View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18686_low_2 (Length: 757)
Name: NF18686_low_2
Description: NF18686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18686_low_2 |
 | |
|
| [»] scaffold0110 (2 HSPs) |
| | |
|
| [»] scaffold0014 (4 HSPs) |
| | |
|
| [»] scaffold0308 (1 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
| [»] scaffold0654 (1 HSPs) |
| | |
|
| [»] scaffold0429 (1 HSPs) |
| | |
|
| [»] scaffold0051 (2 HSPs) |
| | |
|
| [»] scaffold0177 (1 HSPs) |
| | |
|
| [»] scaffold0237 (1 HSPs) |
| | |
|
| [»] scaffold0054 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 613; Significance: 0; HSPs: 33)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 613; E-Value: 0
Query Start/End: Original strand, 19 - 743
Target Start/End: Original strand, 30577820 - 30578543
Alignment:
| Q |
19 |
ataagggtactgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30577820 |
ataagggtactgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatc |
30577919 |
T |
|
| Q |
119 |
cattaatcattatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaa |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30577920 |
cattaatcattatattgtagctacgaagatcaatagtcactccgttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaa |
30578019 |
T |
|
| Q |
219 |
atacccatctattaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttcc |
318 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||| |
|
|
| T |
30578020 |
atacccatctattaaagaactacaagtaacaacatcaggtttcacactttgttttatcataacagccaaaacacttttacctcctttcacatcaccttcc |
30578119 |
T |
|
| Q |
319 |
ttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgac |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
30578120 |
ttacataaaccatcgatcaatatattaaaactacaaacatttgggacaatgtttttcaatctcatttcattaaacaaacgaatagcatcttccaattgac |
30578219 |
T |
|
| Q |
419 |
ccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactac |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||| |
|
|
| T |
30578220 |
ccacaatacaaaaaccatatattagagtattatacgtgacaacatcaggaaaaattctcttgacaaccatctcacaatataaatcatacgcatcaactac |
30578319 |
T |
|
| Q |
519 |
aagtttatctttgcaaagacgattaataatcatggagtacataaaccgatctgacttaaccaccaccaacccttcaatctttccaagcaactgtagggca |
618 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30578320 |
aagtttatctttacaaagacgattaataatcatggagtacataaactgatctggcttaaccaccaccaacccttcaatctttccaagcaact-tagggca |
30578418 |
T |
|
| Q |
619 |
gannnnnnnnctccggatttacataacccgttgatcaacgttccataactaacattatcaagacgaaaccccttagctataacatcgtcatgaaaatgca |
718 |
Q |
| |
|
| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30578419 |
gcttttgtttctccggacttacataacccgttgatcaacgttccataactaacattatcaagacgaaaccccttagctataacatcgtcatgaaaatgca |
30578518 |
T |
|
| Q |
719 |
atgctttcttaacttcgttattaat |
743 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
30578519 |
atgctttcttaacttcgttattaat |
30578543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 19 - 713
Target Start/End: Complemental strand, 30154447 - 30153753
Alignment:
| Q |
19 |
ataagggtactgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatc |
118 |
Q |
| |
|
||||||| | ||||||||||||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
30154447 |
ataagggaattgtatgttatagtattaggagtcaaacttttggaatgcatttctttaaagagaatcacagcttcatccaccattttaaccttacataatc |
30154348 |
T |
|
| Q |
119 |
cattaatcattatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaa |
218 |
Q |
| |
|
|||||||||| | | |||||||||||| || | ||||||||| || |||| | | | ||||| |||| | ||||| ||| ||| |||||||||||| |
|
|
| T |
30154347 |
cattaatcatgacactgtagctacgaacattaggagtcactccccttcgagcaagtgtatcgaatacatatgtggccttattcacttctttaaccaagaa |
30154248 |
T |
|
| Q |
219 |
atacccatctattaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttcc |
318 |
Q |
| |
|
||||||||| || || ||| || |||| ||||||||||||| |||| ||||||||||||||||| ||||||||| |||||| |||||| || |||||| |
|
|
| T |
30154247 |
atacccatccatcaaagaattataagtaacaacatcaggttccacatgttgttttatcataacagtcaaaacacttttagctcttttcacctctccttcc |
30154148 |
T |
|
| Q |
319 |
ttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgac |
418 |
Q |
| |
|
|||||||||||||| | ||||||||| || || | ||||| |||| ||||||| | | |||||||||| ||||||| || || |||| ||| ||| |
|
|
| T |
30154147 |
ttacataaaccatcaaccaatatattgaaggtatacacattggggttggtgtttttgagtatcatttcattgaacaaaccaactgcttcttcgaattgac |
30154048 |
T |
|
| Q |
419 |
ccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactac |
518 |
Q |
| |
|
||||||| ||||| ||||| |||| | |||| | | ||| |||| |||| ||||| |||| |||| ||||||| |||| | ||||||||| |||| ||| |
|
|
| T |
30154047 |
ccacaatgcaaaatccatagattaaactattgaaagtgacgacattaggataaattttcttaacaatcatttcagaatataaatcatacgcgtcaattac |
30153948 |
T |
|
| Q |
519 |
aagtttatctttgcaaagacgattaataatcatggagtacataaaccgatctgacttaaccaccaccaacccttcaatctttccaagcaactgtagggca |
618 |
Q |
| |
|
|||||||| || || | || || ||| || | |||||| | ||| | |||||| | |||||||||||||||| ||||||||| |||||| |
|
|
| T |
30153947 |
gagtttatccttacagaaactatcaatgattgcagtgtacattatgacatcaggtctaaccaataataacccttcaatctttctaagcaactgcagggca |
30153848 |
T |
|
| Q |
619 |
gannnnnnnnctccggatttacataacccgttgatcaacgttccataactaacattatcaagacgaaaccccttagctataacatcgtcatgaaa |
713 |
Q |
| |
|
| |||||||||||||||||||||||||||| || ||||||||||| | | |||| ||| ||||| ||||||||||||| |||||| |
|
|
| T |
30153847 |
gctcttgtttctccggatttacataacccgttgatcaatgtcccataactaacctcgttaagataaaatccctttgctataacatcgttatgaaa |
30153753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 29 - 533
Target Start/End: Complemental strand, 24934604 - 24934100
Alignment:
| Q |
29 |
tgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcat |
128 |
Q |
| |
|
||||||||| ||||| ||||| |||||||||| | ||||||||||| |||||| | || ||||||||||||||||||| ||| | || |||||||||||| |
|
|
| T |
24934604 |
tgtatgttacagtattaggagccatacttttggaatgcatttctttgaagagattaacggcttcatccaccattttagtcttgcatagtccattaatcat |
24934505 |
T |
|
| Q |
129 |
tatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatct |
228 |
Q |
| |
|
||| ||||||| ||| |||| ||||||||| || |||||||| |||||| | | || | ||||| ||| ||| ||| ||||||||||||||||| |
|
|
| T |
24934504 |
aatactgtagctttgaacatcaggagtcactccccttctagccatagtgttgaacacaaatgtggccttattctcttgtttgaccaagaaatacccatcc |
24934405 |
T |
|
| Q |
229 |
attaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaac |
328 |
Q |
| |
|
||||| ||| || |||| |||| || || | ||||| |||||||||||||||||| || ||| || ||||| ||||| || |||||||||||||||| |
|
|
| T |
24934404 |
attaaagaattataagtaacaatattagaatccacaccttgttttatcataacagctaacacatttctagcttttttcatctctccttccttacataaac |
24934305 |
T |
|
| Q |
329 |
catcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaataca |
428 |
Q |
| |
|
|||| | |||||||||||| || |||| | || | |||||||||||| ||||| ||| ||||||| || || |||||||||||||||||||| | |
|
|
| T |
24934304 |
catcaaccaatatattaaatgtataaacgtctggtttaatgtttttcaacaacatttgattgaacaaaccaactgcttctttcaatcgacccacaatcaa |
24934205 |
T |
|
| Q |
429 |
aaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatct |
528 |
Q |
| |
|
| | ||||||||||||||| |||| | ||||||||| |||||||||||||| |||| ||||||| || | | |||| | |||| || |||||||||||| |
|
|
| T |
24934204 |
acagccatatattagagtagtataagtgacaacatctggaaaaattctcttaacaatcatttcagaacataaatcagaggcatgaattacaagtttatcc |
24934105 |
T |
|
| Q |
529 |
ttgca |
533 |
Q |
| |
|
||||| |
|
|
| T |
24934104 |
ttgca |
24934100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 64 - 533
Target Start/End: Complemental strand, 24942102 - 24941633
Alignment:
| Q |
64 |
tgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagctacgaagatcaattgtcactccct |
163 |
Q |
| |
|
|||| |||||| |||||| | || |||||||||||||||||| ||||| ||||||| | ||||| | | |||||||| |||||| | | |||||| |
|
|
| T |
24942102 |
tgcaattctttgaagagattgacggcttcatccaccattttattcttacataatccagttatcatgacactgtagctatgaagattaggagccactcctc |
24942003 |
T |
|
| Q |
164 |
tttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatcaggtttcac |
263 |
Q |
| |
|
