View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18687_low_1 (Length: 731)

Name: NF18687_low_1
Description: NF18687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18687_low_1
NF18687_low_1
[»] chr7 (71 HSPs)
chr7 (310-725)||(40811152-40811546)
chr7 (314-537)||(47454335-47454557)
chr7 (322-521)||(32255003-32255204)
chr7 (325-542)||(43459448-43459664)
chr7 (322-534)||(43460725-43460938)
chr7 (314-542)||(47456278-47456498)
chr7 (326-537)||(32256304-32256513)
chr7 (322-538)||(6173356-6173569)
chr7 (322-537)||(40509637-40509852)
chr7 (376-543)||(41078748-41078915)
chr7 (334-527)||(41079751-41079942)
chr7 (296-536)||(40508377-40508618)
chr7 (290-537)||(47059106-47059357)
chr7 (405-536)||(45455358-45455489)
chr7 (322-537)||(22115067-22115283)
chr7 (425-538)||(33096866-33096979)
chr7 (313-535)||(24282871-24283091)
chr7 (325-509)||(11501206-11501389)
chr7 (322-537)||(4299951-4300166)
chr7 (425-538)||(30310118-30310231)
chr7 (425-538)||(32602930-32603043)
chr7 (425-538)||(45454035-45454148)
chr7 (339-509)||(22538769-22538938)
chr7 (446-537)||(30311496-30311587)
chr7 (331-499)||(13564150-13564319)
chr7 (314-387)||(22691116-22691190)
chr7 (424-521)||(30333299-30333396)
chr7 (335-459)||(22337288-22337411)
chr7 (347-509)||(40812542-40812703)
chr7 (297-509)||(47060354-47060565)
chr7 (302-538)||(4298710-4298948)
chr7 (371-541)||(11502373-11502544)
chr7 (371-538)||(33779040-33779203)
chr7 (288-400)||(3413666-3413779)
chr7 (386-541)||(46835669-46835824)
chr7 (647-725)||(38857159-38857236)
chr7 (650-723)||(38857891-38857963)
chr7 (325-426)||(35295809-35295909)
chr7 (322-399)||(669292-669369)
chr7 (619-665)||(13921322-13921367)
chr7 (331-499)||(22336015-22336184)
chr7 (451-537)||(30334669-30334755)
chr7 (613-663)||(40810496-40810546)
chr7 (456-521)||(35130-35195)
chr7 (371-423)||(43441459-43441509)
chr7 (625-665)||(12210648-12210687)
chr7 (620-668)||(14101419-14101466)
chr7 (620-668)||(14411436-14411483)
chr7 (620-664)||(34139728-34139771)
chr7 (471-518)||(534118-534165)
chr7 (471-518)||(537331-537378)
chr7 (309-418)||(2414863-2414971)
chr7 (625-668)||(14102403-14102445)
chr7 (625-668)||(14412420-14412462)
chr7 (613-668)||(30846850-30846904)
chr7 (646-689)||(48590314-48590357)
chr7 (619-665)||(7039-7084)
chr7 (322-399)||(9662141-9662218)
chr7 (619-665)||(10524415-10524460)
chr7 (619-665)||(42582085-42582130)
chr7 (619-665)||(42794166-42794211)
chr7 (619-661)||(45258066-45258107)
chr7 (619-665)||(46907509-46907554)
chr7 (619-661)||(49141680-49141721)
chr7 (456-521)||(27768-27833)
chr7 (470-511)||(11344531-11344572)
chr7 (371-423)||(15992248-15992298)
chr7 (648-689)||(40810561-40810602)
chr7 (338-399)||(44554687-44554748)
chr7 (645-674)||(48589858-48589887)
chr7 (620-665)||(49140627-49140671)
[»] chr1 (55 HSPs)
chr1 (285-537)||(50444565-50444816)
chr1 (18-157)||(50444283-50444422)
chr1 (371-539)||(45584960-45585129)
chr1 (330-537)||(27814290-27814497)
chr1 (322-538)||(15072693-15072909)
chr1 (287-538)||(15232749-15233000)
chr1 (287-535)||(35943315-35943563)
chr1 (322-479)||(46110338-46110494)
chr1 (325-509)||(16963860-16964043)
chr1 (322-542)||(14470849-14471069)
chr1 (323-538)||(41873875-41874090)
chr1 (425-538)||(15071339-15071452)
chr1 (311-538)||(46111388-46111607)
chr1 (339-509)||(49802816-49802985)
chr1 (471-541)||(52627509-52627579)
chr1 (425-538)||(24499661-24499774)
chr1 (648-725)||(38633119-38633195)
chr1 (425-537)||(52628879-52628991)
chr1 (311-509)||(16965018-16965217)
chr1 (297-537)||(14477668-14477909)
chr1 (331-539)||(41872572-41872780)
chr1 (443-538)||(34351980-34352075)
chr1 (425-539)||(23091347-23091461)
chr1 (653-725)||(38632520-38632591)
chr1 (325-509)||(15233949-15234131)
chr1 (406-531)||(50442628-50442754)
chr1 (287-509)||(46467172-46467393)
chr1 (429-509)||(44278359-44278439)
chr1 (456-521)||(20069924-20069989)
chr1 (314-386)||(50442752-50442825)
chr1 (414-521)||(51042337-51042444)
chr1 (293-399)||(48527669-48527775)
chr1 (645-683)||(47586218-47586256)
chr1 (425-538)||(16123284-16123397)
chr1 (645-686)||(47585651-47585692)
chr1 (652-689)||(50268514-50268551)
chr1 (471-539)||(33369247-33369315)
chr1 (371-407)||(34350240-34350276)
chr1 (620-668)||(42290267-42290314)
chr1 (322-380)||(12665944-12666003)
chr1 (322-365)||(38280999-38281042)
chr1 (454-509)||(42244657-42244712)
chr1 (647-689)||(13535604-13535646)
chr1 (620-662)||(13761105-13761146)
chr1 (619-665)||(19914436-19914481)
chr1 (322-399)||(52078047-52078125)
chr1 (620-665)||(19915373-19915417)
chr1 (456-521)||(20064190-20064255)
chr1 (322-371)||(21507229-21507277)
chr1 (619-664)||(43011797-43011841)
chr1 (619-664)||(47652697-47652741)
chr1 (338-399)||(48492864-48492925)
chr1 (620-665)||(49429193-49429237)
chr1 (371-543)||(49801609-49801781)
chr1 (620-665)||(50036818-50036862)
[»] chr5 (33 HSPs)
chr5 (322-539)||(325089-325305)
chr5 (306-541)||(27705202-27705438)
chr5 (322-535)||(39603853-39604068)
chr5 (371-539)||(22047728-22047897)
chr5 (327-539)||(30859078-30859292)
chr5 (325-534)||(39605375-39605584)
chr5 (287-538)||(30910738-30910990)
chr5 (287-538)||(22308667-22308918)
chr5 (347-537)||(30857798-30857987)
chr5 (374-521)||(8521269-8521414)
chr5 (371-521)||(1010318-1010466)
chr5 (293-423)||(1102731-1102859)
chr5 (322-538)||(33173862-33174079)
chr5 (374-535)||(15548240-15548399)
chr5 (322-521)||(32757839-32758039)
chr5 (425-537)||(22049142-22049254)
chr5 (344-509)||(30912088-30912252)
chr5 (476-536)||(41798004-41798064)
chr5 (322-399)||(324174-324252)
chr5 (645-686)||(4906868-4906909)
chr5 (405-509)||(8523732-8523836)
chr5 (620-668)||(30192463-30192510)
chr5 (620-663)||(204477-204520)
chr5 (619-665)||(5746-5791)
chr5 (619-665)||(3891453-3891498)
chr5 (619-665)||(3892495-3892540)
chr5 (651-689)||(17047010-17047048)
chr5 (619-665)||(30711218-30711263)
chr5 (620-665)||(8539574-8539618)
chr5 (466-535)||(11262256-11262325)
chr5 (620-665)||(11348533-11348577)
chr5 (322-363)||(20539249-20539290)
chr5 (452-509)||(26047839-26047896)
[»] chr3 (60 HSPs)
chr3 (285-538)||(18197144-18197389)
chr3 (18-157)||(18197534-18197673)
chr3 (325-538)||(40244184-40244395)
chr3 (371-538)||(38242468-38242635)
chr3 (322-539)||(53624266-53624481)
chr3 (325-538)||(38240903-38241114)
chr3 (325-537)||(34818084-34818295)
chr3 (322-537)||(12107882-12108101)
chr3 (371-538)||(53622659-53622827)
chr3 (373-499)||(10732083-10732209)
chr3 (297-512)||(42684899-42685114)
chr3 (371-539)||(3208480-3208648)
chr3 (425-538)||(50810840-50810953)
chr3 (425-538)||(50864911-50865024)
chr3 (423-539)||(36176510-36176627)
chr3 (336-510)||(40745384-40745557)
chr3 (325-509)||(35372066-35372248)
chr3 (425-544)||(37735297-37735416)
chr3 (425-539)||(53187555-53187668)
chr3 (469-538)||(3209981-3210050)
chr3 (335-509)||(27837946-27838118)
chr3 (427-540)||(37736089-37736202)
chr3 (425-538)||(50809418-50809531)
chr3 (425-538)||(50866331-50866444)
chr3 (317-538)||(53194769-53194989)
chr3 (425-534)||(18458663-18458772)
chr3 (371-509)||(3455577-3455715)
chr3 (287-509)||(26886298-26886520)
chr3 (311-422)||(35371020-35371132)
chr3 (325-399)||(3209873-3209948)
chr3 (322-542)||(24403232-24403452)
chr3 (325-537)||(53420317-53420527)
chr3 (371-536)||(34819237-34819401)
chr3 (321-464)||(10730956-10731098)
chr3 (425-538)||(40364316-40364429)
chr3 (325-538)||(41263635-41263847)
chr3 (287-509)||(41264521-41264743)
chr3 (442-532)||(18442255-18442345)
chr3 (442-532)||(19487329-19487419)
chr3 (312-399)||(7270458-7270546)
chr3 (423-534)||(23443461-23443572)
chr3 (371-541)||(53614225-53614395)
chr3 (472-538)||(12105287-12105353)
chr3 (619-665)||(19988429-19988474)
chr3 (619-665)||(50998738-50998783)
chr3 (648-689)||(18745948-18745989)
chr3 (287-399)||(21074148-21074261)
chr3 (649-686)||(40871179-40871216)
chr3 (460-512)||(8796354-8796406)
chr3 (312-372)||(40892319-40892379)
chr3 (626-665)||(4330769-4330807)
chr3 (625-668)||(7942060-7942102)
chr3 (425-540)||(53421767-53421882)
chr3 (478-524)||(10340028-10340074)
chr3 (619-665)||(11095142-11095187)
chr3 (619-665)||(16851096-16851141)
chr3 (619-665)||(26245305-26245350)
chr3 (620-665)||(24703473-24703517)
chr3 (327-419)||(27841617-27841710)
chr3 (425-534)||(41544663-41544772)
[»] scaffold0031 (2 HSPs)
scaffold0031 (287-536)||(125098-125350)
scaffold0031 (287-537)||(123967-124215)
[»] chr4 (71 HSPs)
chr4 (287-537)||(1794409-1794661)
chr4 (322-538)||(1587179-1587395)
chr4 (310-537)||(52239875-52240104)
chr4 (322-538)||(6348152-6348367)
chr4 (302-534)||(27850819-27851047)
chr4 (347-537)||(393566-393756)
chr4 (322-540)||(2312383-2312603)
chr4 (322-536)||(1829752-1829966)
chr4 (371-533)||(6349504-6349667)
chr4 (349-538)||(11968508-11968698)
chr4 (331-535)||(42810115-42810319)
chr4 (426-538)||(24426336-24426448)
chr4 (376-538)||(1588045-1588208)
chr4 (325-534)||(52963570-52963778)
chr4 (325-538)||(40792748-40792958)
chr4 (406-537)||(390215-390346)
chr4 (407-538)||(2310920-2311051)
chr4 (408-539)||(42871091-42871222)
chr4 (381-537)||(1188841-1188996)
chr4 (287-539)||(15449942-15450195)
chr4 (322-509)||(7707614-7707803)
chr4 (408-538)||(37882831-37882963)
chr4 (441-539)||(1831285-1831383)
chr4 (322-537)||(44503582-44503796)
chr4 (411-538)||(4128990-4129117)
chr4 (322-518)||(53432079-53432275)
chr4 (322-535)||(27847678-27847889)
chr4 (322-518)||(53435656-53435852)
chr4 (322-537)||(53205386-53205601)
chr4 (405-537)||(37884263-37884395)
chr4 (348-509)||(10168711-10168873)
chr4 (654-725)||(26933205-26933275)
chr4 (334-509)||(23203869-23204043)
chr4 (425-537)||(44501516-44501628)
chr4 (425-539)||(31968398-31968512)
chr4 (337-509)||(52241075-52241245)
chr4 (425-537)||(1190198-1190310)
chr4 (325-399)||(2311088-2311163)
chr4 (15-99)||(53701559-53701647)
chr4 (311-396)||(13165633-13165718)
chr4 (348-507)||(33232629-33232785)
chr4 (428-534)||(42872308-42872414)
chr4 (287-423)||(44498574-44498709)
chr4 (407-509)||(54866619-54866720)
chr4 (645-686)||(33409577-33409618)
chr4 (645-686)||(33410207-33410248)
chr4 (327-538)||(49343917-49344129)
chr4 (425-537)||(4871370-4871482)
chr4 (620-668)||(18884559-18884606)
chr4 (424-512)||(54485550-54485638)
chr4 (334-396)||(7708704-7708767)
chr4 (381-537)||(11438531-11438686)
chr4 (619-665)||(14201585-14201630)
chr4 (619-665)||(21022946-21022991)
chr4 (371-509)||(23201872-23202010)
chr4 (322-418)||(56085465-56085560)
chr4 (619-663)||(47153427-47153472)
chr4 (287-390)||(7053321-7053425)
chr4 (322-399)||(4714155-4714233)
chr4 (322-399)||(13533165-13533242)
chr4 (619-665)||(31242185-31242230)
chr4 (425-535)||(31965835-31965945)
chr4 (619-665)||(40833668-40833713)
chr4 (651-689)||(43210439-43210477)
chr4 (619-665)||(46253456-46253501)
chr4 (619-665)||(51037526-51037571)
chr4 (425-538)||(10167422-10167535)
chr4 (620-665)||(20208481-20208525)
chr4 (456-521)||(38698065-38698130)
chr4 (425-518)||(53204378-53204471)
chr4 (287-399)||(56000419-56000532)
[»] chr2 (44 HSPs)
chr2 (371-537)||(11317320-11317486)
chr2 (287-538)||(6030337-6030589)
chr2 (347-537)||(17460613-17460802)
chr2 (322-543)||(28562713-28562933)
chr2 (385-539)||(7437727-7437881)
chr2 (297-545)||(43033072-43033319)
chr2 (311-539)||(42641752-42641980)
chr2 (371-537)||(17459251-17459418)
chr2 (325-537)||(32470482-32470693)
chr2 (371-537)||(11547657-11547824)
chr2 (371-539)||(32469144-32469313)
chr2 (347-541)||(11315927-11316120)
chr2 (371-534)||(43034423-43034586)
chr2 (325-509)||(1083014-1083197)
chr2 (426-535)||(28561368-28561477)
chr2 (287-399)||(34513421-34513534)
chr2 (327-509)||(29219411-29219595)
chr2 (327-509)||(29332710-29332894)
chr2 (348-533)||(7436469-7436652)
chr2 (322-521)||(2277372-2277571)
chr2 (645-723)||(41566107-41566184)
chr2 (322-509)||(18616907-18617096)
chr2 (645-725)||(41565372-41565451)
chr2 (322-521)||(34147150-34147350)
chr2 (325-499)||(34464004-34464178)
chr2 (313-499)||(34512850-34513034)
chr2 (371-509)||(1085340-1085476)
chr2 (325-422)||(6028830-6028926)
chr2 (443-534)||(36010578-36010669)
chr2 (486-539)||(6028741-6028794)
chr2 (322-508)||(6032217-6032403)
chr2 (619-665)||(29074061-29074106)
chr2 (620-665)||(29947738-29947782)
chr2 (347-509)||(18615542-18615703)
chr2 (620-668)||(33222587-33222634)
chr2 (454-521)||(37956963-37957030)
chr2 (619-665)||(3086006-3086051)
chr2 (619-665)||(10424809-10424854)
chr2 (619-665)||(30803076-30803121)
chr2 (619-665)||(36510914-36510959)
chr2 (627-668)||(37322166-37322205)
chr2 (619-661)||(39951212-39951253)
chr2 (645-674)||(4286691-4286720)
chr2 (486-523)||(23233763-23233800)
[»] chr8 (54 HSPs)
chr8 (322-545)||(32798434-32798658)
chr8 (287-537)||(45281056-45281306)
chr8 (325-539)||(44076267-44076483)
chr8 (306-537)||(4810467-4810695)
chr8 (290-537)||(42870811-42871060)
chr8 (324-541)||(30786670-30786888)
chr8 (325-537)||(32693828-32694039)
chr8 (322-538)||(32695176-32695394)
chr8 (334-539)||(41629704-41629908)
chr8 (325-509)||(42100013-42100196)
chr8 (371-538)||(42872143-42872308)
chr8 (325-537)||(32797136-32797350)
chr8 (287-520)||(22551022-22551254)
chr8 (303-512)||(6397806-6398014)
chr8 (325-512)||(45279703-45279889)
chr8 (425-538)||(26696529-26696642)
chr8 (317-537)||(239424-239643)
chr8 (317-537)||(792779-792998)
chr8 (425-539)||(28420180-28420294)
chr8 (407-537)||(30787588-30787718)
chr8 (425-538)||(28418803-28418916)
chr8 (324-537)||(212618-212830)
chr8 (324-537)||(726241-726453)
chr8 (324-537)||(798742-798954)
chr8 (289-540)||(13117503-13117754)
chr8 (325-538)||(13116327-13116539)
chr8 (376-537)||(8571574-8571735)
chr8 (489-537)||(12850465-12850513)
chr8 (470-538)||(41630175-41630243)
chr8 (374-509)||(42877645-42877778)
chr8 (287-509)||(14840767-14840989)
chr8 (405-499)||(6398483-6398577)
chr8 (452-537)||(8570116-8570201)
chr8 (425-518)||(211612-211705)
chr8 (425-518)||(240551-240644)
chr8 (425-518)||(725235-725328)
chr8 (425-518)||(793906-793999)
chr8 (439-537)||(13197961-13198059)
chr8 (311-423)||(24192555-24192666)
chr8 (322-538)||(42098560-42098777)
chr8 (452-521)||(17702308-17702377)
chr8 (311-418)||(24305160-24305266)
chr8 (322-509)||(38696334-38696521)
chr8 (619-665)||(44933829-44933874)
chr8 (620-668)||(7121841-7121888)
chr8 (645-688)||(38331023-38331066)
chr8 (619-665)||(2335206-2335251)
chr8 (619-665)||(27502623-27502668)
chr8 (439-521)||(38697026-38697108)
chr8 (619-661)||(43362293-43362334)
chr8 (620-665)||(28694049-28694093)
chr8 (619-664)||(31184563-31184607)
chr8 (620-665)||(39277519-39277563)
chr8 (440-509)||(45437503-45437572)
[»] scaffold0077 (2 HSPs)
scaffold0077 (322-538)||(54086-54304)
scaffold0077 (325-531)||(52596-52801)
[»] scaffold0118 (1 HSPs)
scaffold0118 (322-521)||(43476-43677)
[»] scaffold0034 (2 HSPs)
scaffold0034 (325-538)||(109652-109864)
scaffold0034 (371-509)||(108539-108677)
[»] scaffold1152 (1 HSPs)
scaffold1152 (347-539)||(2404-2595)
[»] chr6 (29 HSPs)
chr6 (425-539)||(6452517-6452631)
chr6 (439-541)||(34023880-34023982)
chr6 (322-537)||(7311627-7311842)
chr6 (334-499)||(23397270-23397434)
chr6 (322-538)||(29381632-29381849)
chr6 (376-536)||(7310275-7310433)
chr6 (325-499)||(29380227-29380400)
chr6 (439-539)||(34024084-34024183)
chr6 (297-435)||(5187500-5187638)
chr6 (327-499)||(17837652-17837825)
chr6 (425-537)||(232174-232284)
chr6 (325-499)||(17839046-17839219)
chr6 (371-509)||(32506979-32507116)
chr6 (371-512)||(12669746-12669886)
chr6 (471-542)||(27080917-27080988)
chr6 (348-509)||(5186594-5186753)
chr6 (420-539)||(6452280-6452399)
chr6 (287-499)||(23392250-23392464)
chr6 (426-539)||(15730036-15730150)
chr6 (443-535)||(27082168-27082261)
chr6 (425-509)||(6701406-6701490)
chr6 (467-535)||(27967097-27967165)
chr6 (613-664)||(31146336-31146387)
chr6 (445-539)||(233590-233684)
chr6 (619-665)||(2109487-2109532)
chr6 (619-665)||(13164315-13164360)
chr6 (619-665)||(25554675-25554720)
chr6 (652-689)||(1189112-1189149)
chr6 (652-689)||(32616698-32616735)
[»] scaffold0201 (1 HSPs)
scaffold0201 (323-541)||(21121-21339)
[»] scaffold0078 (1 HSPs)
scaffold0078 (425-539)||(18808-18922)
[»] scaffold1251 (1 HSPs)
scaffold1251 (381-521)||(1048-1187)
[»] scaffold2071 (1 HSPs)
scaffold2071 (294-389)||(556-652)
[»] scaffold0011 (1 HSPs)
scaffold0011 (322-509)||(127459-127646)
[»] scaffold0219 (1 HSPs)
scaffold0219 (311-399)||(8083-8171)
[»] scaffold0013 (1 HSPs)
scaffold0013 (287-435)||(32671-32822)
[»] scaffold0176 (1 HSPs)
scaffold0176 (620-664)||(653-696)
[»] scaffold0019 (1 HSPs)
scaffold0019 (425-521)||(61865-61961)
[»] scaffold0016 (1 HSPs)
scaffold0016 (619-665)||(69279-69324)


Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-125; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 310 - 725
Target Start/End: Complemental strand, 40811546 - 40811152
Alignment:
Q  310 atcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggt 408  Q
    ||||||||| | |||||||||||||||| |||| || || |||||||   |||| | ||||| |||||||||||||||||||||||||||||||||||||    
T  40811546 atcttttaataaaaaagatcaaacggtttaaattaaaaatattaatagaatctatggtggaccactcttaaggttggtccaccatagacatcatttgggt 40811447  T
Q  409 taaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatt 508  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||                    |||||| |||||||||||||| ||||||||    
T  40811446 taaagttaaccgtcaggatttatttagtatacggaggaaaatatgaggga--------------------aatgtgggaccaaaatgaaaacttgaaatt 40811367  T
Q  509 atttgagggaccattggatcaaataagccttaaaattcagtaatgcaactttgccccattatgctttgaggattactgttgacacattgaagagggctaa 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  40811366 atttgagggaccattggatcaaataagccttaaaattcagtaatgcaactttgccccattatgctttgaggattgttgttgacacattgatgagggctaa 40811267  T
Q  609 gagcctaagacacaccagtaaattactcaaatgcctcctcggcagttaactgccgaaattcaatttaatccatcggcactttaagtgtcgaggaaattat 708  Q
    |||||||||||||| |||||||||||||||||| ||||||| || ||||||||| |||| ||||||||||||||||||| ||||||| ||||||||||||    
T  40811266 gagcctaagacaca-cagtaaattactcaaatgtctcctcgacaattaactgccaaaatccaatttaatccatcggcac-ttaagtgccgaggaaattat 40811169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 314 - 537
Target Start/End: Complemental strand, 47454557 - 47454335
Alignment:
Q  314 tttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaa 412  Q
    ||||||| |||| |||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||| |||||||||||  || | ||||||    
T  47454557 tttaaaaaaaaaaatcaaacggttaaaattaataaaattaataaggtctacgatggaccactcttaaggttggtctaccatagacat--ttagagttaaa 47454460  T
Q  413 gttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattattt 512  Q
    |||||  |||  ||||||||||| | ||| || ||||  |||||||||||||  || |||||||||| |||| |||||||||||||  ||||||||||||    
T  47454459 gttaatagtcgggatttatttggcaaacgaagaaaaacttgagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaagcttgaaattattt 47454360  T
Q  513 gagggaccattggatcaaataagcc 537  Q
    ||||||||| |||||||||||||||    
T  47454359 gagggaccactggatcaaataagcc 47454335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 322 - 521
Target Start/End: Complemental strand, 32255204 - 32255003
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttggg-ttaaagttaacc 419  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||||||||||||| |||||||||||| ||||| ||||||    
T  32255204 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaacc 32255105  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    |||  ||||||||||| | |||||||||||  ||||||| |||||  || |||||||||| | || ||||||||| ||||||||||||||||||||||||    
T  32255104 gtcgggatttatttggcaaacggaggaaaaagtgagggatcaaaatgtacgttttattaattatgggaccaaaataaaaatttgaaattatttgagggac 32255005  T
Q  520 ca 521  Q
    ||    
T  32255004 ca 32255003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 325 - 542
Target Start/End: Complemental strand, 43459664 - 43459448
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| || | | ||||||||| ||||||||||||||  || | |||||| ||||| | |     
T  43459664 agatcgaatggttaaaattaacaaaattaataaggtctacgatgtaccatttttaaggttgatccaccatagacat--ttggagttaaacttaacagccg 43459567  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
     ||||||||||| | ||||||||||| |||||||||  ||||  | |||||||||| |||| |||||||||||||| ||||||||||||  ||||| | |    
T  43459566 agatttatttggcaaacggaggaaaacatgagggacttaaacgcacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggactaat 43459467  T
Q  524 ggatcaaataagccttaaa 542  Q
    |||||||||||||| ||||    
