View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18686_low_17 (Length: 328)

Name: NF18686_low_17
Description: NF18686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18686_low_17
NF18686_low_17
[»] chr2 (50 HSPs)
chr2 (5-309)||(43585791-43586095)
chr2 (44-138)||(24067758-24067852)
chr2 (63-128)||(12224250-12224315)
chr2 (56-128)||(2438686-2438758)
chr2 (56-128)||(5040754-5040826)
chr2 (43-89)||(13501084-13501130)
chr2 (50-128)||(18570986-18571064)
chr2 (29-93)||(14373429-14373493)
chr2 (45-93)||(14450797-14450845)
chr2 (5-124)||(15972842-15972961)
chr2 (56-126)||(37558997-37559067)
chr2 (46-87)||(24067263-24067304)
chr2 (43-100)||(33884058-33884115)
chr2 (43-100)||(37211880-37211937)
chr2 (49-129)||(20242693-20242773)
chr2 (49-100)||(8300214-8300265)
chr2 (43-94)||(18512143-18512194)
chr2 (84-154)||(14450708-14450778)
chr2 (84-154)||(17895824-17895894)
chr2 (50-124)||(18840984-18841058)
chr2 (50-116)||(30404829-30404895)
chr2 (50-128)||(38117126-38117204)
chr2 (50-104)||(45000837-45000891)
chr2 (56-101)||(19536391-19536436)
chr2 (84-129)||(24009343-24009388)
chr2 (43-100)||(37491850-37491907)
chr2 (28-93)||(44605141-44605206)
chr2 (54-98)||(31026713-31026757)
chr2 (84-128)||(37419802-37419846)
chr2 (50-89)||(10535765-10535804)
chr2 (50-93)||(22131256-22131299)
chr2 (42-81)||(26787812-26787851)
chr2 (46-93)||(44984652-44984699)
chr2 (50-100)||(896225-896275)
chr2 (50-128)||(5367206-5367284)
chr2 (48-94)||(11223864-11223910)
chr2 (43-85)||(11439802-11439844)
chr2 (63-101)||(21624294-21624332)
chr2 (62-116)||(28596495-28596549)
chr2 (50-100)||(34006986-34007036)
chr2 (62-128)||(34993949-34994015)
chr2 (50-128)||(37411211-37411289)
chr2 (43-93)||(42665615-42665665)
chr2 (50-95)||(6180865-6180910)
chr2 (50-95)||(12668423-12668468)
chr2 (56-101)||(18255974-18256019)
chr2 (84-129)||(36096330-36096375)
chr2 (106-142)||(8300188-8300224)
chr2 (5-100)||(30298444-30298537)
chr2 (50-78)||(40681996-40682024)
[»] chr7 (48 HSPs)
chr7 (19-150)||(5937366-5937497)
chr7 (55-150)||(25956464-25956558)
chr7 (5-95)||(1885542-1885632)
chr7 (5-154)||(22801671-22801831)
chr7 (43-152)||(48963995-48964114)
chr7 (43-100)||(2144533-2144591)
chr7 (50-128)||(21880166-21880244)
chr7 (50-115)||(25481916-25481981)
chr7 (44-129)||(39138452-39138537)
chr7 (46-82)||(2143866-2143902)
chr7 (43-99)||(13094709-13094765)
chr7 (54-128)||(598226-598300)
chr7 (50-128)||(8234160-8234238)
chr7 (5-95)||(27945010-27945100)
chr7 (50-100)||(28155584-28155634)
chr7 (56-94)||(36013799-36013837)
chr7 (56-125)||(15680829-15680898)
chr7 (64-125)||(21864836-21864897)
chr7 (50-91)||(38134410-38134451)
chr7 (50-87)||(44172898-44172935)
chr7 (43-88)||(44317293-44317338)
chr7 (65-121)||(7197271-7197327)
chr7 (50-94)||(7438720-7438764)
chr7 (43-95)||(9050133-9050185)
chr7 (50-102)||(12843027-12843079)
chr7 (43-87)||(35238192-35238236)
chr7 (50-105)||(4909165-4909220)
chr7 (50-128)||(5409798-5409881)
chr7 (43-94)||(36196787-36196838)
chr7 (50-93)||(37775996-37776039)
chr7 (43-94)||(37820087-37820138)
chr7 (50-96)||(2525843-2525889)
chr7 (42-80)||(6091333-6091371)
chr7 (50-100)||(10893342-10893392)
chr7 (54-100)||(10893864-10893910)
chr7 (56-94)||(17257990-17258028)
chr7 (42-72)||(31377006-31377036)
chr7 (28-93)||(9037719-9037784)
chr7 (43-88)||(10702551-10702595)
chr7 (48-81)||(18678160-18678193)
chr7 (50-95)||(24339656-24339701)
chr7 (5-102)||(26733273-26733370)
chr7 (50-95)||(31808509-31808554)
chr7 (49-94)||(48438559-48438604)
chr7 (50-126)||(5835261-5835337)
chr7 (49-129)||(18212999-18213079)
chr7 (84-128)||(24339701-24339745)
chr7 (50-82)||(35917393-35917425)
[»] chr4 (55 HSPs)
chr4 (43-152)||(13307884-13307993)
chr4 (43-142)||(44362673-44362772)
chr4 (49-154)||(37496717-37496833)
chr4 (42-100)||(13117435-13117493)
chr4 (50-128)||(23292953-23293031)
chr4 (56-123)||(12797310-12797377)
chr4 (43-100)||(13484030-13484088)
chr4 (56-129)||(49431046-49431119)
chr4 (11-93)||(11797630-11797715)
chr4 (50-125)||(29205458-29205533)
chr4 (50-128)||(8423685-8423763)
chr4 (43-154)||(10634997-10635120)
chr4 (50-116)||(21945517-21945583)
chr4 (50-128)||(28964215-28964293)
chr4 (63-116)||(16073421-16073474)
chr4 (35-95)||(22799893-22799951)
chr4 (54-154)||(5998835-5998934)
chr4 (11-95)||(16303266-16303350)
chr4 (50-110)||(54580008-54580068)
chr4 (45-88)||(10164861-10164904)
chr4 (73-128)||(34306771-34306826)
chr4 (105-152)||(39619045-39619092)
chr4 (50-100)||(683066-683115)
chr4 (43-77)||(28663499-28663533)
chr4 (52-125)||(40224468-40224541)
chr4 (56-101)||(42640549-42640594)
chr4 (50-94)||(24613702-24613746)
chr4 (56-128)||(715572-715646)
chr4 (56-128)||(752898-752972)
chr4 (50-93)||(18513243-18513286)
chr4 (22-105)||(21345523-21345606)
chr4 (56-95)||(30298967-30299006)
chr4 (56-95)||(30327835-30327874)
chr4 (50-116)||(34589682-34589751)
chr4 (57-116)||(56049897-56049956)
chr4 (50-116)||(2361954-2362020)
chr4 (50-80)||(5654606-5654636)
chr4 (46-119)||(9298943-9299017)
chr4 (50-88)||(9988706-9988744)
chr4 (50-80)||(10546162-10546192)
chr4 (45-95)||(27624092-27624142)
chr4 (50-100)||(33950150-33950200)
chr4 (84-129)||(5414127-5414172)
chr4 (56-101)||(6879459-6879504)
chr4 (50-95)||(12895116-12895161)
chr4 (43-112)||(35062452-35062520)
chr4 (56-93)||(47492399-47492436)
chr4 (50-94)||(847965-848009)
chr4 (56-116)||(4157169-4157229)
chr4 (56-116)||(4157456-4157516)
chr4 (50-82)||(8457939-8457971)
chr4 (106-154)||(13484078-13484126)
chr4 (50-90)||(14465299-14465339)
chr4 (50-78)||(26276026-26276054)
chr4 (84-128)||(30982834-30982878)
[»] chr6 (56 HSPs)
chr6 (5-149)||(1334630-1334774)
chr6 (5-151)||(26402624-26402772)
chr6 (43-99)||(6751878-6751934)
chr6 (24-154)||(19369805-19369923)
chr6 (43-154)||(32225331-32225442)
chr6 (50-128)||(28715309-28715387)
chr6 (43-141)||(29959182-29959281)
chr6 (50-124)||(34595148-34595222)
chr6 (43-87)||(10031577-10031621)
chr6 (56-128)||(28152118-28152190)
chr6 (80-154)||(26178527-26178601)
chr6 (43-95)||(22745964-22746016)
chr6 (14-89)||(5579632-5579707)
chr6 (84-154)||(785385-785455)
chr6 (44-102)||(7377987-7378045)
chr6 (58-95)||(785455-785492)
chr6 (50-91)||(10157998-10158039)
chr6 (23-95)||(9024176-9024248)
chr6 (43-99)||(16516948-16517004)
chr6 (50-101)||(426508-426559)
chr6 (50-125)||(13364675-13364750)
chr6 (62-125)||(32978869-32978932)
chr6 (50-116)||(7265572-7265638)
chr6 (50-100)||(7977825-7977875)
chr6 (50-128)||(17841556-17841634)
chr6 (50-116)||(33001268-33001334)
chr6 (33-82)||(31430277-31430326)
chr6 (50-94)||(4859114-4859158)
chr6 (50-148)||(7942269-7942373)
chr6 (43-99)||(16503682-16503738)
chr6 (50-93)||(10335378-10335421)
chr6 (50-128)||(853826-853904)
chr6 (62-128)||(4877969-4878034)
chr6 (50-96)||(9629397-9629443)
chr6 (90-128)||(17327617-17327655)
chr6 (28-89)||(31327806-31327868)
chr6 (54-100)||(34057972-34058018)
chr6 (37-95)||(34197112-34197170)
chr6 (43-80)||(5635903-5635940)
chr6 (57-102)||(6898274-6898319)
chr6 (50-95)||(9617448-9617493)
chr6 (50-95)||(10770674-10770719)
chr6 (64-101)||(16388211-16388248)
chr6 (84-129)||(16488545-16488590)
chr6 (50-95)||(16766711-16766756)
chr6 (68-125)||(23771610-23771667)
chr6 (84-128)||(8365475-8365519)
chr6 (50-102)||(8776966-8777018)
chr6 (84-128)||(10339081-10339125)
chr6 (42-82)||(14514794-14514834)
chr6 (50-94)||(15489733-15489777)
chr6 (84-128)||(16766756-16766800)
chr6 (50-102)||(19040366-19040418)
chr6 (56-116)||(24645501-24645561)
chr6 (66-110)||(30851630-30851674)
chr6 (43-95)||(34868157-34868209)
[»] chr8 (51 HSPs)
chr8 (14-129)||(26915201-26915321)
chr8 (11-134)||(42874497-42874620)
chr8 (43-151)||(34073922-34074030)
chr8 (19-154)||(10497746-10497892)
chr8 (43-94)||(27733854-27733905)
chr8 (46-89)||(31119097-31119140)
chr8 (50-128)||(40332205-40332283)
chr8 (50-110)||(20873083-20873143)
chr8 (43-94)||(24295138-24295189)
chr8 (5-86)||(22600497-22600579)
chr8 (33-78)||(1639487-1639532)
chr8 (50-102)||(4948666-4948718)
chr8 (80-128)||(5813636-5813684)
chr8 (50-110)||(26434194-26434254)
chr8 (50-94)||(31548294-31548338)
chr8 (50-125)||(3025565-3025640)
chr8 (44-99)||(3954376-3954431)
chr8 (44-99)||(18170478-18170533)
chr8 (44-99)||(18634046-18634101)
chr8 (50-129)||(20679361-20679440)
chr8 (50-100)||(1433359-1433409)
chr8 (50-100)||(12985406-12985456)
chr8 (22-128)||(14134685-14134791)
chr8 (50-128)||(36450721-36450799)
chr8 (50-103)||(31236569-31236622)
chr8 (84-129)||(34450987-34451032)
chr8 (56-125)||(44462165-44462234)
chr8 (56-125)||(44469698-44469767)
chr8 (23-95)||(5307048-5307119)
chr8 (43-79)||(6960692-6960728)
chr8 (50-94)||(29447111-29447155)
chr8 (56-95)||(10002163-10002202)
chr8 (43-90)||(11246084-11246131)
chr8 (47-110)||(24413544-24413607)
chr8 (5-123)||(926760-926878)
chr8 (43-89)||(2652346-2652391)
chr8 (50-80)||(29198494-29198524)
chr8 (48-77)||(1591311-1591340)
chr8 (28-77)||(14227214-14227263)
chr8 (49-140)||(20658475-20658562)
chr8 (50-95)||(22651990-22652035)
chr8 (56-101)||(24613540-24613585)
chr8 (50-95)||(24669447-24669492)
chr8 (50-95)||(25566855-25566900)
chr8 (54-95)||(31681830-31681871)
chr8 (50-94)||(4298887-4298931)
chr8 (50-78)||(10441217-10441245)
chr8 (21-80)||(16230105-16230165)
chr8 (50-94)||(31586278-31586322)
chr8 (50-78)||(34201063-34201091)
chr8 (5-89)||(44067485-44067569)
[»] chr3 (45 HSPs)
chr3 (57-154)||(34834869-34834965)
chr3 (43-124)||(14338454-14338535)
chr3 (50-128)||(10954966-10955044)
chr3 (50-128)||(20503479-20503557)
chr3 (42-138)||(6984770-6984865)
chr3 (43-95)||(49179715-49179767)
chr3 (48-126)||(35222950-35223028)
chr3 (50-128)||(55401089-55401167)
chr3 (50-128)||(28918015-28918095)
chr3 (50-107)||(23271982-23272039)
chr3 (50-95)||(44427855-44427900)
chr3 (56-128)||(40993302-40993374)
chr3 (50-100)||(20691333-20691383)
chr3 (50-100)||(27858354-27858404)
chr3 (44-129)||(13845491-13845576)
chr3 (50-99)||(40150567-40150616)
chr3 (64-128)||(7171529-7171593)
chr3 (43-95)||(15864252-15864304)
chr3 (5-128)||(24205008-24205131)
chr3 (22-78)||(41319327-41319383)
chr3 (50-101)||(8383271-8383322)
chr3 (62-101)||(25775535-25775574)
chr3 (43-94)||(42076751-42076801)
chr3 (43-82)||(52558141-52558180)
chr3 (54-100)||(1502592-1502638)
chr3 (50-88)||(9210832-9210870)
chr3 (50-100)||(21149081-21149131)
chr3 (28-82)||(34409355-34409409)
chr3 (50-100)||(51206348-51206398)
chr3 (50-95)||(4990967-4991012)
chr3 (50-99)||(8587017-8587066)
chr3 (50-128)||(8789515-8789595)
chr3 (56-101)||(16000010-16000055)
chr3 (3-76)||(25652050-25652123)
chr3 (50-95)||(49651786-49651831)
chr3 (62-110)||(3865700-3865748)
chr3 (48-100)||(4946199-4946251)
chr3 (84-128)||(4987247-4987291)
chr3 (47-99)||(8593148-8593200)
chr3 (84-128)||(14832158-14832202)
chr3 (5-93)||(18268007-18268095)
chr3 (50-78)||(40017386-40017414)
chr3 (52-96)||(40697857-40697901)
chr3 (84-128)||(41961606-41961650)
chr3 (82-154)||(54690304-54690376)
[»] scaffold0314 (1 HSPs)
scaffold0314 (43-151)||(8955-9061)
[»] chr5 (46 HSPs)
chr5 (5-93)||(30080503-30080591)
chr5 (5-100)||(19167571-19167667)
chr5 (25-99)||(10010543-10010617)
chr5 (50-128)||(21576712-21576790)
chr5 (19-154)||(7621171-7621311)
chr5 (50-128)||(21191023-21191101)
chr5 (50-128)||(27932249-27932327)
chr5 (45-100)||(16207586-16207641)
chr5 (43-94)||(21319946-21319997)
chr5 (62-132)||(11084325-11084395)
chr5 (22-95)||(32444752-32444825)
chr5 (50-98)||(8420041-8420089)
chr5 (42-82)||(42192282-42192322)
chr5 (53-100)||(2548404-2548451)
chr5 (50-101)||(6247636-6247687)
chr5 (50-128)||(31084337-31084420)
chr5 (52-94)||(10009842-10009884)
chr5 (56-102)||(15884008-15884054)
chr5 (43-89)||(26205766-26205812)
chr5 (50-128)||(30502355-30502433)
chr5 (50-128)||(30542698-30542776)
chr5 (50-128)||(42893374-42893452)
chr5 (50-99)||(24906297-24906346)
chr5 (43-88)||(38784813-38784858)
chr5 (48-96)||(15294943-15294991)
chr5 (50-102)||(28588667-28588719)
chr5 (56-128)||(43564901-43564973)
chr5 (119-154)||(9031879-9031914)
chr5 (50-104)||(11596448-11596500)
chr5 (84-127)||(21542089-21542132)
chr5 (50-89)||(31264452-31264491)
chr5 (50-100)||(4445154-4445204)
chr5 (50-100)||(6326292-6326342)
chr5 (50-116)||(26312783-26312849)
chr5 (63-129)||(30099004-30099070)
chr5 (50-80)||(43208289-43208319)
chr5 (43-93)||(9031925-9031977)
chr5 (84-129)||(21814320-21814365)
chr5 (50-123)||(23012380-23012453)
chr5 (50-95)||(28296342-28296387)
chr5 (50-115)||(32630715-32630780)
chr5 (50-95)||(41558654-41558699)
chr5 (84-128)||(21522809-21522853)
chr5 (84-128)||(21533375-21533419)
chr5 (56-100)||(33178045-33178089)
chr5 (54-102)||(42029770-42029818)
[»] scaffold0504 (1 HSPs)
scaffold0504 (43-154)||(8643-8749)
[»] chr1 (55 HSPs)
chr1 (24-119)||(17893853-17893949)
chr1 (50-128)||(18337343-18337421)
chr1 (56-128)||(1815277-1815349)
chr1 (54-122)||(19637786-19637854)
chr1 (50-102)||(38078654-38078706)
chr1 (56-128)||(51410045-51410117)
chr1 (25-80)||(3921656-3921711)
chr1 (28-95)||(40176595-40176662)
chr1 (50-128)||(40258900-40258978)
chr1 (21-91)||(40686762-40686832)
chr1 (50-128)||(46348350-46348428)
chr1 (54-107)||(7988439-7988492)
chr1 (46-87)||(18946042-18946083)
chr1 (46-95)||(24462270-24462319)
chr1 (56-101)||(50195459-50195504)
chr1 (24-72)||(24806933-24806981)
chr1 (42-94)||(28170388-28170439)
chr1 (54-98)||(31667443-31667487)
chr1 (46-110)||(43966816-43966880)
chr1 (50-93)||(14332422-14332465)
chr1 (50-101)||(41877464-41877515)
chr1 (6-93)||(46748910-46748997)
chr1 (56-102)||(17007954-17008000)
chr1 (50-128)||(22515854-22515932)
chr1 (28-89)||(24176811-24176873)
chr1 (55-125)||(29163351-29163421)
chr1 (66-128)||(37598861-37598923)
chr1 (50-128)||(40181885-40181963)
chr1 (50-128)||(42359416-42359494)
chr1 (47-96)||(7888106-7888155)
chr1 (52-100)||(11412763-11412811)
chr1 (50-102)||(22881609-22881661)
chr1 (84-128)||(32461420-32461464)
chr1 (50-128)||(1486671-1486754)
chr1 (36-79)||(11571585-11571628)
chr1 (62-101)||(19058850-19058889)
chr1 (56-95)||(26390133-26390172)
chr1 (41-88)||(34184673-34184720)
chr1 (63-101)||(24334699-24334737)
chr1 (50-116)||(36878475-36878541)
chr1 (46-80)||(50233411-50233445)
chr1 (50-95)||(6612171-6612216)
chr1 (50-87)||(8203835-8203872)
chr1 (14-90)||(18950925-18951002)
chr1 (50-95)||(24577186-24577231)
chr1 (84-129)||(25934675-25934720)
chr1 (44-100)||(40317810-40317867)
chr1 (50-94)||(2445884-2445928)
chr1 (49-125)||(12918958-12919034)
chr1 (90-142)||(14613061-14613113)
chr1 (50-90)||(31015057-31015097)
chr1 (56-128)||(33202923-33202995)
chr1 (50-78)||(40747790-40747818)
chr1 (84-128)||(40917808-40917852)
chr1 (7-95)||(47989469-47989556)
[»] scaffold0024 (1 HSPs)
scaffold0024 (22-93)||(18110-18181)
[»] scaffold0652 (1 HSPs)
scaffold0652 (50-124)||(433-507)
[»] scaffold0083 (1 HSPs)
scaffold0083 (62-116)||(45509-45563)
[»] scaffold0050 (1 HSPs)
scaffold0050 (50-116)||(70292-70358)
[»] scaffold0053 (1 HSPs)
scaffold0053 (73-128)||(8835-8890)
[»] scaffold0361 (1 HSPs)
scaffold0361 (50-128)||(14544-14619)
[»] scaffold0793 (1 HSPs)
scaffold0793 (56-128)||(4848-4922)
[»] scaffold0512 (1 HSPs)
scaffold0512 (73-115)||(5016-5058)
[»] scaffold0049 (2 HSPs)
scaffold0049 (50-100)||(63787-63837)
scaffold0049 (50-95)||(56936-56981)
[»] scaffold0122 (1 HSPs)
scaffold0122 (89-142)||(10260-10313)
[»] scaffold0103 (1 HSPs)
scaffold0103 (50-110)||(51825-51888)
[»] scaffold0011 (1 HSPs)
scaffold0011 (21-94)||(240022-240095)
[»] scaffold0571 (1 HSPs)
scaffold0571 (50-82)||(7704-7736)
[»] scaffold0450 (1 HSPs)
scaffold0450 (84-128)||(8591-8635)
[»] scaffold0007 (1 HSPs)
scaffold0007 (5-89)||(225274-225358)
[»] scaffold0003 (1 HSPs)
scaffold0003 (84-128)||(241653-241697)


Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-140; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 5 - 309
Target Start/End: Complemental strand, 43586095 - 43585791
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgata 104  Q
    ||||| |||||| ||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43586095 acaccggacacggtactgacactgacacgtcaacacagataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgata 43585996  T
Q  105 cgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacagaagtccttttagagaaaaagttacatggtctgagggcaatagatctccatt 204  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  43585995 cgtgtcagacacatggacacaccttcaatcagaagtgttcgtgcaacagaggtccttttagagaaaaagttacatggtctgagggcaatagatctccagt 43585896  T
Q  205 ttattggggaggaacacaaatcacaaaagctacaaaacaacctcgatcaaatcaaaaatcactagccaaaggtacatggtctgagggcatgaagacatag 304  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43585895 ttattggcgaggaacacaaatcacaaaagctacaaaacaacctcaatcaaatcaaaaatcactagccaaaggtacatggtctgagggcatgaagacatag 43585796  T
Q  305 ctata 309  Q
    |||||    
T  43585795 ctata 43585791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 24067758 - 24067852
Alignment:
Q  44 taaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaa 138  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||||||| ||||||| ||||||| ||||  | |||| | ||||||||||||    
T  24067758 taaaattttgagaaaatgtcataattaaatgaaatcacaagtgtcggtgtcagacacgacacgtgtcagacattgagacatgacttcaatcagaa 24067852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 12224250 - 12224315
Alignment:
Q  63 cataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  12224250 cataatccaatgtaattacaagtgtcggtgtcggacacgatacgtgtccgacactgggacacgcct 12224315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 2438758 - 2438686
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||| || |||| ||||| |||||||||||    
T  2438758 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcct 2438686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 5040754 - 5040826
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| ||| | |||||||||||    
T  5040754 aaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcct 5040826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 13501130 - 13501084
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcg 89  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  13501130 ataaaattttaagaaaatgacataattcaatgtaatcacaagtgtcg 13501084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 18570986 - 18571064
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||||||||||||||||||||||| | ||||| |||||| ||||||||| | || |||||  ||||||||||    
T  18570986 tttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgaacacgatacatatccgacaccaggacacgcct 18571064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 14373493 - 14373429
Alignment:
Q  29 acacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    |||||||||||  |||||||||||||   ||||||||||||||||||||||||| ||||||||||    
T  14373493 acacgtcaacaccaataaaattttgacgcaatgacataattcaatgtaatcacatgtgtcggtgt 14373429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 14450845 - 14450797
Alignment:
Q  45 aaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  14450845 aaaattttgagaaaatcacataattcaatgtaatcacaagtgtcagtgt 14450797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 15972842 - 15972961
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgata 104  Q
    |||||||| |||| || ||||| |||||| | |||  | ||| | ||||| ||||| ||| |||||| |||||| ||||||||||||||||||||||| |    
T  15972842 acaccagatacgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcggacacgaca 15972941  T
Q  105 cgtgtcggacacagggacac 124  Q
    |||||| ||| | |||||||    
T  15972942 cgtgtccgacgccgggacac 15972961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 37558997 - 37559067
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgc 126  Q
    ||||| ||||||||||||||||| |||||||||||||||||||  || ||||||| ||||| || ||||||    
T  37558997 aaaatcacataattcaatgtaattacaagtgtcggtgtcggacttgacacgtgtccgacaccggtacacgc 37559067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 24067263 - 24067304
Alignment:
Q  46 aaattttgagaaaatgacataattcaatgtaatcacaagtgt 87  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  24067263 aaattttgtgaaaatgacataattcaatgtaatcacaagtgt 24067304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 33884058 - 33884115
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||| |||||||||||||| ||||| |||||| |||||||||||||||| ||||    
T  33884058 ataaaattgtgagaaaatgacatgattcagtgtaattacaagtgtcggtgtcgaacac 33884115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 37211937 - 37211880
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||  ||||||||||    
T  37211937 ataaaatttcgagaaaatgacacaattcaatgtaattacaagtgtctatgtcggacac 37211880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 20242773 - 20242693
Alignment:
Q  49 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    |||| ||||||| |||||||||| |||||| | | ||||||||||||||||| | ||||||| |||||  |||||||||||    
T  20242773 tttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgcctt 20242693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 8300265 - 8300214
Alignment:
Q  49 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||||||||||||||| | |||||||| |||||||||||| ||||||    
T  8300265 ttttgagaaaatgacataatttagtgtaatcataagtgtcggtgttggacac 8300214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 18512194 - 18512143
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||| |||||    
T  18512194 ataaaattttgagaaaataatataattcaatgtaatcacatgtgtcagtgtc 18512143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 14450778 - 14450708
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 154  Q
    |||| |||||| |||| || | ||||| ||||| |||||||| |||||||||||||||| |||||||||||    
T  14450778 gtgttggtgtcagacaggacatgtgtcagacaccgggacacgtcttcaatcagaagtgtccgtgcaacaga 14450708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 17895894 - 17895824
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 154  Q
    |||| ||||||| ||||||||||||||||| |   ||||||||||||||||| |||||| | |||||||||    
T  17895894 gtgttggtgtcgaacacgatacgtgtcggatattaggacacgccttcaatcaaaagtgtccatgcaacaga 17895824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 18841058 - 18840984
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacac 124  Q
    ||||| ||||| |||||||| | |||||| ||||||||||||||| ||||||| || |||| ||||| |||||||    
T  18841058 tttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacac 18840984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 30404895 - 30404829
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||| ||||| |||||||||| |||||| ||||||||||| ||||||||||| || |||| |||||    
T  30404895 tttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcggacacgacacatgtccgacac 30404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 38117204 - 38117126
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| ||||| |||  |||||| |||||||| |||||||||||| | ||||||| ||||| |||||||||||    
T  38117204 tttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcggacacaacacgtgtccgacaccgggacacgcct 38117126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 45000891 - 45000837
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgata 104  Q
    ||||||||||||||| ||||||||||||||| | |||||||||||| || |||||    
T  45000891 tttgagaaaatgacacaattcaatgtaatcatatgtgtcggtgtcgtacgcgata 45000837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 19536436 - 19536391
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||    
T  19536436 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 24009343 - 24009388
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  24009343 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctt 24009388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 37491907 - 37491850
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||||||||||| || |||||||||||||| | | ||||||||||| |||||    
T  37491907 ataaaattttgagaaaataacttaattcaatgtaattaaatgtgtcggtgtcagacac 37491850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 44605206 - 44605141
Alignment:
Q  28 gacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    |||||||||||   ||||| | ||||||||||| ||||||||||||||||| ||| ||||||||||    
T  44605206 gacacgtcaacgccaataataatttgagaaaataacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 31026713 - 31026757
Alignment:
Q  54 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggac 98  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||    
T  31026713 agaaaatgacataattcaatgtaatcatatatgtcggtgtcggac 31026757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 37419802 - 37419846
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||    
T  37419802 gtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcct 37419846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 10535804 - 10535765
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcg 89  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  10535804 tttgagaaaatgacataattcagtgtaatcataagtgtcg 10535765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 22131299 - 22131256
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||    
T  22131299 tttgagaaaatgacattgttcaatgtaatcacatgtgtcggtgt 22131256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 26787851 - 26787812
Alignment:
Q  42 aataaaattttgagaaaatgacataattcaatgtaatcac 81  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  26787851 aataaaaatttgagaaaatgacataattcgatgtaatcac 26787812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 44984699 - 44984652
Alignment:
Q  46 aaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    ||||||||| ||||||| |||||||||||| |||||||||||| ||||    
T  44984699 aaattttgaaaaaatgatataattcaatgtgatcacaagtgtccgtgt 44984652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 896225 - 896275
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||||| ||||| ||||||||||||| | ||||||| |||||||||    
T  896225 tttgagaaaatcacatatttcaatgtaatcatatgtgtcggcgtcggacac 896275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 5367206 - 5367284
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||| |||| |||||||||| |||||| | | ||||||||||||||||||| || | || ||| | |||||||||||    
T  5367206 tttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgactccgggacacgcct 5367284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 11223910 - 11223864
Alignment:
Q  48 attttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||||| ||||| |||||||||| |||||| |||||||||||||||    
T  11223910 attttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 11439802 - 11439844
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagt 85  Q
    |||||||| ||||||||| |||||||||| |||||||||||||    
T  11439802 ataaaattatgagaaaataacataattcagtgtaatcacaagt 11439844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 21624294 - 21624332
Alignment:
Q  63 cataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  21624294 cataattcagtgtaattacaagtgtcggtgtcggacacg 21624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 28596495 - 28596549
Alignment:
Q  62 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    |||||| ||| |||||| | ||||||||||||||||||||| ||||||| |||||    
T  28596495 acataagtcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacac 28596549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 34007036 - 34006986
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||| |||||||||||| |||||||| | |||||||||| ||||||    
T  34007036 tttgagaaattgacataattcagtgtaatcataggtgtcggtgtgggacac 34006986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 34994015 - 34993949
Alignment:
Q  62 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||||||||| | | ||||| |||||| |||||| | ||||| ||||| |||||||||||    
T  34994015 acataattcaatgtaattatatgtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcct 34993949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 37411289 - 37411211
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||| |||||||||| ||| || | | |||||| ||||| ||||||  |||||| ||||| |||||||||||    
T  37411289 tttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccgacactgggacacgcct 37411211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 42665615 - 42665665
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    |||||||||||| || ||||||| |||||||||||||||| |||| |||||    
T  42665615 ataaaattttgaaaagatgacatgattcaatgtaatcacatgtgttggtgt 42665665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 6180910 - 6180865
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  6180910 tttgagaaaatgacatgattcaatgtaatcataagtgccggagtcg 6180865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 12668468 - 12668423
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| |||||||||||||||| |||||| | ||||||||||||||    
T  12668468 tttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcg 12668423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 18256019 - 18255974
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||| |||||||| |||||||| | ||||||||||||||||||||    
T  18256019 aaaatcacataatttaatgtaattagaagtgtcggtgtcggacacg 18255974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 36096375 - 36096330
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    |||||| |||||||||||| ||||||| ||||| ||||||||||||    
T  36096375 gtgtcgatgtcggacacgacacgtgtctgacacggggacacgcctt 36096330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 8300224 - 8300188
Alignment:
Q  106 gtgtcggacacagggacacgccttcaatcagaagtgt 142  Q
    |||| |||||| |||||||||||||||||||||||||    
T  8300224 gtgttggacaccgggacacgccttcaatcagaagtgt 8300188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 30298537 - 30298444
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||||||||||  || | |||||||| |||   |||| | ||| | |||||||||||||||| ||||||  || |||||||||||||||||    
T  30298537 acaccagacacgatacgaacgccgacacgtcgacaccgataataatttaataaaatgacataattcagtgtaat--catgtgtcggtgtcggacac 30298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 78
Target Start/End: Original strand, 40681996 - 40682024
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaat 78  Q
    |||||||||||||||||||||||||||||    
T  40681996 tttgagaaaatgacataattcaatgtaat 40682024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 5937497 - 5937366
Alignment:
Q  19 actgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacag 118  Q
    |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||      
T  5937497 actgacacagacacgtcaacacggataaaattttgagaaaatgacataattcaatgtaatcacaagtgtctgtgtcggtcacgatacatgtcggacacca 5937398  T
Q  119 ggacacgccttcaatcagaagtgttcgtgcaa 150  Q
    | | |||||||||||  ||||||| |||||||    
T  5937397 gaatacgccttcaatatgaagtgtccgtgcaa 5937366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 25956464 - 25956558
Alignment:
Q  55 gaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||    
T  25956464 gaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacatgtcggacac-gggacacgccttcaatcagaagtgtccgtgcaa 25956558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 1885542 - 1885632
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||||| ||||| |||||||| || ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1885542 acaccggacacgacactgatacggacacatcgacacggataaaattttgaaaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 1885632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 22801831 - 22801671
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcg-----------gtgt 93  Q
    ||||| || |||| ||| |||||||||||||||||   || ||||||||||| |||||||||||||| |||||||||||||||||           ||||    
T  22801831 acaccggaaacgacactaacacggacacgtcaacaccgatcaaattttgagataatgacataattcactgtaatcacaagtgtcggtgtattgtcagtgt 22801732  T
Q  94 cggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 154  Q
    | ||||| | || |||||||||| |||||||||||||||||||||||| | ||||||||||    
T  22801731 ctgacaccacacttgtcggacactgggacacgccttcaatcagaagtgctggtgcaacaga 22801671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 48964114 - 48963995
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc----------ggacacgatacgtgtcggacacagggacacgccttcaa 132  Q
    |||||||| |||||||||||||||||||||| ||||||||||||| ||||||          ||||||||||||||||| |||| ||||||  |||||||    
T  48964114 ataaaattgtgagaaaatgacataattcaatttaatcacaagtgttggtgtcgtgtaagtgtggacacgatacgtgtcgaacaccgggacataccttcaa 48964015  T
Q  133 tcagaagtgttcgtgcaaca 152  Q
    |||||||||| | |||||||    
T  48964014 tcagaagtgtccatgcaaca 48963995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 2144591 - 2144533
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtc-ggtgtcggacac 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  2144591 ataaaattttgagaaaatgacataattcaatgtaatcacacgtgtcaggtgtcggacac 2144533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 21880166 - 21880244
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||||| || |||| |||||  ||||||||||    
T  21880166 tttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcct 21880244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 25481916 - 25481981
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggaca 115  Q
    ||||| ||||| |||||||||| |||||| |||||||| |||||||||||||||| ||||| ||||    
T  25481916 tttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacgatatgtgtccgaca 25481981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 39138452 - 39138537
Alignment:
Q  44 taaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    |||| |||| ||||||| |||||||||| |||||| | |  ||||||||||||||||||||| ||||  |||| ||||||||||||    
T  39138452 taaattttttagaaaatcacataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacggggacacgcctt 39138537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 2143902 - 2143866
Alignment:
Q  46 aaattttgagaaaatgacataattcaatgtaatcaca 82  Q
    |||||||||||||||||||||||||||||||||||||    
T  2143902 aaattttgagaaaatgacataattcaatgtaatcaca 2143866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 13094765 - 13094709
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    |||||||||||||||||  | |||||||||||||||||| |||||||||||| ||||    
T  13094765 ataaaattttgagaaaactatataattcaatgtaatcactagtgtcggtgtccgaca 13094709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 598226 - 598300
Alignment:
Q  54 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||| || ||||| ||||||||   ||||||||||||| ||||||| ||||||| ||||| |||||||||||    
T  598226 agaaaatcacgtaattaaatgtaattgtaagtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcct 598300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 8234160 - 8234238
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| |||| | ||||||| ||||||||||||||| || |||| ||||| | |||||||||    
T  8234160 tttgaaaaaataacataattcagtgtagttacaagtgccggtgtcggacacgacacatgtccgacaccgagacacgcct 8234238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 27945010 - 27945100
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||||| || ||||| |||||| | |||  | ||| | ||||||||||| |||||||||| |||||| ||||||||||||||||    
T  27945010 acaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg 27945100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 28155584 - 28155634
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||||| |||||||||  |||||| |||||||||||||||||||||    
T  28155584 tttgagaaaattacataattcggtgtaattacaagtgtcggtgtcggacac 28155634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 36013837 - 36013799
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  36013837 aaaatgacataattcaatgtaatcacacgtgtcggtgtc 36013799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 15680829 - 15680898
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    ||||| |||||||| | |||||| | ||||||||||||||||||||| ||||||| ||||| | ||||||    
T  15680829 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccgagacacg 15680898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 21864836 - 21864897
Alignment:
Q  64 ataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    |||||| | |||||| |||||||||| |||||||||||| ||||||| ||||| ||||||||    
T  21864836 ataatttagtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacg 21864897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 38134451 - 38134410
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggt 91  Q
    ||||||||||||||||||||||||||||||| | ||||||||    
T  38134451 tttgagaaaatgacataattcaatgtaatcatatgtgtcggt 38134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 44172935 - 44172898
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgt 87  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  44172935 tttgagaaaatgacataattcaatgtaatcacatgtgt 44172898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 44317338 - 44317293
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtc 88  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||    
T  44317338 ataaaattttaaaaaaatgacataattcaatgtaatcataagtgtc 44317293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 7197327 - 7197271
Alignment:
Q  65 taattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacaggga 121  Q
    |||||||||||||| ||||||||||||||||||||| | || |||| ||||| ||||    
T  7197327 taattcaatgtaattacaagtgtcggtgtcggacacaacacatgtccgacaccggga 7197271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 7438720 - 7438764
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||||    
T  7438720 tttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 9050185 - 9050133
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||||| ||||||||||| |||||| |||||||| ||||| ||||||    
T  9050185 ataaaattttgaaaaaatgacatagttcaatataatcacatgtgtctgtgtcg 9050133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 12843079 - 12843027
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    |||||||||||||||||||| ||| |||||||| ||||| | |||||||||||    
T  12843079 tttgagaaaatgacataattgaatataatcacacgtgtctgggtcggacacga 12843027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 35238236 - 35238192
