaggggattcgaagaatcttaaccgctgtttacttttctacaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaa 29143088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 15339465 - 15339363
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaat-acataagcttgctctgttgtaaacatataaaaattgcaaatctctaacc 129  Q
    |||| |||| ||| ||||||||| ||| ||||||||||| |||| ||||  | |||| |||||||||||| ||||| ||||||||||||| |||||||||    
T  15339465 gaggggatttgaagaatcctaactgctgcttacttttctgcaacaaaaaacagataaacttgctctgttgcaaacaaataaaaattgcaactctctaacc 15339366  T
Q  130 ctt 132  Q
    |||    
T  15339365 ctt 15339363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 15339333 - 15339229
Alignment:
Q  237 taagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgcctaa 333  Q
    |||||||||| ||||| |||||| ||||| ||||||||||||||| ||||||||||   |||||||||| ||||||||| | || | |||| ||||||||    
T  15339333 taagtaacgctaattgtttggacgaaacgacaatccatgtggatatgatactctacttttcactttattacttggtaaatgatttggtacacttgcctaa 15339234  T
Q  334 tccgc 338  Q
    |||||    
T  15339233 tccgc 15339229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 17349455 - 17349374
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    ||||||||||||||||| || |||||| ||||| |||||  ||||||||||||||||||| | ||||||||| |||||||||    
T  17349455 aaaataagtaacgcgaaatgtttggacgaaacgacaatctttgtggatacgatactctacttacactttattacttggtaaa 17349374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 20174630 - 20174717
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| ||||||||||||  |||||| |||||| ||||| ||||||||||||| | ||||||||||  ||||||||||| |||||||||    
T  20174630 aacttaaaataagtaacatgaattgtttggacgaaacgacaatccatgtggaaatgatactctacttatcactttattacttggtaaa 20174717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 45621880 - 45621963
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| ||||||| |||||| ||||| |||||| ||| |||||||||||||||   |||||||||| |||||||||    
T  45621880 aaaaataagtaacacgaattgtttggacgaaacgacaatccttgtagatacgatactctacttctcactttattacttggtaaa 45621963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 25888219 - 25888302
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| |||||||||||||||||||| |||    ||||| |||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  25888219 aacttaaaataagtaacgcgaattgtttg----aaacgacaatccatgtggatacgatactgtacttatcactttattacttggtaaa 25888302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 28925743 - 28925660
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| |||||||||| || ||||||||||| ||||||||| |  ||| |||||| ||||| ||||| |||||||||||||    
T  28925743 gattcgaagaatcctaacctctgcttacttttctgcaaccaaaacaggtaaacttgctatgttgcaaacaaataaaaattgcaa 28925660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 17675507 - 17675589
Alignment:
Q  37 attcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||||||||| |||||||||  ||| |||||| ||||||||| |  ||| |||||||||||| ||||| |||||||||||||    
T  17675507 attcgaaaaattctaaccgctgtttatttttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 17675589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 25887805 - 25887878
Alignment:
Q  60 ttacttttcttcaaccaaaa-tacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacccttt 133  Q
    |||||||||| ||||||||| ||  ||| |||||||||||| ||||| |||||||||||||||||||||||||||    
T  25887805 ttacttttctgcaaccaaaaataggtaa-cttgctctgttgcaaacagataaaaattgcaaatctctaacccttt 25887878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 25196111 - 25196027
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||| |||||| |||||| ||| | ||| || |||||||| ||||||||||  ||||||||||| |||||||||    
T  25196111 taaaaataagtaacgtgaattgtttggacgaaaggacaacccctgtggatatgatactctacttatcactttattacttggtaaa 25196027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 32085572 - 32085480
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| |||| |||||||||||| |||  || || ||| ||||| ||||||||||||||| ||||||||||  ||||||||||| |||||||||    
T  32085572 tcgtcaacttaaaataagtaacacgagctgtttagacgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaa 32085480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 12953293 - 12953353
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||||||||||||| || ||| ||||| ||||||||||||| || |||||||||    
T  12953293 aaaaataagtaacgcgaattgttttgacgaaacgacaatccatgtggacacaatactctac 12953353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 25920366 - 25920306
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||||||||||||| |||||| | |||| ||| | ||||||||||||||||||||||||||    
T  25920366 aaaaataagtaacgagaattgttcggacgaaaggacaatccatgtggatacgatactctac 25920306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 27909118 - 27909201
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||| |||||| |||||  ||||   || ||||||||||||||||||||||  ||||||||||| |||||||||    
T  27909118 aaaaataagtaacgtgaattgtttggatgaaacaataacccatgtggatacgatactctacttatcactttattacttggtaaa 27909201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 31804899 - 31804982
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| |  ||||||||||| |||||||||||  ||||||||| |||||||||  |||||||||||  ||||||||    
T  31804899 aaaaataagtaacacagattggttggacgaaacggcaatctctgtggatacaatactctacttatcactttattatttggtaaa 31804982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 26603237 - 26603320
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||| |||  ||| | |||||||||| ||||| |||||||||||||    
T  26603237 gattcgaagaatcctaaccgctgcttacttttctacaaccaaaa-acaggtaaac-tgctctgttgcaaacagataaaaattgcaa 26603320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 9762311 - 9762348
Alignment:
Q  16 aatataaatggggtggaggagattcgaaaaatcctaac 53  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9762311 aatataaatggggtggaggagattcgaaaaatcataac 9762348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 17743348 - 17743451
Alignment:
Q  30 ggaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaaatctctaa 127  Q
    ||||||||||| || ||||||||||||  ||| ||||||| ||||||||| |||  ||| ||||||  |||| ||| | ||||||||||||| |||||||    
T  17743348 ggaggagattcaaataatcctaaccgcggcttccttttctacaaccaaaa-acaggtaaacttgcttagttgcaaaaagataaaaattgcaactctctaa 17743446  T
Q  128 ccctt 132  Q
    |||||    
T  17743447 ccctt 17743451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 32085673 - 32085594
Alignment:
Q  47 tcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaac 128  Q
    ||||||||||| ||||||||||| ||||||||  |  ||| |||||||||||| ||||| ||||||||||| ||||||||||    
T  32085673 tcctaaccgctgcttacttttctgcaaccaaaccaggtaa-cttgctctgttgcaaacagataaaaattgc-aatctctaac 32085594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 25196229 - 25196153
Alignment:
Q  39 tcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaatt 115  Q
    ||||| |||||||||| || ||||||||| | ||||||||| |  ||| |||||| ||||| |||||||||||||||    
T  25196229 tcgaagaatcctaaccactgcttacttttttgcaaccaaaacaggtaaacttgctatgttgcaaacatataaaaatt 25196153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 30411778 - 30411695
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||| ||||| | |||| ||| | |||||| ||| |||||||||||||||  ||||||||||| | |||||||    
T  30411778 aaaaataagtaacgcaaattgttgggacgaaatgacaatccctgttgatacgatactctacttatcactttattacatggtaaa 30411695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 17349575 - 17349486
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| ||| || |||||| ||||||||| | ||||||||| |||  ||| |||||||||||| ||||| |||||||||||||    
T  17349575 gaggggattcgaagaattctgaccgctgcttacttttttgcaaccaaaa-acaagtaaacttgctctgttgcaaacagataaaaattgcaa 17349486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 24090925 - 24090984
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta 291  Q
    |||||||||||||  |||||| |||||| ||| | |||||||||||||||||||| ||||    
T  24090925 aaaaataagtaacaagaattgtttggacgaaaggacaatccatgtggatacgatattcta 24090984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 25530657 - 25530574
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| ||||||||||||| |||||| || | ||||||||| |  |||  | ||||||||| ||||| |||||||||||||    
T  25530657 gattcgaagaatcctaaccgctgcttactattttgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 25530574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 308
Target Start/End: Complemental strand, 25535374 - 25535296
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttg 308  Q
    |||||||||||||  |||||| | |||| ||| | |||||| |||||||||||||||||||  ||||||||||| ||||    
T  25535374 aaaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctacttatcactttattacttg 25535296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 11382748 - 11382825
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttatt 303  Q
    ||||||||||||||||||||||||  |||||  |||   |||| |||||||||| ||||||||||  |||||||||||    
T  11382748 aactaaaaataagtaacgcgaattatttggatgaaaatacaattcatgtggatatgatactctacttatcactttatt 11382825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 17635653 - 17635735
Alignment:
Q  37 attcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||||||||| ||||| |||  ||| || ||| ||||||||| |  ||| |||||||||||| ||||| |||||||||||||    
T  17635653 attcgaaaaattctaactgctgtttatttatctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 17635735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 11382682 - 11382722
Alignment:
Q  88 cttgctctgttgtaaacatataaaaattgcaaatctctaac 128  Q
    |||||||||||| ||||| |||||| |||||||||||||||    
T  11382682 cttgctctgttgcaaacagataaaatttgcaaatctctaac 11382722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 17198083 - 17198035
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    |||| |||||||| |||| |||||||| ||||||||||| |||||||||    
T  17198083 gaggggattcgaagaatcttaaccgctgcttacttttctgcaaccaaaa 17198035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 17890135 - 17890076
Alignment:
Q  59 cttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||| ||||| ||||||||| |  ||| |||||||||||| |||||||||||||||||||    
T  17890135 cttacatttctgcaaccaaaacaggtaa-cttgctctgttgcaaacatataaaaattgcaa 17890076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 29143061 - 29143001
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||||||||||||| | | || ||  | ||||||||||||||||| ||||||||    
T  29143061 aaaaataagtaacgcgaattgttcgaacgaacggacaatccatgtggatacggtactctac 29143001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 13345331 - 13345418
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||  ||||||||||| |||||||||    
T  13345331 aactataaataagtaacgcgaattgtttggacaaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaa 13345418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 12208701 - 12208618
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||||||| |||||| ||||| ||||||||||||||| |||| |||||  ||||||||||| |||||||||    
T  12208701 aaaaataagtaacgcgaattgtttggacgaaacgacaatccatgtggatatgatattctacttatcactttattacttggtaaa 12208618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 17610255 - 17610338
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||  || |||||||| |||||||||    
T  17610255 aaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacgatactctacttataactttattacttggtaaa 17610338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 21666606 - 21666687
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggt 310  Q
    ||||||||||||||| |||||| |||||| ||| | ||||||||||||||||||||||||||  ||||||||||| ||||||    
T  21666606 taaaaataagtaacgagaattgtttggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttggt 21666687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 9401605 - 9401525
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacatcactttattccttggtaaa 313  Q
    ||||||||||||||||||||| |||||| ||||| |||| ||||||||||||||||||||| | |||||||| | |||||||    
T  9401605 aaaaataagtaacgcgaattgtttggacgaaacgacaattcatgtggatacgatactctac-ttactttattacctggtaaa 9401525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 229 - 303
Target Start/End: Original strand, 51473872 - 51473948
Alignment:
Q  229 actaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttatt 303  Q
    |||||||| ||||||||| ||||| |||||||||||| |||||||| |||||||||||||||||  |||||||||||    
T  51473872 actaaaaacaagtaacgcaaattgtttggacaaaacgacaatccatatggatacgatactctacttatcactttatt 51473948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 29242732 - 29242645
Alignment:
Q  32 aggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||||||| ||  |||||||||||||||||||||| | ||||||||| |  ||| |||||||||||| ||||| |||||||||||||    
T  29242732 aggagattcaaagtatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 29242645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 3591654 - 3591735
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa 313  Q
    |||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||   ||||||||||| |||| ||||    
T  3591654 aaataagtaaggcgaattgtttggacaaaacgacaatctatgtggatacgatactctatttatcactttattacttgataaa 3591735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 9401732 - 9401634
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacc 129  Q
    |||| |||||||| ||||||||||||| ||||||||| |  |||||||| |  ||| ||| |||||||| ||||| ||||||||||||| |||||||||    
T  9401732 gaggggattcgaagaatcctaaccgctacttacttttttgtaaccaaaacaggtaaacttactctgttgcaaacagataaaaattgcaactctctaacc 9401634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 16787725 - 16787808
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||| ||||| |||| ||||||| ||||| ||||| ||||||||||||||  ||||||||||| |||| ||||    
T  16787725 aaaaataagtaacgcaaattgtttgggcaaaacgacaatctatgtgaatacgatactctacttatcactttattacttgataaa 16787808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 25405629 - 25405712
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||| ||| || |||||| ||||| |||||| ||||||||||||||| |||  ||||||||||| |||||||||    
T  25405629 aaaaataagtaacgtgaactgtttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaa 25405712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 17837615 - 17837534
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||||| || ||||||| | |||||| |||||||| ||||||||||  || |||||||| |||||||||    
T  17837615 aaataagtaacgcgaattgtttagacaaaatgacaatccttgtggatatgatactctacttataactttattacttggtaaa 17837534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 236 - 313
Target Start/End: Complemental strand, 21847729 - 21847651
Alignment:
Q  236 ataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    |||||||||| |||||| |||||| ||||| |||||||||||||||| ||||||||| |  |||||||| |||||||||    
T  21847729 ataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacaatactctacttagactttattacttggtaaa 21847651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 334
Target Start/End: Complemental strand, 24281381 - 24281272
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgataca 324  Q
    |||| |||||||||||||| ||||| | ||| ||||||  |||||||||||||| |||| |||||  ||||||||||| ||||||||| | || | ||||    
T  24281381 aacttaaaataagtaacgcaaattgttcggaaaaaacgataatccatgtggatatgataatctacttatcactttattacttggtaaacgatttggtaca 24281282  T
Q  325 tttgcctaat 334  Q
    ||||||||||    
T  24281281 tttgcctaat 24281272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 17610142 - 17610213
Alignment:
Q  45 aatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaatt 115  Q
    ||||||||||||| ||||||||||| ||||||||| |||  ||| |||||||||||| |||||||||||||||    