T  43459466 ggatcaaataagccataaa 43459448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 43460725 - 43460938
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    ||||||||||| |||| |||| || | |||||||| | |||| | ||||| |||||||| ||||||||||||||||||| ||||| |||||| ||||| |    
T  43460725 aaaagatcaaagggtttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagacataatttgagttaaacttaactg 43460824  T
Q  421 tcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacc 520  Q
    | | ||||||||||| | | |||||||||  |||||||| ||||  || |||||||||| |||| |||||||||||||| || |||| |||||||||| |    
T  43460825 tgaggatttatttggcaaatggaggaaaaagtgagggactaaaatgtacgttttattaattgtgggaccaaaatgaaaacttcaaataatttgagggatc 43460924  T
Q  521 attggatcaaataa 534  Q
    |||| |||||||||    
T  43460925 attgaatcaaataa 43460938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 314 - 542
Target Start/End: Original strand, 47456278 - 47456498
Alignment:
Q  314 tttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaa 412  Q
    ||||||| |||| |||||||  |||| || || | ||||||||||||||| ||||||| ||| |||| |||| |||||||||||         | | |||    
T  47456278 tttaaaaaaaaaaatcaaacaattaagattaatacaattaataaggtctatgatggaccacttttaaagttgttccaccataga---------gttaaaa 47456368  T
Q  413 gttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattattt 512  Q
    |||||| |||  ||||||||||| | || || ||||| ||||||||||||||  || |||||||||| |||| |||||||||||||| ||||||||||||    
T  47456369 gttaacagtcgagatttatttggcaaacagaagaaaaaatgagggaccaaaaagtacgttttattaattgtgggaccaaaatgaaaacttgaaattattt 47456468  T
Q  513 gagggaccattggatcaaataagccttaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  47456469 gagggaccattggatcaaataagccttaaa 47456498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 326 - 537
Target Start/End: Original strand, 32256304 - 32256513
Alignment:
Q  326 gatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcat 424  Q
    |||| |||||||||||| |||||||| | |||||| ||| |||||| ||| |||| |||||||||||||||||||  ||   |||||||||||| ||       
T  32256304 gatcgaacggttaaaattaacaaaat-attaaggtttacaatggaccacttttaatgttggtccaccatagacat--ttgaagttaaagttaacggttgg 32256400  T
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
     |||||||||| | | |||||||||  |||||||||||||  ||  ||||||||| | || |||||||||||||| ||||||||||||||||||||||||    
T  32256401 aatttatttggcaaatggaggaaaaagtgagggaccaaaaggtacattttattaattatgggaccaaaatgaaaacttgaaattatttgagggaccattg 32256500  T
Q  525 gatcaaataagcc 537  Q
    |||||||||||||    
T  32256501 gatcaaataagcc 32256513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 322 - 538
Target Start/End: Original strand, 6173356 - 6173569
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    |||| ||||||| ||||| || |||||||||| ||||||||||||||||| ||| |||| |||||||||| ||||| ||  || | |||||||||||  |    
T  6173356 aaaaaatcaaacagttaagattaacaaaatta-taaggtctacgatggaccacttttaaagttggtccactatagatat--ttagagttaaagttaatag 6173452  T
Q  421 tcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
      ||| |||||||||| | |||||||||||  |||||||||||||  || |||||||||| | || |  ||||||||||| |||||||||||||||||||    
T  6173453 --atggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaattatgggtacaaaatgaaaacttgaaattatttgagggac 6173550  T
Q  520 cattggatcaaataagcct 538  Q
    |||||||||||||||||||    
T  6173551 cattggatcaaataagcct 6173569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 322 - 537
Target Start/End: Original strand, 40509637 - 40509852
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaac-c 419  Q
    |||||||||||| || |||||  | ||||||||| | ||||| | ||||| ||||||||||||||||||| ||||||||  || |||||||| ||||| |    
T  40509637 aaaagatcaaacagtcaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccactatagacat--ttggggttaaacttaacac 40509734  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
       ||||||||||||||| |||||||||||  ||||| ||  |||| || |||||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  40509735 cgaatgatttatttggtaaacggaggaaaaagtgaggaacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggac 40509834  T
Q  520 cattggatcaaataagcc 537  Q
    ||||| | ||||||||||    
T  40509835 cattgaaacaaataagcc 40509852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 376 - 543
Target Start/End: Complemental strand, 41078915 - 41078748
Alignment:
Q  376 ttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgtttta 475  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||  |||||||| || | | |||||||||| | | ||| ||||| |||  |||||    
T  41078915 ttaagattggtccaccatatacatcatttgggttaaagttaaccgtcgggatttattcggcaaatggaggaaaatctaaaggatcaaaagatacttttta 41078816  T
Q  476 ttaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagccttaaaa 543  Q
    | || |||| |||||||||||||| | ||||||| |||||||||||  ||||| ||||||||| ||||    
T  41078815 tcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccagcggatctaataagcctaaaaa 41078748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 334 - 527
Target Start/End: Original strand, 41079751 - 41079942
Alignment:
Q  334 ggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatt 432  Q
    ||||||||| ||||||||||||||||||||||||||| |||| |||| |||| ||||||||||| ||  || | |||||||||||| ||   ||||||||    
T  41079751 ggttaaaatcaacaaaattaataaggtctacgatggaccacttttaatgttgttccaccatagatat--ttggagttaaagttaacggtagggatttatt 41079848  T
Q  433 tggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggat 527  Q
    | | | ||||||||||| || |||||||||||| || |||||||| | |||| ||||||||| |||| | ||||||| ||||||||||| |||||    
T  41079849 tagcaaacggaggaaaagataagggaccaaaacgtacgttttatt-attgtgggaccaaaataaaaaatggaaattaattgagggaccaatggat 41079942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 296 - 536
Target Start/End: Complemental strand, 40508618 - 40508377
Alignment:
Q  296 ataattcaatgatcat-cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggaca-ctcttaaggttggtccaccat 393  Q
    ||||| |||||||||| ||||||||| || | ||||||||||||||||  | ||||||||| |  |||| | |||||| |||||||| ||| ||||||||    
T  40508618 ataatccaatgatcattcttttaaaaaaacatatcaaacggttaaaatttaaaaaattaatgaaatctatggtggacaactcttaagattgatccaccat 40508519  T
Q  394 agacatcatttgggttaaagttaac-cgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaa 492  Q
    ||||||  || || ||||| ||||| |   | |||||||||||   |||||||||||  ||||||||  |||| || |||||||||| |||| ||| |||    
T  40508518 agacat--ttgggattaaacttaacaccgaaggatttatttggctaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggacaaaa 40508421  T
Q  493 atgaaaatttgaaattatttgagggaccattggatcaaataagc 536  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||    
T  40508420 atgaaaacttgaaattatttaggggaccattggatcaaataagc 40508377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 537
Target Start/End: Complemental strand, 47059357 - 47059106
Alignment:
Q  290 acatgcataattcaatgatcatcttttaaaacaaa-agatcaaacggttaaaatgaacaaaa--ttaataaggtctacgatggac-actcttaaggttgg 385  Q
    |||||| |||| ||||| ||||| ||| ||| ||| ||||||||||||| |||| || ||||  ||||||||||||| | ||| | |||||||||||||     
T  47059357 acatgcgtaatccaatggtcatccttttaaataaacagatcaaacggtttaaattaaaaaaaaattaataaggtctatggtgggctactcttaaggttgc 47059258  T
Q  386 tccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtga 485  Q
    |||||||||||| |     |||||||| ||||| |||| ||||||||||| | |||||||||||  ||||||| |||||| ||  ||||||||| |||      
T  47059257 tccaccatagacttttggagggttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgagggatcaaaacgtacattttattaattgtag 47059158  T
Q  486 gaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    |||||||||||||| || |||||| ||  |||||||||| ||| ||||||||    
T  47059157 gaccaaaatgaaaacttaaaattaattaggggaccattgaatctaataagcc 47059106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 405 - 536
Target Start/End: Original strand, 45455358 - 45455489
Alignment:
Q  405 gggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttga 504  Q
    |||||||| ||||| | |||||||||||||| | |||||| ||||  ||||||| |||||  || |||||||||| |||| |||||||||||||||||||    
T  45455358 gggttaaacttaacagccatgatttatttggcaaacggagaaaaaagtgagggatcaaaatgtacgttttattaattgtgggaccaaaatgaaaatttga 45455457  T
Q  505 aattatttgagggaccattggatcaaataagc 536  Q
    ||||| || ||||||||| |||||||||||||    
T  45455458 aattaattaagggaccatcggatcaaataagc 45455489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 322 - 537
Target Start/End: Original strand, 22115067 - 22115283
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaac-c 419  Q
    |||||||||||| || |||||  | ||||||||| | ||||| | |||| |||||||||||||||||||| ||||||||  || |||||||| ||||| |    
T  22115067 aaaagatcaaacagtcaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccactatagacat--ttggggttaaacttaacac 22115164  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttga-ggga 518  Q
       | ||||||||||||  |||||||||||  ||||| ||  |||| || |||||||||| |||| |||||||||||||| |||||||||||| | ||||    
T  22115165 cgaangatttatttggtnaacggaggaaaaagtgaggaacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattttagggga 22115264  T
Q  519 ccattggatcaaataagcc 537  Q
    |||||| | ||||||||||    
T  22115265 ccattgaaacaaataagcc 22115283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 33096979 - 33096866
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||||||||  |||||||||||||  || |||||||||| |||| | | ||||||| || ||||||||||||||||||||||||    
T  33096979 gatttatttggcaaacggaggaaaaagtgagggaccaaaaggtaagttttattaattgtgggcctaaaatgagaacttgaaattatttgagggaccattg 33096880  T
Q  525 gatcaaataagcct 538  Q
    ||||||||||||||    
T  33096879 gatcaaataagcct 33096866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 313 - 535
Target Start/End: Original strand, 24282871 - 24283091
Alignment:
Q  313 ttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaa 411  Q
    |||||||||||| ||||||| ||||||||| ||||||||| |||| || ||||| ||||  ||| ||| |||| ||||||||||||||  || |||||||    
T  24282871 ttttaaaacaaa-gatcaaagggttaaaattaacaaaattgataaagtttacgacggaccatctataatgttgatccaccatagacat--ttggggttaa 24282967  T
Q  412 agttaaccgtcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattat 510  Q
    |||||||   |||| |||||||||| | |||||||||||| |||||||| ||| |   |||||| |||| ||||  |||||||||||||| |||||||||    
T  24282968 agttaacacccatggatttatttggcaaacggaggaaaatgtgagggactaaagcgcctgtttt-ttaattgtggaaccaaaatgaaaatctgaaattat 24283066  T
Q  511 ttgagggaccattggatcaaataag 535  Q
    |||  | ||||  ||||||||||||    
T  24283067 ttggagaaccaacggatcaaataag 24283091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 325 - 509
Target Start/End: Complemental strand, 11501389 - 11501206
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| ||||||||||||||||||||| ||| || ||| ||||||||||||||||||||||||  ||   |||||||||||| |||     
T  11501389 agatcgaatggttaaaattaacaaaattaataaggtctacaatgaaccacttttaaggttggtccaccatagacat--ttgaagttaaagttaacagtcg 11501292  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaa-catatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
     ||||||||||| | | |||||||||  |||||||| ||||   ||| ||||||||| |||| ||||||||||||||  ||||||||    
T  11501291 ggatttatttggcaaatggaggaaaaggtgagggactaaaatgctat-ttttattaactgtgggaccaaaatgaaaacatgaaatta 11501206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 322 - 537
Target Start/End: Original strand, 4299951 - 4300166
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaac-c 419  Q
    ||||||||||||||| |||||  | ||||||||| | ||||| | ||| | ||||||||||||| ||||| |||||| |  || |||||||| ||||| |    
T  4299951 aaaagatcaaacggtcaaaatttaaaaaattaatgaagtctatggtgggccactcttaaggttgatccactatagacgt--ttggggttaaacttaacac 4300048  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
       | ||||||||||| | || ||||||||  ||||||||  |||| || |||||||||| |||| |||||||||||||| |||||||||||   |||||    
T  4300049 cgaaagatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattcaggggac 4300148  T
Q  520 cattggatcaaataagcc 537  Q
     |||||||||||||||||    
T  4300149 gattggatcaaataagcc 4300166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 30310231 - 30310118
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | ||||||||||| |||||| ||  |||  || |||||||||| |||| ||| |||||||||| |||||||||||| |||||| ||||    
T  30310231 gatttatttggcaaacggaggaaaaaatgaggaactcaaatgtacgttttattaattgtgggacaaaaatgaaaacttgaaattatttaagggactattg 30310132  T
Q  525 gatcaaataagcct 538  Q
    ||||||||||||||    
T  30310131 gatcaaataagcct 30310118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 32603043 - 32602930
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||| ||||  |||||||| ||||| || |||||||||| | || ||||||||| |||| |||||||||||||| |||||| ||    
T  32603043 gatttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaattatgggaccaaaataaaaacttgaaattatttgaaggaccaatg 32602944  T
Q  525 gatcaaataagcct 538  Q
    ||||||||||||||    
T  32602943 gatcaaataagcct 32602930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 45454148 - 45454035
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||||||||  |||||||| ||||| ||||||||||||| | |||||||||||||||||  |||||||| ||  |||||||||     
T  45454148 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtatgttttattaattatgagaccaaaatgaaaacgtgaaattaattaggggaccattt 45454049  T
Q  525 gatcaaataagcct 538  Q
     |||||||||||||    
T  45454048 aatcaaataagcct 45454035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 339 - 509
Target Start/End: Original strand, 22538769 - 22538938
Alignment:
Q  339 aaatgaacaaaattaataaggtctacgatggaca-ctcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggta 437  Q
    |||| |||||||||||| ||||||||||| |||  || |||| |||||| ||||||||| ||  || | ||||||||||||||||  ||||||||||| |    
T  22538769 aaataaacaaaattaatgaggtctacgatagaccgcttttaatgttggtacaccatagatat--ttggagttaaagttaaccgtcgagatttatttggca 22538866  T
Q  438 tacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
     ||||||||||| ||||||||| ||||| |   ||||||||| |||| |||||||| |||||  ||||||||    
T  22538867 aacggaggaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaaagaaaacatgaaatta 22538938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 446 - 537
Target Start/End: Original strand, 30311496 - 30311587
Alignment:
Q  446 aaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    |||| |||||||||  |||| ||||||||||||| |||| |||||||||||||||||||||||||||  ||||| | |||||||||||||||    
T  30311496 aaaaaatgagggacttaaacgtatgttttattaattgtgggaccaaaatgaaaatttgaaattatttaggggactaatggatcaaataagcc 30311587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 331 - 499
Target Start/End: Original strand, 13564150 - 13564319
Alignment:
Q  331 aacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcattt-gggttaaagttaaccgtcatgatt 428  Q
    ||||||| |||| || | |||||||| | |||| | ||||| |||||||||| || |||||||||||||| |||| |||||||| |||| ||||  ||||    
T  13564150 aacggttcaaattaaaataattaataggatctatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaa-cgtcgggatt 13564248  T
Q  429 tatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaa 499  Q
    ||||||| | |||||||||||| |||||||| |||||    |||||||||| |||| ||||||||||||||    
T  13564249 tatttggcaaacggaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaatgaaaa 13564319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 22691190 - 22691116
Alignment:
Q  314 tttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtc 387  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||| ||||||    
T  22691190 tttaaaacaaaagatcaaacggttaaaataaacaaaatttataaggtatacgatggaccactcttaagattggtc 22691116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 424 - 521
Target Start/End: Complemental strand, 30333396 - 30333299
Alignment:
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    |||||||||||  | |||||| |||| |||||||||||||| ||| |||||||||| |||| |||||||||||||| ||||||||||||  |||||||    
T  30333396 tgatttatttgacaaacggagaaaaaaatgagggaccaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggacca 30333299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 459
Target Start/End: Original strand, 22337288 - 22337411
Alignment:
Q  335 gttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttattt 433  Q
    |||||||| |||||||||||||||||||||| || || ||  ||||||||||||||||||||||||  ||   |||||| ||||| |||| |||||||||    
T  22337288 gttaaaattaacaaaattaataaggtctacggtgtactacatttaaggttggtccaccatagacat--ttgaagttaaatttaacggtcaggatttattt 22337385  T
Q  434 ggtatacggaggaaaatatgagggac 459  Q
    || | |||||||||||| | ||||||    
T  22337386 ggcaaacggaggaaaatgtaagggac 22337411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 347 - 509
Target Start/End: Original strand, 40812542 - 40812703
Alignment:
Q  347 aaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgg-gttaaagttaaccgtcatgatttatttggtatacggag 444  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||| |   | |||||| |||||||| ||| |||  ||| ||||||  | || |||    
T  40812542 aaaattaataagatctacgatggatcacttttaaggttggtccaccatgg---ttatttggagttaaagtaaacagtcgggatatatttgacaaacagag 40812638  T
Q  445 gaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    |||||||||||||| |||||| || |||||||||| | ||  |||||||||||||  ||||||||    
T  40812639 gaaaatatgagggagcaaaacgtacgttttattaattatggaaccaaaatgaaaacatgaaatta 40812703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 509
Target Start/End: Original strand, 47060354 - 47060565
Alignment:
Q  297 taattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatag 395  Q
    |||||||||| ||||| ||| ||| || | |||||||| ||||| |  | ||| ||||||||||||| | ||||| | |||||||||||||||||||||     
T  47060354 taattcaatggtcatccttttaaaaaacaaatcaaacgattaaattttaaaaatttaataaggtctatggtggactattcttaaggttggtccaccatat 47060453  T
Q  396 acatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatg 495  Q
    ||||  || | |||||| ||||| |||  ||||||||||| | |||||  |||   |||||||||||||| || |||||||||| | |  ||||||||||    
T  47060454 acat--ttggtgttaaacttaacagtccggatttatttggcaaacggaaaaaagggtgagggaccaaaacgtacgttttattaattataggaccaaaatg 47060551  T
Q  496 aaaatttgaaatta 509  Q
    |||| || ||||||    
T  47060552 aaaacttaaaatta 47060565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 538
Target Start/End: Complemental strand, 4298948 - 4298710
Alignment:
Q  302 caatgatcat-cttttaaaacaaa-agatcaaacggttaaaatgaacaaaattaataaggtctacgatggaca-ctcttaaggttggtccaccatagaca 398  Q
    |||||||||| ||||||||| ||| | ||||||||||||||||  | ||||||||| | ||||| | |||||| |||||| | ||| ||||||||| ||     
T  4298948 caatgatcattcttttaaaaaaaacatatcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaggattgatccaccatacacg 4298849  T
Q  399 tcatttgggttaaagttaaccgtca--tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatga 496  Q
    |  || |||||||| |||||  |||  |||||||||||| | || ||||||||  ||||||||  ||||  |  ||||||||| |||| || |||||| |    
T  4298848 t--ttagggttaaacttaaca-tcaaatgatttatttggcaaacagaggaaaaagtgagggacttaaacccacattttattaattgtgggatcaaaataa 4298752  T
Q  497 aaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    ||| || |||||||||  ||||||||||||||||||||||||    
T  4298751 aaacttaaaattatttaggggaccattggatcaaataagcct 4298710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 541
Target Start/End: Original strand, 11502373 - 11502544
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttg-ggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||||| ||   ||||||||||| | || ||| ||||  |||||||| ||  |  |     
T  11502373 cactcttaaggttggtctaccatagacatcatttgaggttaaacttaactgttgggatttatttggcaaacagagcaaaagttgagggactaattcgcaa 11502472  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagccttaa 541  Q
     |||||||||||||| || |||||||||||  |||||||| || | ||||||   |||| ||||||||||||    
T  11502473 tttttattaaatgtgggatcaaaatgaaaacatgaaattagttaaaggaccaaacgatctaataagccttaa 11502544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 538
Target Start/End: Original strand, 33779040 - 33779203
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcat-gatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    |||||||||||||||||||||||||||||  ||  ||||||| ||||| | ||  |||||||| ||    ||||||||||   ||||||| ||||| |      
T  33779040 cactcttaaggttggtccaccatagacat--ttgtggttaaacttaacagccaaagatttattgggg---cggaggaaaaagcgagggactaaaacgtga 33779134  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    |||||||||| |||| | |||||||||||| ||||||||||||  ||||| | ||||||||||||||||    
T  33779135 gttttattaattgtggggccaaaatgaaaacttgaaattatttaggggactaatggatcaaataagcct 33779203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 288 - 400