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgt 87  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||    
T  35238236 ataatattttgagaaaatgacataattcaatataatcacacgtgt 35238192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 4909165 - 4909220
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatac 105  Q
    ||||||||||| |||||||||| |||||||| | ||||| ||||||||||| ||||    
T  4909165 tttgagaaaattacataattcattgtaatcatatgtgtcagtgtcggacacaatac 4909220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 5409881 - 5409798
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg-----gacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| || ||| ||||||||||||||||     ||||||| ||||||| ||||| |||||||||||    
T  5409881 tttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcct 5409798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 36196787 - 36196838
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    |||||||||||||||||  |||||||||||  ||||||||||||| ||||||    
T  36196787 ataaaattttgagaaaacaacataattcaacataatcacaagtgttggtgtc 36196838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 37775996 - 37776039
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||    
T  37775996 tttgagaaaatgacataattaaatgtaatcacatgtgtcagtgt 37776039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 37820087 - 37820138
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    |||||||||||| ||||| |||||||| ||||||||| |||||||| |||||    
T  37820087 ataaaattttgaaaaaataacataatttaatgtaatcgcaagtgtcagtgtc 37820138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 2525889 - 2525843
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgg 96  Q
    |||||| ||||||||||||||||| |||||| | |||||||||||||    
T  2525889 tttgagcaaatgacataattcaatataatcatatgtgtcggtgtcgg 2525843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 6091333 - 6091371
Alignment:
Q  42 aataaaattttgagaaaatgacataattcaatgtaatca 80  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  6091333 aataaaattttgagaaaatgatataattcaatataatca 6091371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 10893392 - 10893342
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||||||||||||| ||||||||| || |||| ||| ||||||||    
T  10893392 tttgagaaaatgacataattgaatgtaatcgcatgtgttggtatcggacac 10893342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 10893910 - 10893864
Alignment:
Q  54 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||||||||| |||||||||||| |||| |||||| |||||    
T  10893910 agaaaatgacataattgaatgtaatcacatgtgttggtgtctgacac 10893864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 17258028 - 17257990
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  17258028 aaaataacataattcaatgtaatcataagtgtcggtgtc 17257990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 72
Target Start/End: Original strand, 31377006 - 31377036
Alignment:
Q  42 aataaaattttgagaaaatgacataattcaa 72  Q
    |||||||||||||||||||||||||||||||    
T  31377006 aataaaattttgagaaaatgacataattcaa 31377036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 9037784 - 9037719
Alignment:
Q  28 gacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    ||||||||||||   |||||||||||| ||||||| ||| |||||| |||||||| ||||| ||||    
T  9037784 gacacgtcaacatagataaaattttgaaaaaatgatatagttcaatataatcacatgtgtctgtgt 9037719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 10702595 - 10702551
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtc 88  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||    
T  10702595 ataaaattttgagaaaatgacat-attcaatgtaattataagtgtc 10702551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 18678160 - 18678193
Alignment:
Q  48 attttgagaaaatgacataattcaatgtaatcac 81  Q
    |||||||||||||||||||||||||| |||||||    
T  18678160 attttgagaaaatgacataattcaatataatcac 18678193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 24339656 - 24339701
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  24339656 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 26733273 - 26733370
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||||||||||| || ||||| |||||||| |||    ||| | ||||| ||||| |||||||||| | |||| | | |||||||||||||||||||    
T  26733273 acaccagacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggacacga 26733370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 31808554 - 31808509
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||||||| || |||||||||||||| |||| |||||||    
T  31808554 tttgagaaaatgacacaagtcaatgtaatcacatgtgttggtgtcg 31808509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 48438559 - 48438604
Alignment:
Q  49 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    |||||| ||||| ||||||||||||||||| ||| |||||||||||    
T  48438559 ttttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 5835261 - 5835337
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgc 126  Q
    ||||||||||| |||||||||| |||||| | | ||||||||||| |||| || | ||||| || || |||||||||    
T  5835261 tttgagaaaataacataattcagtgtaattatatgtgtcggtgtcagacatgacatgtgtctgataccgggacacgc 5835337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 18213079 - 18212999
Alignment:
Q  49 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    |||| ||||||| |||||||| | |||||| | | |||||||||||||||||||  | | || ||||| ||||||||||||    
T  18213079 tttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcggacacgacccctttctgacacggggacacgcctt 18212999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 24339701 - 24339745
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||||||||||| |||| || ||||| |||||||||||    
T  24339701 gtgtcggtgtcggacacgacacgtatccgacaccgggacacgcct 24339745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 35917425 - 35917393
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcaca 82  Q
    ||||||||||||| |||||||||||||||||||    
T  35917425 tttgagaaaatgatataattcaatgtaatcaca 35917393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 13307884 - 13307993
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||   |||| ||||||||||||||||||    
T  13307884 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgttggtgtcggacacgacacgtgtcagacaccatgacatgccttcaatcagaagtgt 13307983  T
Q  143 tcgtgcaaca 152  Q
    | ||||||||    
T  13307984 tggtgcaaca 13307993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 44362673 - 44362772
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgt 142  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||| |||| |||||||  ||||||| |||| ||||||||||||    
T  44362673 ataaaattttgagaaaatgacataatttaatgtaatcacaagtgttggtgtcagacacgacacgtatcggacatcgggacacaccttaaatcagaagtgt 44362772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 49 - 154
Target Start/End: Original strand, 37496717 - 37496833
Alignment:
Q  49 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt-----------cggacacgatacgtgtcggacacagggacacgccttcaatcaga 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||||||||| || |||||||||| |||||||||||||||||| |    
T  37496717 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgttgtgtcgttgccggacacgacacatgtcggacaccgggacacgccttcaatcata 37496816  T
Q  138 agtgttcgtgcaacaga 154  Q
    ||||| |||||||||||    
T  37496817 agtgtccgtgcaacaga 37496833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 13117435 - 13117493
Alignment:
Q  42 aataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13117435 aataaaatttggagaaaatgacaaaattcaatgtaatcacaagtgtcggtgtcggacac 13117493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 23293031 - 23292953
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| | |||| ||||||||||||||||||||||| ||||||| ||||| |||||||||||    
T  23293031 tttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcct 23292953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 12797377 - 12797310
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggaca 123  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||||||| |||| ||||| ||||||    
T  12797377 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccgggaca 12797310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 13484030 - 13484088
Alignment:
Q  43 ataaaattttgagaaaatgacataattc-aatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  13484030 ataaaattttgagaaaataacataattcaaatgtaatcacaagtgtcagtgtcggacac 13484088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 49431046 - 49431119
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    ||||| |||||||||| |||||| | ||||||||||||||||||||| |||||||  |||| ||||||||||||    
T  49431046 aaaatcacataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgtccaacaccgggacacgcctt 49431119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 11797715 - 11797630
Alignment:
Q  11 gacacgatactgacacggacacgtcaacaagaataaaattttgagaaaa---tgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    ||||||| | |||||||| ||| ||||||  ||||||||||||| ||||   |||||||||| |||||||||||||||||||||||    
T  11797715 gacacgacattgacacgggcacatcaacaccaataaaattttgaaaaaaaaatgacataatttaatgtaatcacaagtgtcggtgt 11797630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 29205458 - 29205533
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    ||||| ||||| |||||||||| |||||| |||||||||||||| |||||||| || |||| ||||| ||||||||    
T  29205458 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 8423763 - 8423685
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||| |||||||||| |||||| | || |||||||||||||||||| |  |||| ||||| |||||||||||    
T  8423763 tttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacacgcct 8423685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 10634997 - 10635120
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaa------------gtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttc 130  Q
    |||||||||||| |||||||||||||||||||| |||||||            || |||||||| |||| ||||||||||||||||  |||||   ||||    
T  10634997 ataaaattttgaaaaaatgacataattcaatgttatcacaaaatatcgatgttgtctcggtgtcagacatgatacgtgtcggacacccggacaactcttc 10635096  T
Q  131 aatcagaagtgttcgtgcaacaga 154  Q
    ||||||||| ||||||||||||||    
T  10635097 aatcagaagagttcgtgcaacaga 10635120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 21945517 - 21945583
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||| || || |||| |||||    
T  21945517 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacac 21945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 28964293 - 28964215
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| |||||| ||||||||| ||||||||||||| || | || ||||| |||||||||||    
T  28964293 tttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcct 28964215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 16073421 - 16073474
Alignment:
Q  63 cataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||||||| |||||| |||||||||||||||||||||||||| |||| |||||    
T  16073421 cataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacac 16073474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 22799951 - 22799893
Alignment:
Q  35 caacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  22799951 caacaagaataa--tttttagaaaatgacataattcaatgtaatcacacgtgtcagtgtcg 22799893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 5998835 - 5998934
Alignment:
Q  54 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacag 153  Q
    ||||||| ||||||||||||| ||||| |||||||  |||| |||||   |||||||||||||  |||||| |||||||||| ||||||  |||||||||    
T  5998835 agaaaataacataattcaatgcaatcataagtgtca-tgtcagacacatcacgtgtcggacacctggacacaccttcaatcataagtgtcggtgcaacag 5998933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 16303350 - 16303266
Alignment:
Q  11 gacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||| ||||| |||||| | ||||  |||| ||||||| ||||||| |||||| | |||||| ||||||||||||||||    
T  16303350 gacacgatacggacactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtcg 16303266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 54580068 - 54580008
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 110  Q
    ||||| ||||| |||||||||| |||||| | ||||||||||||||||||||| |||||||    
T  54580068 tttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtc 54580008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 10164904 - 10164861
Alignment:
Q  45 aaaattttgagaaaatgacataattcaatgtaatcacaagtgtc 88  Q
    ||||| |||| |||||||||||||||||||||||||||||||||    
T  10164904 aaaatcttgaaaaaatgacataattcaatgtaatcacaagtgtc 10164861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 34306826 - 34306771
Alignment:
Q  73 tgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||| | |||||||||    
T  34306826 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcct 34306771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 39619092 - 39619045
Alignment:
Q  105 cgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaaca 152  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  39619092 cgtgtcggacaccgggacacaccttcaatcagaagtgtccgtgcaaca 39619045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 683066 - 683115
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  683066 tttgagaaaatgacataattgaatgtaatcacatgtgtc-gtgtcggacac 683115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 28663499 - 28663533
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaa 77  Q
    |||||||||||||||||||||||||||||||||||    
T  28663499 ataaaattttgagaaaatgacataattcaatgtaa 28663533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 40224541 - 40224468
Alignment:
Q  52 tgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    |||||||||||||||||| |||||||||| | |||||||||| ||||| |||| || || ||||  ||||||||    
T  40224541 tgagaaaatgacataatttaatgtaatcatatgtgtcggtgttggacatgatatgtttccgacattgggacacg 40224468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 42640549 - 42640594
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||    
T  42640549 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 42640594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 24613746 - 24613702
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||    
T  24613746 tttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtc 24613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 715646 - 715572
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtc--ggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| |||||||||| |||||| |||||||| ||||||  | |||||| || |||| |||||||||||||||||    
T  715646 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcct 715572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 752972 - 752898
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtc--ggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| |||||||||| |||||| |||||||| ||||||  | |||||| || |||| |||||||||||||||||    
T  752972 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcct 752898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 18513286 - 18513243
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||    
T  18513286 tttgagaaaatgacataattcaatgtaatcatatgtgtcagtgt 18513243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 21345606 - 21345523
Alignment:
Q  22 gacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatac 105  Q
    |||||| |||||||||||  ||||| | ||||| ||||| |||||| ||||||||||||    |||||||||| ||||||||||    
T  21345606 gacacgcacacgtcaacaccaataataatttgaaaaaataacataactcaatgtaatcatttatgtcggtgtcagacacgatac 21345523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 30298967 - 30299006
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  30298967 aaaatgacataattcagtgtaattacaagtgtcggtgtcg 30299006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 30327835 - 30327874
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  30327835 aaaatgacataattcagtgtaattacaagtgtcggtgtcg 30327874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 34589751 - 34589682
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatca---caagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    |||||||||||||||||||||||||||||||      ||||| |||||||||||||||||| || |||||    
T  34589751 tttgagaaaatgacataattcaatgtaatcatgtgtcgtgtcagtgtcggacacgatacgtatctgacac 34589682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 56049897 - 56049956
Alignment:
Q  57 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    |||||||||| ||||||||||||| | ||||||||||| |||| ||||||| || |||||    
T  56049897 aaatgacatagttcaatgtaatcatatgtgtcggtgtcagacatgatacgtatccgacac 56049956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 2362020 - 2361954
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||| ||||| |||||||| | |||||| | |||||||||||||||||||||  |||||| |||||    
T  2362020 tttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcggacacgactcgtgtctgacac 2361954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 80
Target Start/End: Complemental strand, 5654636 - 5654606
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatca 80  Q
    |||||||||||||||||||||||||||||||    
T  5654636 tttgagaaaatgacataattcaatgtaatca 5654606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 9298943 - 9299017
Alignment:
Q  46 aaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac-gatacgtgtcggacacagg 119  Q
    ||||||| |||||||||||||||||||||| ||||||  ||| ||| ||| |||| || || |||||||||||||    
T  9298943 aaattttaagaaaatgacataattcaatgtcatcacacatgtaggtatcgaacactgacacatgtcggacacagg 9299017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 9988744 - 9988706
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtc 88  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  9988744 tttgagaaaatgacataattgaatgtaatcacatgtgtc 9988706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 80
Target Start/End: Original strand, 10546162 - 10546192
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatca 80  Q
    |||||||||||||||||||||||||||||||    
T  10546162 tttgagaaaatgacataattcaatgtaatca 10546192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 27624142 - 27624092
Alignment:
Q  45 aaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||| |||| || |||||||||| |||||||| ||||||||||||    
T  27624142 aaaattttgataaaaggatataattcaatctaatcacatgtgtcggtgtcg 27624092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 33950150 - 33950200
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||||| |||||||| |||||||||| | ||||||||||| |||||    
T  33950150 tttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtcagacac 33950200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 5414172 - 5414127
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    ||||| ||||||||||||| ||||||| ||||||||||||| ||||    
T  5414172 gtgtcagtgtcggacacgacacgtgtctgacacagggacacacctt 5414127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 6879504 - 6879459
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||| |||||||| | |||||| ||||||||||||||||||||||    
T  6879504 aaaatcacataattaagtgtaattacaagtgtcggtgtcggacacg 6879459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 12895161 - 12895116
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||| ||||||||||| ||||| ||||||||||||||||    
T  12895161 tttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcg 12895116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 35062452 - 35062520
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcgg 112  Q
    |||||||||||| ||||| | ||||||||||||||||| |||||| ||||||  |||||| || ||||||    
T  35062452 ataaaattttga-aaaataatataattcaatgtaatcataagtgttggtgtctaacacgacacatgtcgg 35062520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 47492399 - 47492436
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  47492399 aaaatgacataatttaatgtaatcacaagtgtcagtgt 47492436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 847965 - 848009
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||||||||| |||||||||| | |||| |||||||||||||||    
T  847965 tttgagaaaattacataattcactataattacaagtgtcggtgtc 848009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 4157169 - 4157229
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||| |||||||| | || ||| ||||||||||||||||||||||| || |||| |||||    
T  4157169 aaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacac 4157229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 4157456 - 4157516
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||| |||||||| | || ||| ||||||||||||||||||||||| || |||| |||||    
T  4157456 aaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacac 4157516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 8457939 - 8457971
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcaca 82  Q
    |||||||||||||||||||| ||||||||||||    
T  8457939 tttgagaaaatgacataattgaatgtaatcaca 8457971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 13484078 - 13484126
Alignment:
Q  106 gtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 154  Q
    ||||||||||| || ||| || |||||||||||||||| ||||||||||    
T  13484078 gtgtcggacactggaacatgcattcaatcagaagtgttggtgcaacaga 13484126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 14465339 - 14465299
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcgg 90  Q
    |||||||||||||||||||||||| |||||| | |||||||    
T  14465339 tttgagaaaatgacataattcaatttaatcatatgtgtcgg 14465299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 26276054 - 26276026
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaat 78  Q
    |||||||||||||||||||||||||||||    
T  26276054 tttgagaaaatgacataattcaatgtaat 26276026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 30982878 - 30982834
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||| ||||||| ||||||| ||||| |||||||||||    
T  30982878 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcct 30982834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 1334630 - 1334774
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgata 104  Q
    ||||| ||||||| |||||||| ||||| |  ||| | |||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||     
T  1334630 acaccggacacgacactgacacagacacattgacacggataaaattttgaaaaaaggacataattcaatgtaatcacaaatgtcggtgtcgaacacgatg 1334729  T