|||||||||||| |||||||| |||| | ||| ||||| ||| ||||||||||||| ||||||| || || ||| || |||| ||||||| ||||| ||| |
|
|
| T |
24942002 |
tttgagccatagtgttgaatacatatgtggccctgttcacttctttaaccaagaaacacccatccatcaaagaagtataagtaacaacattaggttccac |
24941903 |
T |
|
| Q |
264 |
actttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattaggg |
363 |
Q |
| |
|
|| |||||||||||||||||| || ||| || ||||| ||| | || |||||||||||||||||||| | |||| |||||||| | ||||| ||| |
|
|
| T |
24941902 |
accttgttttatcataacagctaacacatttctagcttgtttaatttctccttccttacataaaccatcaaccaatgtattaaaagtttgaacatccggg |
24941803 |
T |
|
| Q |
364 |
tcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacat |
463 |
Q |
| |
|
||||||||||| ||||| ||| |||||||||| ||| ||||| ||| |||||||||||||||| ||||||||||||||| |||| | |||||||| |
|
|
| T |
24941802 |
ctgatgtttttcaacaacatttgatttaacaaacgaacagcttctttaaattgacccacaatacaaaagccatatattagagtagtataagtgacaacat |
24941703 |
T |
|
| Q |
464 |
caggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatctttgca |
533 |
Q |
| |
|
| |||||||||||||| |||| ||||||| || | | |||| | |||| || |||||||||||| ||||| |
|
|
| T |
24941702 |
ctggaaaaattctcttaacaatcatttcagaacataaatcagaggcatgaattacaagtttatccttgca |
24941633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 27 - 533
Target Start/End: Original strand, 24739255 - 24739761
Alignment:
| Q |
27 |
actgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatc |
126 |
Q |
| |
|
||||||||||| ||||| ||||| |||||||||| | ||||||||||| | |||| | || ||||||||||||||||||| ||||| || |||||||||| |
|
|
| T |
24739255 |
actgtatgttacagtattaggagccatacttttggaatgcatttctttgaggagattaacggcttcatccaccattttagtcttacatagtccattaatc |
24739354 |
T |
|
| Q |
127 |
attatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccat |
226 |
Q |
| |
|
|| | | | |||||| ||| |||| ||||||||| || |||||||| |||||| | | || | ||||| ||| ||| ||| |||||||||||||||| |
|
|
| T |
24739355 |
atgacactatagctatgaacatcaggagtcactccccttctagccatagtgttgaacacaaatgtggccttattctcttgtttgaccaagaaatacccat |
24739454 |
T |
|
| Q |
227 |
ctattaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataa |
326 |
Q |
| |
|
| || || ||| || |||| | |||||||| | |||||||||||||||||||||||| || ||| || ||||| ||||| || |||||||||||||| |
|
|
| T |
24739455 |
ccatcaaagaattataagtaatgacatcaggatccacactttgttttatcataacagctaacacatttctagcttttttcatctctccttccttacataa |
24739554 |
T |
|
| Q |
327 |
accatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaata |
426 |
Q |
| |
|
|||||| | |||||||||||| || ||| | || | |||||||||||| ||||| ||| ||||||| || || |||||||||||||||||||| |
|
|
| T |
24739555 |
accatcaaccaatatattaaatgtataaatgtctggtttaatgtttttcaacaacatttgattgaacaaaccaactgcttctttcaatcgacccacaatc |
24739654 |
T |
|
| Q |
427 |
caaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttat |
526 |
Q |
| |
|
|| | ||||| |||| |||||| || | || ||||||||| |||||||||||| || ||||| | |||| | |||| | ||||||| ||||||||||| |
|
|
| T |
24739655 |
aaacagccatacattaaagtattgtaagtgatgacatcaggagaaattctcttgagaagcatttgagaatataaatcaaaagcatcaattacaagtttat |
24739754 |
T |
|
| Q |
527 |
ctttgca |
533 |
Q |
| |
|
| ||||| |
|
|
| T |
24739755 |
ccttgca |
24739761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 29 - 713
Target Start/End: Original strand, 29949959 - 29950640
Alignment:
| Q |
29 |
tgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcat |
128 |
Q |
| |
|
|||||| || |||||| ||||||||| | || | ||||||||||| |||||| || ||||||||| |||||||||| ||||| |||||| |||||||| |
|
|
| T |
29949959 |
tgtatgatacagtatctggagtcatattactggaatgcatttctttgaagagattcgcagcttcattcaccattttattcttacataatccgttaatcat |
29950058 |
T |
|
| Q |
129 |
tatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatct |
228 |
Q |
| |
|
|||||||||||| || || | ||||||||| || ||| | | |||||||| || | | |||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
29950059 |
gatattgtagctaaaaacattaggagtcactccccttagaggaagggtgttgaatagatgtttggccttgttgacttctttaaccaagaaataaccatcc |
29950158 |
T |
|
| Q |
229 |
attaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaac |
328 |
Q |
| |
|
||||| |||||| |||| |||| |||||||| ||||| |||||||||||||||||| || ||| | ||||| |||||| || |||| ||||||||||| |
|
|
| T |
29950159 |
attaaagaactataagtaacaatatcaggttccacacgttgttttatcataacagccaacacatgtctagcttttttcacctctccttgcttacataaac |
29950258 |
T |
|
| Q |
329 |
catcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaataca |
428 |
Q |
| |
|
|||||| |||| || | ||| || ||||| || |||||||||| ||||| ||| ||||||| || || ||||||| | |||||| ||| | |
|
|
| T |
29950259 |
catcgaccaatgtagtgaaagtaagaacatccggactgatgtttttcatcgacatttgatttaacaaaccaactgcttctttcatttgacccaaaatgga |
29950358 |
T |
|
| Q |
429 |
aaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatct |
528 |
Q |
| |
|
||||||||||||||||||||| || | || |||| |||| |||| | || |||| ||||||| |||| | ||||||| ||||| ||||| |||||| |
|
|
| T |
29950359 |
aaaaccatatattagagtattgtaagtgatgacattaggatgaattttgttaacaatcatttcagaatataaatcatacccatcactaacaagcttatct |
29950458 |
T |
|
| Q |
529 |
ttgcaaagacgattaataatcatggagtacataaaccgatctgacttaaccaccaccaacccttcaatctttccaagcaactgtagggcagannnnnnnn |
628 |
Q |
| |
|
|| || ||| | ||| || || |||||||| ||| | |||| |||| |||||||| ||||||| |||||||||||||||||| |
|
|
| T |
29950459 |
ttacagagagcgtcaatgattgtgttgtacataacgacatcaggctta---accaacaaccctttaatcttttcaagcaactgtagggcagcttttgttt |
29950555 |
T |
|
| Q |
629 |
ctccggatttacataacccgttgatcaacgttccataactaacattatcaagacgaaaccccttagctataacatcgtcatgaaa |
713 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||||||||||||| || |||| |||| || || |||||||||| |||||||| |
|
|
| T |
29950556 |
ctccggatttacataacccgttgatcaagatcccataactaacatgattaagatgaaatccttttgctataacatgatcatgaaa |
29950640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 29 - 533
Target Start/End: Original strand, 21160687 - 21161191
Alignment:
| Q |
29 |
tgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcat |
128 |
Q |
| |
|
||||||||| | ||||||||| ||| |||| || |||||||||||||||||| | || |||||||||||||||||| ||||| || |||||||||||| |
|
|
| T |
21160687 |
tgtatgttacaatatcaggagccatgttttttaaatgcatttctttaaagagattaacggcttcatccaccattttattcttacatagtccattaatcat |
21160786 |
T |
|
| Q |
129 |
tatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatct |
228 |
Q |
| |
|
| | | |||||| ||| || | ||||||||| || | |||||| |||||| | | || | ||||| ||| ||| ||| ||||||||||||||||| |
|
|
| T |
21160787 |
gacagtatagctatgaacattagaagtcactccccttctaaccatagtgttgaacacaaatgtggccttattcacttctttgaccaagaaatacccatcc |
21160886 |
T |
|
| Q |
229 |
attaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaac |
328 |
Q |
| |
|
|| || ||||| |||| ||||||| | ||| ||| | |||||||||||||| ||| || || || ||||| ||||| || |||||||||||||||| |
|
|
| T |
21160887 |
atcaaaaaactataagtaacaacattaagttccacgccttgttttatcataaaagctaacacttttctagcttttttcatctctccttccttacataaac |
21160986 |
T |
|
| Q |
329 |
catcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaataca |
428 |
Q |
| |
|
|||| | |||| | |||||| | |||||| ||| ||||||||||| ||||||||| |||||| ||| || | ||||| | |||||||||| || |
|
|
| T |
21160987 |
catcaaccaatgtgttaaaagttacaacattggggctgatgtttttcaacaacatttcatttaacaaatcaattgcttgtttcatttgacccacaatgca |
21161086 |
T |
|
| Q |
429 |
aaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatct |
528 |
Q |
| |
|
||| |||||||||| ||||||||| | || |||| |||||| |||||| || ||||||||||| |||| | |||| | ||||||| |||||||||||| |
|
|
| T |
21161087 |
aaagccatatattaaagtattataggtaaccacattaggaaatattctcatggcaaccatttcagaatataaatcaaaagcatcaattacaagtttatcc |
21161186 |
T |
|
| Q |
529 |
ttgca |
533 |
Q |
| |
|
||||| |
|
|
| T |
21161187 |
ttgca |
21161191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 19 - 713
Target Start/End: Complemental strand, 30149474 - 30148783
Alignment:
| Q |
19 |
ataagggtactgtatgttatagtatcaggagtcata-cttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaat |
117 |
Q |
| |
|
||||||| | ||||||||| ||| | |||| ||||| |||| |||| |||||||||| || ||| | || |||||||||||||||||| ||||| |||| |
|
|
| T |
30149474 |
ataagggaattgtatgttacagtgttaggaatcatatctttcgaat-gcatttctttgaaaagatttacggcttcatccaccattttattcttacataat |