Target Start/End: Complemental strand, 3413779 - 3413666
Alignment:
Q  288 agacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggaca-ctcttaaggttggt 386  Q
    ||||| ||||||||||||||| ||||||| |   || ||||||||||||||||||  | ||||||||| | ||||| | |||||| |||||||| ||| |    
T  3413779 agacacgcataattcaatgatgatctttttagcaaacagatcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgat 3413680  T
Q  387 ccaccatagacatc 400  Q
    ||||||||||||||    
T  3413679 ccaccatagacatc 3413666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 386 - 541
Target Start/End: Complemental strand, 46835824 - 46835669
Alignment:
Q  386 tccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtg 484  Q
    ||||||||| |||||||||||| ||||| |||||  ||  ||||||||||  | || ||||||||  |||| |||  ||| |||  ||||||||| |||     
T  46835824 tccaccataaacatcatttggggttaaacttaact-tcgagatttatttgacaaacagaggaaaaattgagagacttaaaaatacattttattaattgta 46835726  T
Q  485 agaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagccttaa 541  Q
     ||| |||| |||||||||||||||||| |||||||||||||||| |||| ||||||    
T  46835725 ggactaaaaagaaaatttgaaattatttaagggaccattggatcatataaaccttaa 46835669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 647 - 725
Target Start/End: Original strand, 38857159 - 38857236
Alignment:
Q  647 tcggcagttaactgccgaaattcaatttaatccatcggcactttaagtgtcgaggaaattataccttcatattcttcga 725  Q
    ||||||||||||||||||| | ||||||||||  ||||||| ||||||| ||||||||| ||| |||||| ||||||||    
T  38857159 tcggcagttaactgccgaagtccaatttaatctttcggcac-ttaagtgccgaggaaatcataacttcattttcttcga 38857236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 650 - 723
Target Start/End: Complemental strand, 38857963 - 38857891
Alignment:
Q  650 gcagttaactgccgaaattcaatttaatccatcggcactttaagtgtcgaggaaattataccttcatattcttc 723  Q
    ||||||||||| |||| | ||||||||||||||||||| ||||||| ||||||||| ||| |||||| ||||||    
T  38857963 gcagttaactgtcgaagtccaatttaatccatcggcac-ttaagtgccgaggaaatcataacttcattttcttc 38857891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 325 - 426
Target Start/End: Complemental strand, 35295909 - 35295809
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||||||||||| ||| ||  || |||||||||||||| ||||    
T  35295909 agatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccacagatat--ttggggttaaagttaacggtca 35295812  T
Q  424 tga 426  Q
    |||    
T  35295811 tga 35295809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 399
Target Start/End: Original strand, 669292 - 669369
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacat 399  Q
    |||||||||||||||| |||| ||||||||||||| | |||| | |||| ||||||||| | |||||||||||||||||    
T  669292 aaaagatcaaacggtttaaattaacaaaattaataggatctatggtggaccactcttaa-gatggtccaccatagacat 669369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 13921367 - 13921322
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  13921367 cacacgagtaaattactcaaatgc-tcctcggcagttaactgccgaa 13921322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 499
Target Start/End: Complemental strand, 22336184 - 22336015
Alignment:
Q  331 aacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttggg-ttaaagttaaccgtcatgatt 428  Q
    ||||||| |||| || | |||||||| | |||| | ||||| ||| ||||||||| |||||||||| ||||||||||| ||||| |||||  ||  ||||    
T  22336184 aacggttgaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccatag-catcatttggggttaaacttaacattcgggatt 22336086  T
Q  429 tatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaa 499  Q
    ||||||| | || ||||||||  |||||||| |||||     ||||||||| |||| ||||||||||||||    
T  22336085 tatttggcaaactgaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 22336015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 537
Target Start/End: Original strand, 30334669 - 30334755
Alignment:
Q  451 atgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    ||||||||||||||  || |||||||||| |||| ||| |||||||||| ||||||||| ||  ||||||| |||||| | ||||||    
T  30334669 atgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaaattagttaggggaccaatggatctattaagcc 30334755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 613 - 663
Target Start/End: Original strand, 40810496 - 40810546
Alignment:
Q  613 ctaagacacaccagtaaattactcaaatgcctcctcggcagttaactgccg 663  Q
    |||||||||||||||| |||||| ||||||| |||| ||||||||||||||    
T  40810496 ctaagacacaccagtatattacttaaatgccccctcagcagttaactgccg 40810546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 521
Target Start/End: Original strand, 35130 - 35195
Alignment:
Q  456 ggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    ||||||||||||   |||||||| || || |||||||||||||||| |||||||||| ||||||||    
T  35130 ggaccaaaacatgacttttattagatatgggaccaaaatgaaaattggaaattatttaagggacca 35195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 423
Target Start/End: Complemental strand, 43441509 - 43441459
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    |||||||||||||||| ||||||||||||  || |||||||||||||||||||    
T  43441509 cactcttaaggttggtacaccatagacat--ttagggttaaagttaaccgtca 43441459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 625 - 665
Target Start/End: Complemental strand, 12210687 - 12210648
Alignment:
Q  625 agtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  12210687 agtaaattactcaaatgcc-cctcggcagttaactgccgaa 12210648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 668
Target Start/End: Original strand, 14101419 - 14101466
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  14101419 acacgagtaaattactcaaatgcc-ccttggcagttaactgccgaaatt 14101466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 668
Target Start/End: Original strand, 14411436 - 14411483
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  14411436 acacgagtaaattactcaaatgcc-ccttggcagttaactgccgaaatt 14411483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 664
Target Start/End: Complemental strand, 34139771 - 34139728
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccga 664  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  34139771 acacgagtaaattactcaaatgcc-cctcggcagttaactgccga 34139728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 534118 - 534165
Alignment:
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
    |||||||||||||||||||||||||||||  |||||||| || |||||    
T  534118 ttttattaaatgtgagaccaaaatgaaaagatgaaattaattaaggga 534165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 518
Target Start/End: Complemental strand, 537378 - 537331
Alignment:
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
    |||||||||||||||||||||||||||||  |||||||| || |||||    
T  537378 ttttattaaatgtgagaccaaaatgaaaagatgaaattaattaaggga 537331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 418
Target Start/End: Complemental strand, 2414971 - 2414863
Alignment:
Q  309 catcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttggg 407  Q
    |||||||||| | ||||  |||||||||| |||| || |||||||||| | |||| | ||||| ||| ||||||||||||||  ||||||||  || |||    
T  2414971 catcttttaataaaaaaattcaaacggtttaaattaagaaaattaataggatctatggtggaccacttttaaggttggtccattatagacat--ttgggg 2414874  T
Q  408 ttaaagttaac 418  Q
    |||||||||||    
T  2414873 ttaaagttaac 2414863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 668
Target Start/End: Complemental strand, 14102445 - 14102403
Alignment:
Q  625 agtaaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  14102445 agtaaattactcaaatgcc-cctcgacagttaactgccgaaatt 14102403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 668
Target Start/End: Complemental strand, 14412462 - 14412420
Alignment:
Q  625 agtaaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  14412462 agtaaattactcaaatgcc-cctcgacagttaactgccgaaatt 14412420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 668
Target Start/End: Complemental strand, 30846904 - 30846850
Alignment:
Q  613 ctaagacacaccagtaaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    |||||| |||| |||||||||||||||| || ||||| ||||||||||||||||||    
T  30846904 ctaagaaacacgagtaaattactcaaatacc-cctcgacagttaactgccgaaatt 30846850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 689
Target Start/End: Complemental strand, 48590357 - 48590314
Alignment:
Q  646 ctcggcagttaactgccgaaattcaatttaatccatcggcactt 689  Q
    ||||||||||||||||||||||||||||| | |||||| |||||    
T  48590357 ctcggcagttaactgccgaaattcaatttcacccatcgacactt 48590314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 7039 - 7084
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  7039 cacacgagtaaattactcaaatgcc-cctcggcagttaactaccgaa 7084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 399
Target Start/End: Original strand, 9662141 - 9662218
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacat 399  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| |||||||||||||||||||    
T  9662141 aaaagatcaaatggttaaaattga-aaaattaataaggtctatggtggactatctataatgttggtccaccatagacat 9662218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 10524460 - 10524415
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  10524460 cacacgagtaaattactcaaatgcc-cctcggcagttaactgtcgaa 10524415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 42582085 - 42582130
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||    
T  42582085 cacacgagtaaattactcaaatgtc-cctcggcagttaactgccgaa 42582130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 42794166 - 42794211
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  42794166 cacacgagtaaattactcaaatg-ctcctcggcagataactgccgaa 42794211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 661
Target Start/End: Complemental strand, 45258107 - 45258066
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgc 661  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  45258107 cacacgagtaaattactcaaatgcc-cctcggcagttaactgc 45258066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 46907509 - 46907554
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||||    
T  46907509 cacacgagtaaattactcaaatgcc-cttcggcagttaactgccgaa 46907554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 661
Target Start/End: Complemental strand, 49141721 - 49141680
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgc 661  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  49141721 cacacgagtaaattactcaaatgcc-cctcggcagttaactgc 49141680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 521
Target Start/End: Complemental strand, 27833 - 27768
Alignment:
Q  456 ggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    ||||||||||||   |||||||| || ||  ||||||||||||||| |||||||||| ||||||||    
T  27833 ggaccaaaacatgacttttattagatatggaaccaaaatgaaaattggaaattatttaagggacca 27768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 511
Target Start/End: Complemental strand, 11344572 - 11344531
Alignment:
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatt 511  Q
    |||||||||| |||| |||||||||||||| |||||||||||    
T  11344572 gttttattaattgtgggaccaaaatgaaaacttgaaattatt 11344531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 371 - 423
Target Start/End: Complemental strand, 15992298 - 15992248
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    |||||||||||||||||||||||||||||  ||  ||||||||||||| ||||    
T  15992298 cactcttaaggttggtccaccatagacat--ttgaggttaaagttaacagtca 15992248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 689
Target Start/End: Original strand, 40810561 - 40810602
Alignment:
Q  648 cggcagttaactgccgaaattcaatttaatccatcggcactt 689  Q
    |||||| ||||| ||||||| |||||||||||||||||||||    
T  40810561 cggcaggtaacttccgaaatccaatttaatccatcggcactt 40810602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 44554687 - 44554748
Alignment:
Q  338 aaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacat 399  Q
    ||||| ||||||||||||||| |||||| |||||  |  ||| |||||||||||||||||||    
T  44554687 aaaattaacaaaattaataagatctacggtggaccattataatgttggtccaccatagacat 44554748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 674
Target Start/End: Original strand, 48589858 - 48589887
Alignment:
Q  645 cctcggcagttaactgccgaaattcaattt 674  Q
    ||||||||||||||||||||||||||||||    
T  48589858 cctcggcagttaactgccgaaattcaattt 48589887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 665
Target Start/End: Original strand, 49140627 - 49140671
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    |||| |||||||||||||||| || |||||||||||||||||||||    
T  49140627 acacgagtaaattactcaaatacc-cctcggcagttaactgccgaa 49140671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 1e-86; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 285 - 537
Target Start/End: Original strand, 50444565 - 50444816
Alignment:
Q  285 attagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttg 384  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50444565 attagacatgcataatccaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttg 50444664  T
Q  385 gtccaccatagacatcatttgg-gttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgt 483  Q
    ||||| ||||||| |  ||||| |||||||||||| ||   ||||||||||| |  |||||||||| ||||||||||||||  || |||||||||| |||    
T  50444665 gtccaacatagacgt--tttggagttaaagttaacggtttggatttatttggcaatcggaggaaaaaatgagggaccaaaatgtacgttttattaattgt 50444762  T
Q  484 gagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    | ||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50444763 gggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagcc 50444816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 50444283 - 50444422
Alignment:
Q  18 ggagaagttgttaaggaggaagagaagaggtgcattattaagagaggatttaaaaatgaagattgagttgtaaagtgggtgaacggatctgtgtgtaaaa 117  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  50444283 ggagaagttgttaaggaggaagagaagaggtggattattaagagaggatttaaaaatgaagattgagttgtaaagtgggtaaacagatctgtgtgtaaaa 50444382  T
Q  118 ttgtgagaatagatagattaatgggtttggttgggtggag 157  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50444383 ttgtgagaatagatagattaatgggtttggttgggtggag 50444422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 371 - 539
Target Start/End: Original strand, 45584960 - 45585129
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggtt-aaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||| ||||| |||| ||||||||||| | |||||||||||  ||| |||||||||  ||     
T  45584960 cactcttaaagttgggccaccatagacatcatttgggtttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgaaggaccaaaaggtac 45585059  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctt 539  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  45585060 gttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggactattggatcaaataagcctt 45585129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 330 - 537
Target Start/End: Complemental strand, 27814497 - 27814290
Alignment:
Q  330 aaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggtt-aaagttaaccgtcatgat 427  Q
    ||||||||||||| ||||||||||||||||| ||||||||| |||| |||| |||||||||||||||||||  || | ||| |||||||||||||  |||    
T  27814497 aaacggttaaaattaacaaaattaataaggtttacgatggaccacttttaaagttggtccaccatagacat--ttagagttaaaagttaaccgtcgggat 27814400  T
Q  428 ttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggat 527  Q
    |||||||| | || |||||||| ||||||||||||||  || |||||||||| | |  ||| |||||||||| ||||||||||||||||||  ||||||     
T  27814399 ttatttggcaaacagaggaaaaaatgagggaccaaaaggtacgttttattaattataggactaaaatgaaaacttgaaattatttgagggatgattggaa 27814300  T
Q  528 caaataagcc 537  Q
    ||||||||||    
T  27814299 caaataagcc 27814290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 322 - 538
Target Start/End: Original strand, 15072693 - 15072909
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    ||||||||||||  || |||| || ||||||||||  ||||||| ||||| |||||| |||||||||||||||||||||  ||  ||||||||||||| |    
T  15072693 aaaagatcaaacaatttaaattaagaaaattaatagagtctacggtggaccactctttaggttggtccaccatagacat--ttgaggttaaagttaacag 15072790  T
Q  421 tcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
     |||| |||||||||| | ||||||||||| || |||||||||||  || |||||||||| |||| |||||||||||||| ||||||||| ||   ||||    
T  15072791 acatggatttatttggcaaacggaggaaaaaataagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggac 15072890  T
Q  520 cattggatcaaataagcct 538  Q
    ||||| |||||||||||||    
T  15072891 cattgaatcaaataagcct 15072909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 287 - 538
Target Start/End: Complemental strand, 15233000 - 15232749
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    |||||||||||||| ||||| |  |||||||||| |||| ||||||||||| | || || | |||||||| | |||| ||||||| ||| |||| |||||    
T  15233000 tagacatgcataatccaatggttctcttttaaaa-aaaatatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttgg 15232902  T
Q  386 tccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtga 485  Q
    ||||| ||| ||||||||||||||||| ||||| |||||||||||||||| | || ||||||||| |||||||| |||||     ||||||||| | ||     
T  15232901 tccactatatacatcatttgggttaaacttaacggtcatgatttatttggcaaacagaggaaaatgtgagggactaaaacgccatttttattaattatgg 15232802  T
Q  486 gaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    ||||||||||||||  ||||||||  | ||||||||   |||| |||||||||    
T  15232801 gaccaaaatgaaaacatgaaattaaataagggaccaaatgatctaataagcct 15232749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 287 - 535
Target Start/End: Original strand, 35943315 - 35943563
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggtt--aaaatgaacaaaattaataaggtctacgatgga-cactcttaaggtt 383  Q
    ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||||||  ||||| || ||| ||||||||||||| | |||| |||||||||||||    
T  35943315 tagacctgcgtaattcaatggtcatcctttcaaa-aaaagatcaaacggttttaaaataaa-aaatttaataaggtctatggtggatcactcttaaggtt 35943412  T
Q  384 ggtccaccatagacatcatttgggttaaagttaaccgtcatg--atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaat 481  Q
    ||||||||||||||||  || |||||||| ||||| | || |  |||||||||| | ||| |||||||  ||||| |||||||  || |||||||||| |    
T  35943413 ggtccaccatagacat--ttagggttaaacttaacagccaggggatttatttggcaaacgaaggaaaaagtgagg-accaaaatgtacgttttattaatt 35943509  T
Q  482 gtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataag 535  Q
    ||| ||||||||| ||||||||||||||||| || |||||||  ||||||||||    
T  35943510 gtgggaccaaaataaaaatttgaaattatttaagagaccattaaatcaaataag 35943563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 322 - 479
Target Start/End: Complemental strand, 46110494 - 46110338
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  || | |||||||||||| |    
T  46110494 aaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactcttaaggttggtccaccatagatat--ttagagttaaagttaacag 46110397  T
Q  421 tcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaa 479  Q
    ||  ||||||||| | | |||||| ||||  |||| ||||||||  || ||||||||||    
T  46110396 tcgagatttatttagcaaacggagaaaaacttgagtgaccaaaaagtacgttttattaa 46110338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 325 - 509
Target Start/End: Complemental strand, 16964043 - 16963860
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||| |||| ||||  || | |||||||||||| ||||    
T  16964043 agatcgaagggttaaaattaacaaaattaataaggtctatgatggaccacttttaaggttggtccatcataaacat--ttagagttaaagttaacagtca 16963946  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
      |||||||||| | ||||||||||| ||||||||| ||||||    ||||||||| |||| ||||||||||||||  ||||||||    
T  16963945 gcatttatttggcaaacggaggaaaagatgagggactaaaacaccatttttattaattgtgggaccaaaatgaaaacatgaaatta 16963860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 322 - 542
Target Start/End: Complemental strand, 14471069 - 14470849
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaac-c 419  Q
    ||||||||||||||| |||||  | ||||||||| | || || | ||||| ||||||||||||||||||| |||||| |  || |||||||| ||||| |    
T  14471069 aaaagatcaaacggtcaaaatttaaaaaattaatgaagtttatggtggaccactcttaaggttggtccactatagacgt--ttggggttaaacttaacac 14470972  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
       | ||||||||||| | ||| |||||||  ||||||||  || | || |||||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  14470971 cgaaggatttatttggcaaacgaaggaaaaagtgagggacttaaccgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggac 14470872  T
Q  520 cattggatcaaataagccttaaa 542  Q
    |||||||||||||||||||||||    