T  17610142 aatcctaaccgctgcttacttttctgcaaccaaaa-acaggtaaacttgctctgttgcaaacatataaaaatt 17610213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 15543965 - 15544048
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| ||||||| |||||| ||||| ||||    ||||||||||||||||||  ||||||||||| |||||||||    
T  15543965 aaaaataagtaacacgaattgtttggacgaaacgacaatttccgtggatacgatactctacttatcactttattacttggtaaa 15544048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 21449189 - 21449106
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||   ||||| |||| | ||||| |||||| |||||||||||||||||||  ||||||||||| |||||||||    
T  21449189 aaaaataagtaacataaattgtttggccgaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaa 21449106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 22623117 - 22623029
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||| ||| ||||||||| ||| ||||||||||| ||||||||| |  ||| |||||||||||| ||| |||||||||| ||||    
T  22623117 gaggggatttgaagaatcctaacagctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatatataaaaatggcaa 22623029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 23038007 - 23038093
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| ||||||||||||| || ||| || ||| ||||| ||||||||||||||||||||||| ||  ||||||||||| |||||||||    
T  23038007 aacttaaaataagtaacgagagttgttttgacgaaacgacaatccatgtggatacgatactc-acttatcactttattacttggtaaa 23038093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 28008329 - 28008231
Alignment:
Q  33 ggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||| || ||||||||||||| ||||||||||| ||||||||| |  |||  ||||||| ||| ||||| ||||||||||| ||||||||| ||||    
T  28008329 ggagattcaaagaatcctaaccgctgcttacttttctgcaaccaaaacaagtaa-tttgctctattggaaacagataaaaattgc-aatctctaatcctt 28008232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 16179219 - 16179144
Alignment:
Q  45 aatcctaaccgcttcttacttttcttcaacc-aaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||||||||||| ||||||||||| ||||| ||||||  ||| |||||||||||| || || |||||||||||||    
T  16179219 aatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaatcagataaaaattgcaa 16179144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 51473780 - 51473846
Alignment:
Q  62 acttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacc 129  Q
    |||||||| ||||||||||| |||| |||| | ||||| ||||| |||||||||||||||||||||||    
T  51473780 acttttctgcaaccaaaatagataa-cttgatatgttgcaaacagataaaaattgcaaatctctaacc 51473846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 16069440 - 16069518
Alignment:
Q  37 attcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaatt 115  Q
    ||||||| ||||||||| ||| ||||||||||| ||||||||| |  ||| |||||||||||| || || |||||||||    
T  16069440 attcgaagaatcctaactgctgcttacttttctacaaccaaaacaggtaaacttgctctgttgcaagcagataaaaatt 16069518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 315
Target Start/End: Original strand, 21987981 - 21988066
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaagg 315  Q
    ||||||||||||||||||||| |||||| ||| | |||||   | ||||||||||||||||  |||||||||||  ||||||||||    
T  21987981 aaaaataagtaacgcgaattgattggacgaaatgacaatctccgaggatacgatactctacttatcactttattatttggtaaagg 21988066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 24306307 - 24306387
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||||  ||||   ||||| |||||| |||||||||||||||||||  ||||||||||| |||||||||    
T  24306307 aaataagtaacgcgaattatttggttgaaacg-caatccctgtggatacgatactctacttatcactttattacttggtaaa 24306387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 16916931 - 16916992
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||||||| |||||| | |||| ||| | |||||| |||||||||||||||||||    
T  16916931 taaaaataagtaacgagaattgttcggacgaaaggacaatccctgtggatacgatactctac 16916992  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 22664417 - 22664333
Alignment:
Q  47 tcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    ||||||||||| ||||||||||| ||||||||| |  ||| |||||||||||  ||||| ||||||||||||| |  |||||||||    
T  22664417 tcctaaccgctacttacttttctgcaaccaaaacatgtaa-cttgctctgttacaaacaaataaaaattgcaatttactaaccctt 22664333  T

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Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 12012803 - 12012906
Alignment:
Q  236 ataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgccta 332  Q
    ||||||||||||||| | || || |||||| |||| ||||||||||| |||||||||  ||||||||| | |||| |||| | || |||||| |||||||    
T  12012803 ataagtaacgcgaatagtttagataaaacgacaattcatgtggatacaatactctacttatcactttaatacttgataaacgatttgatacacttgccta 12012902  T
Q  333 atcc 336  Q
    ||||    
T  12012903 atcc 12012906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 14779764 - 14779704
Alignment:
Q  59 cttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||||||||||||||||||| |  ||| |||| | ||||||||||| |||||||||||||    
T  14779764 cttacttttcttcaaccaaaacaagtaaacttgatatgttgtaaacaaataaaaattgcaa 14779704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 17121377 - 17121421
Alignment:
Q  35 agattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||    
T  17121377 agattcgaagaatcctaaccgctgcttacttttctgcaaccaaaa 17121421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 338
Target Start/End: Complemental strand, 17359264 - 17359153
Alignment:
Q  230 ctaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatt 326  Q
    |||||||||||||||| |||||  |||||| ||||| |||||  | |||||| ||||||| ||  ||||||||||| ||||||||| | || | |||| |    
T  17359264 ctaaaaataagtaacgagaattatttggacgaaacgacaatctttatggatatgatactcaacttatcactttattacttggtaaacgatttggtacact 17359165  T
Q  327 tgcctaatccgc 338  Q
    ||||||||||||    
T  17359164 tgcctaatccgc 17359153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 17359388 - 17359286
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaaatctctaac 128  Q
    |||| |||||||| |||||||||||| |||||||||| | ||||||||| |||  |||  ||||| |||||  | || ||||||||||||| ||||||||    
T  17359388 gaggggattcgaagaatcctaaccgcatcttacttttatgcaaccaaaa-acaggtaaatttgctatgttgccagcagataaaaattgcaactctctaac 17359290  T
Q  129 cctt 132  Q
    ||||    
T  17359289 cctt 17359286  T

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Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 18100891 - 18100985
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    ||||| || |||| |||||||| ||||||||||| ||||||||| |  ||| |||||| ||||| ||||| ||||||||||| ||| ||||||||||    
T  18100891 gattcaaataatcataaccgctgcttacttttctgcaaccaaaacatgtaa-cttgctatgttgcaaacagataaaaattgc-aatttctaaccctt 18100985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 18736239 - 18736322
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||  ||||| ||| || ||||| |||||| |||||||||||||| ||||  ||||||||||| |||| ||||    
T  18736239 aaaaataagtaacggaaattgtttgaacgaaacgacaatccctgtggatacgatacactacttatcactttattacttgttaaa 18736322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 18825870 - 18825782
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| ||||| || |||||| | |||| ||||||||||| ||||||||| |  |||  ||||| ||||||||||| |||||||||||||    
T  18825870 gaggggattcaaagaatccttatcgctgcttacttttctacaaccaaaacaagtaaatttgctttgttgtaaacagataaaaattgcaa 18825782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 23180011 - 23179923
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| |||||| |||||| ||||||||||| ||||||||| |  |||  ||| | | ||||||||| |||||||||||||    
T  23180011 gaggggattcgaataatccttaccgctgcttacttttctccaaccaaaaaaggtaaaattgttattttgtaaacagataaaaattgcaa 23179923  T

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Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 29242619 - 29242536
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||| ||||||||||||| |||||  ||||| |||||  | |||||||||||||||||  ||||||||||| |||| ||||    
T  29242619 aaaaatatgtaacgcgaattgtttggatgaaacgacaatcactatggatacgatactctacttatcactttattacttgataaa 29242536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 13345215 - 13345258
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||    
T  13345215 gattcgaaaaatcctaaccgctgtttacttttcttaaaccaaaa 13345258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 21334595 - 21334638
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    |||||||| |||||||||||||  ||||||||||||||||||||    
T  21334595 gattcgaagaatcctaaccgctgtttacttttcttcaaccaaaa 21334638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 21449299 - 21449218
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattg 116  Q
    |||||||| ||||||||||||| ||||||||||| || |||||| |||  ||| |||||| ||||| ||||| ||||||||||    
T  21449299 gattcgaagaatcctaaccgctgcttacttttctgcatccaaaa-acagttaaacttgctatgttgcaaacagataaaaattg 21449218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 31235935 - 31236023
Alignment:
Q  45 aatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||| |||||| | ||||||||| | ||||||||| |||  ||| |||||||||||| ||| | ||||||||||||| ||||||||||||    
T  31235935 aatcttaaccgttgcttacttttatgcaaccaaaa-acaagtaaacttgctctgttgcaaagagataaaaattgcaactctctaaccctt 31236023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 12208823 - 12208754
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaaca 105  Q
    |||||||| ||||||||||||| ||||||||||| || | |||| |  ||| |||||||||||| |||||    
T  12208823 gattcgaagaatcctaaccgctgcttacttttctgcagctaaaacaggtaaacttgctctgttgcaaaca 12208754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 25405517 - 25405591
Alignment:
Q  45 aatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||||||||||| |||||||| || ||||||||| |||  ||| |||||||||||| ||||| |||||||||||||    
T  25405517 aatcctaaccgctgcttacttt-ctgcaaccaaaa-acaagtaaacttgctctgttgcaaacaaataaaaattgcaa 25405591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 31236046 - 31236130
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||||||||||  |||||||||||| |||||  ||| ||||  ||||||| |  ||||||||||| ||| |||||    
T  31236046 taaaaataagtaacgcgaattatttggacaaaacgacaatctttgtagatataatactctgcttatcactttattacttagtaaa 31236130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 15813519 - 15813583
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||||||||| ||||||| ||  |  ||||| |||||| ||||||||| |||||||||    
T  15813519 aactaaaaataagtaacacgaattgtttcaaagaaacgacaatccttgtggatacaatactctac 15813583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 16787657 - 16787693
Alignment:
Q  89 ttgctctgttgtaaacatataaaaattgcaaatctct 125  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  16787657 ttgctatgttgcaaacatataaaaattgcaaatctct 16787693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 16916818 - 16916866
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    |||| |||||||| ||||||| ||||| ||||||||||| |||||||||    
T  16916818 gaggggattcgaagaatcctacccgctgcttacttttctgcaaccaaaa 16916866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 20744547 - 20744643
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||| |  ||| |||||| ||||| ||||| ||||||||||||| ||||||||||||    
T  20744547 gattcgaagaatcctaaccgctgcttacttttctacaaccaaaacaggtaaacttgctatgttgcaaacagataaaaattgcaactctctaaccctt 20744643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 19004225 - 19004308
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||| |||||| |||||||||| | ||||||||||||||||||||||| ||  ||||||||||| |||||||||    
T  19004225 aaaaataagtaacgtgaattgtttggacaaaatgacaatccatgtggatacgatactccacttatcactttattacttggtaaa 19004308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 39434563 - 39434479
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||||||||||  |||||  |||| |||||| |||||||||    
T  39434563 taaaaataagtaacgcgaattgtttggacaaaaggacaatccatgtggatacgattttctacttatcaatttattacttggtaaa 39434479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 17432103 - 17432008
Alignment:
Q  37 attcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||| |  ||| |||||||||||| ||||| | ||||||| ||| ||| ||||||||    
T  17432103 attcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacagaaaaaaattacaactctttaaccctt 17432008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 24245543 - 24245625
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaa 312  Q
    ||||||||||||||||| ||| |||||| ||||| |||||| |||||||||||||||||||  ||||||||||| | ||||||    
T  24245543 aaaaataagtaacgcgagttgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttattacatggtaa 24245625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 15690881 - 15690804
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttatt 303  Q
    |||||||||||||||||| ||||||||||||| ||||| |||| |  ||||||||||||||||||  |||||||||||    
T  15690881 aactaaaaataagtaacgagaattggttggacgaaacgacaattctcgtggatacgatactctacttatcactttatt 15690804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 24260728 - 24260643
Alignment:
Q  45 aatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccct 131  Q
    |||| |||||||| || || ||||| |||||||||||  ||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  24260728 aatcataaccgctcctaacatttctgcaaccaaaataggtaa-cttgctctgttgcaaacagataaaaattgcaaatctctaaccct 24260643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 20315428 - 20315512
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||| |||||||||| |||||| ||| |  |||||||||||||||||||||||||  ||||| ||||| |||||||||    
T  20315428 taaaaataagttacgcgaattgtttggacgaaaggataatccatgtggatacgatactctacttatcacattattacttggtaaa 20315512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 24266955 - 24267036
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    |||||||||||| ||||||| |||||||||| |  ||||| ||||||||||||||||||| | ||||||||| |||||||||    
T  24266955 aaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctacttacactttattacttggtaaa 24267036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 24343586 - 24343667
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    |||||||||||| ||||||| |||||||||| |  ||||| ||||||||||||||||||| | ||||||||| |||||||||    
T  24343586 aaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctacttacactttattacttggtaaa 24343667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 34487736 - 34487655
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    |||||||||||||||||||| || ||| ||||| ||||||||||||||| |||| ||||| | ||||||||| |||||||||    
T  34487736 aaaataagtaacgcgaattgtttagacgaaacgacaatccatgtggatatgatattctacttacactttattacttggtaaa 34487655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 36175356 - 36175261
Alignment:
Q  34 gagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccct 131  Q
    ||||||| || |||| |||||||||||||||||||| ||||||||| |  ||| |||||| ||||| ||||| ||||||||||| |||||||||||||    
T  36175356 gagattcaaagaatcataaccgcttcttacttttctacaaccaaaacaggtaa-cttgctttgttgaaaacagataaaaattgc-aatctctaaccct 36175261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 17171553 - 17171635
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||| |||||||||||| || ||| ||||| ||||||||||||||||||| ||||||  ||||||||||| |||| ||||    
T  17171553 aaaataattaacgcgaattgcttagacgaaacgacaatccatgtggatacgatgctctacttatcactttattacttgataaa 17171635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 20563964 - 20564053
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| ||||||||| ||||||||||||||| ||||||||| |||  |||  ||||||||||| ||||| |||||||||||||    
T  20563964 gaggtgattcgaagaatcctaactgcttcttacttttctgcaaccaaaa-acaagtaaatttgctctgttgcaaacagataaaaattgcaa 20564053  T