Q  105 cgtgtcggacacagggacacgccttcaatcagaagtgttcgtgca 149  Q
    ||||||| ||||  |||||| ||||||||||||||||| ||||||    
T  1334730 cgtgtcgaacaccaggacacaccttcaatcagaagtgtccgtgca 1334774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 26402772 - 26402624
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaa--tgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||| |||| || |||||||| ||||  || ||||  |||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  26402772 acaccggacatgacactgacacagacagatcgacaatgataaaattttgaaaaaaaatgacataattcagtgtaatcacaagtgtcggtgtcggacacga 26402673  T
Q  103 tacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaac 151  Q
    ||| ||| |||||| | |||||  |||||||||||||||| ||||||||    
T  26402672 tacatgttggacaccgagacacttcttcaatcagaagtgtccgtgcaac 26402624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 6751934 - 6751878
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6751934 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 6751878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 19369805 - 19369923
Alignment:
Q  24 cacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggaca 123  Q
    |||||||||||  ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||           |||||| ||||| | ||||    
T  19369805 cacggacacgttgacacggataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt-----------cgtgtc-gacaccgagaca 19369892  T
Q  124 cgccttcaatcagaagtgttcgtgcaacaga 154  Q
    ||||||||||||||||||| |||||||||||    
T  19369893 cgccttcaatcagaagtgtccgtgcaacaga 19369923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 32225442 - 32225331
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgt 142  Q
    |||||||||||||||||| || | | |||||||||||||| |||||||||||||||||||  | ||||||||||  |||||| ||||||||||| |||||    
T  32225442 ataaaattttgagaaaataacgtgagtcaatgtaatcacaggtgtcggtgtcggacacgacccctgtcggacacctggacacaccttcaatcaggagtgt 32225343  T
Q  143 tcgtgcaacaga 154  Q
    | ||||| ||||    
T  32225342 ttgtgcagcaga 32225331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 28715309 - 28715387
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||  ||||| |||||||||||    
T  28715309 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcct 28715387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 141
Target Start/End: Original strand, 29959182 - 29959281
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtc-ggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtg 141  Q
    |||||||||||||||||||||||||||||||||||| || | || |  |||||||| |||||||||||||||||  |||||||  ||||||||| |||||    
T  29959182 ataaaattttgagaaaatgacataattcaatgtaatgactaatgacaagtgtcggatacgatacgtgtcggacagcgggacactacttcaatcaaaagtg 29959281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 34595148 - 34595222
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacac 124  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||| |||||||    
T  34595148 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacac 34595222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 10031577 - 10031621
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgt 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10031577 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgt 10031621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 28152118 - 28152190
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||| |||||| ||||    
T  28152118 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcct 28152190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 26178527 - 26178601
Alignment:
Q  80 acaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 154  Q
    |||||| |||||||||||||||| ||||||||||||  ||||||  ||||||||||||||||| |||||| ||||    
T  26178527 acaagtatcggtgtcggacacgacacgtgtcggacatcgggacataccttcaatcagaagtgtccgtgcatcaga 26178601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 22745964 - 22746016
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  22745964 ataaaattttgagaaaatgttatatttcaatgtaatcacaagtgtcggtgtcg 22746016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 5579632 - 5579707
Alignment:
Q  14 acgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcg 89  Q
    ||||| |||||||| | ||||| |||   |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  5579632 acgatgctgacacgaatacgtcgacaccgataaaattttgagaaaatgacatagttcaatgtagtcacaagtgtcg 5579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 785455 - 785385
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 154  Q
    |||||||||||| ||| |||  |||||||||||  |||||| ||||||||||||||||| |||||||||||    
T  785455 gtgtcggtgtcgaacatgatgtgtgtcggacaccaggacacaccttcaatcagaagtgtccgtgcaacaga 785385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 7377987 - 7378045
Alignment:
Q  44 taaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||| ||||||||||| ||||||||||||||||| | | |||||||||||||||||||    
T  7377987 taaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacga 7378045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 785492 - 785455
Alignment:
Q  58 aatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||||||||||||||||||||||||||||||    
T  785492 aatgacataattcaatgtaatcacaagtgtcggtgtcg 785455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 10157998 - 10158039
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggt 91  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  10157998 tttgagaaaatgacataattcaatgtaatcacatgtgtcggt 10158039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 9024248 - 9024176
Alignment:
Q  23 acacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||||| |||  ||| | | ||||||||||||||||||||||||||||||| | ||||| ||||||    
T  9024248 acacggacacgtcgacacaaatgataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcg 9024176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 16516948 - 16517004
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    |||||||||||||||||  | |||||||||||||||||| |||||||||||| ||||    
T  16516948 ataaaattttgagaaaactatataattcaatgtaatcactagtgtcggtgtccgaca 16517004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 426559 - 426508
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||| ||||| |||||||| |||||||| ||||||||||||||||||||||    
T  426559 tttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggacacg 426508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 13364750 - 13364675
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    ||||||||||| | |||||||| |||||||| | |||||||||| ||||||||||| |||| |||||  |||||||    
T  13364750 tttgagaaaatcatataattcagtgtaatcatatgtgtcggtgttggacacgatacatgtctgacaccaggacacg 13364675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 32978932 - 32978869
Alignment:
Q  62 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    |||||||| | |||||| ||||||||||||||||||||||| || |||| ||||| ||||||||    
T  32978932 acataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacg 32978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 7265638 - 7265572
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||||||||| |||||||||| |||||| | | ||||||||||||||||| |||| |||| |||||    
T  7265638 tttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaatacatgtccgacac 7265572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 7977875 - 7977825
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||| ||||| |||||||||| |||||| |||||||||||||||||||||    
T  7977875 tttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 17841634 - 17841556
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||| | |||||| ||||||| ||||||||||||||| | ||||| ||||| | |||||||||    
T  17841634 tttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggacacgacatgtgtccgacactgagacacgcct 17841556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 33001334 - 33001268
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||| ||||| |||||||| |||||||| | | ||||||||||||||||||| ||||||| |||||    
T  33001334 tttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 33001268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 31430277 - 31430326
Alignment:
Q  33 gtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcaca 82  Q
    |||||||  |||||||||||||||||||||||| ||| ||||||||||||    
T  31430277 gtcaacaccaataaaattttgagaaaatgacatgattaaatgtaatcaca 31430326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 4859158 - 4859114
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||    
T  4859158 tttgagaaaatgacataatccaatgtaatcacacgtgtcagtgtc 4859114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 7942269 - 7942373
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgt-----cggtgtcggacac-gatacgtgtcggacacagggacacgccttcaatcagaagtgtt 143  Q
    ||||||| ||||||||||||||||||||||||| ||||     | ||||||||||| || |||||||||||||   ||||| ||||  ||||||||||||    
T  7942269 tttgagacaatgacataattcaatgtaatcacatgtgtcagtgctgtgtcggacactgacacgtgtcggacaccacgacacaccttagatcagaagtgtt 7942368  T
Q  144 cgtgc 148  Q
     ||||    
T  7942369 ggtgc 7942373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 16503682 - 16503738
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    |||||||||||||||||  | |||||||||||||||||| ||||| |||||| ||||    
T  16503682 ataaaattttgagaaaactatataattcaatgtaatcactagtgttggtgtccgaca 16503738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 10335421 - 10335378
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    |||||||||||||||||||| |||||||||| | ||||||||||    
T  10335421 tttgagaaaatgacataattgaatgtaatcagatgtgtcggtgt 10335378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 853904 - 853826
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||| | || ||| |||||||||||||||||| |||| | ||||| |||| || |||||||||    
T  853904 tttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtcggatacgacatgtgtccgacatagagacacgcct 853826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 4877969 - 4878034
Alignment:
Q  62 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||||| | | |||| ||||||||||||||||||||||| || |||| |||||| ||||||||||    
T  4877969 acataattaagtataattacaagtgtcggtgtcggacacgacacatgtccgacaca-ggacacgcct 4878034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 9629397 - 9629443
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgg 96  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||    
T  9629397 tttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 9629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 17327655 - 17327617
Alignment:
Q  90 gtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  17327655 gtgtcggacacgacacgtgtctgacacagggacacgcct 17327617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 31327806 - 31327868
Alignment:
Q  28 gacacgtcaacaagaataaaa-ttttgagaaaatgacataattcaatgtaatcacaagtgtcg 89  Q
    ||||||||||||  ||||||| |||| ||||||| |||||||| |||| ||||||||||||||    
T  31327806 gacacgtcaacatcaataaaaattttaagaaaattacataatttaatgcaatcacaagtgtcg 31327868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 34057972 - 34058018
Alignment:
Q  54 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||||||||| | |||||||||| ||||||||||| |||||    
T  34057972 agaaaatgacataattgactgtaatcacatgtgtcggtgtcagacac 34058018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 34197112 - 34197170
Alignment:
Q  37 acaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||| ||||||||||| ||||| ||| |||||||| |||||| | ||||||||||||||    
T  34197112 acaacaataaaattttaagaaagtgatataattcagtgtaattataagtgtcggtgtcg 34197170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 5635940 - 5635903
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatca 80  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  5635940 ataaaattttaagaaaatgacataattcaatataatca 5635903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 6898319 - 6898274
Alignment:
Q  57 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    |||| |||||||| | |||||| |||||||||||||||||||||||    
T  6898319 aaattacataattaagtgtaattacaagtgtcggtgtcggacacga 6898274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 9617448 - 9617493
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||| ||||||||||||||||| | | ||||||||||||    
T  9617448 tttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 10770719 - 10770674
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  10770719 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 10770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 16388248 - 16388211
Alignment:
Q  64 ataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  16388248 ataattcagtgtaattacaagtgtcggtgtcggacacg 16388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 16488590 - 16488545
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    ||||||||||||||||||| ||||||| | ||| ||||||||||||    
T  16488590 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgcctt 16488545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 16766711 - 16766756
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  16766711 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 23771610 - 23771667
Alignment:
Q  68 ttcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    |||| |||||| |||| |||||||||||||||||| | ||||| ||||||| ||||||    
T  23771610 ttcagtgtaattacaaatgtcggtgtcggacacgacatgtgtccgacacagagacacg 23771667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 8365519 - 8365475
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||||| |||||||||| ||||||| ||||| |||||||||||    
T  8365519 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcct 8365475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 8777018 - 8776966
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||| ||||| ||| |||||| |||||| |||||||| ||||||||||||||    
T  8777018 tttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacga 8776966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 10339125 - 10339081
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||||||||||| || |||| ||||| |||||||||||    
T  10339125 gtgtcggtgtcggacacgacacatgtccgacactgggacacgcct 10339081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 14514794 - 14514834
Alignment:
Q  42 aataaaattttgagaaaatgacataattcaatgtaatcaca 82  Q
    ||||||||||| | ||||||| |||||||||||||||||||    
T  14514794 aataaaattttaaaaaaatgatataattcaatgtaatcaca 14514834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 15489777 - 15489733
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||| ||||| ||| ||||||||||||| |||||||||||||||    
T  15489777 tttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 16766756 - 16766800
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||||||||| | ||||||| ||||| |||||||||||    
T  16766756 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcct 16766800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 19040366 - 19040418
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||||||||| |||||||||| |||||| | | ||||| |||||||||||||    
T  19040366 tttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacga 19040418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 24645501 - 24645561
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||| |||||||||| | || | ||||||||||||||| ||||||| ||||||| |||||    
T  24645501 aaaatcacataattcagtatagttacaagtgtcggtgtcagacacgacacgtgtccgacac 24645561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 30851630 - 30851674
Alignment:
Q  66 aattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 110  Q
    ||||||||||||| | | ||||||||||||||||||| |||||||    
T  30851630 aattcaatgtaattatatgtgtcggtgtcggacacgacacgtgtc 30851674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 34868209 - 34868157
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||||||| |||  ||||||||||||||||||||  | |||||||||    
T  34868209 ataaaattttgagagaatatcataattcaatgtaatcacatttctcggtgtcg 34868157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 26915321 - 26915201
Alignment:
Q  14 acgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagt-----gtcggtgtcggacacgatacgtg 108  Q
    |||| ||||||||||||||||| ||| | ||||||||||||||||||||||||||| |||||||||||||||     |||||||||||||||||||||||    
T  26915321 acgacactgacacggacacgtcgacacggataaaattttgagaaaatgacataatttaatgtaatcacaagtgtcgtgtcggtgtcggacacgatacgtg 26915222  T
Q  109 tcggacacagggacacgcctt 129  Q
    || ||||  ||||||||||||    
T  26915221 tcagacattgggacacgcctt 26915201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 42874497 - 42874620
Alignment:
Q  11 gacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 110  Q
    ||||||| ||| ||||||||||||| |||    ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||| | || ||||    
T  42874497 gacacgacactaacacggacacgtcgacaccgttaacattttgagaaaatgacataattcaatgtaatcacaagtgtcagtgttggacacaacacatgtc 42874596  T
Q  111 ggacacagggacacgccttcaatc 134  Q
    |||||  | |||||||||||||||    
T  42874597 ggacatcgagacacgccttcaatc 42874620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 34074030 - 34073922
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgt 142  Q
    |||||||||||| |||||||||||||| |||||||||| |||||||| | || ||||||  |||||||| |||    |||||||||||||||| ||||||    
T  34074030 ataaaattttgaaaaaatgacataatttaatgtaatcataagtgtcgatatcagacacgtcacgtgtcgcacatcatgacacgccttcaatcaaaagtgt 34073931  T
Q  143 tcgtgcaac 151  Q
    | |||||||    
T  34073930 ttgtgcaac 34073922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 10497892 - 10497746
Alignment:
Q  19 actgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtc-----------ggtgtcggacacgatacgt 107  Q
    |||||||| |||||| | ||| | |||||||||||||||||| ||||||||  |||||||||||||||||           ||||||| |||  |||| |    
T  10497892 actgacacagacacgccgacacggataaaattttgagaaaataacataatttgatgtaatcacaagtgtcagtatcgtgtcggtgtcgaacataatacat 10497793  T
Q  108 gtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 154  Q
    |||  |||| |||||||||||||||||||| ||||||||||||||||    
T  10497792 gtcaaacaccgggacacgccttcaatcagaggtgttcgtgcaacaga 10497746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 27733854 - 27733905
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  27733854 ataaaattttgagaaaatgatataattcaatgtaatcacaagtgttggtgtc 27733905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 31119097 - 31119140
Alignment:
Q  46 aaattttgagaaaatgacataattcaatgtaatcacaagtgtcg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31119097 aaattttgagaaaatgacataattcaatgtaatcacaagtgtcg 31119140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 40332205 - 40332283
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||| |||||||||| |||||| |||||||||||||| |||||||| |||||||  |||| ||||| |||||    
T  40332205 tttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcct 40332283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 20873083 - 20873143
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 110  Q
    ||||| ||||| |||||||| | |||||| |||||||||||||||||||||||||||||||    
T  20873083 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtc 20873143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 24295189 - 24295138
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  24295189 ataaaattgtgagaaaatgacacaatttaatgtaatcacaagtgtcggtgtc 24295138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 22600497 - 22600579
Alignment:
Q  5 acaccagacacgatact-gacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtg 86  Q
    ||||||||||||| ||  ||||| ||||| ||||||  ||||||||||  |||||||||||||||||||| ||||||||||||    
T  22600497 acaccagacacgacacacgacactgacacatcaacaccaataaaatttaaagaaaatgacataattcaatataatcacaagtg 22600579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 1639487 - 1639532
Alignment:
Q  33 gtcaacaagaataaaattttgagaaaatgacataattcaatgtaat 78  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||    
T  1639487 gtcaacaataataatattttgagaaaatgacataattcaatgtaat 1639532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 4948666 - 4948718
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||| ||||| |||||||||| |||||| |||||||||||||||||||||||    
T  4948666 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 5813636 - 5813684
Alignment:
Q  80 acaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||||||||||||||| ||||||| ||||| |||||||||||    
T  5813636 acaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcct 5813684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 26434194 - 26434254
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 110  Q
    ||||||||||| |||||||||||| |||| | |||||||||||| |||||| |||||||||    
T  26434194 tttgagaaaatcacataattcaatataattaaaagtgtcggtgttggacacaatacgtgtc 26434254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 31548338 - 31548294
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||    
T  31548338 tttgataaaatgacataattcaatgtaatcacatgtgtcggtgtc 31548294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 3025565 - 3025640
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    ||||||||||| |||||||||| |||||| | | ||||| ||||||||||||| ||||||| ||||| | ||||||    
T  3025565 tttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgtctgacactgtgacacg 3025640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 3954431 - 3954376
Alignment:
Q  44 taaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    |||||||||||||||||||| || |||||| |||||||| ||||| ||||||||||    
T  3954431 taaaattttgagaaaatgacgtatttcaatttaatcacatgtgtccgtgtcggaca 3954376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 18170533 - 18170478
Alignment:
Q  44 taaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    ||||| ||||| ||||| ||||||||||||||||| |||| |||||||||||||||    
T  18170533 taaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcggaca 18170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 18634101 - 18634046
Alignment:
Q  44 taaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    ||||| ||||| ||||| ||||||||||||||||| |||| |||||||||||||||    
T  18634101 taaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcggaca 18634046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 20679440 - 20679361