T  14470871 cattggatcaaataagccttaaa 14470849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 323 - 538
Target Start/End: Original strand, 41873875 - 41874090
Alignment:
Q  323 aaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgt 421  Q
    ||||||||||||||||||||  | ||||||||| | ||||| | ||||| ||||||||||||||||||||||||||||  ||  ||||||| |||||       
T  41873875 aaagatcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccaccatagacat--ttgtggttaaacttaacaac 41873972  T
Q  422 catg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacc 520  Q
    || | |||||||||||| |||||||||||  | | || |||||| |||  ||||||||| | ||||||||| ||||||| | ||||||| ||||||||||    
T  41873973 caaggatttatttggtaaacggaggaaaagctaaagggccaaaagatactttttattaattatgagaccaagatgaaaaatggaaattaattgagggacc 41874072  T
Q  521 attggatcaaataagcct 538  Q
    | |||||| |||||||||    
T  41874073 aatggatctaataagcct 41874090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 15071452 - 15071339
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||||| |||||||||||  ||||||||||||||||| |||||||||| | || |||||||||||||| ||||||||||||  ||||||| ||    
T  15071452 gatttatttggtaaacggaggaaaaagtgagggaccaaaacatacgttttattaattatgtgaccaaaatgaaaacttgaaattatttaggggaccaatg 15071353  T
Q  525 gatcaaataagcct 538  Q
    ||| ||||||||||    
T  15071352 gattaaataagcct 15071339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 311 - 538
Target Start/End: Original strand, 46111388 - 46111607
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggtt 409  Q
    |||||||||| |||| ||||||| ||||| || |||| |||||||||| ||||  |||||| ||| |||| |||| |||||||||||         | |     
T  46111388 tcttttaaaaaaaaaaatcaaacagttaagattaacacaattaataagatctatcatggaccacttttaaagttgatccaccataga---------gtta 46111478  T
Q  410 aaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||||||||| |||  ||||||||||| | ||| ||||||| |||||| |||||||  || |||||||||| |||| ||||||||| |||| |||||||||    
T  46111479 aaagttaacagtcgggatttatttggcaaacgaaggaaaaaatgaggaaccaaaaggtacgttttattaattgtgggaccaaaataaaaacttgaaatta 46111578  T
Q  510 tttgagggaccattggatcaaataagcct 538  Q
    ||| ||||||||||| |||||||||||||    
T  46111579 tttaagggaccattgaatcaaataagcct 46111607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 339 - 509
Target Start/End: Original strand, 49802816 - 49802985
Alignment:
Q  339 aaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggta 437  Q
    |||| |||||||||||| ||||||||||| ||| ||| ||||||||||| ||||||||||||  || | ||| ||||||||||||  ||||||||||| |    
T  49802816 aaataaacaaaattaatgaggtctacgatagaccacttttaaggttggtacaccatagacat--ttagagttgaagttaaccgtcgggatttatttggca 49802913  T
Q  438 tacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
     |||||| |||| ||||||||| ||||| |   ||||||||| |||| ||||||||||||||  ||||||||    
T  49802914 aacggagaaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaatta 49802985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 471 - 541
Target Start/End: Complemental strand, 52627579 - 52627509
Alignment:
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagccttaa 541  Q
    ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52627579 ttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataagccttaa 52627509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 425 - 538
Target Start/End: Original strand, 24499661 - 24499774
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||||| |||||||||||  |||||||||||||| |  |||||||||| ||||||||||||||||||| ||||||||||||  |||||||       
T  24499661 gatttatttggtaaacggaggaaaaagtgagggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaacttgaaattatttaggggaccaaca 24499760  T
Q  525 gatcaaataagcct 538  Q
     |||||||||||||    
T  24499761 aatcaaataagcct 24499774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 648 - 725
Target Start/End: Complemental strand, 38633195 - 38633119
Alignment:
Q  648 cggcagttaactgccgaaattcaatttaatccatcggcactttaagtgtcgaggaaattataccttcatattcttcga 725  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||    
T  38633195 cggcagttaactgccgaaattcaatttaatccatcgccac-ttaagtgccgaggaaattataccttcattttcttcga 38633119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 425 - 537
Target Start/End: Original strand, 52628879 - 52628991
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | ||||||||||| ||||||||||||||  || |||||||||| |||| ||||||||| |||| |||||||||||| |||||||  |     
T  52628879 gatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaattaaaacttgaaattatttaagggaccgata 52628978  T
Q  525 gatcaaataagcc 537  Q
    |||||||||||||    
T  52628979 gatcaaataagcc 52628991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 311 - 509
Target Start/End: Original strand, 16965018 - 16965217
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcattt-gggt 408  Q
    |||||||||| |||| | ||||||||| |||| || | |||||||| | |||| | ||||| |||||||| |||||||||||||| ||||||||| ||||    
T  16965018 tcttttaaaagaaaaaa-caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggt 16965116  T
Q  409 taaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatt 508  Q
    |||| |||||| ||   ||||||||| || ||||| |||||| | |||||| ||||| |   ||||||||| |||| |||||||||||||||  ||||||    
T  16965117 taaacttaaccatcggaatttatttgataaacggaagaaaatgtaagggactaaaacgtcatttttattaattgtgggaccaaaatgaaaataagaaatt 16965216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 297 - 537
Target Start/End: Original strand, 14477668 - 14477909
Alignment:
Q  297 taattcaatgatcat-cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggaca-ctcttaaggttggtccaccata 394  Q
    |||| |||||||||| |||||||||  | | ||||||||||||||||  | ||||||||| | ||||| | |||||| |||||||| ||| || ||||||    
T  14477668 taatccaatgatcattcttttaaaaagacatatcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatctaccata 14477767  T
Q  395 gacatcatttgggttaaagttaaccgtc--atgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaa 492  Q
    |||||  || | |||||| |||||  ||  | ||||||||||| | |||||| ||||  ||||||||  |||| || |||||||||| |||| || ||||    
T  14477768 gacat--ttagagttaaacttaaca-tcgaaggatttatttggcaaacggagaaaaaagtgagggacttaaacgtacgttttattaattgtgggatcaaa 14477864  T
Q  493 atgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
     |||||| || |||||||||  |||||||||||||||||||||||    
T  14477865 gtgaaaacttaaaattatttatgggaccattggatcaaataagcc 14477909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 331 - 539
Target Start/End: Complemental strand, 41872780 - 41872572
Alignment:
Q  331 aacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgattt 429  Q
    ||||||| |||| || ||| ||||||||||||| | || || | ||||||| ||||| ||||||||||||  |  |||||||| |||||    |||||||    
T  41872780 aacggtttaaattaaaaaatttaataaggtctatggtgaactaatcttaagattggttcaccatagacatt-tgggggttaaacttaacaccaatgattt 41872682  T
Q  430 atttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatca 529  Q
    |||||| | |||||||||||  |||| |||  |||| || |||||||||| |||  || ||||||||||| ||||||||| |  |||||||||| |||||    
T  41872681 atttggcaaacggaggaaaaagtgagagacttaaacgtacgttttattaattgtatgatcaaaatgaaaagttgaaattaatcaagggaccattagatca 41872582  T
Q  530 aataagcctt 539  Q
    ||||||||||    
T  41872581 aataagcctt 41872572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 443 - 538
Target Start/End: Original strand, 34351980 - 34352075
Alignment:
Q  443 aggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    |||||||  |||||||||||||  ||  ||||||||| |||| |||||||||||||| || ||||||||| |||||| ||||||||||||||||||    
T  34351980 aggaaaaagtgagggaccaaaaggtacattttattaattgtgggaccaaaatgaaaacttaaaattatttaagggactattggatcaaataagcct 34352075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 425 - 539
Target Start/End: Complemental strand, 23091461 - 23091347
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||| ||||  |||| ||||||||| || |||||||||| ||| | |||||||||||||| |||||||| ||  ||||||| |     
T  23091461 gatttatttggcaaacggagaaaaaagtgagtgaccaaaacgtacgttttattaattgtaaaaccaaaatgaaaatgtgaaattagttaggggaccaata 23091362  T
Q  525 gatcaaataagcctt 539  Q
    |||||||||||||||    
T  23091361 gatcaaataagcctt 23091347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 653 - 725
Target Start/End: Original strand, 38632520 - 38632591
Alignment:
Q  653 gttaactgccgaaattcaatttaatccatcggcactttaagtgtcgaggaaattataccttcatattcttcga 725  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||||||    
T  38632520 gttaacttccgaaatccaatttaatccatcggcac-ttaagtgccgaggaaattatacattcattttcttcga 38632591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 325 - 509
Target Start/End: Original strand, 15233949 - 15234131
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| ||||||| ||||| |||||||||||||| ||||| ||| |||||| |  ||||||||  ||   |||||||| ||| |||     
T  15233949 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctgaagattggtctattatagacat--ttgaagttaaagt-aacagtcg 15234045  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
     ||||||||||| | |||||||||||| |||||||| |||||     ||||||||| |||| ||||||||||||||  ||||||||    
T  15234046 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 15234131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 406 - 531
Target Start/End: Complemental strand, 50442754 - 50442628
Alignment:
Q  406 ggttaaagttaaccgtcat-gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttga 504  Q
    ||||||||||||| ||||  ||||||||||  | || ||||||||  ||||| | |||||  || |||||||||| |||||||||||||| ||||  | |    
T  50442754 ggttaaagttaacagtcaaagatttatttgacaaacagaggaaaaggtgaggaatcaaaatgtacgttttattaattgtgagaccaaaataaaaacataa 50442655  T
Q  505 aattatttgagggaccattggatcaaa 531  Q
    ||||||||||||||| |||||||||||    
T  50442654 aattatttgagggacaattggatcaaa 50442628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 287 - 509
Target Start/End: Complemental strand, 46467393 - 46467172
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    |||||| | ||||||||||| ||||||||| | | || | ||||||||||| |||| || ||| |||||||  |||||| |||| |||| |||| |||||    
T  46467393 tagacacgtataattcaatggtcatctttttagaaaatatatcaaacggtttaaattaa-aaatttaataacatctacggtggatcacttttaatgttgg 46467295  T
Q  386 tccaccatagacatcatttgggttaaagttaaccgtca-tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtg 484  Q
    ||||||||||||||  ||  ||||||| ||||| |  |  ||||||||||  | ||||||| |||  ||||||||| ||||||  |||||||||  | ||    
T  46467294 tccaccatagacat--ttatggttaaacttaacagcgagggatttatttgacaaacggaggcaaacctgagggaccgaaacatgagttttattagttatg 46467197  T
Q  485 agaccaaaatgaaaatttgaaatta 509  Q
     |||||||||||||| |||||||||    
T  46467196 ggaccaaaatgaaaacttgaaatta 46467172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 429 - 509
Target Start/End: Original strand, 44278359 - 44278439
Alignment:
Q  429 tatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||||||| | |||||| |||| ||||||||||||||| || ||||||||||  ||| |||||||||||||| |||||||||    
T  44278359 tatttggcaaacggagaaaaaaatgagggaccaaaacgtacgttttattaatcgtgggaccaaaatgaaaacttgaaatta 44278439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 521
Target Start/End: Original strand, 20069924 - 20069989
Alignment:
Q  456 ggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    |||||||||||| |||||||||| || |||||||||||||||||   ||||||| |||||||||||    
T  20069924 ggaccaaaacatgtgttttattagatatgagaccaaaatgaaaacgggaaattaattgagggacca 20069989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 50442825 - 50442752
Alignment:
Q  314 tttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggt 386  Q
    ||||||||||||||||||| ||||||||| |  ||||||||||  ||||||||||||| |||||||| ||||||    
T  50442825 tttaaaacaaaagatcaaatggttaaaattattaaaattaatacagtctacgatggactactcttaaagttggt 50442752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 521
Target Start/End: Original strand, 51042337 - 51042444
Alignment:
Q  414 ttaaccgtcatga-tttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattattt 512  Q
    ||||| ||||||| ||||||||| | |||||| |||| | ||||||| ||||| |  |||||||||| |||| |||||||||||||||| ||||||| ||    
T  51042337 ttaacggtcatgaatttatttggcaaacggagaaaaaaa-gagggactaaaacgtgagttttattaattgtgggaccaaaatgaaaattggaaattaatt 51042435  T
Q  513 gagggacca 521  Q
     ||||||||    
T  51042436 aagggacca 51042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 293 - 399
Target Start/End: Complemental strand, 48527775 - 48527669
Alignment:
Q  293 tgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccacc 391  Q
    |||||||| ||||| ||||| ||||||| |||||||||||| ||| |||| || | |||| ||||| |||| | ||||| |||||||| ||||||| |||    
T  48527775 tgcataatccaatggtcatcatttaaaa-aaaagatcaaacagtttaaattaaaataattgataagatctatggtggaccactcttaaagttggtcgacc 48527677  T
Q  392 atagacat 399  Q
    ||||||||    
T  48527676 atagacat 48527669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 683
Target Start/End: Complemental strand, 47586256 - 47586218
Alignment:
Q  645 cctcggcagttaactgccgaaattcaatttaatccatcg 683  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  47586256 cctcggcagttaactgccgaaattcaattaaatccatcg 47586218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 16123397 - 16123284
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | ||||| ||||| ||||||||| ||||| |   ||||||||| ||||  ||||||||||||| || |||||||||   ||| || ||    
T  16123397 gatttatttggcaaacggaagaaaaaatgagggactaaaacgtgaattttattaattgtggaaccaaaatgaaaactttaaattatttagaggatcaatg 16123298  T
Q  525 gatcaaataagcct 538  Q
     |||||||||||||    
T  16123297 aatcaaataagcct 16123284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 686
Target Start/End: Original strand, 47585651 - 47585692
Alignment:
Q  645 cctcggcagttaactgccgaaattcaatttaatccatcggca 686  Q
    ||||||||||||||| ||||||||||||| ||||||||||||    
T  47585651 cctcggcagttaacttccgaaattcaattaaatccatcggca 47585692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 689
Target Start/End: Original strand, 50268514 - 50268551
Alignment:
Q  652 agttaactgccgaaattcaatttaatccatcggcactt 689  Q
    |||||||||||||||| |||||||||||||||||||||    
T  50268514 agttaactgccgaaatccaatttaatccatcggcactt 50268551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 539
Target Start/End: Original strand, 33369247 - 33369315
Alignment:
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctt 539  Q
    ||||||||| | || |||||||||||| | ||||||||| ||  | |||||||||||||||||||||||    
T  33369247 ttttattaattatgggaccaaaatgaatacttgaaattaattaggagaccattggatcaaataagcctt 33369315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 407
Target Start/End: Complemental strand, 34350276 - 34350240
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttggg 407  Q
    |||||||||||||| ||||||||||||||||||||||    
T  34350276 cactcttaaggttgatccaccatagacatcatttggg 34350240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 668
Target Start/End: Original strand, 42290267 - 42290314
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  42290267 acacgagtaaattactcaaatgcc-ccttggcagttaactgccgaaatt 42290314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 380
Target Start/End: Complemental strand, 12666003 - 12665944
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaag 380  Q
    |||||||||||||||| |||| ||||||||||||||| |||| | |||| ||||||||||    
T  12666003 aaaagatcaaacggtttaaattaacaaaattaataagatctatggtggaccactcttaag 12665944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 365
Target Start/End: Complemental strand, 38281042 - 38280999
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacg 365  Q
    ||||||||||||||||||||| || ||||||||||| |||||||    
T  38281042 aaaagatcaaacggttaaaataaaaaaaattaataaagtctacg 38280999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 509
Target Start/End: Complemental strand, 42244712 - 42244657
Alignment:
Q  454 agggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||||||||||||||  |||||||||| | || || |||||||||||||||||||||    
T  42244712 agggaccaaaacatgagttttattaattatgggatcaaaatgaaaatttgaaatta 42244657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 13535646 - 13535604
Alignment:
Q  647 tcggcagttaactgccgaaattcaatttaatccatcggcactt 689  Q
    |||||||||||||| |||||| ||||||||| |||||||||||    
T  13535646 tcggcagttaactgtcgaaatccaatttaattcatcggcactt 13535604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 620 - 662
Target Start/End: Complemental strand, 13761146 - 13761105
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgcc 662  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  13761146 acacgagtaaattactcaaatgcc-cctcggcagttaactgcc 13761105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 19914436 - 19914481
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  19914436 cacacgagtaaattactcaaatgcc-cctcggcagttaacttccgaa 19914481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 399
Target Start/End: Original strand, 52078047 - 52078125
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacat 399  Q
    |||| |||||||||||||||| || | |||||||| | |||| | || | |||||||||||||||| ||||||||||||    
T  52078047 aaaaaatcaaacggttaaaattaaaataattaataggatctatggtgtatcactcttaaggttggttcaccatagacat 52078125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 665
Target Start/End: Complemental strand, 19915417 - 19915373
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    |||| ||||||||||||||||||| | |||||||||||||||||||    
T  19915417 acacgagtaaattactcaaatgcc-cttcggcagttaactgccgaa 19915373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 521
Target Start/End: Complemental strand, 20064255 - 20064190
Alignment:
Q  456 ggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    |||||||||| | |||||||||| || || ||||||||||||||   ||||||| |||||||||||    
T  20064255 ggaccaaaacgtgtgttttattagatatgggaccaaaatgaaaacgggaaattaattgagggacca 20064190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 21507277 - 21507229
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac 371  Q
    |||||||||||||| | |||| || |||||||||||||||||||||||||    
T  21507277 aaaagatcaaacggctgaaattaa-aaaattaataaggtctacgatggac 21507229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 619 - 664
Target Start/End: Original strand, 43011797 - 43011841
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccga 664  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||    
T  43011797 cacacgagtaaattactcaaatacc-cctcggcagttaactgccga 43011841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 619 - 664
Target Start/End: Original strand, 47652697 - 47652741
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccga 664  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||    
T  47652697 cacacgagtaaattactcaaatgtc-cctcggcagttaactgccga 47652741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 399
Target Start/End: Complemental strand, 48492925 - 48492864
Alignment:
Q  338 aaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacat 399  Q
    ||||| ||||||||||||||| |||||| |||||  |  ||| |||||||||||||||||||    
T  48492925 aaaattaacaaaattaataagatctacggtggaccattataatgttggtccaccatagacat 48492864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 665
Target Start/End: Complemental strand, 49429237 - 49429193
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    |||| |||||||||||||||||| || |||||||||||||||||||    
T  49429237 acacgagtaaattactcaaatgc-tcttcggcagttaactgccgaa 49429193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 371 - 543
Target Start/End: Complemental strand, 49801781 - 49801609
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttg-ggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    |||| |||||||||||  ||| || |||||||||| ||||||| ||||| |||  ||||||||||| | || |||  |||  ||||||| |||||||       
T  49801781 cacttttaaggttggtttaccgtaaacatcatttgaggttaaaattaacagtcg-gatttatttggcaaacagagacaaacgtgagggatcaaaacacca 49801683  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagccttaaaa 543  Q
     ||||||||| |||| ||||||||||||||| | ||||||  | ||||||||   |||| ||||||||| ||||    
T  49801682 tttttattaattgtgggaccaaaatgaaaatataaaattaaataagggaccaaatgatctaataagcctaaaaa 49801609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 665
Target Start/End: Original strand, 50036818 - 50036862
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  50036818 acacaagtaaattactcaaatgtc-cctcggcagttaactgccgaa 50036862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 9e-66; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 322 - 539