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Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 18208249 - 18208355
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa-ggttcgatacatttgcc 330  Q
    ||||||||||||  |||||| |||||| ||| | |||||||||||||||||||||||||| | ||||||||| ||| ||||| | || | |||| |||||    
T  18208249 aaaataagtaacatgaattgtttggacgaaaggacaatccatgtggatacgatactctacttacactttattactttgtaaacgatttggtacacttgcc 18208348  T
Q  331 taatccg 337  Q
    |||||||    
T  18208349 taatccg 18208355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 335
Target Start/End: Original strand, 25550504 - 25550609
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgc 329  Q
    ||||||||||||  |||||| |||||| ||| | |||||| |||||||| ||||||||||  ||||||||||| ||||||||| | || |||||| ||||    
T  25550504 aaaataagtaacaagaattgtttggacgaaatgacaatccctgtggatatgatactctacttatcactttattacttggtaaacgatttgatacacttgc 25550603  T
Q  330 ctaatc 335  Q
    ||||||    
T  25550604 ctaatc 25550609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 310
Target Start/End: Original strand, 23388837 - 23388917
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggt 310  Q
    |||||||||||||  |||||| | |||| ||| | ||||||||||||||||||||||||||  ||||||||||| ||||||    
T  23388837 aaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttggt 23388917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 24140543 - 24140459
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||| ||||||||||||| |||||| ||| | ||||||  |||||||| |||||||||  ||||||||||| |||||||||    
T  24140543 taaaaatatgtaacgcgaattgtttggacgaaaggacaatcccagtggatacaatactctacttatcactttattacttggtaaa 24140459  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 36175233 - 36175151
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac-atcactttattccttggtaaa 313  Q
    |||||||||||||||   ||| |||||| ||||| |||||| | ||||||||||||||||| | ||||||||| |||||||||    
T  36175233 aaaaataagtaacgcatgttgtttggacgaaacgacaatccttatggatacgatactctacaaacactttattacttggtaaa 36175151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 15690997 - 15690902
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacccttt 133  Q
    |||||||| |||||||||  || ||||||||||| ||||||||| |  |||  ||||||||||   |||| |||||||||||||||||||||||||||    
T  15690997 gattcgaagaatcctaaca-ctgcttacttttctgcaaccaaaacaggtaat-ttgctctgttacgaacaaataaaaattgcaaatctctaacccttt 15690902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 24140657 - 24140568
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctct 125  Q
    |||| ||| ||||||||||| | ||||||||||| |||||||||||  ||| |||||||||| | | ||| |||||||||| || |||||    
T  24140657 gatttgaagaatcctaaccgttgcttacttttctgcaaccaaaataggtaaacttgctctgtcgcacacagataaaaattggaagtctct 24140568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 24852173 - 24852253
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaa 312  Q
    |||||||||||| |||||| || ||| ||||  |||||||||||||||||||||| |||  |||| |||||| ||||||||    
T  24852173 aaataagtaacgtgaattgtttagacgaaacaacaatccatgtggatacgatactatacttatcattttattacttggtaa 24852253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 22755692 - 22755648
Alignment:
Q  88 cttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||    
T  22755692 cttgctctgttgcaaacagataaaaattgtaaatctctaaccctt 22755648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 15470034 - 15469928
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgcc 330  Q
    |||||| || || |||||| || ||| ||||| |||| |||||||||||||||||| ||  ||||||||||| ||||||||| | || | |||| |||||    
T  15470034 aaataaatagcgtgaattgtttagacgaaacgacaattcatgtggatacgatactcgacctatcactttattacttggtaaacgatttggtacacttgcc 15469935  T
Q  331 taatccg 337  Q
    |||||||    
T  15469934 taatccg 15469928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 20315307 - 20315390
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| || ||||| ||||||||||| || | ||||||||| |  ||| |||||| ||||| ||||| |||||||||||||    
T  20315307 gattcgaagaaccctaatcgcttcttactattttgcaaccaaaacatgtaaacttgctttgttgcaaacagataaaaattgcaa 20315390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 24245421 - 24245499
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaat 114  Q
    |||||||| ||||||||||| | ||||||||||| |||| |||| |  ||| |||||| ||||| ||||| ||||||||    
T  24245421 gattcgaagaatcctaaccgttgcttacttttctgcaactaaaacaggtaaacttgctttgttggaaacaaataaaaat 24245499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 17431984 - 17431900
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat--cactttattccttggtaaa 313  Q
    |||||||||||| || || ||| |||||  ||||| |||||  ||||||||||||||||||| |  ||||||||| |||||||||    
T  17431984 taaaaataagtagcgtgagttgtttggatgaaacgacaatctctgtggatacgatactctactttccactttattacttggtaaa 17431900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 19086181 - 19086261
Alignment:
Q  235 aataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||  |||||| || ||||||||  |||| ||||||||||  |||||||||  ||||||||||| |||||||||    
T  19086181 aataagtaacatgaattgatttgacaaaacaacaattcatgtggatataatactctacttatcactttattacttggtaaa 19086261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 34128857 - 34128788
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaaca 105  Q
    |||||||| ||||||||||| | ||||||||||| ||||||||| |  ||| |||||||| ||| |||||    
T  34128857 gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctattgcaaaca 34128788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 15375772 - 15375856
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa-tacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| ||||||||||| | ||||||||| | ||||||||| ||    | |||||||||||| ||||| |||||||||||||    
T  15375772 gattcgaagaatcctaaccgttacttacttttatgcaaccaaaaataggcgaacttgctctgttgcaaacaaataaaaattgcaa 15375856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 15375881 - 15375941
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||||||||||| || ||||  |||||| ||||| |||||| |||||||| ||||||||||    
T  15375881 aaaaataagtaatgcaaattttttggacgaaacgacaatccctgtggataggatactctac 15375941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 17315099 - 17315182
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||  |||||| | |||  ||| | |||||||||||||||||||||| |||  ||||||||||| |||| ||||    
T  17315099 aaaaataagtaactagaattgttcggaagaaaggacaatccatgtggatacgatactttacttatcactttattacttgataaa 17315182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 20549703 - 20549763
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||||||||||||  |||||| | |||| ||| | |||||| |||||||||||||||||||    
T  20549703 aaaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctac 20549763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 24260616 - 24260560
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatact 288  Q
    |||||||||||||||| |||  |||||| ||| | |||||| |||||||||||||||    
T  24260616 aaaaataagtaacgcggattttttggacgaaatgacaatccttgtggatacgatact 24260560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 25402332 - 25402396
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||| ||||||||||||||||||   | |||| ||||| |||||| ||||||||| |||||||||    
T  25402332 aacttaaaataagtaacgcgaatcattaggacgaaacgacaatccctgtggatacaatactctac 25402396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 9726120 - 9726014
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgcc 330  Q
    ||||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||||||  ||||||||||| ||||||||| | || | |||| |||||    
T  9726120 aaataagtaacgcaaattgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcc 9726021  T
Q  331 taatccg 337  Q
    |||||||    
T  9726020 taatccg 9726014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 9516885 - 9516802
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||||  ||||||||||| || ||||||    
T  9516885 aaaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattactaggtaaa 9516802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 27737566 - 27737662
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||| ||||||||||||| ||||||||| | |||| |||| |  ||| |||||||||||| ||||| ||||||||||||| ||||||||||||    
T  27737566 gattcgaagaatcctaaccgctgcttacttttttgcaacaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaactctctaaccctt 27737662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 21672425 - 21672517
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| ||||||||| ||||||| ||||||| |||||| ||| |  |||||||||||||||||||||||||  ||||||||||| |||||||||    
T  21672425 tcgtcaactaaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttggtaaa 21672517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 17827091 - 17827150
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta 291  Q
    ||||||||||||||||||||| |||||  ||||| |||||||||||||||||||||||||    
T  17827091 aaaaataagtaacgcgaattgtttggaagaaacgacaatccatgtggatacgatactcta 17827150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 23844342 - 23844440
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa-atctctaacccttt 133  Q
    |||||||||||||||||||||| ||||||||| | ||||||||| |  ||| |||| ||| ||| ||||| ||||||||||||| || |||||||||||    
T  23844342 gattcgaaaaatcctaaccgctgcttacttttatgcaaccaaaacaggtaaacttggtctattgcaaacagataaaaattgcaacatttctaacccttt 23844440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 303
Target Start/End: Complemental strand, 4339834 - 4339762
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttatt 303  Q
    ||||||||||| ||||||||||||||||||||| |||||  ||||||||| |||||||||  |||||||||||    
T  4339834 aaaataagtaatgcgaattggttggacaaaacgacaatcattgtggatacaatactctacttatcactttatt 4339762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 21679841 - 21679933
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| ||||||||| ||||||| ||||||| |||||| ||| |  |||||||||||||||||||||||||  ||||||||||| ||| |||||    
T  21679841 tcgtcaactaaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttagtaaa 21679933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 25782004 - 25781916
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| |||||||||  ||  |||||||||| |||||||||||  ||| |||||||||||| ||||| |||||||||||||    
T  25782004 gaggggattcgaagaatcctaactactgtttacttttctgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaa 25781916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 27737688 - 27737771
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||||||| |||||| ||||  |||||| ||||| || ||||||||||  ||||||||||| |||||||||    
T  27737688 aaaaataagtaacgcgaattgtttggacgaaacaacaatccttgtgggtatgatactctacttatcactttattacttggtaaa 27737771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 12183331 - 12183413
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| |||||| | |||| ||| | |||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  12183331 aaaataagtaacgtgaattgttaggacgaaatgacaatccatgtggatacgatactgtacttatcactttattacttggtaaa 12183413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 24252228 - 24252287
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta 291  Q
    |||||||||||||  |||||| |||||| ||||| |||||||||||||||||||||||||    
T  24252228 aaaaataagtaacaagaattgtttggactaaacgacaatccatgtggatacgatactcta 24252287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 25927305 - 25927410
Alignment:
Q  235 aataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgcct 331  Q
    ||||||||||| |||||| |||||| ||||   ||||||||||||||||||| |||||  ||||||||||| ||||||||| | || | |||| ||||||    
T  25927305 aataagtaacgtgaattgtttggacgaaactaaaatccatgtggatacgatattctacttatcactttattacttggtaaacgttttggtacacttgcct 25927404  T
Q  332 aatccg 337  Q
    ||||||    
T  25927405 aatccg 25927410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 18075382 - 18075470
Alignment:
Q  228 aactaaaaataagtaa-cgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||||| | |  |||| |||||||||||| ||||||| |||||||||||||||| |  ||||||||||| |||||||||    
T  18075382 aactaaaaataagtaaactcagattgtttggacaaaacgacaatccacgtggatacgatactctgcttatcactttattacttggtaaa 18075470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 20144994 - 20145083
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa-tacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| |||||| |||||| ||| ||||||| |||| |||| ||| ||| ||| |||||||| |||||||||||||||||||    
T  20144994 gaggggattcgaagaatccttaccgctgcttgcttttctgcaactaaaaatacgtaaactttctctgttgcaaacatataaaaattgcaa 20145083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 22187845 - 22187756
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa-tacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| |||||| |||||| ||| ||||||| |||| |||| ||| ||| ||| |||||||| |||||||||||||||||||    
T  22187845 gaggggattcgaagaatccttaccgctgcttgcttttctgcaactaaaaatacgtaaactttctctgttgcaaacatataaaaattgcaa 22187756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 22410325 - 22410409
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||| |||||| ||| |  ||||| |||||| |||||||||||||||||||  |||| |||||| |||||||||    
T  22410325 taaaaataagtaacgtgaattgtttgaatgaaacgacaatccctgtggatacgatactctacttatcattttattacttggtaaa 22410409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 338
Target Start/End: Complemental strand, 23143821 - 23143713
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgc 329  Q
    ||||||||||||  |||||| |||||| ||||| |||||| |||||||| ||||||||||  |||||||||||  |||||||| | || | |||| ||||    
T  23143821 aaaataagtaacatgaattgtttggacgaaacgacaatccctgtggatatgatactctacttatcactttattaattggtaaatgatttggtacacttgc 23143722  T
Q  330 ctaatccgc 338  Q
    |||||||||    
T  23143721 ctaatccgc 23143713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 11136124 - 11136034
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttctt-caaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| ||||||||||||||||||||||| || ||||||||| |||  |||| | ||||||||| ||||| |||||||||||||    
T  11136124 gaggggattcgaagaatcctaaccgcttcttactttttttgcaaccaaaa-acaggtaagttcgctctgttgcaaacagataaaaattgcaa 11136034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 17729244 - 17729169
Alignment:
Q  240 gtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||| | |||||| ||||| |||||  |||||||||||||||||||  ||||||||||| |||||||||    
T  17729244 gtaacgcgaatcgtttggacgaaacgacaatctttgtggatacgatactctacttatcactttattacttggtaaa 17729169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 313
Target Start/End: Complemental strand, 21907536 - 21907449
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| ||| |||||||||||| ||  |||||| ||||| |||||| ||||||||||||||| |||  ||||||||||| |||||||||    
T  21907536 aacttaaattaagtaacgcgacttttttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaa 21907449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 23645766 - 23645849
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||| |||||  ||||| |||||| ||||| |||||| | |||||||||||||||||  ||||||||||| |||||||||    
T  23645766 aaaaataattaacgataattgtttggacgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaa 23645849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 27124372 - 27124452
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattg 116  Q
    ||||| || |||| |||||||| ||||||||||| ||||||| | |  ||| |||||||||||| ||||||||||||||||    
T  27124372 gattcaaagaatcttaaccgctgcttacttttctgcaaccaagacaggtaaacttgctctgttgcaaacatataaaaattg 27124452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 5624865 - 5624819