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    ||||||||||| ||||| |||| |||||| | ||||||||||||| ||| | | ||||||| ||||| ||||||||||||    
T  20679440 tttgagaaaatcacatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgcctt 20679361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 1433359 - 1433409
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||||||||||||| ||||||||| ||| | |||||||||||||||    
T  1433359 tttgagaaaatgacataatccaatgtaataacatgcgtcggtgtcggacac 1433409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 12985406 - 12985456
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||||| ||||||||||||||||||| |  ||||||||||||||||    
T  12985406 tttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcggacac 12985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 14134685 - 14134791
Alignment:
Q  22 gacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacaggga 121  Q
    |||||||||||||| |||| | ||| | ||||||||||| |||||||||| |||||| | |  ||||||||||  |||||| ||||||| | |||  |||    
T  14134685 gacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtcaaacacgacacgtgtccgtcaccagga 14134784  T
Q  122 cacgcct 128  Q
    |||||||    
T  14134785 cacgcct 14134791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 36450799 - 36450721
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| ||| |||||| |||||| |||||||| ||||||||||||||  |||||| |||||  ||||||||||    
T  36450799 tttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgcct 36450721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 31236622 - 31236569
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgat 103  Q
    ||||||||||| ||||||||||||||||| | | ||||||||| ||||||||||    
T  31236622 tttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacacgat 31236569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 34451032 - 34450987
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  34451032 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctt 34450987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 44462234 - 44462165
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    |||| |||| |||||||| |||||| | ||||||||||| |||||||||| |||| ||||| ||||||||    
T  44462234 aaaaagacacaattcaatttaatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacg 44462165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 44469767 - 44469698
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    |||| |||| |||||||| |||||| | ||||||||||| |||||||||| |||| ||||| ||||||||    
T  44469767 aaaaagacacaattcaatttaatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacg 44469698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 5307048 - 5307119
Alignment:
Q  23 acacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||||| |||   |||| | ||||| ||||||||||||||||||| ||||| ||||||||||||||    
T  5307048 acacggacacgtcgacactgataataatttga-aaaatgacataattcaatgaaatcataagtgtcggtgtcg 5307119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 6960728 - 6960692
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatc 79  Q
    ||||||||||||||||||||||||||| |||||||||    
T  6960728 ataaaattttgagaaaatgacataatttaatgtaatc 6960692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 29447155 - 29447111
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||    
T  29447155 tttgagaaaatcacataattcaatgtaactacaagtgtcggtgtc 29447111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 10002202 - 10002163
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  10002202 aaaatgacataatttaatgtaatcacatgtgtcggtgtcg 10002163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 11246131 - 11246084
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcgg 90  Q
    |||||||||||||||||| ||||||| |||||||||  ||||||||||    
T  11246131 ataaaattttgagaaaataacataatgcaatgtaatttcaagtgtcgg 11246084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 24413607 - 24413544
Alignment:
Q  47 aattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 110  Q
    |||||||||||||  ||||||||||  ||||| | ||||||| |||||||||||||| ||||||    
T  24413607 aattttgagaaaaatacataattcagggtaattataagtgtcagtgtcggacacgatgcgtgtc 24413544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 926878 - 926760
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgata 104  Q
    ||||| ||||||| || ||||| |||||| |||||    ||| | |||||||||||  |||  |||| |||||| | ||||||||||||||||| ||| |    
T  926878 acaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgtcggacgcgaca 926779  T
Q  105 cgtgtcggacacagggaca 123  Q
    |||||| ||||| ||||||    
T  926778 cgtgtccgacaccgggaca 926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 2652346 - 2652391
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcg 89  Q
    ||||| |||| |||||||||||||||| |||||||||||||||||||    
T  2652346 ataaattttttagaaaatgacataatt-aatgtaatcacaagtgtcg 2652391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 80
Target Start/End: Complemental strand, 29198524 - 29198494
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatca 80  Q
    |||||||||||||||||||||||||||||||    
T  29198524 tttgagaaaatgacataattcaatgtaatca 29198494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 77
Target Start/End: Original strand, 1591311 - 1591340
Alignment:
Q  48 attttgagaaaatgacataattcaatgtaa 77  Q
    ||||||||||||||||||||||||||||||    
T  1591311 attttgagaaaatgacataattcaatgtaa 1591340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 14227214 - 14227263
Alignment:
Q  28 gacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaa 77  Q
    ||||||||||||  ||||| | ||||||||||| ||||||||||||||||    
T  14227214 gacacgtcaacaccaataataatttgagaaaataacataattcaatgtaa 14227263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 20658562 - 20658475
Alignment:
Q  49 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagt 140  Q
    ||||||||||||||||| |||| |||| |||||| | ||| ||||   ||| || |||||| |||||  |||||||||||||||||||||||    
T  20658562 ttttgagaaaatgacatgattcgatgtgatcacaggagtctgtgt---acaggacacgtgttggacat-gggacacgccttcaatcagaagt 20658475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 22651990 - 22652035
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||| |||||||||||| |||| ||||||||||||||||    
T  22651990 tttgaaaaaatcacataattcaatataattacaagtgtcggtgtcg 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 24613540 - 24613585
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||| |||||||| | |||||| ||||||||||||||||||||||    
T  24613540 aaaatcacataattaagtgtaattacaagtgtcggtgtcggacacg 24613585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 24669447 - 24669492
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||| |||| |||||||||| |||||| ||||||||||||||||    
T  24669447 tttgaggaaattacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 25566855 - 25566900
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  25566855 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 25566900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 31681871 - 31681830
Alignment:
Q  54 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||||||||| |||| ||||||| ||||||||||||    
T  31681871 agaaaatgacataattgaatgaaatcacatgtgtcggtgtcg 31681830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 4298931 - 4298887
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||| ||||| |||||||| |||||||| |||||||||||||||    
T  4298931 tttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 78
Target Start/End: Original strand, 10441217 - 10441245
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaat 78  Q
    |||||||||||||||||||||||||||||    
T  10441217 tttgagaaaatgacataattcaatgtaat 10441245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 16230165 - 16230105
Alignment:
Q  21 tgacacggacacgtc-aacaagaataaaattttgagaaaatgacataattcaatgtaatca 80  Q
    ||||||||||||||| ||||| ||||| | ||| |||||||||||||||| ||| ||||||    
T  16230165 tgacacggacacgtctaacaacaataataattttagaaaatgacataatttaatataatca 16230105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 31586322 - 31586278
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||||||||||| |||||  |||||||||||| |||||||||||    
T  31586322 tttgagaaaatgatataatataatgtaatcacacgtgtcggtgtc 31586278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 34201091 - 34201063
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaat 78  Q
    |||||||||||||||||||||||||||||    
T  34201091 tttgagaaaatgacataattcaatgtaat 34201063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 44067485 - 44067569
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcg 89  Q
    ||||||||||| | || ||||| |||||| | ||| | |||| | ||||||||||||||||||| || |||||| | ||||||||    
T  44067485 acaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 44067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 9e-27; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 57 - 154
Target Start/End: Complemental strand, 34834965 - 34834869
Alignment:
Q  57 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 154  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||    
T  34834965 aaatgacataattcaat-taatcacgagtatcggtgtcggacttgatacatgtcggacaccgggacacgccttcaatcagaagtgtccgtgcaacaga 34834869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 14338535 - 14338454
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacac 124  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||| |||| |||||||| |||||||    
T  14338535 ataaaattttgaaaaaatgacataattcaatgtaatcacaaatgtcggtgtcagacacgacacgtatcggacaccgggacac 14338454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 10954966 - 10955044
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||    
T  10954966 tttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcct 10955044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 20503479 - 20503557
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| |||||||||||||||| |||||| |||||||||||||| |||||||| || |||| ||||| |||||||||||    
T  20503479 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcct 20503557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 6984770 - 6984865
Alignment:
Q  42 aataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaa 138  Q
    ||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||||||| | | ||||  ||||| |||| ||| ||||||||||||    
T  6984770 aataaaattttgagaaaataacacaattcaatataatcacaagagtcggtgtcggacacaacaagtgt-agacacggggatacgacttcaatcagaa 6984865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 49179767 - 49179715
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  49179767 ataaaattttgagaaagtgacataattcgatgtaatcacaagtgtcggtgtcg 49179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 35222950 - 35223028
Alignment:
Q  48 attttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgc 126  Q
    ||||| ||||||| ||||||||||||||||| | | |||||||||||||||| || ||||||| ||||| |||||||||    
T  35222950 atttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgc 35223028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 55401089 - 55401167
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||| | |||||| ||||||||||||||||||||||| ||||||| ||||| | |||||||||    
T  55401089 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcct 55401167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 28918015 - 28918095
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc--ggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| |||||| |||||||||||||||  |||||||| ||||||| ||||| |||||||||||    
T  28918015 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcct 28918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 23272039 - 23271982
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgt 107  Q
    ||||||||| |||||||||| |||||||||| | |||||||||| |||||||||||||    
T  23272039 tttgagaaactgacataattgaatgtaatcatatgtgtcggtgttggacacgatacgt 23271982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 44427855 - 44427900
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  44427855 tttgagaaaatgacataatccaatgtaatcacatgtgtcggtgtcg 44427900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 40993374 - 40993302
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| |||||||||| |||||| | | ||||||||||||||||||| || |||| ||||| |||||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcct 40993302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 20691333 - 20691383
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||| |||||    
T  20691333 tttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtcagacac 20691383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 27858354 - 27858404
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||||||| ||||| |||||||||||| | |||||||||||||||    
T  27858354 tttgagaaaatgacctaattgaatgtaatcacaggcgtcggtgtcggacac 27858404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 13845576 - 13845491
Alignment:
Q  44 taaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    |||| |||| ||||||| ||| ||| || |||||| | | ||||||||||||||||||| ||||||| ||||| | ||||||||||    
T  13845576 taaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgagacgtgtctgacacggagacacgcctt 13845491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 40150616 - 40150567
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    ||||||||||||| ||||||||||||||||| | ||||||||||| ||||    
T  40150616 tttgagaaaatgatataattcaatgtaatcatatgtgtcggtgtctgaca 40150567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 7171529 - 7171593
Alignment:
Q  64 ataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||||  |||||| |||||||| |||||||||||||| ||||||| ||||| | |||||||||    
T  7171529 ataattcggtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcct 7171593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 15864252 - 15864304
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||||||||||||||||||||||| ||||||  ||||| |||||||    
T  15864252 ataaagttttgagaaaatgacataattcaatataatcattagtgttggtgtcg 15864304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 24205131 - 24205008
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac-gat 103  Q
    ||||| ||||||| || ||||| |||||| | ||| | |||| | ||||||||||||||||||| || |||||| | ||||||| ||||||||||| ||     
T  24205131 acaccggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtc-gtgtcggacactgac 24205033  T
Q  104 acgtgtcggacacagggacacgcct 128  Q
     |||||| |||||  ||||||||||    
T  24205032 gcgtgtccgacaccaggacacgcct 24205008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 41319383 - 41319327
Alignment:
Q  22 gacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaat 78  Q
    |||||||||||||| |||  ||||| | ||||| |||||||||||||||||||||||    
T  41319383 gacacggacacgtcgacaccaataataatttgaaaaaatgacataattcaatgtaat 41319327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 8383271 - 8383322
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||||||||| | |||||||| |||||| | ||||||||||||||||||||    
T  8383271 tttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 25775535 - 25775574
Alignment:
Q  62 acataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  25775535 acataattcagtgtaattacaagtgtcggtgtcggacacg 25775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 42076801 - 42076751
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    |||||||| || ||||||||| ||||||||||||||||||||| ||||||||    
T  42076801 ataaaattgtgggaaaatgacctaattcaatgtaatcacaagt-tcggtgtc 42076751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 52558180 - 52558141
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcaca 82  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  52558180 ataaaaatttgagaaaaggacataattcaatgtaatcaca 52558141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 1502592 - 1502638
Alignment:
Q  54 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||    
T  1502592 agaaaatgacataattgaatgtaatcacatgtgtctgtgttggacac 1502638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 9210870 - 9210832
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtc 88  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  9210870 tttgagaaaatgacataattcaatggaatcacatgtgtc 9210832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 21149081 - 21149131
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||||||||||||||| |||||||| |  ||||| ||||||||||    
T  21149081 tttgagaaaatgacataattcagtgtaatcaaagatgtcgttgtcggacac 21149131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 34409409 - 34409355
Alignment:
Q  28 gacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcaca 82  Q
    ||||||||||||   |||| | || ||||||||||||||||||||||||||||||    
T  34409409 gacacgtcaacaccgataatacttcgagaaaatgacataattcaatgtaatcaca 34409355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 51206398 - 51206348
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||| ||||| |||||||||| |||||  |||||||||||||||||||||    
T  51206398 tttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggacac 51206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 4991012 - 4990967
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||| |||||||||| |||||| ||||||||||| ||||    
T  4991012 tttgagaaaattacataattcagtgtaattacaagtgtcggcgtcg 4990967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 8587066 - 8587017
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    ||||| ||||| |||||||| | |||||| ||||||||||||||||||||    
T  8587066 tttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcggaca 8587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 8789595 - 8789515
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg--atacgtgtcggacacagggacacgcct 128  Q
    ||||||||||| |||||||||  |||||| | | ||||||||||||||||||  | || |||||||||| | |||||||||    
T  8789595 tttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcct 8789515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 16000055 - 16000010
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||| |||||||||| |||||  ||||||||||||||||||||||    
T  16000055 aaaataacataattcagtgtaactacaagtgtcggtgtcggacacg 16000010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 25652123 - 25652050
Alignment:
Q  3 gaacaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgta 76  Q
    ||||||||||||||| || |||||  ||||| ||||| | |||| | ||||||||||||| |||||||| ||||    
T  25652123 gaacaccagacacgacacggacactaacacgccaacacggataataatttgagaaaatgatataattcagtgta 25652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 49651831 - 49651786
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  49651831 tttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcg 49651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 3865700 - 3865748
Alignment:
Q  62 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 110  Q
    |||||||||| | |||| ||||||||||||||| ||||||| |||||||    
T  3865700 acataattcagtataattacaagtgtcggtgtctgacacgacacgtgtc 3865748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 4946251 - 4946199
Alignment:
Q  48 attttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||| ||||||||| |||||| |||||||||||| ||||| |||| ||||||    
T  4946251 attttaagaaaatgatataattgaatgtaatcacatgtgtctgtgttggacac 4946199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 4987291 - 4987247
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||||||| |||||||| ||||||| ||||| |||||||||||    
T  4987291 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcct 4987247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 8593148 - 8593200
Alignment:
Q  47 aattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    ||||| || ||||| |||||||||| | |||| ||||||||||||||||||||    
T  8593148 aatttggaaaaaatcacataattcagtataattacaagtgtcggtgtcggaca 8593200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 14832158 - 14832202
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||||| |||||||||| ||||||| ||||| |||||||||||    
T  14832158 gtgtcggtatcggacacgacacgtgtccgacaccgggacacgcct 14832202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 18268095 - 18268007
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    ||||| || |||||||||| || |||| |||||||   |||| | |||||||||||||  ||||| || ||||||||| ||||||||||    
T  18268095 acaccggatacgatactgaaactgacatgtcaacactgataataatttgagaaaatgaattaattgaacgtaatcacatgtgtcggtgt 18268007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 40017414 - 40017386
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaat 78  Q
    |||||||||||||||||||||||||||||    
T  40017414 tttgagaaaatgacataattcaatgtaat 40017386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 40697901 - 40697857
Alignment:
Q  52 tgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgg 96  Q
    |||||||||||||||||||||| ||| || | |||||||||||||    
T  40697901 tgagaaaatgacataattcaatctaaccatatgtgtcggtgtcgg 40697857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 41961650 - 41961606
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||||| |||||||||| ||||||| ||||| |||||||||||    
T  41961650 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcct 41961606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 54690376 - 54690304
Alignment:
Q  82 aagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 154  Q
    ||||||||||||||||||| | || ||| | |||| ||||| ||||||| |||| |||| || ||||||||||    
T  54690376 aagtgtcggtgtcggacacaacacatgttgcacactgggacgcgccttcgatcaaaagttttggtgcaacaga 54690304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 8955 - 9061
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgt 142  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  |     |  ||||||||||| |||||||||||||||||||||||||    
T  8955 ataaaattttgagaaaatgacataattcaacgtaatcacaagtgtcggtgtc--atgtcgtgtgtgtcggacaccgggacacgccttcaatcagaagtgt 9052  T
Q  143 tcgtgcaac 151  Q
      |||||||    
T  9053 ctgtgcaac 9061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 30080591 - 30080503
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    ||||||||||||| | ||||||||| | ||| |||   ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30080591 acaccagacacgacaatgacacggaaatgtcgacactgataaaattttgagaaaatgacataattcaatgtaatcacaagtatcggtgt 30080503  T