30149376 |
T |
|
| Q |
118 |
ccattaatcattatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaaga |
217 |
Q |
| |
|
|| |||||||| |||||||||||| || || | ||||||||| || ||| | | |||||||| || | | |||||||| ||| ||||||||||| |
|
|
| T |
30149375 |
ccgttaatcatgatattgtagctaaaaacattaggagtcactccccttagagaaagggtgttgaatagatgtttggccttgttgacttctttaaccaaga |
30149276 |
T |
|
| Q |
218 |
aatacccatctattaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttc |
317 |
Q |
| |
|
|||| ||||| ||||| |||||| |||| |||| |||||||| ||||| |||||||||||||||||| || ||| | ||||| |||||| || |||| |
|
|
| T |
30149275 |
aataaccatccattaaagaactataagtaacaatatcaggttccacacgttgttttatcataacagccaacacatatctagcttttttcacctctcctta |
30149176 |
T |
|
| Q |
318 |
cttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcga |
417 |
Q |
| |
|
||||||||||||||||| |||| || | ||| || ||||| || |||||||||| ||||| ||| ||||||| || || ||||||| | || |
|
|
| T |
30149175 |
cttacataaaccatcgaccaatgtagtgaaagtaagaacatccggactgatgtttttcatcgacatttgatttaacaaaccaactgcttctttcatttga |
30149076 |
T |
|
| Q |
418 |
cccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaacta |
517 |
Q |
| |
|
|||| ||| |||||||||||||||||||||| || | || |||| |||| |||| | || |||| ||||||| |||| | ||||||| ||||| | |
|
|
| T |
30149075 |
cccaaaatggaaaaaccatatattagagtattgtaagtgatgacattaggatgaattttgttaacaatcatttcagaatataaatcatacccatcactaa |
30148976 |
T |
|
| Q |
518 |
caagtttatctttgcaaagacgattaataatcatggagtacataaaccgatctgacttaaccaccaccaacccttcaatctttccaagcaactgtagggc |
617 |
Q |
| |
|
|||| |||||||| || ||| | ||| || || |||||||| ||| | |||| |||| ||||||| ||||||| |||||||||||||||| |
|
|
| T |
30148975 |
caagcttatctttacagagaaagtcaatgattgtgttgtacataacgacatcaggctta---accaaaaaccctttaatcttttcaagcaactgtagggc |
30148879 |
T |
|
| Q |
618 |
agannnnnnnnctccggatttacataacccgttgatcaacgttccataactaacattatcaagacgaaaccccttagctataacatcgtcatgaaa |
713 |
Q |
| |
|
|| |||||||||||||||||||||||||||| | ||||||||||||| || |||| |||| || || |||||||||| |||||||| |
|
|
| T |
30148878 |
agcttttgtttctccggatttacataacccgttgatcaagatcccataactaacatgattaagatgaaatccttttgctataacatgatcatgaaa |
30148783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 29 - 284
Target Start/End: Original strand, 29953756 - 29954011
Alignment:
| Q |
29 |
tgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcat |
128 |
Q |
| |
|
|||||| ||| ||||||||||||||| || || | ||||| ||||| |||||| || ||||||||| |||||||||| ||||| |||||| |||||||| |
|
|
| T |
29953756 |
tgtatgatattgtatcaggagtcatatttctggaatgcatatctttgaagagattcgcagcttcattcaccattttattcttacataatccgttaatcat |
29953855 |
T |
|
| Q |
129 |
tatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatct |
228 |
Q |
| |
|
| |||||||||| |||| ||| ||||||||| ||||||| |||| ||||||||||||| | |||||||| ||| |||||| | |||||||||||| |
|
|
| T |
29953856 |
gacattgtagctatgaagttcaggagtcactcccctttgagcaatagtgttgaatatatatgtggccttgttgacttctttaactaggaaatacccatcc |
29953955 |
T |
|
| Q |
229 |
attaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagc |
284 |
Q |
| |
|
|| || ||| || |||| ||||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
29953956 |
atcaaagaagtataagtaacaacattaggttccacaccttgttttatcataacagc |
29954011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 27 - 300
Target Start/End: Complemental strand, 30053366 - 30053093
Alignment:
| Q |
27 |
actgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatc |
126 |
Q |
| |
|
||||||||| | ||||| ||||||||| |||| || ||||||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
30053366 |
actgtatgtaacagtattaggagtcatgttttttaaatgcatttctttgaaaagtttcacagcttcatccaccattttattcttacataatccattaatc |
30053267 |
T |
|
| Q |
127 |
attatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccat |
226 |
Q |
| |
|
|| | | |||||||| ||| || | ||||||||| || ||| |||| |||||||| || | | |||||||| ||| ||| |||||||||||||||| |
|
|
| T |
30053266 |
atgacaatgtagctatgaacattaggagtcactccccttagagaaatagtgttgaatacatgtttggccttgttgacttcttttaccaagaaatacccat |
30053167 |
T |
|
| Q |
227 |
ctattaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagct |
300 |
Q |
| |
|
| || || ||| || |||| ||||||| ||||| ||| | ||||||||||||||||| || |||||| ||||| |
|
|
| T |
30053166 |
ccatcaaagaagtataagtaacaacattaggttccacgccttgttttatcataacagataacacacttgtagct |
30053093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 318 - 512
Target Start/End: Complemental strand, 30028786 - 30028592
Alignment:
| Q |
318 |
cttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcga |
417 |
Q |
| |
|
|||||| || ||||| ||||||||||||||| || |||||| ||||||||||||||||| |||||||||||||||| | || |||||||||||| || |
|
|
| T |
30028786 |
cttacacaacccatcaatcaatatattaaaagtataaacatccgggtcaatgtttttcaacatcatttcattaaacaacctaacagcatctttcaactga |
30028687 |
T |
|
| Q |
418 |
cccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatc |
512 |
Q |
| |
|
||||||||||||||||||||||| | ||| |||| | ||||||| |||||||| |||| ||||||||||| |||||| ||||| ||||| |
|
|
| T |
30028686 |
cccacaatacaaaaaccatatatcaacgtactataagtaacaacattcggaaaaatcttcttttcaaccatttcagaatacaactcataagcatc |
30028592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 64 - 549
Target Start/End: Complemental strand, 29876727 - 29876242
Alignment:
| Q |
64 |
tgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagctacgaagatcaattgtcactccct |
163 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||| ||||||| |||||| |||||||||||||| ||| ||||||| |||| || ||||||||| |
|
|
| T |
29876727 |
tgcatttcttggaagagattcattgcttcatccatcattttaaccttacaaaatccattaatcatgatactgtagctccgaacatttgcagtcactcccc |
29876628 |
T |
|
| Q |
164 |
tttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatcaggtttcac |
263 |
Q |
| |
|
| ||| |||||| ||||||||||| ||||||||| | ||| |||||||| |||| ||||| ||||| || || |||| | || |||||||||||| |
|
|
| T |
29876627 |
tctgaaccatagtgttgaatatattcttagccttgtccacttctttaaccagacaatatccatccattaaagagttataagtaataatatcaggtttcac |
29876528 |
T |
|
| Q |
264 |
actttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattaggg |
363 |
Q |
| |
|
|| || ||| ||||| ||||| | |||| | || || || |||||| || ||||| || ||| || | ||| |||||||| || | ||| | |
|
|
| T |
29876527 |
accttctttcatcatcacagcaacaacagctttaccttctctcacatttccctccttgcaaaaagcactaaccaacgtattaaaagtatactcatccgcc |
29876428 |
T |
|
| Q |
364 |
tcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacat |
463 |
Q |
| |
|
|||| ||||| |||| |||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||||| || | | |||||| | | ||||| |
|
|
| T |
29876427 |
tcaacgttttccaatttcatatcattaaacaaaccaatagcatctttcaaccgacccacaacacaaaaaccataaatcatcgcattataagtaaaaacat |
29876328 |
T |
|
| Q |
464 |
caggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatctttgcaaagacgattaataatc |
549 |
Q |
| |
|
| ||| ||| |||||| ||||||||||| ||||| |||| |||||||| | ||||| |||||||| || | || |||||||||| |
|
|
| T |
29876327 |
ccggagaaactctcttagcaaccatttcagtatacaaatcaaacgcatcatcaacaagcttatctttacacaaaccattaataatc |
29876242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 533
Target Start/End: Original strand, 24272068 - 24272513
Alignment:
| Q |
88 |
gcttcatccaccattttagccttacttaatccattaatcattatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatat |
187 |
Q |
| |
|
|||| ||||||||||||| ||||| |||| ||||||||| ||| ||||||| |||| || | ||||||||| | |||| ||||| |||||||||| |
|
|
| T |
24272068 |
gcttgatccaccattttaatcttacaaaatctattaatcatgatactgtagctccgaacattagcggtcactcccctatgagacatagtgttgaatatac |
24272167 |
T |
|
| Q |
188 |
atctagccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaa |
287 |
Q |
| |
|
| ||||||||| ||| || |||| |||| | ||| ||||| || || |||| ||||| |||||||| | | |||||| ||||| | ||| || |
|
|
| T |
24272168 |
tcttggccttgttcacttcatttaccagacaatatcgatccattaaagagttataagtaacaacgtcaggtttaatgccttgtttcatcatcatagctaa |
24272267 |
T |
|
| Q |
288 |
aacacttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttca |
387 |
Q |
| |
|
|| || ||||| ||||||| ||||||||||| || |||| | ||||||||||||| || | |||| ||||| ||||||| | || |||||| | |
|
|
| T |
24272268 |