Alignment:
Q  33 ggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  5624865 ggagattcgaagaatcctaaccgctgcttacttttctgcaaccaaaa 5624819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 17299832 - 17299913
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| ||||| |||||| ||||| ||||||   || ||||||||||||||  ||||||||||| |||||||||    
T  17299832 aaataagtaacgcaaattgtttggactaaacgacaatcccgatgaatacgatactctacttatcactttattacttggtaaa 17299913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 22566163 - 22566244
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||||| || ||| || || |||| | |||||||| ||||||||||  ||||||||||| |||||||||    
T  22566163 aaataagtaacgcgaattgcttagacgaagcgacaattcttgtggatatgatactctacttatcactttattacttggtaaa 22566244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 24475280 - 24475194
Alignment:
Q  33 ggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||||||||| |||||||||| || ||||||||||| ||||||||| |  ||| |||| | ||||| ||||| ||||| |||||||    
T  24475280 ggagattcgaagaatcctaaccactacttacttttctgcaaccaaaacaggtaaacttgttttgttgcaaacagataaagattgcaa 24475194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 233 - 303
Target Start/End: Complemental strand, 9838455 - 9838383
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttatt 303  Q
    |||||||||||||||| ||| ||  |||||| | |||||||||||||||| |||||||||  |||||||||||    
T  9838455 aaaataagtaacgcgagttgtttcaacaaaatgacaatccatgtggatacaatactctacttatcactttatt 9838383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 22567949 - 22567884
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatact 288  Q
    ||||||||| ||||||||||||| || ||| |||||| ||||  |||||||||||||||| |||||    
T  22567949 tcgttaacttaaaataagtaacgtgagttgtttggacgaaaccacaatccatgtggatacaatact 22567884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 22813607 - 22813680
Alignment:
Q  45 aatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgca 118  Q
    |||| |||||||| ||||||||||| ||||||||| |  ||| |||||| ||||| ||||| ||||||||||||    
T  22813607 aatcataaccgctacttacttttctgcaaccaaaacaggtaaacttgctttgttgcaaacaaataaaaattgca 22813680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 22566034 - 22566082
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| |||||    
T  22566034 gaggagattcaaaaaatcctaaccgctgcttacttttctacaatcaaaa 22566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 23231982 - 23232065
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||||||| |||||| || || |||| | | |||||| ||||| ||||  ||||||||||| |||||||||    
T  23231982 aaaaataagtaacgcgaattgtttggacgaaccgacaattcttatggatatgataccctacttatcactttattacttggtaaa 23232065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 23844464 - 23844547
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||| ||| |||||| ||||| |||||| | | |||| ||||||||||  |||| |||||| |||||||||    
T  23844464 aaaaataagtaacgcgagttgtttggacgaaacgacaatccctttagatatgatactctacttatcattttattacttggtaaa 23844547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 24657341 - 24657425
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaatt 115  Q
    |||| |||||||| ||| ||||||||| ||||||||||| ||||||||| |  |||  | ||||||||| ||||| |||||||||    
T  24657341 gaggggattcgaagaattctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaatt 24657425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 23645657 - 23645738
Alignment:
Q  48 cctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccct 131  Q
    ||||||| || ||||||||| | ||||||||| |  ||| |||||||||||| ||||| ||||||||||| |||||||||||||    
T  23645657 cctaaccactgcttacttttatgcaaccaaaacatgtaa-cttgctctgttgcaaacaaataaaaattgc-aatctctaaccct 23645738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 1635186 - 1635140
Alignment:
Q  33 ggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    ||||||||||| |||||||||||||  |||||||||| |||||||||    
T  1635186 ggagattcgaagaatcctaaccgctgtttacttttctacaaccaaaa 1635140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 7542962 - 7543067
Alignment:
Q  235 aataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgcct 331  Q
    |||||||||||||||||| |||||  ||||  || ||||  | ||||||||||| |||  ||||||||||| |||||||||   || |||||||||||||    
T  7542962 aataagtaacgcgaattgtttggatgaaactacagtccacattgatacgatactttacttatcactttattacttggtaaacaatttgatacatttgcct 7543061  T
Q  332 aatccg 337  Q
    ||||||    
T  7543062 aatccg 7543067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 15466468 - 15466362
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa-ggttcgatacatttgcc 330  Q
    ||||||| |||||||||||| || ||| ||| | |||||| | | ||||||||||||||| | ||||||||| ||||||||| | || | |||| |||||    
T  15466468 aaaataactaacgcgaattgtttagacgaaatgacaatccctattgatacgatactctacgtacactttattacttggtaaacgatttggtacacttgcc 15466369  T
Q  331 taatccg 337  Q
    |||||||    
T  15466368 taatccg 15466362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 28933655 - 28933732
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttatt 303  Q
    |||| |||||||| ||| | ||||| |||||| |||||  ||||| |||||||||||||||||||  |||||||||||    
T  28933655 aacttaaaataagcaacacaaattgtttggacgaaacgataatccttgtggatacgatactctacttatcactttatt 28933732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 12183208 - 12183299
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacc 129  Q
    |||||||| ||||||||||| | |||||||||||  |||||||| |  ||| |||||| ||||| ||||| ||||| ||||| |||||||||||    
T  12183208 gattcgaagaatcctaaccgttgcttacttttctgtaaccaaaacaggtaa-cttgctatgttgcaaacagataaacattgc-aatctctaacc 12183299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 17382275 - 17382214
Alignment:
Q  51 aaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaa 112  Q
    ||||||| ||||||||||| ||||||||| |  ||| |||||||||||| ||||| ||||||    
T  17382275 aaccgctgcttacttttctgcaaccaaaacatgtaaacttgctctgttgcaaacagataaaa 17382214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 8241374 - 8241269
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgc 329  Q
    ||||||||||| | |||||| ||||||||||| |||| || |||||||||||||||||||  |||||||| || ||| ||||| | || | |||| ||||    
T  8241374 aaaataagtaatgtgaattgtttggacaaaac-gcaa-ccttgtggatacgatactctacttatcactttcttacttcgtaaacgatttggtacacttgc 8241277  T
Q  330 ctaatccg 337  Q
    ||||||||    
T  8241276 ctaatccg 8241269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 11177049 - 11176942
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgc 329  Q
    |||||||||||| ||||||  || ||  ||||| ||| ||||||||||||||||||||||  ||||||||| | || |||||| | || | |||| ||||    
T  11177049 aaaataagtaacacgaattatttcgaagaaacgacaacccatgtggatacgatactctacttatcactttagtactcggtaaacgattgggtacacttgc 11176950  T
Q  330 ctaatccg 337  Q
    ||||||||    
T  11176949 ctaatccg 11176942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 14079336 - 14079432
Alignment:
Q  37 attcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa-tacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    ||||||| ||| ||||||||| |||||||||||  |||||||| ||   || ||| || ||||| ||||| ||||||||||||| |||||| |||||    
T  14079336 attcgaagaattctaaccgctgcttacttttctgtaaccaaaaataggaaaacttcctttgttgcaaacagataaaaattgcaactctctagccctt 14079432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 17382217 - 17382162
Alignment:
Q  260 aaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa 313  Q
    |||||| |||||| ||| ||||||||||||||  ||||||||||||| ||||||||    
T  17382217 aaaacgacaatccctgtagatacgatactctactcatcactttattcattggtaaa 17382162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 27124491 - 27124574
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa 313  Q
    |||||||||||||| |||||| |||  | ||||| |||||||||| ||||||||| | ||   ||||||||||| |||||||||    
T  27124491 aaaaataagtaacgagaattgtttgctcgaaacgacaatccatgtcgatacgataatataattatcactttattacttggtaaa 27124574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 28933589 - 28933632
Alignment:
Q  88 cttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||    
T  28933589 cttgctctgttgcaaacagataaaaattgc-aatctctaaccctt 28933632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 5e-20; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 21302018 - 21301909
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttg 328  Q
    ||||||||||||| ||||||| |||||| ||| | ||||||||||||||||||||||||||  ||||||||||| ||||||||| | || | |||| |||    
T  21302018 aaaaataagtaactcgaattgtttggacgaaatgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 21301919  T
Q  329 cctaatccgc 338  Q
    ||||||||||    
T  21301918 cctaatccgc 21301909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 8770234 - 8770146
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| ||||||||| ||| ||||||||||| ||||||||| |  ||| |||||||||||| |||||||||||||||||||    
T  8770234 gaggggattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa 8770146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 20429908 - 20429836
Alignment:
Q  60 ttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||||| ||||||||||| |||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  20429908 ttacttttctgcaaccaaaatagataaacttgctctgttgcaaacatataaaaattgcaaacttctaaccctt 20429836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 21303232 - 21303327
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacccttt 133  Q
    ||||| || ||||||||||||| ||||||||||| ||||||||| |  ||| |||||||||||| ||||| ||||||||||| |||||||||||||||    
T  21303232 gattcaaataatcctaaccgctgcttacttttctgcaaccaaaacaagtaa-cttgctctgttgcaaacagataaaaattgc-aatctctaacccttt 21303327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 12805890 - 12805997
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgc 329  Q
    |||||||||||||| ||||| |||||  ||||| ||||||||||||||| ||||||||||  ||||||||||| ||||||||| | || | |||| ||||    
T  12805890 aaaataagtaacgcaaattgtttggatgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaatgatttggtacacttgc 12805989  T
Q  330 ctaatccg 337  Q
    ||||||||    
T  12805990 ctaatccg 12805997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 8765327 - 8765244
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| |||| |||| ||| ||||||||||| ||||||||| |  ||| |||||||||||| |||||||||||||||||||    
T  8765327 gattcgaagaatcttaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa 8765244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 19925621 - 19925684
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat 294  Q
    |||||||||||||||||||||  |||||| ||| | ||||||||||||||||||||||||||||    
T  19925621 taaaaataagtaacgcgaattatttggacgaaaagacaatccatgtggatacgatactctacat 19925684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 2167495 - 2167587
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacc 129  Q
    |||||||| |||||||||| |||||||||||||  ||||||||| |  ||| |||| | ||||| ||||| |||||||||||||||||||||||    
T  2167495 gattcgaagaatcctaaccacttcttacttttccacaaccaaaacaggtaa-cttggtatgttgcaaacagataaaaattgcaaatctctaacc 2167587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 17438303 - 17438391
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| ||||||||||| | ||||||||||| ||||||||| |  |||  ||||||||||| ||||| |||||||||||||    
T  17438303 gaggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaaattgctctgttgcaaacagataaaaattgcaa 17438391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 17438430 - 17438490
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||||||||||||| |||||| |||||| ||||| ||||||||||||||| ||||||||||    
T  17438430 aaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatatgatactctac 17438490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 932963 - 932884
Alignment:
Q  37 attcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattg 116  Q
    ||||||| ||| ||||||||| ||||||||||| ||||||||| |  ||| |||||||||||| ||||| ||||||||||    
T  932963 attcgaagaatactaaccgctgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacaaataaaaattg 932884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 2167612 - 2167698
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaa 312  Q
    |||||||||||||||| | |||||| |||||| ||||| || |  ||||||||||||||||||||  ||||||||||| ||||||||    
T  2167612 aactaaaaataagtaatgtgaattgtttggacgaaacgacattttatgtggatacgatactctacttatcactttattacttggtaa 2167698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 4650447 - 4650364
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| ||||||||||| | ||||||||||| ||||||||| |  ||| ||||||| |||| ||||| |||||||||||||    
T  4650447 gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctccgttgcaaacagataaaaattgcaa 4650364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 16245607 - 16245703
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||| | ||| ||||||||| ||||||||||| ||||||||| |||  ||| |||||||||||| ||| | ||||||||||||||||||||||||||    
T  16245607 gattcggagaattctaaccgctgcttacttttctgcaaccaaaa-acaggtaa-cttgctctgttgcaaatagataaaaattgcaaatctctaaccctt 16245703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 16245729 - 16245811
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| |||||| |||||| ||| |  |||||||||||||| ||||||||||  ||||||||||| |||||||||    
T  16245729 aaaataagtaacgagaattgtttggacgaaatgataatccatgtggatatgatactctacttatcactttattacttggtaaa 16245811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 3116409 - 3116500
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| |||| ||||||||||||| |||||| |||||| ||||| |||||| ||||||||| |||||| ||  ||||||||||| |||||||||    
T  3116409 tcgtcaacttaaaataagtaacgtgaattgtttggacgaaacgacaatccctgtggatactatactc-acttatcactttattacttggtaaa 3116500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 4650328 - 4650248
Alignment:
Q  235 aataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa 313  Q
    |||||||||||||||||| |||| | ||| | |||||| ||||||||||||||| ||  |||||||||||| |||||||||    
T  4650328 aataagtaacgcgaattgtttgggcgaaaggacaatccctgtggatacgatactttactcatcactttattacttggtaaa 4650248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 6289967 - 6289895
Alignment:
Q  268 aatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgcctaatccg 337  Q
    |||||||||||||| ||||||||||  ||||||||||| ||||||||| | || |||||||||||||||||||    
T  6289967 aatccatgtggatatgatactctacttatcactttattacttggtaaacgatttgatacatttgcctaatccg 6289895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 21325558 - 21325468
Alignment:
Q  40 cgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||  ||| |||||||||||| ||| | ||||||||||| ||||||||||||||    
T  21325558 cgaagaatcataaccgctacttacttttctgcaaccaaattaggtaa-cttgctctgttgcaaatagataaaaattgc-aatctctaaccctt 21325468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 21825870 - 21825950
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    |||||||||||||||| || |||||| ||||   ||||||||||||||||||||||||| | ||||||||| || ||||||    
T  21825870 aaataagtaacgcgaactgtttggacgaaacaaaaatccatgtggatacgatactctacttacactttattactcggtaaa 21825950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 22349509 - 22349426
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||| | |||||| |||||| ||||| ||||  ||||||||||||||||||||  |||||||||||  ||||||||    
T  22349509 aaaaataagtaatgtgaattgtttggacgaaacgacaatttatgtggatacgatactctacttatcactttattatttggtaaa 22349426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 41508588 - 41508493