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Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 19167667 - 19167571
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaa-tgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||||||| |||||||| |||||||  |||   |||||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||    
T  19167667 acaccagacacgacactgacacagacacgttgacaccgataaaattttgaaaaaaatgacacaattcaatgtaatcacaagtgtcggtgtcagacac 19167571  T

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Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 10010543 - 10010617
Alignment:
Q  25 acggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    |||||||| ||||||  ||||||||||||| |||||||||||||||| |||||||||| |||||||||| |||||    
T  10010543 acggacacctcaacactaataaaattttgaaaaaatgacataattcattgtaatcacatgtgtcggtgtgggaca 10010617  T

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Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 21576790 - 21576712
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| |||||| |||||||||| |||||||||||| ||||||| ||||| |||||||||||    
T  21576790 tttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcct 21576712  T

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Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 7621311 - 7621171
Alignment:
Q  19 actgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtg-----tcggacacgatacgtgtcgga 113  Q
    ||||||| ||||||||| |||   |||||||||  | ||| |||||||||| ||||||||||||||| ||||||     || |||||||||| | |||||    
T  7621311 actgacatggacacgtcgacacagataaaatttaaaaaaattgacataatttaatgtaatcacaagtatcggtgtcatatcagacacgatacttatcgga 7621212  T
Q  114 cacagggacacgccttcaatcagaagtgttcgtgcaacaga 154  Q
    ||   ||||||| |||||||||||||||| |||||||||||    
T  7621211 catcaggacacgtcttcaatcagaagtgtccgtgcaacaga 7621171  T