cccatttttagcttctttcacccttccttccttacaaaatgcatcaaccaatatattaaaagtatacacatcagggttgatgttttccgatgtcatttta |
24272367 |
T |
|
| Q |
388 |
ttaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaacca |
487 |
Q |
| |
|
|| ||||||| ||| |||||||||||| ||| ||||| |||||||||| |||| || |||||| | | ||||||||| ||||||||||| ||||| |
|
|
| T |
24272368 |
ttgaacaaaccaattgcatctttcaatttaccaacaatgcaaaaaccattaattaaagcattataagtgttaacatcagggaaaattctcttagaaacca |
24272467 |
T |
|
| Q |
488 |
tttcacaatacagatcatacgcatcaactacaagtttatctttgca |
533 |
Q |
| |
|
||||| |||| | |||| | |||||| |||||||||||||||| |
|
|
| T |
24272468 |
tttcagaatataaatcaaaagcatcattatcaagtttatctttgca |
24272513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 64 - 530
Target Start/End: Complemental strand, 29882337 - 29881871
Alignment:
| Q |
64 |
tgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagctacgaagatcaattgtcactccct |
163 |
Q |
| |
|
||||||||||| || || ||| |||||||||||||||||| ||||| |||||||||||||| ||| ||||||| ||| || | ||||||||| |
|
|
| T |
29882337 |
tgcatttctttgaaaagtttcatggcttcatccaccattttaatcttacaaaatccattaatcatgatactgtagctctgaacattagcagtcactcccc |
29882238 |
T |
|
| Q |
164 |
tttgagccatagcgttgaatata-tatctagccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatcaggtttca |
262 |
Q |
| |
|
| |||| ||||| |||||||||| | || ||||||||| ||| || |||| |||| ||||| ||||| || || |||| |||||||||||||| | |
|
|
| T |
29882237 |
tatgagacatagtgttgaatatactctc-ggccttgttcacttcatttaccagacaatatccatccattaaagagctgtaagtaacaacatcaggtttaa |
29882139 |
T |
|
| Q |
263 |
cactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattagg |
362 |
Q |
| |
|
| |||||| ||||| | ||| || ||| || ||||| ||||||| ||||||||||| || ||||| | ||||||| |||| || | ||||| || |
|
|
| T |
29882138 |
tgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacacattcgg |
29882039 |
T |
|
| Q |
363 |
gtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaaca |
462 |
Q |
| |
|
| ||||||| |||| |||||| |||||||||| ||| |||||||||||| ||| ||||| ||||| ||| |||| || | |||| | ||||||| |
|
|
| T |
29882038 |
attgatgttttccaatatcattttattaaacaaatcaattgcatctttcaatttaccaacaatgcaaaatccactaattaaagcactataagtgacaaca |
29881939 |
T |
|
| Q |
463 |
tcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatcttt |
530 |
Q |
| |
|
| |||| |||||||||| || |||||||| |||| | |||| | |||||| ||| |||||||||| |
|
|
| T |
29881938 |
ttaggagaaattctctttgcagccatttcagaatataaatcaaaagcatcattaacatgtttatcttt |
29881871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 64 - 530
Target Start/End: Complemental strand, 29909493 - 29909027
Alignment:
| Q |
64 |
tgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagctacgaagatcaattgtcactccct |
163 |
Q |
| |
|
||||||||||| || || ||| |||||||||||||||||| ||||| |||||||||||||| ||| ||||||| ||| || | ||||||||| |
|
|
| T |
29909493 |
tgcatttctttgaaaagtttcatggcttcatccaccattttaatcttacaaaatccattaatcatgatactgtagctctgaacattagcagtcactcccc |
29909394 |
T |
|
| Q |
164 |
tttgagccatagcgttgaatata-tatctagccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatcaggtttca |
262 |
Q |
| |
|
| |||| ||||| |||||||||| | || ||||||||| ||| || |||| |||| ||||| ||||| || || |||| |||||||||||||| | |
|
|
| T |
29909393 |
tatgagacatagtgttgaatatactctc-ggccttgttcacttcatttaccagacaatatccatccattaaagagctgtaagtaacaacatcaggtttaa |
29909295 |
T |
|
| Q |
263 |
cactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattagg |
362 |
Q |
| |
|
| |||||| ||||| | ||| || ||| || ||||| ||||||| ||||||||||| || ||||| | ||||||| |||| || | ||||| || |
|
|
| T |
29909294 |
tgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacacattcgg |
29909195 |
T |
|
| Q |
363 |
gtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaaca |
462 |
Q |
| |
|
| ||||||| |||| |||||| |||||||||| ||| |||||||||||| ||| ||||| ||||| ||| |||| || | |||| | ||||||| |
|
|
| T |
29909194 |
attgatgttttccaatatcattttattaaacaaatcaattgcatctttcaatttaccaacaatgcaaaatccactaattaaagcactataagtgacaaca |
29909095 |
T |
|
| Q |
463 |
tcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatcttt |
530 |
Q |
| |
|
| |||| |||||||||| || |||||||| |||| | |||| | |||||| ||| |||||||||| |
|
|
| T |
29909094 |
ttaggagaaattctctttgcagccatttcagaatataaatcaaaagcatcattaacatgtttatcttt |
29909027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 406 - 560
Target Start/End: Original strand, 29954060 - 29954214
Alignment:
| Q |
406 |
tctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcat |
505 |
Q |
| |
|
|||||||| || |||||||| ||||| |||||||||| ||| | || | |||||||| |||| ||||| ||||||||| ||||||| |||| | ||||| |
|
|
| T |
29954060 |
tctttcaaccgtcccacaatgcaaaagccatatattaaagtcgtgtaagtgacaacattaggagaaattttcttgacaatcatttcagaatataaatcat |
29954159 |
T |
|
| Q |
506 |
acgcatcaactacaagtttatctttgcaaagacgattaataatcatggagtacat |
560 |
Q |
| |
|
|||||||| ||| || |||||||| ||||||| || ||| || |||||||||| |
|
|
| T |
29954160 |
acgcatcacttacgagcttatctttacaaagactatcaatgattgtggagtacat |
29954214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 30132633 - 30132576
Alignment:
| Q |
48 |
agtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccatttta |
105 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
30132633 |
agtcatacttttggaatgcatttctttaaagagaatcagagcttcatccaccatttta |
30132576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 24884939 - 24884824
Alignment:
| Q |
167 |
gagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatcaggtttcacact |
266 |
Q |
| |
|
|||| |||| |||||||| |||| | ||||||||| ||| ||||||||||||||| ||||| ||||| ||| || |||| ||||||| ||||| |||| |
|
|
| T |
24884939 |
gagcaatagtgttgaatacatatgtggccttgttcacttctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaac |
24884840 |
T |
|
| Q |
267 |
ttgttttatcataaca |
282 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
24884839 |
ttgtcttatcataaca |
24884824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 24730756 - 24730693
Alignment:
| Q |
65 |
gcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcat |
128 |
Q |
| |
|
||||||||| ||||||| | ||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
24730756 |
gcatttcttcaaagagatttacagcttcatccaccattttaatcttacataatccattaatcat |
24730693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 347
Target Start/End: Original strand, 29348695 - 29348978
Alignment:
| Q |
64 |
tgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagctacgaagatcaattgtcactccct |
163 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| ||| ||||| ||||| || || |||||||| ||||||||||| ||| || | ||||||||| |
|
|
| T |
29348695 |
tgcatttctttaaagagattcatggcttcatcaacctttttaatcttacaaaacccgttaatcatgatattgtagctctgaacattagcagtcactcccc |
29348794 |
T |
|
| Q |
164 |
tttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatcaggtttcac |
263 |
Q |
| |
|
|||||||||| |||||||||| ||||||| ||| ||| |||||| | | |||| ||||| ||||| || | | |||| |||||||||||||| | |
|
|
| T |
29348795 |
cctgagccatagtgttgaatatactcttagccttattcacttgtttaactaggcaatatccatccattaaagagcaataagtaacaacatcaggtttaat |
29348894 |
T |
|
| Q |
264 |
actttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaa |
347 |
Q |
| |
|
| |||||| ||||| | ||| || ||| || ||||| ||||||| ||||||||||| || ||||| | ||||||| |||| |
|
|
| T |
29348895 |
gccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaa |
29348978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 24898016 - 24897915
Alignment:
| Q |
27 |
actgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatc |
126 |
Q |
| |
|
|||||||| || | ||||||||| ||| |||| || |||| |||||| |||||| | ||||||||||||||||||||| ||||| |||||| |||||| |
|
|
| T |
24898016 |
actgtatgctacaatatcaggagccatgttttttaaatgcaattctttgaagagattgacagcttcatccaccattttattcttacataatccgttaatc |
24897917 |
T |
|
| Q |
127 |
at |
128 |
Q |
| |
|
|| |
|
|
| T |
24897916 |
at |
24897915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 24934000 - 24933923
Alignment:
| Q |
636 |
tttacataacccgttgatcaacgttccataactaacattatcaagacgaaaccccttagctataacatcgtcatgaaa |
713 |
Q |
| |
|
||||||||| || |||||||| || ||||||||||| | |||||| |||||||||| ||||| |||||||||||||| |