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    ||||| || |||| ||||||||  |||||||||| ||||||||| |  ||| |||||| ||||| ||||| ||| ||||||||||||||||||||||    
T  41508588 gattcaaagaatcttaaccgctggttacttttctgcaaccaaaacatgtaa-cttgctttgttgcaaacagatacaaattgcaaatctctaaccctt 41508493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 7478334 - 7478412
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacatcactttattccttggtaaa 313  Q
    |||||||||||||| |||||| |||||| ||||| ||||| |||||||||||||| |   ||||||||||||  ||||||||    
T  7478334 aaaaataagtaacgtgaattgtttggaccaaacgacaatcaatgtggatacgatagt---catcactttattatttggtaaa 7478412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 12411251 - 12411169
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaa 312  Q
    |||||||||||||   ||||| ||| || ||||| |||||| |||||||||||||||||||  ||||||||||| ||||||||    
T  12411251 aaaaataagtaacctaaattgtttgtacgaaacgacaatccttgtggatacgatactctactaatcactttattacttggtaa 12411169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 821515 - 821596
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||  |||||| ||  || |||||  |||||||||||||||||||||||||  ||||||||||| |||||||||    
T  821515 aaataagtaacatgaattgtttacacgaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaaa 821596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 8557130 - 8557211
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| ||||| ||  |  ||||| ||||||||||||||||||||||||||  ||||||||||| || ||||||    
T  8557130 aaataagtaacgcaaattgtttaaatgaaacgacaatccatgtggatacgatactctacttatcactttattactcggtaaa 8557211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 28729038 - 28728961
Alignment:
Q  238 aagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||| ||||   ||||| ||||| ||||||||||||||||||||  ||||||||||| |||| ||||    
T  28729038 aagtaacgcgaattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattacttgataaa 28728961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 12754800 - 12754881
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa-tacataagcttgctctgttgtaaacatataaaaattg 116  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||  |  ||| || ||||||||| ||||| ||||||||||    
T  12754800 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaccaggtaaactagctctgttgcaaacaaataaaaattg 12754881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 19925508 - 19925588
Alignment:
Q  45 aatcctaaccgcttcttacttttcttc-aaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctct 125  Q
    ||||||||||||| ||||||||||| | |||||||| |  ||| |||||||||||| |||||||| |||||||||| |||||    
T  19925508 aatcctaaccgctgcttacttttctgcaaaccaaaacaggtaaacttgctctgttgcaaacatat-aaaattgcaagtctct 19925588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 21325449 - 21325357
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||| |||||||||||| | ||||| |||||| ||||| ||||   ||||||||||||||| |||  |||| |||||| |||||||||    
T  21325449 tcgttaacttaaaataagtaacacaaattgtttggacgaaacgacaatttttgtggatacgatactatacttatcagtttattacttggtaaa 21325357  T

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Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 7495094 - 7495172
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacatcactttattccttggtaaa 313  Q
    ||||||||||||||  ||||| |||||| ||||| | |||||||||||| |||||||   ||||||||||||  ||||||||    
T  7495094 aaaaataagtaacgttaattgtttggacgaaacgacgatccatgtggattcgatact---catcactttattatttggtaaa 7495172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 18736559 - 18736645
Alignment:
Q  45 aatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    ||||||||||||| |||| |||||| ||||||||| |  ||| |||| || |||| ||||| |||||||||  |||||||||||||||    
T  18736559 aatcctaaccgctgcttatttttctgcaaccaaaacaggtaa-cttgttcggttgcaaacaaataaaaattaaaaatctctaaccctt 18736645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 10918016 - 10917935
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||| |||| ||||| || || ||| ||||  ||||||||||||||||||||||||||  |||||||||||  ||||||||    
T  10918016 aaataggtaatgcgaactgtttagacgaaacaacaatccatgtggatacgatactctacttatcactttattatttggtaaa 10917935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 3116349 - 3116386
Alignment:
Q  88 cttgctctgttgtaaacatataaaaattgcaaatctct 125  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  3116349 cttgctctgttgcaaacagataaaaattgcaaatctct 3116386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 20429811 - 20429727
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||||||||  ||||  ||| | |||||| | | |||||||||||||||  |||| |||||| |||||||||    
T  20429811 taaaaataagtaacgcgaattgtgtggatgaaatgacaatccttatagatacgatactctacttatcattttattacttggtaaa 20429727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 27413772 - 27413817
Alignment:
Q  34 gagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    ||||| |||| ||||||||||||| ||||||||||| |||||||||    
T  27413772 gagatacgaagaatcctaaccgctgcttacttttctgcaaccaaaa 27413817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 5508434 - 5508386
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggata 281  Q
    ||||||||||||||||  || |||||| ||||| |||||||||||||||    
T  5508434 aaaataagtaacgcgagatgtttggacgaaacgacaatccatgtggata 5508386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 8170098 - 8170050
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    |||| |||||||| ||||||||||||| | ||||||||| |||||||||    
T  8170098 gaggggattcgaagaatcctaaccgctgcatacttttctgcaaccaaaa 8170050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 10745099 - 10745028
Alignment:
Q  59 cttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccct 131  Q
    ||||| ||||| ||||||||| |  ||| |||||||||||| ||| | ||||||||||||||||||| |||||    
T  10745099 cttacatttctgcaaccaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaaatctcttaccct 10745028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 16229941 - 16230001
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||||||||||||  ||||||   |||||||| | |||||| |||||||||||||||||||    
T  16229941 aaaaataagtaactagaattgtaaggacaaaaggacaatccctgtggatacgatactctac 16230001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 17156001 - 17155931
Alignment:
Q  47 tcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||| |||| ||||||||||| |||||||| ||  ||| |||||||||||| ||||| |||||||||||||    
T  17156001 tcctaatcgctacttacttttctgcaaccaaa-taggtaa-cttgctctgttgcaaacagataaaaattgcaa 17155931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 19171833 - 19171916
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||| || ||||| |||||| ||||| |||||| |||| ||| ||| |||| |  ||||||||||| |||||||||    
T  19171833 aaaaataagtaatgcaaattgtttggacgaaacgacaatccttgtgaatatgatcctctgcttatcactttattacttggtaaa 19171916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 19908529 - 19908449
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaacc-aaaatacataagcttgctctgttgtaaacatataaaaatt 115  Q
    |||||||| ||||||||| ||| ||||||||||| ||||| ||||||  ||| |||||| ||||| ||| | |||||||||    
T  19908529 gattcgaagaatcctaactgctgcttacttttctgcaaccaaaaataggtaaacttgctttgttgcaaaaaaataaaaatt 19908449  T

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Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 16365806 - 16365745
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  16365806 taaaaataagtaacgcgaattgtttgcacaaaacgacaatccatgtggatacgatactctac 16365745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 338
Target Start/End: Complemental strand, 4785945 - 4785828
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaaggttcga 320  Q
    |||| |||||||||||||||||| ||| || |||||| ||||| |||||| |||||||  ||||||||||  ||||||||||| |||||||| | || ||    
T  4785945 tcgtcaactaaaaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggtaacgatttga 4785846  T
Q  321 tacatttgcctaatccgc 338  Q
    |||| |||||||| ||||    
T  4785845 tacacttgcctaaaccgc 4785828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 338
Target Start/End: Complemental strand, 4818945 - 4818828
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaaggttcga 320  Q
    |||| |||||||||||||||||| ||| || |||||| ||||| |||||| |||||||  ||||||||||  ||||||||||| |||||||| | || ||    
T  4818945 tcgtcaactaaaaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggtaacgatttga 4818846  T
Q  321 tacatttgcctaatccgc 338  Q
    |||| |||||||| ||||    
T  4818845 tacacttgcctaaaccgc 4818828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 3734705 - 3734613
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| |||| ||||||||||||| |||||| |||||| ||||  |||| |||||||||||||||||||||  ||||||||||| |||||||||    
T  3734705 tcgtcaacttaaaataagtaacgtgaattgtttggaccaaacaacaattcatgtggatacgatactctacttatcactttattacttggtaaa 3734613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 1848102 - 1848202
Alignment:
Q  33 ggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa-atctctaaccct 131  Q
    ||||||||||| |||| |||||||| ||||||||||| ||||||||| |  ||| |||||||||||  ||||| |||||||||||||  |||||||||||    
T  1848102 ggagattcgaagaatcataaccgctgcttacttttctgcaaccaaaacaggtaaacttgctctgtttcaaacagataaaaattgcaagctctctaaccct 1848201  T
Q  132 t 132  Q
    |    
T  1848202 t 1848202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 3329657 - 3329740
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||||  |||| |||||  ||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  3329657 aaaaataagtaacgcagattgtttggatgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaa 3329740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 9731622 - 9731686
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||| ||||| |||||||||||||    
T  9731622 aactaaaaataagtaacgcgaattgtttggacgaaacgacaatccttgtggttacgatactctac 9731686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 31493029 - 31492922
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgc 329  Q
    |||||||||||  | ||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||| | ||||||| | || |||||| ||||    
T  31493029 aaaataagtaaaacaaattgtttggacaaaacgacaatccatgtggatacgatactctacttatcactttattacctggtaaacgatttgatacacttgc 31492930  T
Q  330 ctaatccg 337  Q
    || |||||    
T  31492929 ctgatccg 31492922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 8979006 - 8979088
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||| |||||||| |||||| ||||  ||||||||||||||| ||||||||||  ||||||||||| |||||||||    
T  8979006 aaaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatatgatactctacttatcactttattacttggtaaa 8979088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 18662539 - 18662433
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgcc 330  Q
    |||||||||||| |||||| |||||| ||||| |||||| |||||||||||||||||||  ||||||||| | ||||||||| | || |||||| ||||     
T  18662539 aaataagtaacgtgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttagtgcttggtaaacgatttgatacacttgct 18662440  T
Q  331 taatccg 337  Q
    |||||||    
T  18662439 taatccg 18662433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 20582477 - 20582390
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatct 123  Q
    |||||||| ||||||||| ||| ||||||||||| ||||||||| |  ||| |||||||||||| ||| | |||||||||||||||||    
T  20582477 gattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagataaaaattgcaaatct 20582390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 3329543 - 3329631
Alignment:
Q  45 aatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    ||||||||||||| ||||||||||| ||||||||| |||  ||| |||||| ||||| ||||| ||||||||||||| ||||||||||||    
T  3329543 aatcctaaccgctgcttacttttctgcaaccaaaa-acaagtaaacttgctatgttgcaaacagataaaaattgcaactctctaaccctt 3329631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 11803180 - 11803107
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttatt 303  Q
    ||||||||||||||||||||| |||||| ||| | |||||| |||||||||||||||||||  |||||||||||    
T  11803180 aaaaataagtaacgcgaattgtttggacgaaaggacaatccctgtggatacgatactctacttatcactttatt 11803107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 7318382 - 7318290
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| |||| ||||||||||| ||||  || || ||| ||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  7318382 tcgtcaacttaaaataagtaatgcgagctgtttagacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaa 7318290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 2563915 - 2563835
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    ||||||||||| | ||||| |||||| ||||| |||||| ||||||||||||||||||| | ||||||||| |||||||||    
T  2563915 aaataagtaacacaaattgtttggacgaaacgacaatccttgtggatacgatactctacttacactttattacttggtaaa 2563835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 13759859 - 13759942
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||||||| || |||||| ||||| |||||| |||||||| ||||||||||  |||||||||||  ||||||||    
T  13759859 aaaaataagtaacgcgaactgtttggacgaaacgacaatccttgtggatatgatactctacttatcactttattaattggtaaa 13759942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 9131132 - 9131038
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca-taagcttgctctgttgtaaacatataaaaattgcaaatctctaaccc 130  Q
    |||||||| ||||||||||||  ||||||||| | ||||||||| ||| | | |||||||| ||| ||||| ||||||||||||||||||||||||    
T  9131132 gattcgaagaatcctaaccgcagcttacttttttgcaaccaaaa-acagttaacttgctctattgcaaacaaataaaaattgcaaatctctaaccc 9131038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 338
Target Start/End: Original strand, 2350742 - 2350855
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgataca 324  Q
    |||||||||||  ||||||| |||  |||||||||||| |||||||||||||||||||| |||||  | || |||||| ||||||||| | || | ||||    
T  2350742 aactaaaaatatttaacgcggattatttggacaaaacgacaatccatgtggatacgataatctacttagcagtttattacttggtaaatgatttggtaca 2350841  T
Q  325 tttgcctaatccgc 338  Q
     |||||||||||||    
T  2350842 cttgcctaatccgc 2350855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 5108787 - 5108693
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaat-acataagcttgctctgttgtaaacatataaaaattgcaaatctctaacc 129  Q
    ||||| || ||||||||||||| ||||||||||| |||||||||| |  ||| |||||||| ||| ||||| |||||||||| || |||||||||    
T  5108787 gattcaaagaatcctaaccgctgcttacttttctgcaaccaaaatcaagtaaacttgctctcttgcaaacagataaaaattgtaactctctaacc 5108693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 8877522 - 8877441
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggt 310  Q
    ||||||||||||  | |||||| || ||||||| ||||||||||||||||||||||||||||  ||||| ||||| ||||||    
T  8877522 taaaaataagtacagagaattgtttcgacaaaagggcaatccatgtggatacgatactctacttatcaccttattacttggt 8877441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 9864327 - 9864408
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| ||||| || ||| ||||| |||||| |||||||| ||||||||||  ||||||||||| |||||||||    
T  9864327 aaataagtaacgcaaattgtttagacgaaacgacaatccttgtggatatgatactctacttatcactttattacttggtaaa 9864408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 337
Target Start/End: Complemental strand, 1584652 - 1584537
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaaggttcga 320  Q
    |||| |||| |||||||||||||||| ||| || ||| ||||  |||||| |||||||||||||||| ||  ||||||||||| ||||||||| | | |     
T  1584652 tcgtcaacttaaaataagtaacgcgatttgtttagacgaaacaacaatccctgtggatacgatactc-acttatcactttattacttggtaaatgattgg 1584554  T
Q  321 tacatttgcctaatccg 337  Q
    |||| ||||||||||||    
T  1584553 tacacttgcctaatccg 1584537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 8313293 - 8313364