Target Start/End: Original strand, 325089 - 325305
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  || | |||||||||||| |    
T  325089 aaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactattaaggttggtccaccatagacat--ttagagttaaagttaacag 325186  T
Q  421 tcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacc 520  Q
    ||  ||||||||||| | |||||||||||  |||||||||||||  || |||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  325187 tcgggatttatttggcaaacggaggaaaacttgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacc 325286  T
Q  521 attggatcaaataagcctt 539  Q
    ||| |||||||||||||||    
T  325287 attagatcaaataagcctt 325305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 306 - 541
Target Start/End: Original strand, 27705202 - 27705438
Alignment:
Q  306 gatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcattt 404  Q
    ||||||||||||| | |||| ||||||||||| |||| || || ||||||| | |||| | ||||| ||| |||||||||||||||||||||||||||||    
T  27705202 gatcatcttttaataaaaaatatcaaacggtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccaccatagacatcattt 27705301  T
Q  405 gggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttga 504  Q
    || ||||||||||| |||   |||||||||| | | |||||||||| |||||||||||||| || |||||||||| |||  |||||||||||||| ||||    
T  27705302 ggattaaagttaactgtctgtatttatttggcaaaaggaggaaaatctgagggaccaaaacgtacgttttattaattgtatgaccaaaatgaaaacttga 27705401  T
Q  505 aattatttgagggaccattggatcaaataagccttaa 541  Q
    |||||||||||| ||||||| |||||||||| |||||    
T  27705402 aattatttgaggaaccattgaatcaaataagtcttaa 27705438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 322 - 535
Target Start/End: Complemental strand, 39604068 - 39603853
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttggg-ttaaagttaacc 419  Q
    |||| ||||||| ||| |||| || | |||||||| | |||| | |||| |||| |||||||||||| ||||||||||||||||||| ||||| |||||     
T  39604068 aaaaaatcaaacagtttaaattaaaataattaataggatctatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaaca 39603969  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    |||||||||||||||| | |||||||||||| |||||||||||||| || |||||||||| |||| || ||||||||||| ||||||||||||||||||     
T  39603968 gtcatgatttatttggcaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggat 39603869  T
Q  520 cattggatcaaataag 535  Q
    || |||||||||||||    
T  39603868 caatggatcaaataag 39603853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 371 - 539
Target Start/End: Complemental strand, 22047897 - 22047728
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgg-gttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    |||||||||||||| ||||||||||||||||||| | |||||| ||||| | || ||||||||||| | ||||||||||| ||||||||||||||| ||     
T  22047897 cactcttaaggttgatccaccatagacatcatttagagttaaacttaacagccaggatttatttggcaaacggaggaaaaaatgagggaccaaaacgtac 22047798  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctt 539  Q
    |||||||||| |||| |||||||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  22047797 gttttattaattgtgggaccaaaatgaaaacttgaaattaattaagggaccattggatcaaataagcctt 22047728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 327 - 539
Target Start/End: Original strand, 30859078 - 30859292
Alignment:
Q  327 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttggg-ttaaagttaaccgtcat 424  Q
    ||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||     
T  30859078 atcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcatttggggttaaacttaacggtcaa 30859177  T
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    || |||||||| | || ||||||||| ||||||||  |||| || |||||||||| |||| |||||||||||||| ||||||||||||||||||| | ||    
T  30859178 gacttatttggcaaacagaggaaaatgtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggactaatg 30859277  T
Q  525 gatcaaataagcctt 539  Q
     ||||||||||||||    
T  30859278 aatcaaataagcctt 30859292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 325 - 534
Target Start/End: Original strand, 39605375 - 39605584
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actctt-aaggttggtccaccatagacatcatttgggttaaagttaaccgtc 422  Q
    ||||| ||||| |||||| || |||||||||||||||||| || ||| ||| || ||| ||||||||||||| ||||  ||   ||| ||||||||||||    
T  39605375 agatcgaacggataaaattaagaaaattaataaggtctaccatagaccactttttaagattggtccaccatatacat--ttaaagttgaagttaaccgtc 39605472  T
Q  423 atgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccat 522  Q
    | ||||||||||| | |||||||||||| |||||||||||||| ||||||||||||| |||| |||||||||||||| ||||||||| ||   |||||||    
T  39605473 aggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggaccat 39605572  T
Q  523 tggatcaaataa 534  Q
    || |||||||||    
T  39605573 tgaatcaaataa 39605584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 287 - 538
Target Start/End: Complemental strand, 30910990 - 30910738
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    ||||||||| |||||||||| |  |||||||||  ||||  |||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||||    
T  30910990 tagacatgcctaattcaatggttctcttttaaagaaaaac-tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttgg 30910892  T
Q  386 tccaccatagacatcatttgg-gttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtg 484  Q
    ||||||| ||||||||||||| |||||||||||| |||  ||||||||||||| || ||||||||| |||||||| |||||     ||||||||| ||||    
T  30910891 tccaccaaagacatcatttggtgttaaagttaacagtcgagatttatttggtaaacagaggaaaatgtgagggactaaaacgccatttttattaattgtg 30910792  T
Q  485 agaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
     ||||||||||||||  ||||||||  | ||||||||   |||| |||||||||    
T  30910791 ggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 30910738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 287 - 538
Target Start/End: Original strand, 22308667 - 22308918
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    |||||||||||||| ||||| ||||||||| ||| || |||||||| |||| | || || ||| ||||||| ||||| | ||||| ||||||||||| ||    
T  22308667 tagacatgcataatccaatggtcatctttttaaaaaacagatcaaatggtttacattaaaaaatttaataatgtctatggtggaccactcttaaggtagg 22308766  T
Q  386 tccaccatagacatcatttgggttaaagttaaccgtcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtg 484  Q
    ||||||||||||||  || |||||||| |||||   |||| |||||||||| | |||||| ||||| |||||||| |||||   ||||||||||| | ||    
T  22308767 tccaccatagacat--ttggggttaaacttaacaaccatggatttatttggcaaacggagcaaaatgtgagggactaaaacgcctgttttattaattatg 22308864  T
Q  485 agaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
     ||||||||||||||  |||||||||||  |||||||   |||| |||||||||    
T  22308865 ggaccaaaatgaaaacatgaaattatttaggggaccaaacgatctaataagcct 22308918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 347 - 537
Target Start/End: Complemental strand, 30857987 - 30857798
Alignment:
Q  347 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggagg 445  Q
    ||||||||||||||||  ||| ||| ||| |||||||||||||| |||||||||  ||   |||||||||||| || | ||||||||||  | | |||||    
T  30857987 aaaattaataaggtctctgatagaccacttttaaggttggtccatcatagacat--ttaaagttaaagttaactgttaagatttatttgacaaaaggagg 30857890  T
Q  446 aaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    ||||| ||| ||||||||||||| |||||||||| |||| |||||||||||||| || |||||| ||   ||||||||| ||||||||||||    
T  30857889 aaaatctgaaggaccaaaacatacgttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggaccattgaatcaaataagcc 30857798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 374 - 521
Target Start/End: Complemental strand, 8521414 - 8521269
Alignment:
Q  374 tcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttt 473  Q
    ||||||||||||||||||||| ||||  || ||||||||||||||||||  ||||||||||    ||||||  |||  ||||||||||||||||  ||||    
T  8521414 tcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggaccaaaacatgagttt 8521317  T
Q  474 tattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    |||||  | || |||||||||||||| ||||||||| || ||||||||    
T  8521316 tattagttatgggaccaaaatgaaaacttgaaattaattaagggacca 8521269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 371 - 521
Target Start/End: Original strand, 1010318 - 1010466
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatg 470  Q
    |||||||||||||||||||||||| ||||  || ||||||||||||||||||  ||||||||||    ||||||  |||  ||||||||||||||||  |    
T  1010318 cactcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggaccaaaacatgag 1010415  T
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    ||||||||  | || ||||||||| |||| ||||||||| || ||||||||    
T  1010416 ttttattagttatgggaccaaaataaaaacttgaaattaattaagggacca 1010466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 293 - 423
Target Start/End: Complemental strand, 1102859 - 1102731
Alignment:
Q  293 tgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccacc 391  Q
    |||||||| || || ||||| ||||||| |||||||||||||||| |||| || | |||||||||| |||| | ||||| |||||||||||||||| |||    
T  1102859 tgcataatccactggtcatcatttaaaa-aaaagatcaaacggtttaaattaaaataattaataagatctatggtggaccactcttaaggttggtctacc 1102761  T
Q  392 atagacatcatttgggttaaagttaaccgtca 423  Q
    ||||||||  || |||||||||||||| ||||    
T  1102760 atagacat--ttggggttaaagttaacagtca 1102731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 322 - 538
Target Start/End: Original strand, 33173862 - 33174079
Alignment:
Q  322 aaaagatcaaacggttaaaatg-aacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaacc 419  Q
    |||||||||||||||||||||  || ||||||||| | ||||| | | ||| ||||||||||||||||||||||||||||  || |||||||| |||||     
T  33173862 aaaagatcaaacggttaaaatttaaaaaaattaatgaagtctatggtagaccactcttaaggttggtccaccatagacat--ttggggttaaacttaaca 33173959  T
Q  420 gtc-atgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
    | | | ||||||||||| | || ||||||||  |||||||| |||||     |||||||||||||| || |||||||||||  ||||||||  | |||||    
T  33173960 gccaaggatttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaaatgtgggatcaaaatgaaaacatgaaattaaataaggga 33174059  T
Q  519 ccattggatcaaataagcct 538  Q
    |||   |||| |||||||||    
T  33174060 ccaaacgatctaataagcct 33174079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 374 - 535
Target Start/End: Complemental strand, 15548399 - 15548240
Alignment:
Q  374 tcttaaggttggtccaccatagacatcattt-gggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgtt 472  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||| | || ||||||||||| | ||||||||||| ||||||||| |||   |   ||    
T  15548399 tcttaaggttggtccaccagagacatcatttagggttaaacttaacaggcaggatttatttggcaaacggaggaaaa-atgagggactaaatagtgaatt 15548301  T
Q  473 ttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataag 535  Q
    ||||||| | || ||  ||||  |||||||||||||||||  ||||||| |||||||||||||    
T  15548300 ttattaattatgggataaaaa--aaaatttgaaattatttaggggaccaatggatcaaataag 15548240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 322 - 521
Target Start/End: Complemental strand, 32758039 - 32757839
Alignment:
Q  322 aaaagatcaaacggttaaaat-gaacaaaattaataaggtctacgatggacactctta-aggttggtccaccatagacatcatttgggttaaagttaacc 419  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||| | |||||  |||   | |||||||||||||||||||  || ||||||||||||||     
T  32758039 aaaagatcaaagggttaaaattgaaaaaaattaataaggtctatggtggactatctaccatgttggtccaccatagacat--ttggggttaaagttaaca 32757942  T
Q  420 gtcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
      |||| |||||||||     ||||||  ||  ||||||||||||||||  |||||||||  | || |||||||||||||| | ||||||||||||||||    
T  32757941 cccatggatttatttgaccggcggaggtgaacttgagggaccaaaacatgagttttattatttatgggaccaaaatgaaaactggaaattatttgaggga 32757842  T
Q  519 cca 521  Q
    |||    
T  32757841 cca 32757839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 537
Target Start/End: Original strand, 22049142 - 22049254
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||  | || ||||||||  |||||||||||||| || |||||||||| | || |||||||||||||| ||||||||||||  ||||| | ||    
T  22049142 gatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattatttaggggactaatg 22049241  T
Q  525 gatcaaataagcc 537  Q
    | |||||||||||    
T  22049242 gttcaaataagcc 22049254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 344 - 509
Target Start/End: Original strand, 30912088 - 30912252
Alignment:
Q  344 aacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacgg 442  Q
    |||||||||||||||||||| |||| || ||| ||||||||||||||||||||| ||  || | ||||||||||||  |   ||||||||||| | ||||    
T  30912088 aacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatat--ttggagttaaagttaacacttgggatttatttggcaaacgg 30912185  T
Q  443 aggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    || ||||  |||||||| |||||     ||||||||| |||| ||||||||||||||  ||||||||    
T  30912186 agaaaaaggtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 30912252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 476 - 536
Target Start/End: Original strand, 41798004 - 41798064
Alignment:
Q  476 ttaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagc 536  Q
    |||| |||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||||    
T  41798004 ttaattgtgggaccaaaataaaaacttgaaattatttgagggaccaatggatcaaataagc 41798064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 399
Target Start/End: Complemental strand, 324252 - 324174
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacat 399  Q
    |||| ||||||||||||| || |||  ||||||||||||||| |||||| |||| |||| |||||||||||||||||||    
T  324252 aaaaaatcaaacggttaagattaacgcaattaataaggtctatgatggaccactattaaagttggtccaccatagacat 324174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 686
Target Start/End: Complemental strand, 4906909 - 4906868
Alignment:
Q  645 cctcggcagttaactgccgaaattcaatttaatccatcggca 686  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  4906909 cctcggcagttaactgctgaaattcaattaaatccatcggca 4906868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 509
Target Start/End: Original strand, 8523732 - 8523836
Alignment:
Q  405 gggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttga 504  Q
    |||||||||||||| |||| ||||||||||    ||||||  ||| |||| ||| ||||||||  |||||||||  | || |||||||||||||| ||||    
T  8523732 gggttaaagttaactgtcaggatttatttgactgacggagacaaacatgaaggatcaaaacatgagttttattagttatgggaccaaaatgaaaacttga 8523831  T
Q  505 aatta 509  Q
    |||||    
T  8523832 aatta 8523836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 668
Target Start/End: Original strand, 30192463 - 30192510
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  30192463 acacgagtaaattactcaaatgcc-cttcggcagttaactgccgaaatt 30192510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 204477 - 204520
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccg 663  Q
    |||||||||| ||||||||||||| | |||||||||||||||||    
T  204477 acaccagtaatttactcaaatgccccttcggcagttaactgccg 204520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 5746 - 5791
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  5746 cacacgagtaaattactcaaacgcc-cctcggcagttaactgccgaa 5791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 3891453 - 3891498
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||    
T  3891453 cacacgagtaaattactcaaatacc-cctcggcagttaactgccgaa 3891498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 3892540 - 3892495
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||    
T  3892540 cacacgagtaaattactcaaatgtc-cctcggcagttaactgccgaa 3892495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 651 - 689
Target Start/End: Original strand, 17047010 - 17047048
Alignment:
Q  651 cagttaactgccgaaattcaatttaatccatcggcactt 689  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  17047010 cagttaactgccgaaatccaatttaatccatcgacactt 17047048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 30711263 - 30711218
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  30711263 cacacaagtaaattacgcaaatgc-tcctcggcagttaactgccgaa 30711218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 665
Target Start/End: Complemental strand, 8539618 - 8539574
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    |||| |||||||||||||||| || |||||||||||||||||||||    
T  8539618 acacaagtaaattactcaaatacc-cctcggcagttaactgccgaa 8539574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 466 - 535
Target Start/End: Complemental strand, 11262325 - 11262256
Alignment:
Q  466 atatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataag 535  Q
    |||||||||||||| |||| ||| |||||||||| || |||||||||  || |||| ||||| |||||||    
T  11262325 atatgttttattaattgtgggactaaaatgaaaacttaaaattatttagggaaccaatggataaaataag 11262256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 665
Target Start/End: Complemental strand, 11348577 - 11348533
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||    
T  11348577 acacgagtaaattactcaaatgt-tcctcggcagttaactgccgaa 11348533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 20539249 - 20539290
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtcta 363  Q
    |||||||||||||||| |||| || |||||||||||||||||    
T  20539249 aaaagatcaaacggtttaaattaaaaaaattaataaggtcta 20539290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 509
Target Start/End: Complemental strand, 26047896 - 26047839
Alignment:
Q  452 tgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    |||||||| |||||||  |||||||||  | |||||||||||| ||||||||||||||    
T  26047896 tgagggactaaaacatgagttttattagttatgagaccaaaataaaaatttgaaatta 26047839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 8e-60; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 285 - 538
Target Start/End: Complemental strand, 18197389 - 18197144
Alignment:
Q  285 attagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttg 384  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||||| ||||||       |||||||    
T  18197389 attagacatgtataatccaatggtcatcttttaaaacaaaagatgaagcggttaaaattaacaaaattaataaggtctatgatgga-------aaggttg 18197297  T
Q  385 gtccaccatagacatcatttgg-gttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgt 483  Q
    || |||||||||  |  ||||| |||||||||||| |||  ||||||||||| | ||||||||||| ||||||||||||||  || |||||||||| |||    
T  18197296 gttcaccatagatgt--tttggagttaaagttaacggtctggatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgt 18197199  T
Q  484 gagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    | ||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  18197198 gggaccaaaatgaaaatttgaaattatttgagggacatttggatcaaataagcct 18197144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 18197673 - 18197534
Alignment:
Q  18 ggagaagttgttaaggaggaagagaagaggtgcattattaagagaggatttaaaaatgaagattgagttgtaaagtgggtgaacggatctgtgtgtaaaa 117  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||| |||||| |    
T  18197673 ggagaagttgttaaggaggaagagaataggtggattattaagagagtatttacaaatgaagattgagttgtaaagttggtgaacgaatctgagtgtaata 18197574  T
Q  118 ttgtgagaatagatagattaatgggtttggttgggtggag 157  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18197573 ttgtgagaatagatagattaatgggtttggttgggtggag 18197534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 325 - 538
Target Start/End: Complemental strand, 40244395 - 40244184
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||   ||   |||||||||||| ||||    
T  40244395 agatcaaagagttaaaattaacaaaattaataaggtctacgatggaccacttttaagtttggtccaccatagacac--ttgaagttaaagttaactgtca 40244298  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
      ||| |||||| | |||||||||||| |||||||||||||  || |||||||||| ||||||||||||||||||| |||||||||||| |||||||| |    
T  40244297 aaatt-atttggcaaacggaggaaaatttgagggaccaaaatgtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttaagggaccaat 40244199  T
Q  524 ggatcaaataagcct 538  Q
    |||||||||||||||    
T  40244198 ggatcaaataagcct 40244184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 371 - 538
Target Start/End: Original strand, 38242468 - 38242635
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatg 470  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| || | ||||||||||| | || ||  ||||  |||||||||||||  || |    
T  38242468 cactcttaaggttggtccaccatagacatcatttgagttaaacttaactgtgaggatttatttggcaaacagataaaaaagtgagggaccaaaaggtacg 38242567  T
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    ||||||||| |||| || ||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  38242568 ttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggacctttgaatcaaataagcct 38242635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 322 - 539