|
|
| T |
24934000 |
tttacataatccattgatcaaggtcccataactaacctgatcaaggtgaaacccctttgctatgacatcgtcatgaaa |
24933923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 24941533 - 24941456
Alignment:
| Q |
636 |
tttacataacccgttgatcaacgttccataactaacattatcaagacgaaaccccttagctataacatcgtcatgaaa |
713 |
Q |
| |
|
||||||||| || |||||||| || ||||||||||| | || |||| |||||||||| ||||| |||||||||||||| |
|
|
| T |
24941533 |
tttacataatccattgatcaaggtcccataactaacttgattaagatgaaacccctttgctatgacatcgtcatgaaa |
24941456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 629 - 731
Target Start/End: Complemental strand, 30132045 - 30131943
Alignment:
| Q |
629 |
ctccggatttacataacccgttgatcaacgttccataactaacattatcaagacgaaaccccttagctataacatcgtcatgaaaatgcaatgctttctt |
728 |
Q |
| |
|
|||| |||||||||||||||||||| | |||||||||||||||| ||| | ||| ||||| |||||||||| || ||||| |||||||||||| | |
|
|
| T |
30132045 |
ctcccgatttacataacccgttgataagggttccataactaacatgatccaatttaaatcccttttctataacatcatcgtgaaagtgcaatgctttcct |
30131946 |
T |
|
| Q |
729 |
aac |
731 |
Q |
| |
|
||| |
|
|
| T |
30131945 |
aac |
30131943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 445
Target Start/End: Original strand, 16702387 - 16702496
Alignment:
| Q |
336 |
caatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaacca |
435 |
Q |
| |
|
||||||||||||| || ||||||| |||| |||||||||||| |||||||| ||||||| || || ||||||||| |||| ||||| ||||| | | |
|
|
| T |
16702387 |
caatatattaaaagtataaacatttgggttgatgtttttcaataccatttcatggaacaaactaaacgcttctttcaattgaccaacaatgcaaaatcaa |
16702486 |
T |
|
| Q |
436 |
tatattagag |
445 |
Q |
| |
|
|| ||||||| |
|
|
| T |
16702487 |
tagattagag |
16702496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 29946339 - 29946262
Alignment:
| Q |
64 |
tgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagcta |
141 |
Q |
| |
|
|||||||||| ||||||| ||| |||||||||||||||||| ||||| |||||||||||||| ||| | |||||| |
|
|
| T |
29946339 |
tgcatttcttcaaagagattcatggcttcatccaccattttaatcttacaaaatccattaatcatgataatatagcta |
29946262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 30060259 - 30060335
Alignment:
| Q |
64 |
tgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagct |
140 |
Q |
| |
|
|||||||||| ||||||| ||| |||||||| ||| ||||| ||||| || ||||||||||||||||||||||| |
|
|
| T |
30060259 |
tgcatttcttcaaagagattcatggcttcatcgacctttttaatcttacaaaacccattaatcattatattgtagct |
30060335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 313 - 431
Target Start/End: Original strand, 24264098 - 24264216
Alignment:
| Q |
313 |
ccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttca |
412 |
Q |
| |
|
||||||||||| || |||| | ||||||||||||| || | |||| ||||| ||||||| | || |||||| ||| ||||||| ||| |||||||||| |
|
|
| T |
24264098 |
ccttccttacaaaatgcatcaaccaatatattaaaagtatacacatcagggttgatgttttccgatgtcattttattgaacaaaccaattgcatctttca |
24264197 |
T |
|
| Q |
413 |
atcgacccacaatacaaaa |
431 |
Q |
| |
|
|| ||| ||||| ||||| |
|
|
| T |
24264198 |
atttaccaacaatgcaaaa |
24264216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 193 - 431
Target Start/End: Complemental strand, 29834988 - 29834750
Alignment:
| Q |
193 |
gccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacac |
292 |
Q |
| |
|
||||| ||| |||||||||| | | |||| ||||| ||||| | ||| |||| ||||||| ||||||| | |||||| ||||| | ||| || ||| |
|
|
| T |
29834988 |
gccttattcacttttttaactaggcaatatccatccattaaagcgctataagtaacaacattgggtttcatgccttgtttcatcatcatagctaacacat |
29834889 |
T |
|
| Q |
293 |
ttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaa |
392 |
Q |
| |
|
|| ||||| |||||| | ||||||||||| || |||| | |||||||||||| || | | || ||||| ||||||| |||| |||||| ||| || |
|
|
| T |
29834888 |
ttttagcttctttcatttttccttccttacaaaatgcatcaaccaatatattaaaggtatacatatcagggttgatgttttccaatgtcattttattgaa |
29834789 |
T |
|
| Q |
393 |
caaacgaatagcatctttcaatcgacccacaatacaaaa |
431 |
Q |
| |
|
||||| ||| |||||||||||| ||| ||||| ||||| |
|
|
| T |
29834788 |
caaaccaattgcatctttcaatttaccaacaatgcaaaa |
29834750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 193 - 431
Target Start/End: Complemental strand, 29866422 - 29866184
Alignment:
| Q |
193 |
gccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacac |
292 |
Q |
| |
|
||||| ||| |||||||||| | | |||| ||||| ||||| | ||| |||| ||||||| ||||||| | |||||| ||||| | ||| || ||| |
|
|
| T |
29866422 |
gccttattcacttttttaactaggcaatatccatccattaaagcgctataagtaacaacattgggtttcatgccttgtttcatcatcatagctaacacat |
29866323 |
T |
|
| Q |
293 |
ttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaa |
392 |
Q |
| |
|
|| ||||| |||||| | ||||||||||| || |||| | |||||||||||| || | | || ||||| ||||||| |||| |||||| ||| || |
|
|
| T |
29866322 |
ttttagcttctttcatttttccttccttacaaaatgcatcaaccaatatattaaaggtatacatatcagggttgatgttttccaatgtcattttattgaa |
29866223 |
T |
|
| Q |
393 |
caaacgaatagcatctttcaatcgacccacaatacaaaa |
431 |
Q |
| |
|
||||| ||| |||||||||||| ||| ||||| ||||| |
|
|
| T |
29866222 |
caaaccaattgcatctttcaatttaccaacaatgcaaaa |
29866184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 406 - 538
Target Start/End: Complemental strand, 30134721 - 30134592
Alignment:
| Q |
406 |
tctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcat |
505 |
Q |
| |
|
||||| ||| ||||| |||| ||||| || | || |||||||||||| | |||||||||||| ||||| |||| || ||||||| |||| | ||||| |
|
|
| T |
30134721 |
tcttttaattgacccgcaatgcaaaatccgtgtactagagtattataggttacaacatcaggagaaattttctt---aatcatttcagaatataaatcat |
30134625 |
T |
|
| Q |
506 |
acgcatcaactacaagtttatctttgcaaagac |
538 |
Q |
| |
|
| ||||||| ||| || |||||||| ||||||| |
|
|
| T |
30134624 |
aagcatcaattacgagcttatctttacaaagac |
30134592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 30135048 - 30134986
Alignment:
| Q |
43 |
tcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccatttta |
105 |
Q |
| |
|
||||||||||| |||||| | |||||||| || |||||| |||| |||||||| ||||||||| |
|
|
| T |
30135048 |
tcaggagtcattcttttggaatgcatttcgtttaagagattcacggcttcatcaaccatttta |
30134986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 548
Target Start/End: Complemental strand, 17171872 - 17171795
Alignment:
| Q |
471 |
aattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatctttgcaaagacgattaataat |
548 |
Q |
| |
|
||||||||||| |||||| ||| |||| | |||| | ||||| |||||||||| ||||||||||||| || |||||| |
|
|
| T |
17171872 |
aattctcttgagaaccatctcaaaatataaatcaatcacatcatctacaagtttctctttgcaaagacaatcaataat |
17171795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 29 - 533
Target Start/End: Original strand, 44262655 - 44263159
Alignment:
| Q |
29 |
tgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcat |
128 |
Q |
| |
|
|||||||||||||||| |||| ||| |||| | ||||| |||||| |||||| | || ||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
44262655 |
tgtatgttatagtatcgggagccatgttttttatttgcagttctttgaagagattgacggcttcatccaccatttttttcttacacaatccattaatcat |
44262754 |
T |
|
| Q |
129 |
tatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatct |
228 |
Q |
| |
|
| | ||||||| ||| | | ||||||| || |||| |||| |||||||| |||| | ||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
44262755 |
aacactgtagctttgaacactaggaatcactccacttcgagcaatagtgttgaatacatatgtggccttgttcacttctttaaccaagaaatacccatcc |
44262854 |
T |
|
| Q |
229 |
attaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaac |
328 |
Q |
| |
|
|| || ||| || |||| | || |||||| | ||||| |||||||||||||||||| || ||| || ||||| ||| || || |||||||||||||||| |
|
|
| T |
44262855 |
atcaaagaaatataagtaaaaatatcaggatccacaccttgttttatcataacagctaacacatttctagcttgtttaacttctccttccttacataaac |
44262954 |
T |
|
| Q |
329 |
catcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaataca |
428 |
Q |
| |
|
|||| | |||| |||||||| | ||||| || ||||||||||| ||||| ||| ||||||| || || ||||| ||| ||||||||||||| |
|
|
| T |
44262955 |
catcaaccaatgtattaaaagtttgaacatccaggctgatgtttttcaacaacatttgatttaacaaaccaactgcttctttaaattgacccacaataca |
44263054 |
T |
|
| Q |
429 |
aaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatct |
528 |