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Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 21191101 - 21191023
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||||||| | ||||||| ||| | |||||||||||    
T  21191101 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgactccgggacacgcct 21191023  T

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Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 27932249 - 27932327
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||| |||||||||| |||||| |||| | | |||||||||||||| |||||||||||||  ||||||||||    
T  27932249 tttgagaaaattacataattcagtgtaattacaaatcttggtgtcggacacgacacgtgtcggacaccaggacacgcct 27932327  T

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Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 16207641 - 16207586
Alignment:
Q  45 aaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||| |||||| |||||||||||||||||||||||||||| |||||| |||||    
T  16207641 aaaatttagagaaattgacataattcaatgtaatcacaagtgttggtgtcagacac 16207586  T

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Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 21319997 - 21319946
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||| ||||    
T  21319997 ataaaattttgaaaaaatgatataattcaatgtaatcacaagtgtcgatgtc 21319946  T

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Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 11084325 - 11084395
Alignment:
Q  62 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaa 132  Q
    ||||||||||| ||| |||| ||||||||||| |||||||| || ||||| |||| |||||||||||||||    
T  11084325 acataattcaacgtagtcactagtgtcggtgttggacacgacacatgtcgaacaccgggacacgccttcaa 11084395  T

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Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 32444752 - 32444825
Alignment:
Q  22 gacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||||||||||  | ||| | |||||||| |||||||||||||||||||||| | ||||||||||||    
T  32444752 gacactgacacgtcaacaccattaacaatttgagaagatgacataattcaatgtaatcaaatgtgtcggtgtcg 32444825  T

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Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 8420041 - 8420089
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggac 98  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  8420041 tttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcggac 8420089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 42192282 - 42192322
Alignment:
Q  42 aataaaattttgagaaaatgacataattcaatgtaatcaca 82  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  42192282 aataaaattttgagacaatgacataattcaatgtaatcaca 42192322  T

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Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 2548404 - 2548451
Alignment:
Q  53 gagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||| |||||||||| |||||||| |||||||||||||||||||    
T  2548404 gagaaaattacataattcagtgtaatcataagtgtcggtgtcggacac 2548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 6247636 - 6247687
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||||||||    
T  6247636 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 6247687  T

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Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 31084337 - 31084420
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcg-----gtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| ||||||||||||||||| ||||||||||     ||||||||||||| ||||||| ||||| |||||| ||||    
T  31084337 tttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacactgggacatgcct 31084420  T

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Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 10009842 - 10009884
Alignment:
Q  52 tgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  10009842 tgagaaaatgacataattcaatgtaatcacatgtgtcgttgtc 10009884  T

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Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 15884008 - 15884054
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||||    
T  15884008 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 15884054  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 26205812 - 26205766
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcg 89  Q
    ||||||||||||||||||||||||||||| |||||||| | ||||||    
T  26205812 ataaaattttgagaaaatgacataattcagtgtaatcataggtgtcg 26205766  T

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Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 30502433 - 30502355
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||| || ||||||| |||||| | | ||||||||||||||||||| || |||| ||||| |||||| ||||    
T  30502433 tttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcct 30502355  T