Target Start/End: Original strand, 53624266 - 53624481
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| |||||||||||||| ||||  || ||||||||  ||||||    
T  53624266 aaaagatcaaaaggttaaaattga-aaaattaataaggtctatggtggactatctataatgttggtccaccatatacat--ttggggttaaacctaaccg 53624362  T
Q  421 tcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacc 520  Q
    ||  ||||||||||| | || ||| ||||  |||| ||||||||  || |||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  53624363 tctggatttatttggcaaaccgagaaaaaagtgagtgaccaaaatgtacgttttattaattgtgagatcaaaatgaaaacttgaaattatttgagggacc 53624462  T
Q  521 attggatcaaataagcctt 539  Q
    |||||||||||||||||||    
T  53624463 attggatcaaataagcctt 53624481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 325 - 538
Target Start/End: Complemental strand, 38241114 - 38240903
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcat 424  Q
    ||||| || ||||||||| ||||||||||||||| ||||||||||||  | || | |||||| ||||||||||||  || | |||||| ||||| | |      
T  38241114 agatcgaatggttaaaattaacaaaattaataagctctacgatggaccatttttaagttggttcaccatagacat--ttggagttaaacttaacagccgg 38241017  T
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||||||||| ||| ||||  |||| || |||||||||| |||| ||||||||| ||||||||||||||||  |||||||| ||    
T  38241016 gatttatttggcaaacggaggaaaatctgaaggacttaaacgtacgttttattaattgtgggaccaaaataaaaatttgaaattattcaagggaccaatg 38240917  T
Q  525 gatcaaataagcct 538  Q
    ||||||||||||||    
T  38240916 gatcaaataagcct 38240903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 325 - 537
Target Start/End: Complemental strand, 34818295 - 34818084
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| |||||||||||| |||||||||||||||||||| ||| || || | ||||||||| || |||||||||||  ||   ||||||||||||  |      
T  34818295 agatcgaacggttaaaattaacaaaattaataaggtctatgatagatcatttttaaggttgatcaaccatagacat--ttaaagttaaagttaactattg 34818198  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
     ||||||||||| | | |||||||||| |||||||||||| |||| |||||||||| |||| |||||||||||||| ||||||||| ||   ||||||||    
T  34818197 ggatttatttggcaaatggaggaaaatctgagggaccaaatcatacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggaccatt 34818098  T
Q  524 ggatcaaataagcc 537  Q
    | ||||||||||||    
T  34818097 gaatcaaataagcc 34818084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 322 - 537
Target Start/End: Original strand, 12107882 - 12108101
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcattt-gggttaaagttaa-- 417  Q
    |||||||||||||||| | || || ||||  |||| |||||| | ||||| ||| ||||||||||||||||||| | ||||||| |||||||| ||||      
T  12107882 aaaagatcaaacggtttatattaaaaaaaa-aatagggtctatggtggaccacttttaaggttggtccaccataaatatcatttggggttaaatttaaca 12107980  T
Q  418 -ccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagg 516  Q
     |||| ||   |||||||| | |||||||||||  ||||||||||||| |||||||||||||  |||| |||||||||||||| |||||||||||| |||    
T  12107981 cccgtgatttattatttggcaaacggaggaaaaagtgagggaccaaaatatatgttttattagttgtgggaccaaaatgaaaacttgaaattatttaagg 12108080  T
Q  517 gaccattggatcaaataagcc 537  Q
    ||| |||| ||||||||||||    
T  12108081 gactattgaatcaaataagcc 12108101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 371 - 538
Target Start/End: Complemental strand, 53622827 - 53622659
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||   |||||| |||| | |||||||||||| | ||||| ||||| ||||    
T  53622827 cactcttaaggttggtccaccatagacatcatttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaatctaagggatcaaaatatat 53622728  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
     ||||||||| |||| |||||||||||| | |  |||||| | ||||||| | |||||| |||||||||    
T  53622727 tttttattaattgtgcgaccaaaatgaataatgaaaattaatcgagggacgaatggatctaataagcct 53622659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 373 - 499
Target Start/End: Original strand, 10732083 - 10732209
Alignment:
Q  373 ctcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgtt 472  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||   |||||||||||| |||||||||||| |||||||| |||||     ||    
T  10732083 ctctaaaggttggtccaccatagacatcatttgggttaaacttaaccgtcggaatttatttggtaaacggaggaaaatgtgagggactaaaacgccattt 10732182  T
Q  473 ttattaaatgtgagaccaaaatgaaaa 499  Q
    ||||||| | || ||||||||||||||    
T  10732183 ttattaattatgggaccaaaatgaaaa 10732209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 297 - 512
Target Start/End: Complemental strand, 42685114 - 42684899
Alignment:
Q  297 taattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatag 395  Q
    |||||||||| ||||||||| ||| || ||||||||||||| |||| || ||| |||||||||| || | |||| |||||||||| ||||| ||||||||    
T  42685114 taattcaatggtcatctttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccatag 42685015  T
Q  396 acatcatttgggttaaagttaaccgtc-atgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaat 494  Q
    ||||  || |||||||| ||||| ||| | ||||||||||||| ||  || |||| ||||||||| ||||| |  |||||||| | | ||  ||||||||    
T  42685014 acat--ttggggttaaacttaacagtcaaggatttatttggtaaacatagaaaaaaatgagggactaaaacgtcagttttattcattatggaaccaaaat 42684917  T
Q  495 gaaaatttgaaattattt 512  Q
    ||||| || |||||||||    
T  42684916 gaaaacttaaaattattt 42684899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 371 - 539
Target Start/End: Complemental strand, 3208648 - 3208480
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    |||||||||||||||||||||||| | |||||||||| ||||| ||||| || | ||||||||||  | ||||||||||| || ||||| |||||| ||     
T  3208648 cactcttaaggttggtccaccata-atatcatttggggttaaacttaacggtaaggatttatttgacaaacggaggaaaaaataagggatcaaaacgtac 3208550  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctt 539  Q
    |||||||||| | || |||||||||||||| | ||||||| ||   |||||| ||||| |||||||||||    
T  3208549 gttttattaattatgggaccaaaatgaaaaatggaaattaattagaggaccaatggattaaataagcctt 3208480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 425 - 538
Target Start/End: Original strand, 50810840 - 50810953
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | ||||||||||| ||||||||| ||||| | ||||||||||| | || |||||||||||||| |||||||||||| |||||||| ||    
T  50810840 gatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 50810939  T
Q  525 gatcaaataagcct 538  Q
    |||| | |||||||    
T  50810940 gatctattaagcct 50810953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 50865024 - 50864911
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | ||||||||||| ||||||||| ||||| | ||||||||||| | || |||||||||||||| |||||||||||| |||||||| ||    
T  50865024 gatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 50864925  T
Q  525 gatcaaataagcct 538  Q
    |||| | |||||||    
T  50864924 gatctattaagcct 50864911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 423 - 539
Target Start/End: Original strand, 36176510 - 36176627
Alignment:
Q  423 atgatttatttggtatacggaggaaaata-tgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    ||||||||||||| | || |||||||| | |||||||||||||||||  ||||||||| |||| ||||||||||||||  |||||||| |   |||||||    
T  36176510 atgatttatttggcaaacagaggaaaaaaatgagggaccaaaacatacattttattaattgtgggaccaaaatgaaaacatgaaattaatcaggggacca 36176609  T
Q  522 ttggatcaaataagcctt 539  Q
    ||||||||||||||||||    
T  36176610 ttggatcaaataagcctt 36176627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 510
Target Start/End: Original strand, 40745384 - 40745557
Alignment:
Q  336 ttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttg 434  Q
    ||||||| ||||||||||||||||||||||||| || ||| ||||||||| | || |||| ||||  || |  ||||||||||| |||| |||||||||     
T  40745384 ttaaaattaacaaaattaataaggtctacgatgaaccacttttaaggttgatacatcataaacat--ttggaattaaagttaacggtcaagatttatttt 40745481  T
Q  435 gtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattat 510  Q
    | | ||  |||||||| ||||||| ||||||  | ||||||| || ||||||||||||||||||| || |||||||    
T  40745482 gcaaacaaaggaaaatctgagggatcaaaacgaaagttttatcaattgtgagaccaaaatgaaaacttaaaattat 40745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 325 - 509
Target Start/End: Original strand, 35372066 - 35372248
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| |||| ||||  |||||||| ||||||   ||||||   | |||||||| || |    
T  35372066 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtccaacataga---catttgaagttaagttaacagtaa 35372162  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
     ||||||||||| | || ||||||||  |||||||| |||||     ||||||||| |||||||||||||||||||  ||||||||    
T  35372163 ggatttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaatta 35372248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 544
Target Start/End: Complemental strand, 37735416 - 37735297
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||  | ||| || |||| ||||||||| |||||||| |||||||||| | || |||||||||||||| || ||||||||| | |||||| ||    
T  37735416 gatttatttgacaaacgaagaaaaaaatgagggactaaaacatacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccaatg 37735317  T
Q  525 gatcaaataagccttaaaat 544  Q
    |||||||||||||| |||||    
T  37735316 gatcaaataagcctaaaaat 37735297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 425 - 539
Target Start/End: Complemental strand, 53187668 - 53187555
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | ||||| |||||  |||||||||||| ||||  ||||||||| ||| ||| ||||||||||| ||||||||||||  |||||||||     
T  53187668 gatttatttggcaaacggaagaaaaagtgagggaccaaa-catacattttattaattgtaagatcaaaatgaaaacttgaaattatttaggggaccattc 53187570  T
Q  525 gatcaaataagcctt 539  Q
    |||||||||||||||    
T  53187569 gatcaaataagcctt 53187555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 469 - 538
Target Start/End: Original strand, 3209981 - 3210050
Alignment:
Q  469 tgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  3209981 tgttttattaattgtgggaccaaaatgaaaatttaaaattatttaagggaccattgaatcaaataagcct 3210050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 335 - 509
Target Start/End: Complemental strand, 27838118 - 27837946
Alignment:
Q  335 gttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttattt 433  Q
    |||||||| ||||||||||||||||||||||||||| |||| ||||  |||||| ||||||||   ||||||   | |||||||| |||| |||||||||    
T  27838118 gttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtctaccataga---catttgaagttaagttaacagtcaggatttattt 27838022  T
Q  434 ggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    || | |||||||||||  |||||||| |||||      |||||||| |||| ||||||||||||||  ||||||||    
T  27838021 ggcaaacggaggaaaaggtgagggactaaaacgccatatttattaattgtgggaccaaaatgaaaacatgaaatta 27837946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 427 - 540
Target Start/End: Original strand, 37736089 - 37736202
Alignment:
Q  427 tttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattgga 526  Q
    ||||||||| | |||||| ||||  |||||||| ||||| || |||||||||| |||||||||||||||||||  ||||||||||| |||||| | || |    
T  37736089 tttatttggcaaacggagaaaaaagtgagggactaaaacgtacgttttattaattgtgagaccaaaatgaaaacatgaaattatttaagggactaatgaa 37736188  T
Q  527 tcaaataagcctta 540  Q
    ||| ||||||||||    
T  37736189 tcacataagcctta 37736202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 50809531 - 50809418
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||||||||  |||||||| ||||| | ||||||||||| | || |||||||||||||| |||||||||||| |||||||| |     
T  50809531 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaata 50809432  T
Q  525 gatcaaataagcct 538  Q
    |||| | |||||||    
T  50809431 gatctattaagcct 50809418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 538
Target Start/End: Original strand, 50866331 - 50866444
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||||||||  |||||||| ||||| | ||||||||||| | || |||||||||||||| |||||||||||| |||||||| |     
T  50866331 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaata 50866430  T
Q  525 gatcaaataagcct 538  Q
    |||| | |||||||    
T  50866431 gatctattaagcct 50866444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 317 - 538
Target Start/End: Original strand, 53194769 - 53194989
Alignment:
Q  317 aaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagtt 415  Q
    |||| |||| |||||| ||||||||| || ||||||||| | ||||| | |||||  ||| ||| ||  |||||||||||||||  |||| |||||| ||    
T  53194769 aaaaaaaaaaatcaaatggttaaaataaa-aaaattaatgaagtctatggtggactatctataatgtgagtccaccatagacat--tttgagttaaactt 53194865  T
Q  416 aaccgtcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttga 514  Q
    ||| | |||| |||||||||| | |  ||||||||  |||||||||||||| || |||||||||| | || |||||||||||||| |||||||||||  |    
T  53194866 aacagacatggatttatttggcaaatagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattattcaa 53194965  T
Q  515 gggaccattggatcaaataagcct 538  Q
    | || ||||| || ||||||||||    
T  53194966 gagatcattgaattaaataagcct 53194989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 425 - 534
Target Start/End: Original strand, 18458663 - 18458772
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||||||||  |||||||| |||||  | |||||||||| |||| ||||||||| |||| ||||||||||||  ||||| | ||    
T  18458663 gatttatttggcaaacggaggaaaaagtgagggactaaaacgcaagttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaatg 18458762  T
Q  525 gatcaaataa 534  Q
    ||||||||||    
T  18458763 gatcaaataa 18458772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 371 - 509
Target Start/End: Original strand, 3455577 - 3455715
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttggg---ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacat 467  Q
    |||||||||||||||||||||||| ||||  ||||||   ||||||||||| |||| ||||||||||    ||||||  ||| |||| ||||||||||||    
T  3455577 cactcttaaggttggtccaccata-acat--tttggggggttaaagttaactgtcaggatttatttgactgacggagacaaacatgaaggaccaaaacat 3455673  T
Q  468 atgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
      |||||||||  | ||||||||||||||||| |||||||||    
T  3455674 gagttttattagttatgagaccaaaatgaaaacttgaaatta 3455715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 287 - 509
Target Start/End: Complemental strand, 26886520 - 26886298
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    |||||||||||||| ||||| |   ||||||||| |||| ||||||||||| |||| || | |||||||| | | || | ||||| ||||||||||||||    
T  26886520 tagacatgcataatccaatggttcccttttaaaaaaaaa-atcaaacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttgg 26886422  T
Q  386 tccaccatagacatcatttg-ggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtg 484  Q
    | |||| || |||||||||| |||| || ||||| |||  ||||||||||| | || |||  |||  ||||||| |||||||    ||||||||| |||     
T  26886421 ttcaccgtaaacatcatttgaggttgaaattaacagtcg-gatttatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgtt 26886323  T
Q  485 agaccaaaatgaaaatttgaaatta 509  Q
    |||||||||||||||| ||||||||    
T  26886322 agaccaaaatgaaaatatgaaatta 26886298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 422
Target Start/End: Complemental strand, 35371132 - 35371020
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggtt 409  Q
    |||||| ||| |||| ||||||  |||||||| || | |||||||| | |||| | ||||| ||||||||||||||||||||||| |||||||||||| |    
T  35371132 tctttttaaaaaaaaaatcaaaaagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcatttgggct 35371033  T
Q  410 aaagttaaccgtc 422  Q
    ||| |||||||||    
T  35371032 aaacttaaccgtc 35371020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 3209873 - 3209948
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacat 399  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||| | | ||||||||||||||||||| ||||    
T  3209873 agatcaaatggttaaaattaacaaaattaataaggtttacgatggactatttttaaggttggtccaccatatacat 3209948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 322 - 542
Target Start/End: Complemental strand, 24403452 - 24403232
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    ||||||| ||| |||||||||  | |||||||||||||| || | |||||  ||| ||| ||| || ||||||||||||  || ||||||||||||||      
T  24403452 aaaagattaaatggttaaaattgaaaaaattaataaggtttatggtggactatctataatgttagttcaccatagacat--ttagggttaaagttaacaa 24403355  T
Q  421 tcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
     |||| ||||| |||  | |||||||  ||  |||||||||||||||||  ||||||||| | |||||||| |||||||| ||||||||| ||   ||||    
T  24403354 acatggatttacttgacaaacggaggtgaacttgagggaccaaaacataaattttattaattatgagaccataatgaaaacttgaaattaattagtggac 24403255  T
Q  520 cattggatcaaataagccttaaa 542  Q
    || | || |||||||||||||||    
T  24403254 caatagaccaaataagccttaaa 24403232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 325 - 537
Target Start/End: Complemental strand, 53420527 - 53420317
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||||||| ||| |||| || ||  ||||||||||||| | |||| |||| |||| |||||||||||||||||||  ||  ||||||| ||||  | |     
T  53420527 agatcaaacagtttaaattaaaaagtttaataaggtctatggtggatcacttttaaagttggtccaccatagacat--ttgtggttaaacttaatagact 53420430  T
Q  424 tg--atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
     |  ||||||||| || |||||| ||||  |||||||||||||| || |||||||||| |||  ||||||||||||||| |||||||| ||  |||||||    
T  53420429 agggatttatttgataaacggagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaatatgaaattagttaggggacca 53420330  T
Q  522 ttggatcaaataagcc 537  Q
       |||||||||||||    
T  53420329 ---gatcaaataagcc 53420317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 371 - 536
Target Start/End: Original strand, 34819237 - 34819401
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    |||||||||||||| ||||| |||||||||||||||| ||||| ||||| |  | || | |||||| | || ||| ||||  ||| ||||  |||| ||     
T  34819237 cactcttaaggttgatccactatagacatcatttggggttaaacttaacagcaaggact-atttggcaaacagagaaaaag-tgaaggacttaaacgtac 34819334  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagc 536  Q
    |||||||||| |||  || ||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  34819335 gttttattaattgtaggatcaaaatgaaaacttgaaattatttgagggactaatggatcaaataagc 34819401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 464
Target Start/End: Complemental strand, 10731098 - 10730956
Alignment:
Q  321 caaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaacc 419  Q
    ||||||||| || | ||||||| ||||||||||||||||| || ||| ||| ||| ||||||||||| ||||||||||||  ||   ||||||||||||     
T  10731098 caaaagatcgaatgattaaaattaacaaaattaataaggtatatgatagaccacttttaaggttggttcaccatagacat--ttgaagttaaagttaaca 10731001  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaa 464  Q
    |||  ||||||||||| | |||||| ||||  ||| |||||||||    
T  10731000 gtcgggatttatttggcaaacggagaaaaaagtgaaggaccaaaa 10730956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 40364429 - 40364316
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||| |||| |||||||||  |||| ||  ||||||||| | |  |||||||||||||| ||||||||||||  || ||||||     
T  40364429 gatttatttggcaaacggagaaaaaaatgagggacttaaacgtacattttattaattttaggaccaaaatgaaaacttgaaattatttagggaaccatta 40364330  T
Q  525 gatcaaataagcct 538  Q
    ||||||||||||||    
T  40364329 gatcaaataagcct 40364316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 325 - 538
Target Start/End: Complemental strand, 41263847 - 41263635
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| ||||||||||||||||||||  || || |||| ||||||||| ||||||||||| ||  || | ||||||||||||  |      
T  41263847 agatcgaatggttaaaattaacaaaattaataaggtctagaatagaccacttttaaggttgatccaccatagatat--ttagagttaaagttaacacttg 41263750  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
     |||||| |||  | |||||| |||| |||| |||||||||      ||||| |||||||| ||||||||||||||| ||||||||  | ||||||||      
T  41263749 ggatttaattgacaaacggagaaaaagatgacggaccaaaatgccatttttaataaatgtgggaccaaaatgaaaatatgaaattaaataagggaccaaa 41263650  T
Q  524 ggatcaaataagcct 538  Q
     |||| |||||||||    
T  41263649 cgatctaataagcct 41263635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 287 - 509
Target Start/End: Original strand, 41264521 - 41264743
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    ||||| ||| |||||||||| |  |||||| ||| |||| ||||||||||  |||| || | |||||||| | |||| | || || |||||||| | ||     
T  41264521 tagacctgcttaattcaatggttctctttttaaaaaaaa-atcaaacggtcgaaattaaaataattaataggatctatggtgtaccactcttaaagatga 41264619  T
Q  386 tccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtga 485  Q