Q |
| |
|
||| |||| |||||||||| |||| | ||||||||| ||||||||||||||||||| ||||||| || | | | || | ||||||| || |||||||| | |
|
|
| T |
44263055 |
aaagccatgtattagagtagtataagtgacaacatccggaaaaattctcttgacaatcatttcagaacataaagcagaggcatcaattataagtttattt |
44263154 |
T |
|
| Q |
529 |
ttgca |
533 |
Q |
| |
|
||||| |
|
|
| T |
44263155 |
ttgca |
44263159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0110
Description:
Target: scaffold0110; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 29 - 530
Target Start/End: Original strand, 43931 - 44432
Alignment:
| Q |
29 |
tgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcat |
128 |
Q |
| |
|
||||||||| ||| | |||| |||| ||||| | ||||||||||| |||||| | || |||||||||||||||||| ||| | ||||| |||||||| |
|
|
| T |
43931 |
tgtatgttacagtgttaggaaccatatttttggaatgcatttctttgaagagattaactgcttcatccaccattttattcttgcaaaatccgttaatcat |
44030 |
T |
|
| Q |
129 |
tatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatct |
228 |
Q |
| |
|
| | ||||||| ||| ||||| | ||||||| || ||| |||| |||||||| |||| | ||||||||| ||| ||||||| ||||| ||||||| |
|
|
| T |
44031 |
aacactgtagctctgaacatcaagagccactccccttctagcaatagtgttgaatacatatgtggccttgttcacttctttaaccgagaaacacccatcc |
44130 |
T |
|
| Q |
229 |
attaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaac |
328 |
Q |
| |
|
||||| |||||| |||| ||| || |||| ||| | |||||||||||||||||| || ||| || ||||| |||||| || || |||||||||||| |
|
|
| T |
44131 |
attaaagaactataagtagcaatattgggttccacgccttgttttatcataacagccaacacatttctagcttttttcacctctccatccttacataaaa |
44230 |
T |
|
| Q |
329 |
catcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaataca |
428 |
Q |
| |
|
|||| ||||| ||| |||| | ||||||| |||| | ||||||||| ||||| ||| ||||||| || || ||||||| | |||||| |||| | |
|
|
| T |
44231 |
catcaatcaaaatactaaaggtgtaaacattggggttgacgtttttcaacgtcattcgatttaacaaaccaactgcttctttcatttgacccaaaataga |
44330 |
T |
|
| Q |
429 |
aaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatct |
528 |
Q |
| |
|
||||||||||||||||||||| || | || |||||||| ||||| |||| |||| ||||||| |||| | ||||||| ||||| ||||| |||||| |
|
|
| T |
44331 |
aaaaccatatattagagtattgtaagtgatggcatcaggataaattttcttaacaatcatttcagaatataaatcatacccatcactaacaagcttatct |
44430 |
T |
|
| Q |
529 |
tt |
530 |
Q |
| |
|
|| |
|
|
| T |
44431 |
tt |
44432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 631 - 713
Target Start/End: Original strand, 44530 - 44612
Alignment:
| Q |
631 |
ccggatttacataacccgttgatcaacgttccataactaacattatcaagacgaaaccccttagctataacatcgtcatgaaa |
713 |
Q |
| |
|
|||||||||||||| ||||||||||| || ||||||||||| | || |||| ||| ||||| ||||||||||||| |||||| |
|
|
| T |
44530 |
ccggatttacataatccgttgatcaaggtcccataactaacctcattaagataaaatccctttgctataacatcgttatgaaa |
44612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 64; Significance: 1e-27; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 29 - 348
Target Start/End: Complemental strand, 24226757 - 24226438
Alignment:
| Q |
29 |
tgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcat |
128 |
Q |
| |
|
|||||| || ||| |||||| |||| ||||| | ||||||||||| || ||| | | |||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
24226757 |
tgtatgctacagtgtcaggaaccatatttttggaatgcatttctttgaaaagatttgcggcttcatccaccattttattcttacataatccattaatcat |
24226658 |
T |
|
| Q |
129 |
tatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatct |
228 |
Q |
| |
|
| ||||||||||||| || | |||| |||| || ||| |||| |||||||| | | | |||||||| ||| ||||||||||||||||||||| |
|
|
| T |
24226657 |
gactttgtagctacgaacattaggagtcattccccttagagaaatagtgttgaataactgtttggccttgttgacttctttaaccaagaaatacccatcc |
24226558 |
T |
|
| Q |
229 |
attaaggaactacaagttacaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaac |
328 |
Q |
| |
|
|| || ||| || |||| |||| || ||||| ||||| |||||||||||||| ||| || ||| || ||||| ||| || || || ||||||||||| | |
|
|
| T |
24226557 |
atcaaagaattataagtaacaatattaggttccacacgttgttttatcataatagccaacacatttctagcttttttgacctctccatccttacataacc |
24226458 |
T |
|
| Q |
329 |
catcgatcaatatattaaaa |
348 |
Q |
| |
|
|||||| |||| || ||||| |
|
|
| T |
24226457 |
catcgaccaatgtagtaaaa |
24226438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 533
Target Start/End: Original strand, 24219635 - 24219801
Alignment:
| Q |
367 |
atgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcag |
466 |
Q |
| |
|
||||||| |||| |||||| || ||||||| ||| |||||||||||| |||||| ||| || |||||| | |||| ||||||||| | ||||||| || |
|
|
| T |
24219635 |
atgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagtag |
24219734 |
T |
|
| Q |
467 |
gaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatctttgca |
533 |
Q |
| |
|
|| |||||||||| ||||||||||| |||| | |||| | ||||| ||||||||||||||||| |
|
|
| T |
24219735 |
gacaaattctcttagcaaccatttcagaatagaaatcaaaagcatcgttaacaagtttatctttgca |
24219801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 313 - 445
Target Start/End: Complemental strand, 16350703 - 16350571
Alignment:
| Q |
313 |
ccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttca |
412 |
Q |
| |
|
||||||||||| | | |||| | ||||||||||||| || || ||| |||| |||||||||| | |||||||||||||||||||| |||||||| | |
|
|
| T |
16350703 |
ccttccttacaaagagcatcaaccaatatattaaaagtataagcatctgggttgatgtttttcattaccatttcattaaacaaacgaaatgcatctttga |
16350604 |
T |
|
| Q |
413 |
atcgacccacaatacaaaaaccatatattagag |
445 |
Q |
| |
|
|| ||| ||||||||||| ||||| ||||||| |
|
|
| T |
16350603 |
atttaccaacaatacaaaatccatagattagag |
16350571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 633 - 713
Target Start/End: Complemental strand, 24226041 - 24225961
Alignment:
| Q |
633 |
ggatttacataacccgttgatcaacgttccataactaacattatcaagacgaaaccccttagctataacatcgtcatgaaa |
713 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||| || ||| |||| ||||| |||||||||| |||||||| |
|
|
| T |
24226041 |
ggatttacataacccgttgatcaatgtcccataactaacatgattcagatgaaatccctttgctataacatgatcatgaaa |
24225961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 24219332 - 24219454
Alignment:
| Q |
64 |
tgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagctacgaagatcaattgtcactccct |
163 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||| ||||| |||||| ||||||| ||| |||| ||| ||| ||| | |||||| |
|
|
| T |
24219332 |
tgcatttcttcaaagagtttcatggcttcatccaccattttaatcttacaaaatccactaatcatgatactgtaactatgaacgtcaggagccactccaa |
24219431 |
T |
|
| Q |
164 |
tttgagccatagcgttgaatata |
186 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
24219432 |
tttgagccatagtgttgaatata |
24219454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 63; Significance: 5e-27; HSPs: 4)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 296 - 530
Target Start/End: Complemental strand, 137044 - 136810
Alignment:
| Q |
296 |
tagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaa |
395 |
Q |
| |
|
||||||||||||||| |||||||| || | | |||| | ||||||||||||| || || |||| |||| |||||||||||| ||||| || ||||| |
|
|
| T |
137044 |
tagctcctttcacatttccttccttgcaaagagcatcaaccaatatattaaaagtataatcatttgggttgatgtttttcaataccatttgatggaacaa |
136945 |
T |
|
| Q |
396 |
acgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaa |
495 |
Q |
| |
|
|| || || |||||||||||||| ||||| ||||| ||||| ||||||| ||| | | ||||||||||||| ||||| |||| ||| ||||||| || |
|
|
| T |
136944 |
accaaatgcttctttcaatcgaccaacaatgcaaaatccatagattagagaattgaaagtgacaacatcaggagaaattgtctttgcaatcatttcagaa |
136845 |
T |
|
| Q |
496 |
tacagatcatacgcatcaactacaagtttatcttt |
530 |
Q |
| |
|
|| | ||||| ||||||| ||||||||||||||| |
|
|
| T |
136844 |
tataactcataagcatcaattacaagtttatcttt |
136810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 296 - 530
Target Start/End: Complemental strand, 139968 - 139734
Alignment:
| Q |
296 |
tagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaa |
395 |
Q |
| |
|
||||| |||||||||| ||||| ||||| | | |||| | ||||||||||||| || |||||| ||| |||||||||||| |||||||| ||||| |
|
|
| T |
139968 |
tagctactttcacatctccttctttacaaagagcatcaaccaatatattaaaagtataaacatctcggttgatgtttttcaataccatttcatggaacaa |
139869 |