Alignment:
Q  59 cttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    ||||||||||| |||||||||||  ||| |||||||||||| ||||| ||||||||||| ||||||||||||||    
T  8313293 cttacttttctgcaaccaaaataggtaa-cttgctctgttgaaaacagataaaaattgc-aatctctaaccctt 8313364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 8877648 - 8877559
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttctt-caaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| ||||| || ||||||||||||| |||||| || || |||||||||||  ||| |||||||||||| ||||| |||||||||||||    
T  8877648 gaggggattcaaagaatcctaaccgctgcttactatttttgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaa 8877559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 17153144 - 17153236
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| |||| ||||||||||||||||  || || ||| ||||| ||||| ||||||||||||||||||||  |||||||| || |||||||||    
T  17153144 tcgtcaacttaaaataagtaacgcgagctgtttagacgaaacgacaatctatgtggatacgatactctacttatcactttcttacttggtaaa 17153236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 18368978 - 18369062
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||  |||||| |||||| ||||| |||||| | ||||||| |||||||||  ||||||||||| |||||||||    
T  18368978 taaaaataagtaactagaattgtttggacgaaacgacaatccctatggatacaatactctacttatcactttattacttggtaaa 18369062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 5108651 - 5108583
Alignment:
Q  246 cgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    ||||||| |||||| ||||| |||||| ||||||||||||||||||| | ||||||||| |||||||||    
T  5108651 cgaattgtttggacgaaacgacaatccttgtggatacgatactctacttacactttattacttggtaaa 5108583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 6005934 - 6005878
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactct 290  Q
    |||||||||||| |||||| |||||| ||||| |||||||||||||||| |||||||    
T  6005934 aaataagtaacgtgaattgtttggaccaaacgacaatccatgtggatacaatactct 6005878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 23099947 - 23100034
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||| ||||||  || |||||| |||||| ||||| ||||| ||||||||||||||||||||  |||||||||||  ||||||||    
T  23099947 aactaaacataagtgtcgggaattgtttggacgaaacgacaatctatgtggatacgatactctacttatcactttattatttggtaaa 23100034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 7492160 - 7492236
Alignment:
Q  56 cttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||||||||| ||||||||| |||  ||| |||||||||||| |||||  |||||||||||||||||||||||||    
T  7492160 cttcttacttttctgcaaccaaaa-acaggtaa-cttgctctgttgcaaacagttaaaaattgcaaatctctaaccctt 7492236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 13418743 - 13418660
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||| || ||||||||||||| |||||||| || ||| ||||| |  ||| |||||||||||| ||||| |||||||||||||    
T  13418743 gattcaaagaatcctaaccgctgcttactttgctgcaatcaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 13418660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 18662661 - 18662579
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| | ||||||||||| ||||| ||||| ||||||||| |  ||| |||||||||||| ||||| |||||||||||||    
T  18662661 gattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaa-cttgctctgttgcaaacaaataaaaattgcaa 18662579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 1848226 - 1848307
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggta 311  Q
    ||||||||||||||| ||||| |||||| ||| | ||||||  |||||||||||||| |||  ||||||||||| |||||||    
T  1848226 aaaaataagtaacgcaaattgtttggacgaaaggacaatcccagtggatacgatactgtacttatcactttattacttggta 1848307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 12329783 - 12329674
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa-ggttcgatacattt 327  Q
    ||||||||||||||||| |||  |||| ||||||| |||||| ||||||||| ||||||||   |||| ||| || ||||||||| | || | |||||||    
T  12329783 taaaaataagtaacgcggattatttgggcaaaacgacaatccttgtggatactatactctatttatcaatttcttacttggtaaacgatttggtacattt 12329684  T
Q  328 gcctaatccg 337  Q
    ||||||||||    
T  12329683 gcctaatccg 12329674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 39273048 - 39273150
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaacc-aaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacc 129  Q
    |||||||||||||  |||||||||||| ||||||||||| ||||| ||||||  ||| |||||||||||| ||| | || ||| |||||| | | |||||    
T  39273048 gaggagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaaatagattaaatttgcaactttataacc 39273147  T
Q  130 ctt 132  Q
    |||    
T  39273148 ctt 39273150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 2564040 - 2563943
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaat-acataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    ||||||||  |||||||||||| ||||||||||| ||| | |||  |  ||| |||||||||||| ||||| ||||||||| ||| ||||||||||||    
T  2564040 gattcgaaggatcctaaccgctacttacttttctgcaaactaaagcaggtaaacttgctctgttgcaaacagataaaaatttcaactctctaaccctt 2563943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 6042564 - 6042500
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||||||||||| ||||| ||| || ||||| ||| |  |||||||||||||||||||    
T  6042564 aactaaaaataagtaacgcaaattgtttgaacgaaacgacaacctctgtggatacgatactctac 6042500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 8054488 - 8054571
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||  |||||| |||||| ||||| |||| | |||| ||||||||||||||  |||||||||||  ||||||||    
T  8054488 aaaaataagtaacaagaattgtttggacgaaacgacaattcctgtgaatacgatactctacttatcactttattatttggtaaa 8054571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 10587019 - 10587106
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| ||||||||||||  || ||| || ||| ||||| |||||| ||| |||||||||||||||  ||||||||||| |||||||||    
T  10587019 aacttaaaataagtaacatgagttgtttagacgaaacgacaatccctgtagatacgatactctacttatcactttattacttggtaaa 10587106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 10937673 - 10937598
Alignment:
Q  261 aaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgcctaa 333  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||| ||||||||| | || |||||| ||||||||    
T  10937673 aaacgacaatccatgtggatacgatactatacttatcactttattacttggtaaacgatttgatacacttgcctaa 10937598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 11803295 - 11803211
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaatt 115  Q
    |||| |||||||| |||||||||||||  |||||| ||| ||||||||| |  ||| |||||||||||| |||||  ||||||||    
T  11803295 gaggggattcgaataatcctaaccgctggttacttctctgcaaccaaaacaggtaaacttgctctgttgcaaacaactaaaaatt 11803211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 16059020 - 16059080
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||||||||||||   ||||| |||||| ||| | ||||||||||||||||||||||||||    
T  16059020 aaaaataagtaactaaaattgtttggacgaaaggacaatccatgtggatacgatactctac 16059080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 132
Target Start/End: Original strand, 16297724 - 16297806
Alignment:
Q  49 ctaaccgcttcttacttttcttcaaccaaaa-tacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    ||||||||| ||||||||||| ||||||||| ||  ||| ||| |||||||| ||||||||||||||||| ||| ||||||||||    
T  16297724 ctaaccgctgcttacttttctgcaaccaaaaataggtaa-cttactctgttgcaaacatataaaaattgc-aatttctaaccctt 16297806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 17203123 - 17203063
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||||||||||||||| |||| |||||| ||||| ||||||  ||| ||||||||||||||    
T  17203123 aaaaataagtaacgcggattgtttggacgaaacgacaatccccgtgaatacgatactctac 17203063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 39273174 - 39273257
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| | ||||  |||||| ||||| |||||||| || ||||||||||||||  ||||||||||| ||| |||||    
T  39273174 aaaaataagtaacacaaattatttggacgaaacgacaatccatatgaatacgatactctacttatcactttattacttagtaaa 39273257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 4786062 - 4786019
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||    
T  4786062 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaa 4786019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 7397268 - 7397213
Alignment:
Q  259 caaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    ||||||| |||||||||||||||||||||||||  | ||||||||| |||||||||    
T  7397268 caaaacgacaatccatgtggatacgatactctagttacactttattacttggtaaa 7397213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 7397362 - 7397280
Alignment:
Q  37 attcgaaaaatcctaaccgcttcttacttttcttcaaccaaaat-acataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||  | |||| |||| | ||||| ||||| |||||||||||||    
T  7397362 attcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacagataa-cttgttttgttgcaaacagataaaaattgcaa 7397280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 16297820 - 16297902
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||| | |||||| |||||| ||| | ||||||||||| |||||||| |||||  ||||| ||||| |||||||||    
T  16297820 aaaataagtaatgtgaattgtttggacgaaatgacaatccatgtgaatacgataatctacttatcacattattacttggtaaa 16297902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 133
Target Start/End: Original strand, 2350682 - 2350720
Alignment:
Q  95 tgttgtaaacatataaaaattgcaaatctctaacccttt 133  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  2350682 tgttgtaaacagataaaaattgaaaatctctaacccttt 2350720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 4579195 - 4579137
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||| ||||||| |||||||||| | |||||  | |||||||||||||||||    
T  4579195 aaataagtaacacgaattgtttggacaaaaagacaatctctttggatacgatactctac 4579137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 8054060 - 8054140
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa 313  Q
    |||||||||||| | |||||| |||||   |||| |||| ||||||||||||||||||||   ||||||||||| |||||||||    
T  8054060 aaaaataagtaatgagaattgtttgga---aacgacaattcatgtggatacgatactctaattatcactttattacttggtaaa 8054140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 9500542 - 9500461
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa 313  Q
    |||||||||| |||||||| || ||| ||||  |||||| ||||||||||||||||||   ||||| ||||| |||||||||    
T  9500542 aaataagtaatgcgaattgtttagacgaaacaacaatccttgtggatacgatactctaatgatcacattattacttggtaaa 9500461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 12181718 - 12181648
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttgg-acaaaacggcaatccatgtggatacgatactctac 292  Q
    |||| |||| |||||||||||| ||||||| |||| || ||||| |||| |||||||||||| ||||||||    
T  12181718 tcgtcaacttaaaataagtaactcgaattgtttgggacgaaacgacaattcatgtggatacggtactctac 12181648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 16365930 - 16365884
Alignment:
Q  33 ggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    ||||||||||| ||||||||||||| ||||||||| | |||||||||    
T  16365930 ggagattcgaagaatcctaaccgctgcttacttttttgcaaccaaaa 16365884  T

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Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 4986664 - 4986572
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa 313  Q
    |||| |||| ||||||||||||||||  |  || ||| ||||| |||||||||||| ||| ||||||||  || ||||||||| |||||||||    
T  4986664 tcgtcaacttaaaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctactcagcactttattacttggtaaa 4986572  T

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Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 4990762 - 4990670
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa 313  Q
    |||| |||| ||||||||||||||||  |  || ||| ||||| |||||||||||| ||| ||||||||  || ||||||||| |||||||||    
T  4990762 tcgtcaacttaaaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctactcagcactttattacttggtaaa 4990670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 7492261 - 7492322
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||||| || ||||| ||| || ||||  |||||| |||||||||||||||||||    
T  7492261 taaaaataagtaatgcaaattgtttgaacgaaacaacaatccttgtggatacgatactctac 7492322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 9574516 - 9574424
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| |||| ||||||| |||||||| | | || ||| ||||  |||||  ||| |||||||||||||||  |||||||||||||||||||||    
T  9574516 tcgtcaacttaaaataaataacgcgagtcgtttagacgaaacaacaatctctgtagatacgatactctacttatcactttattccttggtaaa 9574424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 336
Target Start/End: Complemental strand, 15869704 - 15869588
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcg 319  Q
    |||| |||| ||||||||||||||  | |  || ||||||||   ||||| || ||||||||||||||||  ||||||||||| ||||||||| | || |    
T  15869704 tcgtcaacttaaaataagtaacgcagactatttagacaaaacaaaaatccttgcggatacgatactctacttatcactttattacttggtaaacgatttg 15869605  T
Q  320 atacatttgcctaatcc 336  Q
    ||||| |||||||||||    
T  15869604 atacacttgcctaatcc 15869588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 6042672 - 6042589
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca-taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||| || ||||||||||||| |||| |||||| ||||||||| |   ||| ||| |||||||| |||||||||||||||||||    
T  6042672 gattcaaagaatcctaaccgctgcttatttttctgcaaccaaaaaaaggtaaactt-ctctgttgcaaacatataaaaattgcaa 6042589  T

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Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 7318443 - 7318400
Alignment:
Q  88 cttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||    
T  7318443 cttgctctgttgcaaacagataaaaattgc-aatctctaaccctt 7318400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 9245279 - 9245223
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactct 290  Q
    ||||||||||| ||||||| ||  || ||| | ||||||||||||||||||||||||    
T  9245279 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactct 9245223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 11221163 - 11221223
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||||||| ||||| ||  || ||||| |||||| ||||||||| |||||||||    
T  11221163 aaaaataagtaacgcaaattgtttacacgaaacgacaatccctgtggatacaatactctac 11221223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 13908954 - 13908871
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| ||||||| |||||| ||||| |||||| |||||||||||||||||||  ||||||||||| |||||||||    
T  13908954 aaaaataagtaacacgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaa 13908871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 337
Target Start/End: Complemental strand, 17672111 - 17671994
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcg 319  Q
    ||||||||| |||||||||||||||| ||| || ||| ||||  |||||||||||||||| |||||||||  ||||||||||| ||||||||| | || |    
T  17672111 tcgttaacttaaaataagtaacgcgagttgtttagacgaaacaacaatccatgtggatacaatactctacttatcactttattacttggtaaacgatttg 17672012  T
Q  320 atacatttgcctaatccg 337  Q
     |||| ||||||||||||    
T  17672011 gtacacttgcctaatccg 17671994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 19882738 - 19882657
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||||| |||||| ||||| |||||||||| |||||||||||||||  ||||||||||| |||| ||||    
T  19882738 aaataagtaacgcgaattgtttggacgaaacgacaatccatgttgatacgatactctactaatcactttattacttgataaa 19882657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 12578256 - 12578348
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa 313  Q
    |||| |||| |||||||| ||||| ||||| |||||||||||| |||||||||||||||||||||||||   |||||||||||  ||||||||    