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Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 30542776 - 30542698
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||| || ||||||| |||||| | | ||||||||||||||||||| || |||| ||||| |||||| ||||    
T  30542776 tttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcct 30542698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 42893374 - 42893452
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| ||||||| || |||||| ||||||||||||||| ||||| | ||||||| |||||  ||||||||||    
T  42893374 tttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcct 42893452  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 24906346 - 24906297
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 99  Q
    ||||| |||||||||||||||| |||||| |||||||||||| |||||||    
T  24906346 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtatcggaca 24906297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 38784813 - 38784858
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtc 88  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||||    
T  38784813 ataaaattgtgaaaaaatgatataattcaatgtaatcacaagtgtc 38784858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 15294943 - 15294991
Alignment:
Q  48 attttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgg 96  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||| ||||    
T  15294943 attttgaaaaaatgacataattcaaggtaatcacaagtgccggtttcgg 15294991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 28588719 - 28588667
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||||||||| |||||||||| |||||| | | |||||||||||||||||||    
T  28588719 tttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacacga 28588667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 43564901 - 43564973
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| |||||||| | |||||| | ||||||||||||||||||||| | ||||| ||| | |||||||||||    
T  43564901 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcct 43564973  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 154
Target Start/End: Complemental strand, 9031914 - 9031879
Alignment:
Q  119 ggacacgccttcaatcagaagtgttcgtgcaacaga 154  Q
    |||||||||||||||||||||||| |||||||||||    
T  9031914 ggacacgccttcaatcagaagtgtccgtgcaacaga 9031879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 11596500 - 11596448
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgata 104  Q
    |||||||||||||||||||||||||||||  || | |||||||| ||||||||||    
T  11596500 tttgagaaaatgacataattcaatgtaat--catgcgtcggtgttggacacgata 11596448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 21542089 - 21542132
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcc 127  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  21542089 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcc 21542132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 31264452 - 31264491
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcg 89  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  31264452 tttgagaaaatgacataattcagtgtaatcataagtgtcg 31264491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 4445154 - 4445204
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||| |||||||||  |||| |||| |||||||||||||||||||||||||    
T  4445154 tttgtgaaaatgaccaaatttaatgcaatcacaagtgtcggtgtcggacac 4445204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 6326342 - 6326292
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||||| |||||||||| |||||| ||||||||| | |||||||||    
T  6326342 tttgagaaaattacataattcagtgtaattacaagtgtcagcgtcggacac 6326292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 26312783 - 26312849
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||||||||| |  ||||||| |||||| | | || |||||||||||||||||||||||| |||||    
T  26312783 tttgagaaaatcaattaattcagtgtaattatatgtatcggtgtcggacacgatacgtgtctgacac 26312849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 30099070 - 30099004
Alignment:
Q  63 cataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    ||||||||  |||||| | | |||||||||||||| |||| ||||||| ||||| ||||||||||||    
T  30099070 cataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgcctt 30099004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 80
Target Start/End: Complemental strand, 43208319 - 43208289
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatca 80  Q
    |||||||||||||||||||||||||||||||    
T  43208319 tttgagaaaatgacataattcaatgtaatca 43208289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 9031977 - 9031925
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcac--aagtgtcggtgt 93  Q
    ||||| ||||||| ||||||||||||||||| |||||||  ||||||||||||    
T  9031977 ataaatttttgaggaaatgacataattcaatctaatcacaaaagtgtcggtgt 9031925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 21814320 - 21814365
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    ||||||||||||||||||| ||||||| | ||| ||||||||||||    
T  21814320 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgcctt 21814365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 23012453 - 23012380
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggaca 123  Q
    ||||||||||| | |||||| |||||||| | | |||||||||| |||||||| || |||| ||||| ||||||    
T  23012453 tttgagaaaatcatataatttaatgtaattatatgtgtcggtgttggacacgacacatgtctgacaccgggaca 23012380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 28296342 - 28296387
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||||||||||||||||||| ||| | |||| |||||||    
T  28296342 tttgagaaaatgacataattcaatgtactcatatgtgttggtgtcg 28296387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 32630780 - 32630715
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggaca 115  Q
    ||||||||||| | ||||||||||||||| | | ||||| |||||||| |||| ||||||| ||||    
T  32630780 tttgagaaaattatataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtccgaca 32630715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 41558699 - 41558654
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||||||||||||||||||||| | | ||||| ||||||    
T  41558699 tttgagaaaatgacataattcaatgtaattaaatgtgtcagtgtcg 41558654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 21522809 - 21522853
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||||||||||| ||||||| | ||| |||||||||||    
T  21522809 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcct 21522853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 21533375 - 21533419
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||||||||||| ||||||| | ||| |||||||||||    
T  21533375 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcct 21533419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 33178045 - 33178089
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||| |||||||| | |||||| |||||||||||||||||||||    
T  33178045 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 33178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 42029770 - 42029818
Alignment:
Q  54 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||||| ||||||||||||||||| | | || ||||||||||||||||    
T  42029770 agaaaatcacataattcaatgtaattatatgtatcggtgtcggacacga 42029818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 8749 - 8643
Alignment:
Q  43 ataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg-gacacgatacgtgtcggacacagggacacgccttcaatcagaagtg 141  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| | ||||| | ||      ||||| ||||| |||||| |||||||||||||||||    
T  8749 ataaaattttgagaaaatgacatgattcaatgtaaccacaagtgtggttgtcgtgtca------gtgtcagacaccgggacatgccttcaatcagaagtg 8656  T
Q  142 ttcgtgcaacaga 154  Q
    | |||||||||||    
T  8655 tccgtgcaacaga 8643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 17893853 - 17893949
Alignment:
Q  24 cacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc-ggacacagg 119  Q
    ||||||||| || ||| | |||||||||| ||||||||| |||||| ||| | |||||| |||||||||||| |||||||||||||| |||||||||    
T  17893853 cacggacacttcgacacgtataaaattttaagaaaatgatataatttaatattatcacacgtgtcggtgtcgtacacgatacgtgtctggacacagg 17893949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 18337343 - 18337421
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||||||| | ||||||| ||||| |||||| ||||    
T  18337343 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcct 18337421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 1815277 - 1815349
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| |||||||||| |||||| ||||||||||||||| ||||||| || |||| ||||| |||||||||||    
T  1815277 aaaatcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcct 1815349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 19637786 - 19637854
Alignment:
Q  54 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggac 122  Q
    |||||||||||| |||||||||||||| | |||||||||||||||||||||| | || ||||| |||||    
T  19637786 agaaaatgacattattcaatgtaatcatatgtgtcggtgtcggacacgatacatatccgacaccgggac 19637854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 38078706 - 38078654
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  38078706 tttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacga 38078654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 51410045 - 51410117
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||| |||| || ||||| | |||||||||    
T  51410045 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtatccgacaccgagacacgcct 51410117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 3921656 - 3921711
Alignment:
Q  25 acggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatca 80  Q
    |||||||||||||||  ||||| | |||||||||||||||||||||||||||||||    
T  3921656 acggacacgtcaacatcaataataatttgagaaaatgacataattcaatgtaatca 3921711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 40176595 - 40176662
Alignment:
Q  28 gacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||||   ||||||||||||||||||||| | |||||||||||||||| ||||| ||||||    
T  40176595 gacacgtcaacaccgataaaattttgagaaaatgacttcattcaatgtaatcacatgtgtcagtgtcg 40176662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 40258978 - 40258900
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||| ||||||| || |||| |||||  ||||||||||    
T  40258978 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcct 40258900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 40686832 - 40686762
Alignment:
Q  21 tgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggt 91  Q
    |||||| |||||||| |||   |||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  40686832 tgacactgacacgtcgacatcgataaaattttgataaaatgatataattcaatgtaatcataagtgtcggt 40686762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 46348428 - 46348350
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| | |||||| | |||||| ||||||||||||||||||||||| ||||||| ||||| | |||||||||    
T  46348428 tttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcct 46348350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 7988492 - 7988439
Alignment:
Q  54 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgt 107  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  7988492 agaaagtgacataattcaatgtaatcataagtgttggtgtcggacacaatacgt 7988439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 18946083 - 18946042
Alignment:
Q  46 aaattttgagaaaatgacataattcaatgtaatcacaagtgt 87  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  18946083 aaattttgagaaaatgacataattcaatgtaatcacgagtgt 18946042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 24462319 - 24462270
Alignment:
Q  46 aaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  24462319 aaattttgaaaaaatgacataattcaatgtaatcacaagtttcagtgtcg 24462270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 50195504 - 50195459
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||    
T  50195504 aaaatgacataattgaatgtaatcacatgtgtcggtgtcggacacg 50195459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 24806933 - 24806981
Alignment:
Q  24 cacggacacgtcaacaagaataaaattttgagaaaatgacataattcaa 72  Q
    |||||||||||||||| | |||||||||||||||||| |||||||||||    
T  24806933 cacggacacgtcaacatggataaaattttgagaaaataacataattcaa 24806981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 28170388 - 28170439
Alignment:
Q  42 aataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  28170388 aataaaattttga-aaaatgacataattcaatgtaataacaagtgtcagtgtc 28170439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 31667443 - 31667487
Alignment:
Q  54 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggac 98  Q
    |||||||||||||||| |||||||||||| |||||||||||||||    
T  31667443 agaaaatgacataattaaatgtaatcacatgtgtcggtgtcggac 31667487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 43966816 - 43966880
Alignment:
Q  46 aaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 110  Q
    ||||||||||||||||| | ||||||||||||||||| |||| ||||||||| || | |||||||    
T  43966816 aaattttgagaaaatgatacaattcaatgtaatcacatgtgttggtgtcggatactacacgtgtc 43966880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 14332422 - 14332465
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  14332422 tttgagaaaatgacataattcaatgtaatcacatatgtcggtgt 14332465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 41877515 - 41877464
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||||||||| |||||||| | |||||| ||||||||||||||||||||||    
T  41877515 tttgagaaaattacataatttagtgtaattacaagtgtcggtgtcggacacg 41877464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 46748997 - 46748910
Alignment:
Q  6 caccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    ||||| ||| || ||||||||||||||| | |||  | ||||||||||| |||| |||||| |||||||||||||||| |||| ||||    
T  46748997 caccacacatgacactgacacggacacgccgacaccattaaaattttgaaaaaacgacatagttcaatgtaatcacaaatgtcagtgt 46748910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 17008000 - 17007954
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||    
T  17008000 aaaattacataattcaatataatcacaagtgtcagtgtcggacacga 17007954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 22515932 - 22515854
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||| | |||||| ||||||||||||||||||||||| || | || ||||| | |||||||||    
T  22515932 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccgagacacgcct 22515854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 24176811 - 24176873
Alignment:
Q  28 gacacgtcaacaagaataaaattttgagaaaa-tgacataattcaatgtaatcacaagtgtcg 89  Q
    ||||||||||||   ||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  24176811 gacacgtcaacaccgataaaattttgagaaaaatgacatgatttaatgtaatcacaagtgtcg 24176873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 29163421 - 29163351
Alignment:
Q  55 gaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    |||||| |||||||||||| |||| | | ||||||||||||||||||| ||||| | ||||| ||||||||    
T  29163421 gaaaatcacataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgacaccgggacacg 29163351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 37598861 - 37598923
Alignment:
Q  66 aattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||| |||||| | ||||||||||||||||||||| ||||||| ||||  |||||||||||    
T  37598861 aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcct 37598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 40181885 - 40181963
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||| |||||||||| |||||| | | || |||||||||||||| | |||||||  |||| |||||||||||    
T  40181885 tttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacacaacacgtgtcctacaccgggacacgcct 40181963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 42359494 - 42359416
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| ||| |||||| |||||| |||||||||||||||||||| ||   ||||| ||||| |||||||||||    
T  42359494 tttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcct 42359416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 7888106 - 7888155
Alignment:
Q  47 aattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgg 96  Q
    |||||||||||| |  ||||||| ||||||||||||||||||||||||||    
T  7888106 aattttgagaaactcgcataatttaatgtaatcacaagtgtcggtgtcgg 7888155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 11412811 - 11412763
Alignment:
Q  52 tgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    |||||||||||||||||||||||| |||| | |||||||||| ||||||    
T  11412811 tgagaaaatgacataattcaatgtgatcataggtgtcggtgttggacac 11412763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 22881661 - 22881609
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 102  Q
    ||||| ||||| |||||||| | |||||| |||||||||||||||||||||||    
T  22881661 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacga 22881609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 32461464 - 32461420
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  32461464 gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcct 32461420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 1486754 - 1486671
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg-----gacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| |||||| | ||||||||||||||     ||||||| ||||||| ||||| |||||||||||    
T  1486754 tttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcct 1486671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 11571585 - 11571628
Alignment:
Q  36 aacaagaataaaattttgagaaaatgacataattcaatgtaatc 79  Q
    |||||| |||| | ||||||||||||||||||||||||||||||    
T  11571585 aacaaggataataatttgagaaaatgacataattcaatgtaatc 11571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 19058889 - 19058850
Alignment:
Q  62 acataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  19058889 acataattcagtgtaattacaagtgtcggtgtcggacacg 19058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 26390172 - 26390133
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  26390172 aaaatgacataattgaatgtaatcacaagtgtcagtgtcg 26390133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 34184673 - 34184720
Alignment:
Q  41 gaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtc 88  Q
    ||||||||| |||||||||| | ||||||||||||||||||| |||||    
T  34184673 gaataaaatcttgagaaaataatataattcaatgtaatcacatgtgtc 34184720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 24334737 - 24334699
Alignment:
Q  63 cataattcaatgtaatcacaagtgtcggtgtcggacacg 101  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  24334737 cataattcagtgtaattacaagtgtcggtgtcggacacg 24334699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 36878475 - 36878541
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||||||||| |||||||||| |||||| | | ||||||||||| ||||||| || |||| |||||    
T  36878475 tttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacacgaaacatgtccgacac 36878541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 50233411 - 50233445
Alignment:
Q  46 aaattttgagaaaatgacataattcaatgtaatca 80  Q
    ||||||| |||||||||||||||||||||||||||    
T  50233411 aaattttaagaaaatgacataattcaatgtaatca 50233445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 6612216 - 6612171
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  6612216 tttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 8203835 - 8203872
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgt 87  Q
    |||||||||||||||||| | |||||||||||||||||    
T  8203835 tttgagaaaatgacataagtgaatgtaatcacaagtgt 8203872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 18950925 - 18951002
Alignment:
Q  14 acgatactgacacggacacgtcaacaagaataaaattttgagaaaa-tgacataattcaatgtaatcacaagtgtcgg 90  Q
    |||||||||||||||||||| ||| |   ||| |||||| |||||| |||||||||||| ||||||| || |||||||    
T  18950925 acgatactgacacggacacgacaataccgatacaattttaagaaaaatgacataattcagtgtaatcgcaggtgtcgg 18951002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 24577231 - 24577186
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  24577231 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 25934675 - 25934720
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 129  Q
    ||||||||||||||||||| ||||||| ||||| |||| |||||||    
T  25934675 gtgtcggtgtcggacacgacacgtgtctgacacggggatacgcctt 25934720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 40317867 - 40317810
Alignment:
Q  44 taaaattttgagaaaatgacataattcaatgtaatcacaagtg-tcggtgtcggacac 100  Q
    |||||||||||||||||| ||||||||||| ||||| || ||| | ||||||||||||    
T  40317867 taaaattttgagaaaatggcataattcaatataatcgcatgtgctgggtgtcggacac 40317810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 2445884 - 2445928
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    |||||||||||||||||||||||| |||||| | |||||| ||||    
T  2445884 tttgagaaaatgacataattcaatttaatcatatgtgtcgatgtc 2445928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 12918958 - 12919034
Alignment:
Q  49 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 125  Q
    |||| ||| ||| |||||||||||||| || | | |||| ||| |||||||||| ||||||| ||||| ||||||||    
T  12918958 tttttagacaatcacataattcaatgtgattatatgtgttggtatcggacacgacacgtgtctgacacggggacacg 12919034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 14613113 - 14613061
Alignment:
Q  90 gtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgt 142  Q
    ||||||||||||| |  ||||||| || | |||||||||||||||||||||||    
T  14613113 gtgtcggacacgacatatgtcggatacggagacacgccttcaatcagaagtgt 14613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 31015057 - 31015097
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcgg 90  Q
    ||||||||||| |||||||||| |||||| |||||||||||    
T  31015057 tttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 33202923 - 33202995
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||||||||| |||||||||||| | || | |||||| |||||||||| | || ||||| | |||||||||    
T  33202923 aaaatgacataaatcaatgtaatcatatgttttggtgtcagacacgatacatatccgacaccgtgacacgcct 33202995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 40747818 - 40747790
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaat 78  Q
    |||||||||||||||||||||||||||||    
T  40747818 tttgagaaaatgacataattcaatgtaat 40747790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 40917808 - 40917852
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||||||| |||||||| ||||||| ||||| |||||||||||    
T  40917808 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcct 40917852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 47989469 - 47989556
Alignment:
Q  7 accagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||| || ||||| |||||| | |||  ||||| | ||| | ||||| |||||||||| |||||| ||||||||||||||||    
T  47989469 accagacacgacacagacactgacacgccgacac-aataataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 18181 - 18110
Alignment:
Q  22 gacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 93  Q
    ||||| |||||||| |||   |||||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  18181 gacactgacacgtcgacaccgataaaattttgagaaaataacataattcaatgtaatcgcaagtgttggtgt 18110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 507 - 433
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacac 124  Q
    ||||| ||||| ||| |||||| |||||| |||||||||||||||||||||||  |||||| ||||| |||||||    
T  507 tttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccgggacac 433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 45563 - 45509
Alignment:
Q  62 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||| |||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacac 45509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 70292 - 70358
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 116  Q
    ||||| ||||| |||||||||| |||||| | ||||||||||||||||||||| ||||||| |||||    
T  70292 tttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacac 70358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 8835 - 8890
Alignment:
Q  73 tgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||| | |||||||||    
T  8835 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcct 8890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 14544 - 14619
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| ||||| |||||||||| |||||| |||||||   ||||||||||||| ||||||| ||||| | |||||||||    
T  14544 tttgaaaaaatcacataattcagtgtaattacaagtg---gtgtcggacacgacacgtgtccgacaccgagacacgcct 14619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 4922 - 4848
Alignment:
Q  56 aaaatgacataattcaatgtaatcacaagtgtcggtgtc--ggacacgatacgtgtcggacacagggacacgcct 128  Q
    ||||| |||||||||| |||||| |||||||| ||||||  | |||||| || |||| |||||||||||||||||    
T  4922 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcct 4848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 5058 - 5016
Alignment:
Q  73 tgtaatcacaagtgtcggtgtcggacacgatacgtgtcggaca 115  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||    
T  5058 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgaca 5016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 63787 - 63837
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 100  Q
    ||||||||||| |||||||||| || ||| ||||||||||||||| |||||    
T  63787 tttgagaaaattacataattcagtgcaattacaagtgtcggtgtcagacac 63837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 56936 - 56981
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 95  Q
    ||||||||||||| |||||||| |||||||| ||||||| ||||||    
T  56936 tttgagaaaatgatataattcagtgtaatcataagtgtcagtgtcg 56981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 10313 - 10260
Alignment:
Q  89 ggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgt 142  Q
    |||||||||| |||| |||||||||||   |||||| |||||||||||||||||    
T  10313 ggtgtcggacgcgatgcgtgtcggacagcaggacacaccttcaatcagaagtgt 10260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 51825 - 51888
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcacaagtgt---cggtgtcggacacgatacgtgtc 110  Q
    ||||| ||||| |||||||||| |||||| ||||||||   ||||||| |||||||||||||||    
T  51825 tttgaaaaaatcacataattcagtgtaattacaagtgttgtcggtgtcagacacgatacgtgtc 51888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 240095 - 240022
Alignment:
Q  21 tgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 94  Q
    ||||||||||| ||  ||||  |||| | ||||||||||| | ||||||||||||||||| | |||||||||||    
T  240095 tgacacggacatgttgacaactataataatttgagaaaataatataattcaatgtaatcatatgtgtcggtgtc 240022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 7704 - 7736
Alignment:
Q  50 tttgagaaaatgacataattcaatgtaatcaca 82  Q
    ||||||||||||||||||||||||| |||||||    
T  7704 tttgagaaaatgacataattcaatgcaatcaca 7736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 8635 - 8591
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||||||| |||||||||||||||||| ||||| || ||||||||    
T  8635 gtgtcggtatcggacacgatacgtgtccgacactggtacacgcct 8591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 225358 - 225274
Alignment:
Q  5 acaccagacacgatactgacacggacacgtcaacaagaataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcg 89  Q
    ||||| ||||||| || ||||| |||||| | |||   |||| | ||||||||||||||||||| ||||||||| | ||||||||    
T  225358 acaccggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcg 225274  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 241653 - 241697
Alignment:
Q  84 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 128  Q
    |||| |||||||||||||| ||||||| ||||| |||||||||||    
T  241653 gtgttggtgtcggacacgacacgtgtccgacaccgggacacgcct 241697  T

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