T |
|
| Q |
396 |
acgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaa |
495 |
Q |
| |
|
||||| |||||||| ||| |||| ||||||||||| ||||| ||||||| | | | | ||||||||||||| ||||| |||| ||| ||||||| || |
|
|
| T |
139868 |
acgaaatgcatctttgaattgaccaacaatacaaaatccatagattagagaactgaaagtgacaacatcaggataaattttctttgcaatcatttcagaa |
139769 |
T |
|
| Q |
496 |
tacagatcatacgcatcaactacaagtttatcttt |
530 |
Q |
| |
|
|| | |||| ||||||| ||| | ||||||||| |
|
|
| T |
139768 |
tataacccataggcatcaagtaccaatttatcttt |
139734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 533
Target Start/End: Original strand, 105067 - 105304
Alignment:
| Q |
296 |
tagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaa |
395 |
Q |
| |
|
|||||||||||||||| ||||||||||| | | |||| | ||||||||||||| || | |||| |||| |||||||||||| ||||| || | ||| |
|
|
| T |
105067 |
tagctcctttcacatctccttccttacaaagagcatcaaccaatatattaaaagtatacacatctgggttgatgtttttcaataccatttgatggaccaa |
105166 |
T |
|
| Q |
396 |
acgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaa |
495 |
Q |
| |
|
|| || || ||||||||| |||| ||||| ||||| ||||| ||||||| | || | | ||||||| |||| ||||| |||| || ||||||| | |
|
|
| T |
105167 |
accaaatgcttctttcaattgaccaacaatgcaaaacccataaattagagcactaaaagtgacaacagtaggagaaattttctttgtaatcatttcagag |
105266 |
T |
|
| Q |
496 |
tacagatcatacgcatcaactacaagtttatctttgca |
533 |
Q |
| |
|
|| | ||||| |||||| |||||||||||||||||| |
|
|
| T |
105267 |
tataactcatatgcatcacttacaagtttatctttgca |
105304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 137275 - 137200
Alignment:
| Q |
65 |
gcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagct |
140 |
Q |
| |
|
||||||| ||||||||| ||| |||||||| ||||||||| ||||| |||||||||||||| ||||| ||||| |
|
|
| T |
137275 |
gcatttcattaaagagactcaaagcttcattgaccattttaatcttacagaatccattaatcatgatattatagct |
137200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 248 - 497
Target Start/End: Original strand, 13093789 - 13094038
Alignment:
| Q |
248 |
caacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaa |
347 |
Q |
| |
|
||||||| |||| |||||||||| |||||||||||| |||||| ||| |||||||| ||| | ||||||||||||||||| ||| ||| ||| || |
|
|
| T |
13093789 |
caacatctggttccacactttgtcatatcataacagctaaaacatacttaggtcctttcatatctctttccttacataaaccattgattaattcattgaa |
13093888 |
T |
|
| Q |
348 |
actacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagta |
447 |
Q |
| |
|
|| |||||| ||||| ||||||||||| |||||| | ||||||| ||| || | ||||||| ||||| |||||||||| ||||||||||| ||| |
|
|
| T |
13093889 |
ggtataaacatcagggttgatgtttttcaaaaccatttcggtgaacaaactaatggcttgtttcaattgacccgcaatacaaaagccatatattagtgta |
13093988 |
T |
|
| Q |
448 |
ttatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaata |
497 |
Q |
| |
|
||| | |||||||| | | ||||| ||||||||||||||||| |||| |
|
|
| T |
13093989 |
gtatgagtgacaacattatgtaaaatattcttgacaaccatttcagaata |
13094038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 3642937 - 3642862
Alignment:
| Q |
66 |
catttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagcta |
141 |
Q |
| |
|
|||||| ||||||||| | | |||||||| ||||||||| ||||| |||||||||||||||||||| |||||| |
|
|
| T |
3642937 |
catttccttaaagagacttaaggcttcatcgaccattttaatcttacccaatccattaatcattatattatagcta |
3642862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 64 - 497
Target Start/End: Original strand, 15062973 - 15063406
Alignment:
| Q |
64 |
tgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagctacgaagatcaattgtcactccct |
163 |
Q |
| |
|
|||||||||| |||||| ||| |||||||| ||||||||| ||||| |||||||||||||| ||| ||||||| | || ||| || |||||| |
|
|
| T |
15062973 |
tgcatttcttcaaagagcttcatggcttcatctaccattttaatcttacaaaatccattaatcatgatactgtagctccaaacgtcaggagttactcccc |
15063072 |
T |
|
| Q |
164 |
tttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatcaggtttcac |
263 |
Q |
| |
|
||||||||||| ||||||||| | | ||||||||| ||| |||||| ||| |||| ||||| ||||| || || |||| ||||||||| |||| || |
|
|
| T |
15063073 |
tttgagccataacgttgaataaactcttggccttgttcacttgtttaactaagcaatatccatccattaaagagttataagtaacaacatcaagttttac |
15063172 |
T |
|
| Q |
264 |
actttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattaggg |
363 |
Q |
| |
|
||| ||| ||||| ||||| || ||| || ||||| || |||| | ||||||||||| |||||||| ||||||||| ||||| || | ||||| || |
|
|
| T |
15063173 |
gttttttttcatcatcacagctaacacatttttagcttctctcacctttccttccttacaaaaaccatcaatcaatatactaaaagtatacacattcgga |
15063272 |
T |
|
| Q |
364 |
tcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacat |
463 |
Q |
| |
|
| |||||| | | || ||||| |||||||||| || ||||| ||||||| ||| |||| ||||| ||| |||| || | |||| | ||| |||| |
|
|
| T |
15063273 |
ttaatgttgtccgatatcattctattaaacaaatcaacagcatatttcaatttaccaacaacgcaaaagccactaattaaagaactataagtgactacat |
15063372 |
T |
|
| Q |
464 |
caggaaaaattctcttgacaaccatttcacaata |
497 |
Q |
| |
|
||||| ||||||| || ||||||||||||||| |
|
|
| T |
15063373 |
caggagaaattcttttagaaaccatttcacaata |
15063406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 155 - 303
Target Start/End: Original strand, 32760415 - 32760563
Alignment:
| Q |
155 |
tcactcccttttgagccatagcgttgaatatatatctagccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatc |
254 |
Q |
| |
|
|||||||| || |||| |||| ||| |||| |||| | | ||||||| ||| |||||||||||||||||||| | || ||| || || | |||||||| |
|
|
| T |
32760415 |
tcactccccttcgagcaatagtgttaaatacatatttggtcttgttcacttccttaaccaagaaatacccatccgtcaaagaattataaatgacaacatc |
32760514 |
T |
|
| Q |
255 |
aggtttcacactttgttttatcataacagcgaaaacacttatagctcct |
303 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
32760515 |
tcgttttgcactttgttttatcataacagtcaaaacacttttagctcct |
32760563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0308 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0308
Description:
Target: scaffold0308; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 256 - 445
Target Start/End: Complemental strand, 8705 - 8516
Alignment:
| Q |
256 |
ggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaa |
355 |
Q |
| |
|
|||||||||| |||||| | ||| | ||| || ||| || ||||| |||||| | ||||||||||| | | |||| | ||||||||||||| || ||| |
|
|
| T |
8705 |
ggtttcacaccttgtttcaccatcatagctaacacatttttagcttctttcatttttccttccttacagagagcatcaaccaatatattaaaagtataaa |
8606 |
T |
|
| Q |
356 |
cattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagag |
445 |
Q |
| |
|
|||| |||| |||||||||||| ||||||||| |||||||||| |||||||| ||| |||| ||||||||||| ||||| ||||||| |
|
|
| T |
8605 |
catttgggttgatgtttttcaataccatttcattgaacaaacgaaatgcatctttgaattgaccaacaatacaaaatccatagattagag |
8516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 353 - 533
Target Start/End: Complemental strand, 10129750 - 10129570
Alignment:
| Q |
353 |
aaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattata |
452 |
Q |
| |
|
||||||| |||| |||||||| |||| |||||| || ||||||| ||| |||||||||||| ||||||||| ||||| ||| |||| | ||||||| |
|
|
| T |
10129750 |
aaacatttgggttaatgttttccaatatcattttatgcaacaaaccaattgcatctttcaattgacccacaacgcaaaagccactaattaaattattata |
10129651 |
T |
|
| Q |
453 |
cgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatctttgca |
533 |
Q |
| |
|
| |||||||||||||||||||||||| | | ||||||| |||| | || | | |||||| ||||||||||||||||| |
|
|
| T |
10129650 |
agtgacaacatcaggaaaaattctcttagcgatcatttcagaatataaattaaaagcatcattaacaagtttatctttgca |
10129570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 313 - 530
Target Start/End: Complemental strand, 17250966 - 17250749
Alignment:
| Q |
313 |
ccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttca |
412 |
Q |
| |
|
|||||||||||||||||||| | |||| ||||||| ||||||||||||||| | ||||||||| ||||||||| ||||| | || || | | || |
|
|
| T |
17250966 |
ccttccttacataaaccatcaaccaatgtattaaacgtacaaacattagggtttacgtttttcaacaccatttcatttaacaatccaaacgctttatcca |
17250867 |
T |
|
| Q |
413 |
atcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatc |
512 |
Q |
| |
|
|| |||||||||| ||||| |||||||| | | | | || | ||||||| |||||||| ||||| ||| |||||||||||| | |||| ||||||| |
|
|
| T |
17250866 |