T  12578256 tcgtcaacttaaaataagaaacgcaaattgtttggacaaaacgacaatccatgtggatacgatactctaattatcactttattatttggtaaa 12578348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 13692668 - 13692751
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| ||||||| |||| | ||||| ||||||||||||||| ||||||||||  ||||||||||| |||||||||    
T  13692668 aaaaataagtaacacgaattgtttggtcgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaa 13692751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 13992879 - 13992958
Alignment:
Q  236 ataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||| ||||||| ||||||||||||  |||||||||||||||||||||||||  | ||||||||| |||||||||    
T  13992879 ataagtaacacgaattgtttggacaaaacgaaaatccatgtggatacgatactctacttaccactttattacttggtaaa 13992958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 313
Target Start/End: Complemental strand, 17216913 - 17216834
Alignment:
Q  236 ataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||| |||||| |||||| ||||| ||||||||||||||| ||||||||||  ||||||||||| |||||||||    
T  17216913 ataagtaacgagaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcactttattgcttggtaaa 17216834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 21323874 - 21323934
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||||||||    
T  21323874 aaaaataagtaacgcgaattgtttggacgaaacgacaatctatgtggatacgatactctac 21323934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 17217031 - 17216944
Alignment:
Q  46 atcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacccttt 133  Q
    |||||||||| | ||||||||||| ||||||||| |  ||| |||||||||||| ||||| ||||||||||||| | |||||||||||    
T  17217031 atcctaaccgttgcttacttttctacaaccaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaactttctaacccttt 17216944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 5679314 - 5679222
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||| |||||||||||||||||||| |||||| ||||   | | ||||| |||||||||||||||  ||||||||||| |||||||||    
T  5679314 tcgttaacttaaaataagtaacgcgaattgtttggacgaaacaaaagttcatgtagatacgatactctactaatcactttattacttggtaaa 5679222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 15164964 - 15164891
Alignment:
Q  59 cttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    ||||||||||| ||||||||| |  ||| |||||||||||| ||||| ||||||||||||| ||||||||||||    
T  15164964 cttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacaaataaaaattgcaactctctaaccctt 15164891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 17337012 - 17337110
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaaatctctaacccttt 133  Q
    |||||||| |||| ||| | || ||||||||| | ||||||||| |||  ||| |||||||||||||||||| |||||||||||||||||| ||||||||    
T  17337012 gattcgaagaatcataatctctgcttacttttatgcaaccaaaa-acaggtaaacttgctctgttgtaaacagataaaaattgcaaatctcaaacccttt 17337110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 19492699 - 19492782
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||||||| |||||  ||||| |||| | |||||||||||||||||||  ||| ||||||| |||||||||    
T  19492699 aaaaataagtaacgcgaattgtttggatgaaacgacaattcttgtggatacgatactctacttatccctttattacttggtaaa 19492782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 25121227 - 25121307
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    ||||||||||||||||||| |||||| ||||  |||||| ||||||||||||||| ||| | ||||||||| |||||||||    
T  25121227 aaataagtaacgcgaattgtttggacgaaaccacaatccttgtggatacgatactatacttacactttattacttggtaaa 25121307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 11490631 - 11490549
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||||||||| |||||  ||||  |||||| |||||||||||||||||||  ||||||||||| |||| ||||    
T  11490631 aaaataagtaacgcgaattgtttggaagaaactacaatccctgtggatacgatactctacttatcactttattacttgataaa 11490549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 17709975 - 17709896
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaatt 115  Q
    |||||||| ||||||||| ||| ||||||||| | ||||||||| |  ||| |||||||||||| |||||||||||||||    
T  17709975 gattcgaagaatcctaacagctacttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaatt 17709896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 24639469 - 24639535
Alignment:
Q  248 aattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaa 312  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||  ||||||||||| ||||||||    
T  24639469 aattgtttggacaaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaa 24639535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 13128873 - 13128956
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||||| ||| |||||| ||||| |||||| | ||||||| |||||||||  |||| |||||| |||||||||    
T  13128873 aaaaataagtaacgcgagttgtttggacgaaacgacaatccctatggatacaatactctacttatcattttattacttggtaaa 13128956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 17672214 - 17672132
Alignment:
Q  45 aatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacc 129  Q
    ||||||||| ||||||||||||||| ||||||||  |  ||| |||||||||||| ||||| ||||||||||| |||||||||||    
T  17672214 aatcctaactgcttcttacttttctgcaaccaaaccaggtaa-cttgctctgttgcaaacagataaaaattgc-aatctctaacc 17672132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 7582396 - 7582314
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||| ||  |||| |||||| ||||  ||||||||||||||| ||||||||||  ||||||||||| |||||||||    
T  7582396 aaaataagtaatgcagattgtttggacgaaacaacaatccatgtggatatgatactctacttatcactttattacttggtaaa 7582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 13909076 - 13908992
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||| || ||||||||||||| ||||||||| | ||||||||| |||  ||| |||||||||||| ||||| |||||||||||||    
T  13909076 gattcaaagaatcctaaccgctgcttacttttttgcaaccaaaa-acaggtaaacttgctctgttgcaaacagataaaaattgcaa 13908992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 15164867 - 15164809
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactct 290  Q
    ||||||||||||||| ||||| |||||| ||| | |||||| |||||||||||||||||    
T  15164867 aaaaataagtaacgcaaattgtttggacgaaatgacaatccctgtggatacgatactct 15164809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 20315098 - 20315017
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| ||||| |||||| ||||| |||||| |||||||| |||| |||||  |||| |||||| |||||||||    
T  20315098 aaataagtaacgcaaattgtttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattacttggtaaa 20315017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 24639338 - 24639435
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaacc-aaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacccttt 133  Q
    ||||| || |||||||||| || ||||||||||| ||||| |||| |  ||| |||||||||||| ||||| || |||||| |||||||||||||||||    
T  24639338 gattcaaagaatcctaaccactgcttacttttctgcaaccgaaaacaggtaaacttgctctgttgcaaacaaat-aaaattacaaatctctaacccttt 24639435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 17337125 - 17337194
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||| ||||||||||||||||||| ||||| |||||| ||| | |||||  | |||||||||||||||||    
T  17337125 tcgtcaactaaaaataagtaacgcaaattgtttggacgaaatgacaatctctttggatacgatactctac 17337194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 11933517 - 11933461
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactc 289  Q
    |||||||||||||||| ||| |||||| ||||| ||||||||||||  |||||||||    
T  11933517 aaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggtcacgatactc 11933461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 16730398 - 16730458
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||||||||| ||| |||||| |||||  ||||| | |||||||||||||||||    
T  16730398 aaaaataagtaacgcgagttgtttggacgaaacgaaaatccttttggatacgatactctac 16730458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 19562047 - 19562136
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| ||| |||||||||  |||||||||| ||||||||| |||  ||| |||||||||||| ||| | |||||||||||||    
T  19562047 gaggggattcgaagaattctaaccgctgattacttttctgcaaccaaaa-acaggtaaacttgctctgttgcaaagagataaaaattgcaa 19562136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 19492589 - 19492673
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| ||||||||||||  ||||||||||| ||||||||| |||  ||| |||||| ||||| ||||| ||||| |||||||    
T  19492589 gattcgaagaatcctaaccgccgcttacttttctgcaaccaaaa-acatgtaaacttgctgtgttgcaaacaaataaatattgcaa 19492673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 19092404 - 19092312
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| |||| |||||||| |||| || ||| |||||| ||||| ||||||||||| || ||||||||| |  ||||||||||| |||| ||||    
T  19092404 tcgtcaacttaaaataagcaacgtgagttgtttggacgaaacgacaatccatgtgaatgcgatactcttcttatcactttattacttgataaa 19092312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 25097936 - 25097875
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||||||||||  |||||  | ||||||||   ||||||||||||||||||||||||||    
T  25097936 taaaaataagtaacatgaatttttcggacaaaagaacaatccatgtggatacgatactctac 25097875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 26115783 - 26115871
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctct 125  Q
    |||| ||| ||||||||||||| || || ||| | ||||||||| |  ||| ||| |||||||| ||||| |||||||||||||||||||    
T  26115783 gatttgaagaatcctaaccgctgctaacatttatgcaaccaaaacaggtaa-cttactctgttgcaaacagataaaaattgcaaatctct 26115871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 14649064 - 14649021
Alignment:
Q  88 cttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||    
T  14649064 cttgctctgttgcaaacagataaaaattg-aaatctctaaccctt 14649021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 16730330 - 16730374
Alignment:
Q  88 cttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||||||| ||||| ||||||||||||| | ||||||||||    
T  16730330 cttgctctgttgcaaacagataaaaattgcaactttctaaccctt 16730374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 22345090 - 22345058
Alignment:
Q  262 aacggcaatccatgtggatacgatactctacat 294  Q
    |||| ||||||||||||||||||||||||||||    
T  22345090 aacgacaatccatgtggatacgatactctacat 22345058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 29382360 - 29382443
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||| ||||| |||||  ||||| |||||| |||||||||||||||||||  ||||||||||| |||||||||    
T  29382360 aaaaataagtaacgcaaattgtttggatgaaacgacaatccctgtggatacgatactctacttatcactttattacttggtaaa 29382443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 13314992 - 13315074
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||||||||| |||||| ||||   ||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  13314992 aaaataagtaacgcgaattgtttggacgaaacaaaaatccatgtggatacgatactatacttatcactttattacttggtaaa 13315074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 14528248 - 14528166
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| || ||| |||||| ||||| ||||| ||||||||||||||||||||  ||||||||||| |||||||||    
T  14528248 aaaataagtaacgtgagttgtttggacgaaacgacaatctatgtggatacgatactctacgtatcactttattacttggtaaa 14528166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 30122156 - 30122232
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttgg 309  Q
    |||||||||| |||||||| |||||||||| | ||||||||||||||| |||||||||| | ||||||||| |||||    
T  30122156 aaataagtaatgcgaattgtttggacaaaatgacaatccatgtggatatgatactctacttacactttattacttgg 30122232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 2637697 - 2637615
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| || ||| || ||| ||||| ||||||||||||||||||||||||||  ||||||||||| |||| ||||    
T  2637697 aaaataagtaacgggagttgtttagacgaaacgacaatccatgtggatacgatactctacttatcactttattacttgataaa 2637615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 24269697 - 24269615
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    |||||||| ||| | |||||| |||||| ||||| |||||| ||||||||||||||||||| | ||||||||| |||||||||    
T  24269697 aaaaataaataatgtgaattgtttggacgaaacgacaatccctgtggatacgatactctacttacactttattacttggtaaa 24269615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 16404127 - 16404039
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| ||||||||||||| |||| |||||| || ||||||||  |||  | ||||||||| ||||| |||||||||||||    
T  16404127 gaggggattcgaagaatcctaaccgctgcttatttttctgcagccaaaataggtaaattcgctctgttgcaaacaaataaaaattgcaa 16404039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 24110547 - 24110623
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaa 112  Q
    |||||||| |||||||||| || ||||||||||| ||||||||| | |||| ||| |||||||| ||||| ||||||    
T  24110547 gattcgaataatcctaacccctgcttacttttctgcaaccaaaacagataaacttcctctgttgcaaacagataaaa 24110623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 24114281 - 24114364
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||||| | ||| |||||| ||||| |||||| || ||||||||||||||||  |||| |||||| |||||||||    
T  24114281 aaaaataagtaacgcaagttgtttggacgaaacgacaatccctgcggatacgatactctacttatcattttattacttggtaaa 24114364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 24644935 - 24644855
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    |||||||||| |||||||  ||||| ||||||  ||||||||||||||| ||||||||| | ||||||||| |||||||||    
T  24644935 aaataagtaatgcgaattatttggaaaaaacgataatccatgtggatacaatactctacttacactttattacttggtaaa 24644855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 5851039 - 5850958
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||| || |||| ||||   ||||| ||||| ||||||||||||||||||||  ||||||||||| |||||||||    
T  5851039 aaataagtaacacggattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattacttggtaaa 5850958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 16404012 - 16403950
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat 294  Q
    |||||||||||||  |||||| | |||| ||| | ||||||||||||||||||||||||||||    
T  16404012 aaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacat 16403950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 17509347 - 17509266
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggt 310  Q
    ||||||||||||| | |||||| |||||| |||   ||||||||||||||| ||||||||||  ||||||||||| ||||||    
T  17509347 taaaaataagtaaagagaattgtttggacgaaagaacaatccatgtggatatgatactctacttatcactttattacttggt 17509266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 15238896 - 15238839
Alignment:
Q  235 aataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||||||||||||||||| || ||| ||||| |||| ||||||||||||||| |||||    
T  15238896 aataagtaacgcgaattgtttagacgaaacgacaattcatgtggatacgataatctac 15238839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 18569278 - 18569193
Alignment:
Q  34 gagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||||| ||||||| |||||||| ||||||||||| ||||||||| |  ||| || ||| ||||| ||||| |||||||| ||||    
T  18569278 gagattcaaaaaatcgtaaccgctgcttacttttctgcaaccaaaacaagtaaactcgctatgttgcaaacagataaaaatagcaa 18569193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 19264258 - 19264173
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaacc-aaaatacataagcttgctctgttgtaaacatataaaaatt 115  Q
    |||| ||||||||||| ||| |||||| ||||| ||| ||||||| |||||| |||| |||||||||||| ||| | |||||||||    
T  19264258 gaggggattcgaaaaagccttaccgctgcttaccttttttcaaccaaaaatagataaacttgctctgttgcaaaaagataaaaatt 19264173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 21314728 - 21314641
Alignment:
Q  227 taactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaa 312  Q