    ||||||||| |||||||||   ||||| ||||| ||   ||||||||||| | |||||| ||||  ||||||| ||||||     |||||||||||||||    
T  41264620 tccaccataaacatcatttttattaaacttaacggttgagatttatttggcaaacggagaaaaaggtgagggatcaaaacgccatttttattaaatgtga 41264719  T
Q  486 gaccaaaatgaaaatttgaaatta 509  Q
    ||||||||||||||  ||||||||    
T  41264720 gaccaaaatgaaaacatgaaatta 41264743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 442 - 532
Target Start/End: Complemental strand, 18442345 - 18442255
Alignment:
Q  442 gaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaat 532  Q
    |||||||| |||| |||| ||||| |  |||||||||| |||| |||||||||||||| ||||||||||||   |||||| ||||||||||    
T  18442345 gaggaaaaaatgatggactaaaacgtgggttttattaattgtgggaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaat 18442255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 442 - 532
Target Start/End: Complemental strand, 19487419 - 19487329
Alignment:
Q  442 gaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaat 532  Q
    |||||||| |||| |||| ||||| |  |||||||||| |||| |||||||||||||| ||||||||||||   |||||| ||||||||||    
T  19487419 gaggaaaaaatgatggactaaaacgtgggttttattaattgtgggaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaat 19487329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 399
Target Start/End: Complemental strand, 7270546 - 7270458
Alignment:
Q  312 cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacat 399  Q
    |||||||||||||||||||||| |||||| | || ||| |||||||| |||| | | || |||||||||||||||||||| | ||||||    
T  7270546 cttttaaaacaaaagatcaaacagttaaagtcaaaaaagttaataagatctatggtagaccactcttaaggttggtccactacagacat 7270458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 534
Target Start/End: Original strand, 23443461 - 23443572
Alignment:
Q  423 atgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccat 522  Q
    ||||||||||||| | || || ||||| |||| ||||  |||  || |||||||||| | || |||||||||||||| || |||||| || ||||| |||    
T  23443461 atgatttatttggcaaacagaagaaaagatgaaggacttaaaggtacgttttattaattttgggaccaaaatgaaaagttaaaattaattaagggatcat 23443560  T
Q  523 tggatcaaataa 534  Q
    ||||||||||||    
T  23443561 tggatcaaataa 23443572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 371 - 541
Target Start/End: Original strand, 53614225 - 53614395
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcattt-gggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    ||||||||||| || |||||||||||||| |||| |||||||| |||| || |  ||||||||||| | |  ||||||||| |||||||| |||||        
T  53614225 cactcttaaggatgatccaccatagacattatttggggttaaacttaa-cgcctggatttatttggcaaatagaggaaaatgtgagggactaaaacgcca 53614323  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagccttaa 541  Q
    |||||||||| |||| ||||||||| ||||   |||||||  | ||||||||   |||| ||||||||||||    
T  53614324 gttttattaattgtgggaccaaaataaaaacaagaaattaaataagggaccaaacgatctaataagccttaa 53614395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 538
Target Start/End: Complemental strand, 12105353 - 12105287
Alignment:
Q  472 tttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    |||||||| |||| | |||| ||||||| |||||||||||||||| ||||||| || ||||||||||    
T  12105353 tttattaattgtggggccaatatgaaaacttgaaattatttgaggaaccattgaattaaataagcct 12105287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 19988429 - 19988474
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  19988429 cacacgagtaaattactcaaatgcc-cctcggcagttaactgccgaa 19988474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 50998783 - 50998738
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  50998783 cacacgagtaaattactcaaatgcc-cctcggcagttaactgccgaa 50998738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 648 - 689
Target Start/End: Original strand, 18745948 - 18745989
Alignment:
Q  648 cggcagttaactgccgaaattcaatttaatccatcggcactt 689  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  18745948 cggcagttaactgccgaaattcaatttcatccatcagcactt 18745989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 21074148 - 21074261
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttgg 385  Q
    ||||||||| | |||||||| ||||||||   || |||| |||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| |||||    
T  21074148 tagacatgcgtgattcaatggtcatctttcttaaaaaaatatcaaagggttaaaattgaaaaaattaataaggtctatggtggactatctataatgttgg 21074247  T
Q  386 tccaccatagacat 399  Q
    ||||||||| ||||    
T  21074248 tccaccatatacat 21074261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 649 - 686
Target Start/End: Original strand, 40871179 - 40871216
Alignment:
Q  649 ggcagttaactgccgaaattcaatttaatccatcggca 686  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  40871179 ggcagttaactgccgaaattcaattaaatccatcggca 40871216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 512
Target Start/End: Original strand, 8796354 - 8796406
Alignment:
Q  460 caaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattattt 512  Q
    ||||||||  |||||||||| |||||||| ||||| |||||||||||||||||    
T  8796354 caaaacatgagttttattaattgtgagactaaaataaaaatttgaaattattt 8796406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 40892379 - 40892319
Alignment:
Q  312 cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggaca 372  Q
    ||||||||| | |||||||||| |||||||| || ||| |||||||| |||||||||||||    
T  40892379 cttttaaaatacaagatcaaacagttaaaattaaaaaatttaataagatctacgatggaca 40892319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 665
Target Start/End: Original strand, 4330769 - 4330807
Alignment:
Q  626 gtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  4330769 gtaaattactcaaatgc-tcctcggcagttaactgccgaa 4330807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 668
Target Start/End: Complemental strand, 7942102 - 7942060
Alignment:
Q  625 agtaaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    |||||||||||||||| | |||||||||||||||||||||||||    
T  7942102 agtaaattactcaaatac-tcctcggcagttaactgccgaaatt 7942060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 540
Target Start/End: Original strand, 53421767 - 53421882
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | || ||| ||||  |||||||||||||| || |||||||||| |||  ||| ||||||||||  | |||||| ||  || || ||||    
T  53421767 gatttatttggcaaacagagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggactaaaatgaaaacgtaaaattaattagggaacaattg 53421866  T
Q  525 gatcaaataagcctta 540  Q
     |||||||||||||||    
T  53421867 aatcaaataagcctta 53421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 524
Target Start/End: Original strand, 10340028 - 10340074
Alignment:
Q  478 aaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    |||| ||||||||||||||||| | ||||||| ||||||||||||||    
T  10340028 aaatatgagaccaaaatgaaaaatggaaattagttgagggaccattg 10340074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 11095187 - 11095142
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  11095187 cacacgagtaaattactcaaatgcc-cctcggcagttagctgccgaa 11095142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 16851096 - 16851141
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  16851096 cacacgagtaatttactcaaatgcc-cctcggcagttaactgccgaa 16851141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 26245305 - 26245350
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||    
T  26245305 cacacgagtaaattactcaaatacc-cctcggcagttaactgccgaa 26245350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 665
Target Start/End: Complemental strand, 24703517 - 24703473
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||    
T  24703517 acacgagtaaattactcaaatgcc-cctcggcagttaactaccgaa 24703473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 27841617 - 27841710
Alignment:
Q  327 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaacc 419  Q
    ||||||| |||||||| || | ||||| || | |||| | ||||| ||||||||||||||||||||||| |||| |||| | ||||| ||||||    
T  27841617 atcaaacagttaaaattaaaataattattaggatctatggtggaccactcttaaggttggtccaccataaacataatttagattaaacttaacc 27841710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 534
Target Start/End: Complemental strand, 41544772 - 41544663
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | || ||||||||  ||||||||  |||| || ||| |||||| | |  |||||||||||||| |||||||||||| | |||||| ||    
T  41544772 gatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttatattaattataggaccaaaatgaaaacttgaaattatttaatggaccaatg 41544673  T
Q  525 gatcaaataa 534  Q
     ||| |||||    
T  41544672 aatctaataa 41544663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 287 - 536
Target Start/End: Original strand, 125098 - 125350
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaatt-aataaggtctacgatggac-actcttaaggttg 384  Q
    |||||| ||||||| ||||| ||||||||| ||| ||  ||||||| |||| |||| || |||||| ||||||||||| | ||||| ||| |||||||||    
T  125098 tagacacgcataatccaatggtcatctttttaaaaaactgatcaaagggtttaaattaaaaaaatttaataaggtctatggtggaccacttttaaggttg 125197  T
Q  385 gtccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgt 483  Q
    ||||| |||| |||||||||||| ||||| |||||||| | ||||||||||| | |||||||||||  |||||||||||||  || |||||||||| |||    
T  125198 gtccatcatatacatcatttggggttaaacttaaccgttaggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgt 125297  T
Q  484 gagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagc 536  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  125298 gggaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagc 125350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 287 - 537
Target Start/End: Complemental strand, 124215 - 123967
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    |||||||||||||| | ||| | ||||||| ||| || |||||||||| || |||| |||||  |||||| | |||| | ||||| ||||||||||||||    
T  124215 tagacatgcataatcctatggttatctttttaaaaaatagatcaaacgatttaaattaacaat-ttaatacgatctatggtggaccactcttaaggttgg 124117  T
Q  386 tccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtga 485  Q
    ||||||||||| ||  || |||||||| |||||||| | ||||||||||| | || ||||||||  |||||||||||||  || |||||||||| ||||     
T  124116 tccaccatagatat--ttggggttaaacttaaccgtaaggatttatttggcaaacagaggaaaaagtgagggaccaaaatgtacgttttattaattgtgg 124019  T
Q  486 gaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  124018 gaccaaaatgaaaacttgaaattatttgaaggaccattggatcaaataagcc 123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 3e-59; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 287 - 537
Target Start/End: Complemental strand, 1794661 - 1794409
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    |||||| ||||||||||||| ||||||||| ||| ||  |||||||||||| |||| || ||| ||||||||||||| | ||||| ||||||||||||||    
T  1794661 tagacacgcataattcaatggtcatctttttaaaaaattgatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttgg 1794562  T
Q  386 tccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtg 484  Q
    ||||||||| |||||||||||| ||||| |||||||| | ||||||||||  | || ||||||||  ||||||| |||||  ||| ||||||||| ||||    
T  1794561 tccaccatatacatcatttgggattaaacttaaccgttaggatttatttgacaaacagaggaaaaagtgagggatcaaaaggtatattttattaattgtg 1794462  T
Q  485 agaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    ||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  1794461 agatcaaaatgaaaacttgaaattatttgagggaccattgaatcaaataagcc 1794409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 322 - 538
Target Start/End: Complemental strand, 1587395 - 1587179
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgg-acactcttaaggttggtccaccatagacatcatttgggtt-aaagttaacc 419  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||| ||||| |||| ||||||| || ||||||||  || | ||| ||||||||||    
T  1587395 aaaagatcaaacggttaagattaacaaaattaataaggtatacgatggaacacttttaaagttggtctactatagacat--ttagagttaaaagttaacc 1587298  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
     ||  ||||||||||| | |||||||||||  |||||||||||||  || |||||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  1587297 atcgggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagactaaaatgaaaatttaaaattatttgagggac 1587198  T
Q  520 cattggatcaaataagcct 538  Q
    | |||||||||||||||||    
T  1587197 cgttggatcaaataagcct 1587179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 310 - 537
Target Start/End: Complemental strand, 52240104 - 52239875
Alignment:
Q  310 atcttttaa-aacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttggg 407  Q
    ||||||||| || |||| ||||||||||| |||| || || ||||||| | |||| | ||||| ||||||||||||||||||||||||||||||||||||    
T  52240104 atcttttaataaaaaaaaatcaaacggtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccaccatagacatcatttggg 52240005  T
Q  408 ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaat 507  Q
    |||||||||||| |    |||||||||| | |||||| ||||  ||| | |||||||| || |||||||||| |||| || |||||| ||||||||||||    
T  52240004 ttaaagttaacccttggaatttatttggcaaacggagaaaaacctgaagaaccaaaacgtacgttttattaattgtgggatcaaaataaaaatttgaaat 52239905  T
Q  508 tatttgagggaccattggatcaaataagcc 537  Q
    |||||||||||||||| |||||||||||||    
T  52239904 tatttgagggaccattagatcaaataagcc 52239875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 322 - 538
Target Start/End: Complemental strand, 6348367 - 6348152
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    ||||||||||| ||||||||| |  || |||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||  ||||||| ||||||     
T  6348367 aaaagatcaaagggttaaaattagaaatattaataaggtctacggtggaccactcttaaggttggtccaccatagacat--ttgaggttaaacttaacca 6348270  T
Q  421 tcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacc 520  Q
    |||  |||||||||  | || ||||||||  ||||| |||||||  || |||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  6348269 tcagaatttatttgacaaacagaggaaaaagtgaggaaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacc 6348170  T
Q  521 attggatcaaataagcct 538  Q
    ||| ||||||||||||||    
T  6348169 atttgatcaaataagcct 6348152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 302 - 534
Target Start/End: Original strand, 27850819 - 27851047
Alignment:
Q  302 caatgatcatcttttaaaacaaaaga-tcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacat 399  Q
    |||||||| || ||||||| |||||| |||||||||| |||| || | |||||||| | |||| | ||||| ||| ||||||||||||||||||||||||    
T  27850819 caatgatcctcctttaaaaaaaaagaatcaaacggtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacat 27850918  T
Q  400 catttg-ggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaa 498  Q
    |||||| ||||||| ||||| ||   |||||||       |||||||||||  ||||||||||||| ||| |||||||||| |||| |||||||||||||    
T  27850919 catttgaggttaaacttaactgttgggatttat-------acggaggaaaaattgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaa 27851011  T
Q  499 atttgaaattatttgagggaccattggatcaaataa 534  Q
    | ||||||||||||||||||||||||||||||||||    
T  27851012 acttgaaattatttgagggaccattggatcaaataa 27851047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 347 - 537
Target Start/End: Original strand, 393566 - 393756
Alignment:
Q  347 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatg-atttatttggtatacggag 444  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||  || |  ||||||||||| |||  | |||||||||| | ||||||    
T  393566 aaaattaataaggtctacgatggaccacttttaaggttggtccactataaacat--ttagaattaaagttaacagtccgggatttatttggcaaacggag 393663  T
Q  445 gaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
     ||||  ||||||||||||| |||  ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  393664 aaaaaagtgagggaccaaaagatactttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccgttggatcaaataagcc 393756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 322 - 540
Target Start/End: Original strand, 2312383 - 2312603
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttggg-ttaaagttaacc 419  Q
    |||| ||||||| ||| |||| || | |||||||| | |||| | ||||| ||| ||||| |||||||||||||||||||||||||| ||||| |||||     
T  2312383 aaaaaatcaaacagtttaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacg 2312482  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    |||||||||||||||| | |||||||||||  ||||||||  |||| || |||||||||| |||| ||| |||||| ||| |||||||||| | ||||||    
T  2312483 gtcatgatttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggactaaaatggaaacttgaaattatctaagggac 2312582  T
Q  520 cattggatcaaataagcctta 540  Q
    || ||||||||||||||||||    
T  2312583 caatggatcaaataagcctta 2312603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 536
Target Start/End: Complemental strand, 1829966 - 1829752
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaa-gttaacc 419  Q
    |||| |||||| |||||| || || ||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||  || | |||||| ||||||     
T  1829966 aaaaaatcaaatggttaagattaataaaattaataaggtctacgatggaccacttttaaagttggtccacgatagacat--ttagagttaaaagttaaca 1829869  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    |||   |||||||||  | ||| |||||||  |||||||| |||| ||| |||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  1829868 gtcggaatttatttgacaaacgtaggaaaaagtgagggactaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggac 1829769  T
Q  520 cattggatcaaataagc 536  Q
    | |||||||||||||||    
T  1829768 cgttggatcaaataagc 1829752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 371 - 533
Target Start/End: Original strand, 6349504 - 6349667
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    |||||||||||||| ||||||||| |||||||||||| ||||| |||||  ||  ||| ||||||||| ||||| |||||  |||||||||||||  ||     
T  6349504 cactcttaaggttgatccaccatatacatcatttggggttaaacttaacgttcgggatctatttggtaaacggaagaaaaggtgagggaccaaaaggtac 6349603  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaata 533  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  6349604 gttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattgaatcaaata 6349667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 349 - 538
Target Start/End: Complemental strand, 11968698 - 11968508
Alignment:
Q  349 aattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaa 447  Q
    |||||||| | |||| ||||||| |||||||||||||||||| ||||||||| || || ||||||||| || | |   ||||||||   | |||||| ||    
T  11968698 aattaataggatctatgatggaccactcttaaggttggtccatcatagacataatctgagttaaagttgacagccggaatttattttacaaacggagcaa 11968599  T
Q  448 aatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    ||| |||||||||||||  ||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||  ||||||||||||||    
T  11968598 aatctgagggaccaaaaagtatgttttattaattgtgagaccaaaatgaaaacttgaaattatttgaggaaccataagatcaaataagcct 11968508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 331 - 535
Target Start/End: Original strand, 42810115 - 42810319
Alignment:
Q  331 aacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgattt 429  Q
    ||||||| |||| || ||| ||||||||||||| | ||||| ||||||||| ||||| ||||||||||||| |  |||||||| |||||    | |||||    
T  42810115 aacggtttaaattaaaaaatttaataaggtctatggtggactactcttaagattggttcaccatagacatc-tgggggttaaacttaacaccaaggattt 42810213  T
Q  430 atttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatca 529  Q
    |||||| | |||||||||||| ||||||||  |||  || |||||||||| |||| |||||||||||||| |||||||||||| |||||| |||||||||    
T  42810214 atttggcaaacggaggaaaatgtgagggacttaaaagtacgttttattaattgtgggaccaaaatgaaaagttgaaattatttaagggactattggatca 42810313  T
Q  530 aataag 535  Q
    ||||||    
T  42810314 aataag 42810319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 426 - 538
Target Start/End: Complemental strand, 24426448 - 24426336
Alignment:
Q  426 atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattgg 525  Q
    |||| ||||| | |||||||||||  |||||||||||||  || |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  24426448 atttttttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccattgg 24426349  T
Q  526 atcaaataagcct 538  Q
    |||||||||||||    
T  24426348 atcaaataagcct 24426336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 376 - 538
Target Start/End: Original strand, 1588045 - 1588208
Alignment:
Q  376 ttaaggttggtccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgtttt 474  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||| ||||| |||||||||||| |||||||||||  |||||||   |||| ||  ||||    
T  1588045 ttaaggttggtctaccatagacatcatttggggttaaacttaacagtcataatttatttggtaaacggaggaaaaagtgagggatttaaacgtacatttt 1588144  T
Q  475 attaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    ||||| |||| ||| |||||||||| || ||||||||||||||||||   ||||||||||||||    