attgacccacaatgcaaaacccatatatcaaactcgtgtaagtaacaacattaggaaaaaccctcttctcaaacatttcacaatataaatcaaacgcatc |
17250767 |
T |
|
| Q |
513 |
aactacaagtttatcttt |
530 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
17250766 |
cctcacaagtttatcttt |
17250749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 361 - 530
Target Start/End: Complemental strand, 41315874 - 41315705
Alignment:
| Q |
361 |
gggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaa |
460 |
Q |
| |
|
|||| ||||||||||||| ||||| | | ||||||| || |||||||||||| |||| | ||| ||||| ||||||||||||| ||| | | | ||| |
|
|
| T |
41315874 |
gggttaatgtttttcaataccatttgactgaacaaaccaaatgcatctttcaattgaccaataatgcaaaatccatatattagagaattgaaagtggcaa |
41315775 |
T |
|
| Q |
461 |
catcaggaaaaattctcttgacaaccatttcacaatacagatcatacgcatcaactacaagtttatcttt |
530 |
Q |
| |
|
|||||||| ||||| ||| ||| ||||||| |||| | ||||| |||||| |||||| |||||||| |
|
|
| T |
41315774 |
catcaggagaaattttctctgcaatcatttcagaatataactcataagcatcatttacaagcttatcttt |
41315705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 10130040 - 10129966
Alignment:
| Q |
63 |
ttgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgta |
137 |
Q |
| |
|
|||||||||||| |||||| | ||||||||||||||||||| ||||| |||||||||||||| ||| |||| |
|
|
| T |
10130040 |
ttgcatttctttgaagagatcaatagcttcatccaccattttaatcttacaaaatccattaatcatgatactgta |
10129966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 247 - 479
Target Start/End: Original strand, 126403 - 126635
Alignment:
| Q |
247 |
acaacatcaggtttcacactttgttttatcataacagcgaaaacacttatagctcctttcacatcaccttccttacataaaccatcgatcaatatattaa |
346 |
Q |
| |
|
|||||||| || |||||| || ||| ||||| ||||| | |||||| ||||| |||||| | ||||||||||||| | |||| | || |||||||| |
|
|
| T |
126403 |
acaacatcgggcatcacacattctttcatcatcacagctatcacacttttagcttctttcatctttccttccttacatagagcatcaaccattatattaa |
126502 |
T |
|
| Q |
347 |
aactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagt |
446 |
Q |
| |
|
|| || |||||| |||| |||||||||||| ||||||| |||||||||| |||||||| ||| |||| ||||||||||| ||||| ||||||| |
|
|
| T |
126503 |
aagtataaacatctgggttgatgtttttcaatactatttcatggaacaaacgaaacgcatctttgaattgaccaacaatacaaaatccataaattagaga |
126602 |
T |
|
| Q |
447 |
attatacgcgacaacatcaggaaaaattctctt |
479 |
Q |
| |
|
||| | | |||||||| ||| |||||||||| |
|
|
| T |
126603 |
attgaaagtgacaacattgggagaaattctctt |
126635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0654 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0654
Description:
Target: scaffold0654; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 313 - 479
Target Start/End: Original strand, 1566 - 1732
Alignment:
| Q |
313 |
ccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttca |
412 |
Q |
| |
|
||||||||||| ||| |||||| ||||||||||||| || | |||| ||||| |||||||||||| |||||| | |||||||| || || ||||||| |
|
|
| T |
1566 |
ccttccttacaaaaagcatcgaccaatatattaaaagtatacacatcagggttgatgtttttcaataccatttcgtgaaacaaaccaaatgcttctttca |
1665 |
T |
|
| Q |
413 |
atcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctctt |
479 |
Q |
| |
|
| |||| ||||| ||||| ||||| || |||| | || | | ||||||||| ||| |||||||||| |
|
|
| T |
1666 |
gttgaccaacaatgcaaaatccataaatcagagcactaaaagtgacaacatcgggagaaattctctt |
1732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0429 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0429
Description:
Target: scaffold0429; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 296 - 490
Target Start/End: Complemental strand, 5866 - 5672
Alignment:
| Q |
296 |
tagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaa |
395 |
Q |
| |
|
|||||||||||| || ||||||||||| | | |||| | ||||||||||||| || | ||||| |||| |||||||||||| |||||||| ||||| |
|
|
| T |
5866 |
tagctcctttcagatttccttccttacaaagagcatcaaccaatatattaaaagtatacacatttgggttgatgtttttcaataccatttcatggaacaa |
5767 |
T |
|
| Q |
396 |
acgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccattt |
490 |
Q |
| |
|
|| || || ||| ||||| |||| ||||| ||||| ||||| |||| || ||| | | ||||||||||||| ||||| |||| |||| ||||| |
|
|
| T |
5766 |
accaaatgcttctatcaattgaccaacaatgcaaaatccatagattaaagaattgaaagtgacaacatcaggagaaattttctttacaatcattt |
5672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 296 - 490
Target Start/End: Original strand, 43616 - 43810
Alignment:
| Q |
296 |
tagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaa |
395 |
Q |
| |
|
||||||||||||||| ||||||||||| | | |||| | ||||||||||||| || | ||||| |||| |||||||||||| |||||||| ||||| |
|
|
| T |
43616 |
tagctcctttcacatttccttccttacaaagagcatcaaccaatatattaaaagtatacacatttgggttgatgtttttcaataccatttcatggaacaa |
43715 |
T |
|
| Q |
396 |
acgaatagcatctttcaatcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccattt |
490 |
Q |
| |
|
|| || || ||| ||||| |||| |||| ||||| ||||| |||| || ||| | | ||||||||||||| ||||| |||| |||| ||||| |
|
|
| T |
43716 |
accaaatgcttctatcaattgaccaacaaagcaaaatccatagattaaagaattgaaagtgacaacatcaggagaaattttctttacaatcattt |
43810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 295 - 445
Target Start/End: Original strand, 50832 - 50982
Alignment:
| Q |
295 |
atagctcctttcacatcaccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaaca |
394 |
Q |
| |
|
|||||||||||||||| ||||||||||| | | |||| | ||||||||||||| || ||||||| |||| |||||| ||||| |||||||| |||| |
|
|
| T |
50832 |
atagctcctttcacatttccttccttacaaagagcatcaaccaatatattaaaagtataaacatttgggtggatgtttgtcaatagcatttcatggaaca |
50931 |
T |
|
| Q |
395 |
aacgaatagcatctttcaatcgacccacaatacaaaaaccatatattagag |
445 |
Q |
| |
|
||| || || | ||||| | |||| ||||| ||||| ||||||||||||| |
|
|
| T |
50932 |
aacaaaatgcttttttcagttgaccaacaatgcaaaatccatatattagag |
50982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0177 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0177
Description:
Target: scaffold0177; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 490
Target Start/End: Complemental strand, 27007 - 26830
Alignment:
| Q |
313 |
ccttccttacataaaccatcgatcaatatattaaaactacaaacattagggtcaatgtttttcaatctcatttcattaaacaaacgaatagcatctttca |
412 |
Q |
| |
|
||||||||||| | | |||||| ||||||||| ||| ||||||||| ||||| |||||| ||||| |||||||| ||||||| || || ||||| | |
|
|
| T |
27007 |
ccttccttacaaagagcatcgaccaatatattgaaagtacaaacatcagggttgatgtttgtcaataccatttcatggaacaaaccaaatgcttctttga |
26908 |
T |
|
| Q |
413 |
atcgacccacaatacaaaaaccatatattagagtattatacgcgacaacatcaggaaaaattctcttgacaaccattt |
490 |
Q |
| |
|
|| |||| || || ||||| ||||| ||||||| | || | | |||||||||||| ||| | |||| |||| ||||| |
|
|
| T |
26907 |
attgaccaaccatgcaaaatccatagattagagcactaaaagttacaacatcaggagaaactttctttacaatcattt |
26830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0237 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0237
Description:
Target: scaffold0237; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 22245 - 22169
Alignment:
| Q |
64 |
tgcatttctttaaagagaatcacagcttcatccaccattttagccttacttaatccattaatcattatattgtagct |
140 |
Q |
| |
|
||||||||||| || || ||| |||||||||||||||||| ||||| |||||||||||||| ||||||||||| |
|
|
| T |
22245 |
tgcatttctttgaaaagtttcatggcttcatccaccattttaatcttacaaaatccattaatcatgatattgtagct |
22169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 260
Target Start/End: Original strand, 53717 - 53889
Alignment:
| Q |
88 |
gcttcatccaccattttagccttacttaatccattaatcattatattgtagctacgaagatcaattgtcactcccttttgagccatagcgttgaatatat |
187 |
Q |
| |
|
|||| ||||||| ||||| ||||| |||||||||||||| |||||||||||| ||| || | ||||||||| | |||| ||||| ||||||||| | |
|
|
| T |
53717 |
gctttatccacctttttaatcttacaaaatccattaatcatgatattgtagctatgaacattagcagtcactcccctctgagacatagtgttgaatatct |
53816 |
T |
|
| Q |
188 |
atctagccttgttcgcttttttaaccaagaaatacccatctattaaggaactacaagttacaacatcaggttt |
260 |
Q |
| |
|
||||||| ||| ||| |||||| | | |||| ||||| ||||| || | | |||| ||||||| |||||| |
|
|
| T |
53817 |
tcttagccttattcacttgtttaactaggcaatatccatccattaaagagcaataagtaacaacattaggttt |
53889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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