    ||||||||||||||||||| | |||| ||| || |||||  ||||| ||| |||||||||| ||||  ||||||||||| ||||||||    
T  21314728 taactaaaaataagtaacgagtattgtttgcacgaaacgaaaatccctgtagatacgatacactacttatcactttattacttggtaa 21314641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 13314869 - 13314962
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaaatctctaac 128  Q
    |||||||| |||| |||||| | ||||||||||| ||||||||| |||  |||  ||| || |||| ||||||||||||||||||| ||||||||    
T  13314869 gattcgaagaatcttaaccgttgcttacttttctgcaaccaaaa-acaggtaaatttgttcagttgcaaacatataaaaattgcaactctctaac 13314962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 24114161 - 24114244
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| ||||||||||||| ||||||||||    ||||||| |  ||| ||||||||| || ||||| |||||||||||||    
T  24114161 gattcgaagaatcctaaccgctgcttacttttcagataccaaaacaggtaaacttgctctgctgcaaacagataaaaattgcaa 24114244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 24269818 - 24269775
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa 79  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||    
T  24269818 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaa 24269775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 34497214 - 34497132
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||||||| | |||| |||||| ||||| || ||  | |||||||||||||||||  ||||||||||| |||||||||    
T  34497214 aaaataagtaacgtggattgtttggacgaaacgacagtctctatggatacgatactctactaatcactttattacttggtaaa 34497132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 14075692 - 14075611
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||  |||| ||||   ||||| |||||||||||||||||||| |||||  |||||||| || |||||||||    
T  14075692 aaataagtaacgcacattgtttggttgaaacgacaatccatgtggatacgatagtctacttatcactttcttacttggtaaa 14075611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 27659545 - 27659472
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttatt 303  Q
    ||||||||||||| || | || |||||| ||||| |||||| ||| |||||||||||||||  |||||||||||    
T  27659545 aaaaataagtaactcggaatgtttggacgaaacgacaatccttgtagatacgatactctacttatcactttatt 27659472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 44010903 - 44010984
Alignment:
Q  38 ttcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacata-agcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||| |||| |||||||| |||||| |||| ||||||||| ||||  | |||| ||||||| |||||||||||||||||||    
T  44010903 ttcgaagaatcttaaccgctacttactcttctgcaaccaaaa-acatgtaacttgttctgttgcaaacatataaaaattgcaa 44010984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 6885061 - 6885000
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactc 289  Q
    |||| |||||||||| ||| | ||| |||||| ||||| |||||||||| ||||||||||||    
T  6885061 aacttaaaataagtagcgcaagttgtttggacgaaacgacaatccatgtagatacgatactc 6885000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 13697964 - 13697895
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    |||| |||| ||||||||||||||   ||| |||||| |||||  ||||| |||||||||||||||||||    
T  13697964 tcgtcaacttaaaataagtaacgcaggttgtttggacgaaacgaaaatccttgtggatacgatactctac 13697895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 18448540 - 18448624
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa 313  Q
    ||||||||||||||| |||||| |||||||||||| |||||  | | |||||||| |||||   || |||||||| |||||||||    
T  18448540 taaaaataagtaacgagaattgtttggacaaaacgacaatctctattgatacgatgctctaattattactttattacttggtaaa 18448624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 313
Target Start/End: Original strand, 30783775 - 30783823
Alignment:
Q  267 caatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||| ||||||||||||||||||||  ||||||||||| |||||||||    
T  30783775 caatctatgtggatacgatactctacttatcactttattacttggtaaa 30783823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 44011052 - 44011105
Alignment:
Q  261 aaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    ||||| |||||||||||||||||||||||||| | ||||||||| ||| |||||    
T  44011052 aaacgacaatccatgtggatacgatactctacttacactttattacttcgtaaa 44011105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 17101896 - 17101975
Alignment:
Q  236 ataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||| |  |||| |||||  ||||| |||||| | |||||||||||||||||  ||||||||||| |||||||||    
T  17101896 ataagtaacacatattgtttggatgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaa 17101975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 26394576 - 26394644
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaac 104  Q
    |||||||| ||||||||||| | ||||||||||| ||||||||| |  ||| |||||| ||||| ||||    
T  26394576 gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctttgttgcaaac 26394644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 657 - 569
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| ||||||||||||| ||||||||||| ||||||||| |  |||  | ||||||||| ||||| |||||||||||||    
T  657 gaggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 542 - 480
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat 294  Q
    |||||||| ||||  |||||| | |||| ||| | ||||||||||||||||||||||||||||    
T  542 aaaaataattaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacat 480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 35641 - 35531
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactcta--catcactttattccttggtaaa-ggttcgataca 324  Q
    |||| ||||||||||| |||||||| |||||| |||||  ||||||||||||||| ||||||||   ||||||||||| |||| |||| | || ||||||    
T  35641 aacttaaaataagtaaggcgaattgtttggacgaaacgaaaatccatgtggatacaatactctatttatcactttattacttgataaacgattagataca 35542  T
Q  325 tttgcctaatc 335  Q
    ||||| |||||    
T  35541 tttgcataatc 35531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 35759 - 35663
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaaatctctaacccttt 133  Q
    |||| ||| |||| |||||||| ||||| ||||| ||||||||| |  ||| |||||| ||||| | ||| |||||||||||||||||||||||||||    
T  35759 gatttgaagaatcttaaccgctgcttacctttctgcaaccaaaacaggtaa-cttgctttgttgcagacaaataaaaattgcaaatctctaacccttt 35663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 310
Target Start/End: Complemental strand, 3631 - 3551
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggt 310  Q
    |||||||||||||  |||||| | |||| ||| | ||||||||||||||||||||||||||  ||||||||||| ||||||    
T  3631 aaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttggt 3551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 334
Target Start/End: Complemental strand, 6385 - 6282
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgcc 330  Q
    |||||||||| |||||||| |||||| ||||  |||||||||||||||||||||| |||  || |||||||| ||| ||||| | || |||||| |||||    
T  6385 aaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatacgatactttacttatgactttattacttcgtaaacgatttgatacacttgcc 6286  T
Q  331 taat 334  Q
    ||||    
T  6285 taat 6282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 701 - 783
Alignment:
Q  38 ttcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||| |||| |||||||||||||||||||| ||||||||| |||  ||| ||| |||||||| ||||| |||||||||||||    
T  701 ttcgaagaatcttaaccgcttcttacttttctgcaaccaaaa-acaggtaaactttctctgttgcaaacagataaaaattgcaa 783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 821 - 904
Alignment:
Q  231 taaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaa 312  Q
    ||||||||||||||| | |||| |||||| ||||| |||||    |||||||||||||||||  ||||||||||| ||||||||    
T  821 taaaaataagtaacgtggattgtttggacgaaacgacaatctcaatggatacgatactctacttatcactttattacttggtaa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 2818 - 2874
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactc 289  Q
    |||||||||||| ||||||| |||||| ||||| |||| ||||||||||||||||||    
T  2818 aaaataagtaacacgaattgtttggacgaaacgacaattcatgtggatacgatactc 2874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 35990 - 36077
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| |||||||||||| ||||||  |||||  ||||| |||| |||||||||||||||||||||  ||||||||||| ||| |||||    
T  35990 aacttaaaataagtaacacgaattatttggatgaaacgacaattcatgtggatacgatactctacttatcactttattacttagtaaa 36077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 35871 - 35968
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaat-acataagcttgctctgttgtaaacatataaaaattgcaaatctctaacccttt 133  Q
    ||||| || ||||||||||||| ||||||||||| |||||||||| |  ||| ||| || ||||  ||| | |||||||||||||||||||||||||||    
T  35871 gattctaagaatcctaaccgctgcttacttttctgcaaccaaaatcaggtaa-ctttctttgttccaaatagataaaaattgcaaatctctaacccttt 35968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 70013 - 69930
Alignment:
Q  232 aaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||||| |||||| |||||| ||||| |||||| |||| |||||||||| |||   |||||||||| |||||||||    
T  70013 aaaaataagtaacgagaattgtttggacgaaacgacaatccttgtgtatacgatactttacttgtcactttattacttggtaaa 69930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 70125 - 70050
Alignment:
Q  45 aatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    ||||||||| ||| ||||||||||| ||||||||| |||  ||| |||||||| ||| ||||| |||||||||||||    
T  70125 aatcctaactgctgcttacttttctacaaccaaaa-acaggtaaacttgctctattgcaaacaaataaaaattgcaa 70050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 181706 - 181786
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactc-tacatcactttattccttggtaa 312  Q
    |||||||||||| ||| ||  |||||||||||| ||||| ||||||||||||||||| |  ||||||||||| ||||||||    
T  181706 aaaataagtaacacgacttatttggacaaaacgacaatctatgtggatacgatactcatttatcactttattacttggtaa 181786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 15494 - 15572
Alignment:
Q  262 aacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa-ggttcgatacatttgcctaatccg 337  Q
    |||| ||||||||||||||||||||||||||  || |||||||| ||||||||| | || |||||| ||||||||||||    
T  15494 aacgacaatccatgtggatacgatactctacatattactttattacttggtaaatgatttgatacacttgcctaatccg 15572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 21486 - 21403
Alignment:
Q  36 gattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| |||||||| |||| |||||||||||  |||||||| |  ||| ||| |||||||| ||||| |||||||||||||    
T  21486 gattcgaagaatcctaatcgctacttacttttctgaaaccaaaacaggtaaacttcctctgttgcaaacaaataaaaattgcaa 21403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 25201 - 25113
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||| ||| ||||||||||| | ||||||||||| ||||||||| |  ||| |||||||||||| ||| | | |||||||||||    
T  25201 gaggggatttgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagagaaaaattgcaa 25113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 313
Target Start/End: Complemental strand, 833 - 745
Alignment:
Q  228 aactaaaaataagtaacg-cgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||| ||||||||||||| || |||| |||||| ||||| |||||| ||| ||||| |||||||||  ||||||||||| |||||||||    
T  833 aacttaaaataagtaacgtcggattgtttggacgaaacgacaatccttgttgatacaatactctacttatcactttattacttggtaaa 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 72237 - 72148
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaa-tacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| |||||| ||  || ||||||||||| |||| |||| ||| ||| |||||||||||| ||||| |||||||||||||    
T  72237 gaggggattcgaagaatccttactactgcttacttttctgcaactaaaaatacgtaaacttgctctgttgcaaacagataaaaattgcaa 72148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 39792 - 39724
Alignment:
Q  50 taaccgcttcttacttttcttcaaccaaaatacataagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||||||| ||||||||||| ||||||||| |  ||| |||||||||||| ||||| |||||||||||||    
T  39792 taaccgctgcttacttttctgcaaccaaaacaggtaa-cttgctctgttgcaaacagataaaaattgcaa 39724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 39662 - 39601
Alignment:
Q  254 ttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    |||||||||||  ||||| ||||||||||||| ||||||  ||||||||||| |||||||||    
T  39662 ttggacaaaacaacaatcaatgtggatacgatgctctacttatcactttattacttggtaaa 39601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 338
Target Start/End: Complemental strand, 69185 - 69073
Alignment:
Q  228 aactaaaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaaggttcgatacat 325  Q
    ||||||||||||| || || ||||| ||||| |||  | |||||| |||||||||||| ||| ||  ||||||||||| |||||||| | || | ||||     
T  69185 aactaaaaataagcaatgcaaattgtttggagaaagtgacaatccttgtggatacgattctcaacttatcactttattacttggtaatgatttggtacac 69086  T
Q  326 ttgcctaatccgc 338  Q
    |||||||||||||    
T  69085 ttgcctaatccgc 69073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 313
Target Start/End: Complemental strand, 3217 - 3170
Alignment:
Q  267 caatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  3217 caatccgtgtggatacgatactctacatacactttattacttggtaaa 3170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 2469 - 2410
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||| |||||| ||||| |||||  ||| | ||||||||||||||||||||||||||    
T  2469 aaaataattaacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctac 2410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 2500 - 2441
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctac 292  Q
    ||||||| |||||| ||||| |||||  ||| | ||||||||||||||||||||||||||    
T  2500 aaaataattaacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctac 2441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 76631 - 76542
Alignment:
Q  31 gaggagattcgaaaaatcctaaccgcttcttacttttcttcaaccaaaataca--taagcttgctctgttgtaaacatataaaaattgcaa 119  Q
    |||| |||||||| |||||||| || | ||||||||||| ||||||||| |||  |||  ||||| |||||||||||||||||| ||||||    
T  76631 gaggggattcgaagaatcctaatcggtgcttacttttctacaaccaaaa-acaggtaaatttgctatgttgtaaacatataaaatttgcaa 76542  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 54970 - 54877
Alignment:
Q  223 tcgttaactaaaaataagtaacgcgaattggttggac-aaaacggcaatccatgtggatacgatactctac--atcactttattccttggtaaa 313  Q
    ||||||||| |||||||||||||| |  |  || ||| |||||| |||||| ||||||||| |||||||||  ||||||||||| |||||||||    
T  54970 tcgttaacttaaaataagtaacgcaagctatttagacgaaaacgacaatccctgtggatacaatactctacttatcactttattacttggtaaa 54877  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 89854 - 89935
Alignment:
Q  233 aaaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactctacat-cactttattccttggtaaa 313  Q
    |||||||||||||||| ||| || ||| ||||| |||| | ||| |||| |||||||||| | ||||||||| |||||||||    
T  89854 aaaataagtaacgcgagttgtttagacgaaacgacaatacttgtagatatgatactctacttacactttattacttggtaaa 89935  T

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Target: scaffold0653 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 4484 - 4540
Alignment:
Q  234 aaataagtaacgcgaattggttggacaaaacggcaatccatgtggatacgatactct 290  Q
    ||||||||||| ||||||| ||  || ||| | ||||||||||||||||||||||||    
T  4484 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactct 4540  T

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Target: scaffold0062 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 43156 - 43199
Alignment:
Q  88 cttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||    
T  43156 cttgctctgttgcaaacagataaaaattgc-aatctctaaccctt 43199  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 168228 - 168271
Alignment:
Q  88 cttgctctgttgtaaacatataaaaattgcaaatctctaaccctt 132  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||    
T  168228 cttgctctgttgcaaacagataaaaattg-aaatctctaaccctt 168271  T

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