T  1588145 attaattgtgggactaaaatgaaaacttaaaattatttgagggaccaaaagatcaaataagcct 1588208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 325 - 534
Target Start/End: Complemental strand, 52963778 - 52963570
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||  |||||| |||  |||||||| ||||||| ||| |||||| |||||||||||||||||  || | |||||||||||| |||     
T  52963778 agatctaaaggttaaaactaacaaatttatgaaggtctatgatggaccacttttaaggctggtccaccatagacat--ttggagttaaagttaacagtcg 52963681  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
     ||||||||||  | |||||| ||||  ||||||||||||||||| | |||||||| ||||||||||||||||||| ||||||||||||   |||||| |    
T  52963680 agatttatttgacaaacggagaaaaacttgagggaccaaaacatacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 52963581  T
Q  524 ggatcaaataa 534  Q
     ||||||||||    
T  52963580 tgatcaaataa 52963570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 325 - 538
Target Start/End: Complemental strand, 40792958 - 40792748
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| ||||| |||||| || |||||||||||||||||| || ||| ||| ||||||||||||||| ||||||||  ||   ||||||||||||  ||     
T  40792958 agatcgaacggataaaattaagaaaattaataaggtctaccatagaccacttttaaggttggtccactatagacat--ttaaagttaaagttaac--tcg 40792863  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
     ||||||||||| | |||||| ||||| |||||||||||||  ||||||||||||| |||| |||||||||||||| || |||||| ||   ||||||||    
T  40792862 ggatttatttggcaaacggagaaaaatctgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggaccatt 40792763  T
Q  524 ggatcaaataagcct 538  Q
      |||||||||||||    
T  40792762 aaatcaaataagcct 40792748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 537
Target Start/End: Complemental strand, 390346 - 390215
Alignment:
Q  406 ggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaa 505  Q
    ||||||| ||||| |||| ||||||||||| | ||||||||| | |||||||||||||| ||| |||||||||| |||| |||||||||||||| |||||    
T  390346 ggttaaacttaacagtcaggatttatttggcaaacggaggaagaaatgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaa 390247  T
Q  506 attatttgagggaccattggatcaaataagcc 537  Q
    |||||||  ||||||| || ||||||||||||    
T  390246 attatttaggggaccaatgaatcaaataagcc 390215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 407 - 538
Target Start/End: Complemental strand, 2311051 - 2310920
Alignment:
Q  407 gttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaa 506  Q
    |||||||||||| || | ||||||||||| |  ||||||||||| |||||||||||||| || |||||||||| |||| |||||||||||||| ||||||    
T  2311051 gttaaagttaactgttaggatttatttggcaatcggaggaaaatctgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaa 2310952  T
Q  507 ttatttgagggaccattggatcaaataagcct 538  Q
    ||| ||   |||||||||||||||||||||||    
T  2310951 ttaattagaggaccattggatcaaataagcct 2310920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 408 - 539
Target Start/End: Complemental strand, 42871222 - 42871091
Alignment:
Q  408 ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaat 507  Q
    ||||| ||||| |||| ||||||||||| | |||||||||||  |||||||||||||| || |||||||||| |||| || |||||||||||||||||||    
T  42871222 ttaaacttaacagtcaggatttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaatttgaaat 42871123  T
Q  508 tatttgagggaccattggatcaaataagcctt 539  Q
    || |   |||||||||||||||||||||||||    
T  42871122 taatcaggggaccattggatcaaataagcctt 42871091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 381 - 537
Target Start/End: Complemental strand, 1188996 - 1188841
Alignment:
Q  381 gttggtccaccatagacatcatttgggttaaa-gttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaa 479  Q
    |||||| ||||||||||||  || |||||||| ||||||  ||  ||||||||||| | |||||||||||  |||||||||||||  || ||||||||||    
T  1188996 gttggttcaccatagacat--ttagggttaaaagttaacgttcgggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaa 1188899  T
Q  480 atgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
     |||| ||||||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  1188898 ttgtgggaccaaaataaaaacttgaaattatttgagggactattggatcaaataagcc 1188841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 287 - 539
Target Start/End: Original strand, 15449942 - 15450195
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    ||||||||||| ||  || ||||||||||||| | |||||| ||||| ||| |||| || || ||||||| | |||| | ||||| ||||||||||||||    
T  15449942 tagacatgcatgatctaacgatcatcttttaataaaaaagagcaaacagtttaaattaaaaatattaataggatctatggtggaccactcttaaggttgg 15450041  T
Q  386 tccaccatagacatcatttgg-gttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtg 484  Q
    ||||| ||||||| ||||||| |||||| |||||||| | ||||||||||| | |||||||||||  | || |||  |||| || |||||||||| |  |    
T  15450042 tccacgatagacaacatttggagttaaacttaaccgt-aagatttatttggcaaacggaggaaaaggtaagcgacttaaacgtacgttttattaactaag 15450140  T
Q  485 agaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctt 539  Q
     || || ||||||||  ||||||||||| |||||||| || ||||||||||||||    
T  15450141 ggatcataatgaaaacctgaaattatttaagggaccaatgaatcaaataagcctt 15450195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 322 - 509
Target Start/End: Complemental strand, 7707803 - 7707614
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgg-gttaaagttaacc 419  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| |||||||||||||||| |||| ||||||||||||| ||||||| |||||    
T  7707803 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtctaccaaagacatcatttggtgttaaagctaacc 7707704  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    |||| ||||||||||| | || ||||||||| ||| |||| ||||| |   ||||||||| |||| ||||||||||||||  ||||||||    
T  7707703 gtcaggatttatttggcaaacagaggaaaatgtgatggactaaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaatta 7707614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 408 - 538
Target Start/End: Complemental strand, 37882963 - 37882831
Alignment:
Q  408 ttaaagttaaccgtca--tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaa 505  Q
    ||||||||||| ||||  |||||||||||| | |||||||||||  |||||||||||||  || |||||||||| |||| ||| |||||||||| |||||    
T  37882963 ttaaagttaacagtcaaatgatttatttggcaaacggaggaaaaggtgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaa 37882864  T
Q  506 attatttgagggaccattggatcaaataagcct 538  Q
    ||||||||||||||||||  |||||||||||||    
T  37882863 attatttgagggaccattaaatcaaataagcct 37882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 441 - 539
Target Start/End: Original strand, 1831285 - 1831383
Alignment:
Q  441 ggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctt 539  Q
    ||||||||| ||||||||||||||  || |||||||||| |||| ||| |||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  1831285 ggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaatgaaaacttgaaattaattgagggaccattggatcaaataagcctt 1831383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 322 - 537
Target Start/End: Original strand, 44503582 - 44503796
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactctt-aaggttggtccaccatagacatcatttgggttaaa-gttaacc 419  Q
    |||| |||||| |||| |||| ||  |||||| ||||||||||| |||||  |||  || |||||| ||||||||||||  || |||||||| ||||||     
T  44503582 aaaaaatcaaatggtttaaattaagcaaattattaaggtctacggtggaccatctacaatgttggttcaccatagacat--ttagggttaaaagttaacg 44503679  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    |||  ||||||||||| | || ||||||||  |||||||||||||  || |||| ||||| |||||||||||||| |||| |||||||||||||||||||    
T  44503680 gtcgggatttatttggcaaacagaggaaaaagtgagggaccaaaatgtacgttt-attaattgtgagaccaaaataaaaacttgaaattatttgagggac 44503778  T
Q  520 cattggatcaaataagcc 537  Q
     |||| ||||||||||||    
T  44503779 tattgaatcaaataagcc 44503796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 411 - 538
Target Start/End: Complemental strand, 4129117 - 4128990
Alignment:
Q  411 aagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattat 510  Q
    |||||||| |||  ||||||||||| | |||||| ||||  | |||||||||||  ||  ||||||||| |||| |||||||||||||| ||||||||||    
T  4129117 aagttaacggtcgggatttatttggcaaacggagaaaaaagtaagggaccaaaatgtacattttattaattgtgggaccaaaatgaaaacttgaaattat 4129018  T
Q  511 ttgagggaccattggatcaaataagcct 538  Q
    |||||| |||||||||||||||||||||    
T  4129017 ttgaggaaccattggatcaaataagcct 4128990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 322 - 518
Target Start/End: Complemental strand, 53432275 - 53432079
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatg-gacactcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    |||||||||||||||||||||  | |||||||||||||| || | || | ||||||||| |||||| ||||||||||||  || |||||||| |||||||    
T  53432275 aaaagatcaaacggttaaaattgaaaaaattaataaggtgtatggtgagccactcttaaagttggttcaccatagacat--ttggggttaaacttaaccg 53432178  T
Q  421 tcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
    ||| | |||||||||    ||| ||| |||  ||||||||||||||||| |||||||||  | || |||||||||||||| ||||||||| || |||||    
T  53432177 tcagggatttatttgaccaacgaaggcaaacttgagggaccaaaacataagttttattacttatgggaccaaaatgaaaacttgaaattaattaaggga 53432079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 322 - 535
Target Start/End: Complemental strand, 27847889 - 27847678
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  ||| |||  |||| |||||||| ||||  || |||||||| |||||||    
T  27847889 aaaagatcaaagggttaaaattga-aaaattaataaggtctatggtggactatctataatcttggcccaccatatacat--ttggggttaaacttaaccg 27847793  T
Q  421 tcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacc 520  Q
    ||  ||||||||||| | ||||| |||||  | ||||||| ||| |||  ||||||||| |||| ||||||||| |||| |||||||||||||||| |      
T  27847792 tctggatttatttggcaaacggaagaaaaattaagggaccgaaaaatacattttattaattgtgggaccaaaataaaaacttgaaattatttgaggaatt 27847693  T
Q  521 attggatcaaataag 535  Q
    ||| |||||||||||    
T  27847692 attagatcaaataag 27847678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 322 - 518
Target Start/End: Original strand, 53435656 - 53435852
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    |||||||||||||||||||||  | ||||||||| | ||||||| |||| ||||||||||||||||| |||||||||||  ||   |||||| |||||||    
T  53435656 aaaagatcaaacggttaaaatttaaaaaattaatgaagtctacggtggaccactcttaaggttggtctaccatagacat--ttaaagttaaacttaaccg 53435753  T
Q  421 tc-atgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
    || | ||||||||||    ||||||| |||  |||||| |||||||||  |||||||||  | || |||||||||||||| ||||||||| || |||||    
T  53435754 tcaaggatttatttgaccaacggaggtaaacttgaggggccaaaacatgagttttattacttatgggaccaaaatgaaaacttgaaattaattaaggga 53435852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 322 - 537
Target Start/End: Original strand, 53205386 - 53205601
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    ||||||||||| ||||||||| ||||||||| |||| |||||||  ||||  ||| ||| |||| ||||||||||||||  ||  | |||||||||||      
T  53205386 aaaagatcaaagggttaaaattaacaaaattgataaagtctacggcggaccatctataatgttgatccaccatagacat--ttgagattaaagttaacac 53205483  T
Q  421 tcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
     |||| |||||||||| | |||||||||||  |||||||| |||||   | |||| |||| |||| ||| ||||||||||| |||||||||||| |||||    
T  53205484 ccatggatttatttggcaaacggaggaaaaagtgagggactaaaacgcctatttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggac 53205583  T
Q  520 cattggatcaaataagcc 537  Q
     | || ||||||||||||    
T  53205584 taatgaatcaaataagcc 53205601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 405 - 537
Target Start/End: Original strand, 37884263 - 37884395
Alignment:
Q  405 gggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttga 504  Q
    |||||||| ||||| |||  ||||||||||| | |||||||||||  | | |||||||||  ||  ||||||||| | || ||| ||||||||||||| |    
T  37884263 gggttaaacttaacagtctggatttatttggcaaacggaggaaaaagtaaaggaccaaaaggtacattttattaattatgggacaaaaatgaaaatttaa 37884362  T
Q  505 aattatttgagggaccattggatcaaataagcc 537  Q
    |||||||||||||||||||| ||||||||||||    
T  37884363 aattatttgagggaccattgaatcaaataagcc 37884395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 348 - 509
Target Start/End: Original strand, 10168711 - 10168873
Alignment:
Q  348 aaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagttaaccgtcatg-atttatttggtatacggagg 445  Q
    ||||||||||||| |||| |||||  ||| ||| |||||||||||||||||||  |  |||||||||||||| |||||| |||||||||| | |||||||    
T  10168711 aaattaataaggtgtacggtggaccatctataatgttggtccaccatagacatt-tgggggttaaagttaactgtcatggatttatttggcaaacggagg 10168809  T
Q  446 aaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||||| |||||||| |||||     ||||||||| |||| ||||||||||||||  ||||||||    
T  10168810 aaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 10168873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 654 - 725
Target Start/End: Complemental strand, 26933275 - 26933205
Alignment:
Q  654 ttaactgccgaaattcaatttaatccatcggcactttaagtgtcgaggaaattataccttcatattcttcga 725  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  26933275 ttaactgccgaaatccaatttaatccatcggcac-ttaagtgccgaggaaattataccttcattttcttcga 26933205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 334 - 509
Target Start/End: Original strand, 23203869 - 23204043
Alignment:
Q  334 ggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatt 432  Q
    ||||||||| ||||||||||||||||||||| || || |||| ||||||||| ||||||||||| ||  || | |||||||||||   |   |||||| |    
T  23203869 ggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccaccatagatat--ttagagttaaagttaatacttgggatttaat 23203966  T
Q  433 tggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||| | |||||| |||| |||| ||||||||||     |||||||||||||| ||||||||||||||| ||||||||    
T  23203967 tggcaaacggagaaaaagatgacggaccaaaacgccatttttattaaatgtgggaccaaaatgaaaatatgaaatta 23204043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 537
Target Start/End: Complemental strand, 44501628 - 44501516
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | || ||| ||||  ||||||||  |||| || |||||||||| | || ||||| |||||||| ||||||||||||||||||||| ||    
T  44501628 gatttatttggcaaacagagaaaaaagtgagggacttaaacgtacgttttattaattatgggaccagaatgaaaacttgaaattatttgagggaccaatg 44501529  T
Q  525 gatcaaataagcc 537  Q
    | |||||||||||    
T  44501528 gttcaaataagcc 44501516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 425 - 539
Target Start/End: Original strand, 31968398 - 31968512
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | || ||||||||  ||| |||||||||| || |||||||||| |||  |||||||||||||| || |||||| ||  |||||| |||    
T  31968398 gatttatttggcaaacagaggaaaaagtgaaggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaaattaaaattaattaggggaccgttg 31968497  T
Q  525 gatcaaataagcctt 539  Q
    |||| ||||||||||    
T  31968498 gatctaataagcctt 31968512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 337 - 509
Target Start/End: Original strand, 52241075 - 52241245
Alignment:
Q  337 taaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttgg 435  Q
    |||||| ||||||| ||||||||||||  |||||| ||| |||||| ||||| |||||||| ||  || | |||||||||||| |||   ||||||||||    
T  52241075 taaaattaacaaaactaataaggtctatcatggaccacttttaaggatggtc-accatagatat--ttggagttaaagttaacggtcggaatttatttgg 52241171  T
Q  436 tatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
     | ||||||||||| |||||| | |||||| || |||||||||| ||||  | |||||||||||  ||||||||    
T  52241172 caaacggaggaaaagatgaggaatcaaaacgtacgttttattaattgtggaatcaaaatgaaaacatgaaatta 52241245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 425 - 537
Target Start/End: Original strand, 1190198 - 1190310
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | || ||| ||||  ||||| ||  |||| || |||||||||| | || |||||||||||||| || |||||||||||||||||| ||    
T  1190198 gatttatttggcaaacagagaaaaaagtgaggtacttaaacgtacgttttattaattatgggaccaaaatgaaaacttaaaattatttgagggaccaatg 1190297  T
Q  525 gatcaaataagcc 537  Q
    | |||||||||||    
T  1190298 gttcaaataagcc 1190310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 2311163 - 2311088
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacat 399  Q
    ||||| || ||||||||| ||||| |||||||||||||||||| || |||| ||||| ||||||||||||||||||    
T  2311163 agatcgaatggttaaaattaacaatattaataaggtctacgatagaccacttttaagattggtccaccatagacat 2311088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 53701559 - 53701647
Alignment:
Q  15 agaggagaagttgttaaggaggaag----agaagaggtgcattattaagagaggatttaaaaatgaagattgagttgtaaagtgggtga 99  Q
    ||||||||||||| |||| ||||||    |||||| ||| |||||| || |||||||||||||||||||||| ||||| ||||||||||    
T  53701559 agaggagaagttggtaagaaggaaggacgagaagatgtgtattatttagggaggatttaaaaatgaagattgggttgtgaagtgggtga 53701647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 396
Target Start/End: Complemental strand, 13165718 - 13165633
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccataga 396  Q
    |||||||||| |||||||||||||||| |||| || | ||||||| | ||||| | ||||| |||||||||||||||||||||||||    
T  13165718 tcttttaaaa-aaaagatcaaacggtttaaattaaaataattaatgaagtctatggtggaccactcttaaggttggtccaccataga 13165633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 507
Target Start/End: Original strand, 33232629 - 33232785
Alignment:
Q  348 aaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggagga 446  Q
    |||||||||||||||||  ||| || ||| ||| |||||||||| ||||||||   ||| |||||||||||| |  | ||||||||||| | ||||||||    
T  33232629 aaattaataaggtctaccgtggcca-tctataatgttggtccacaatagacat---ttgagttaaagttaacggaaaagatttatttggcaaacggagga 33232724  T
Q  447 aaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaat 507  Q
    |||| |||||||| |||||     ||||||||| |||| ||||||||| ||||| ||||||    
T  33232725 aaatgtgagggactaaaacgccatttttattaattgtgggaccaaaataaaaatatgaaat 33232785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 428 - 534
Target Start/End: Original strand, 42872308 - 42872414
Alignment:
Q  428 ttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggat 527  Q
    |||||||| | |||||||||||  |||||||||||||| ||  ||||||||| | || |||||||||||||| | | ||||| ||  |||||||||| ||    
T  42872308 ttatttggcaaacggaggaaaaagtgagggaccaaaacgtacattttattaattatgggaccaaaatgaaaaatggtaattaattaggggaccattgaat 42872407  T
Q  528 caaataa 534  Q
    |||||||    
T  42872408 caaataa 42872414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 287 - 423
Target Start/End: Complemental strand, 44498709 - 44498574
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    ||||||||| ||||  |||| ||||||||||| | |||| |||||||||||  ||| || | |||||||| | |||| | ||||| |||||||||||||     
T  44498709 tagacatgcgtaatctaatggtcatcttttaagaaaaaaaatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttga 44498610  T
Q  386 tccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||||||||||||  ||   |||||||||||||||||    
T  44498609 tccaccatagacat--ttaaagttaaagttaaccgtca 44498574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 407 - 509
Target Start/End: Original strand, 54866619 - 54866720
Alignment:
Q  407 gttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaa 506  Q
    |||||| ||||| |||||||||||||||| | |||||||||||  | |||||| ||||||    ||||||||| |||| ||||||||||||||| |||||    
T  54866619 gttaaacttaacagtcatgatttatttggcaaacggaggaaaacgtaagggactaaaacaccatttttattaattgtg-gaccaaaatgaaaatatgaaa 54866717  T
Q  507 tta 509  Q
    |||    
T  54866718 tta 54866720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 645 - 686
Target Start/End: Original strand, 33409577 - 33409618
Alignment:
Q  645 cctcggcagttaactgccgaaattcaatttaatccatcggca 686  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  33409577 cctcggcagttaactgccgaaattcaattaaatccatcggca 33409618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 645 - 686
Target Start/End: Complemental strand, 33410248 - 33410207
Alignment:
Q  645 cctcggcagttaactgccgaaattcaatttaatccatcggca 686  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  33410248 cctcggcagttaactgccgaaattcaattaaatccatcggca 33410207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 327 - 538
Target Start/End: Original strand, 49343917 - 49344129
Alignment:
Q  327 atcaaacggttaaaatgaacaaaattaataaggtctacgatggaca-ctcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtc--a 423  Q
    ||||||||||||||||  | ||||||||| | ||||| | |||||| || ||||| ||| ||||||||||| |   || |||||||| |||||  ||  |    
T  49343917 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaacttttaagattgatccaccatagatac--ttagggttaaacttaaca-tcgaa 49344013  T
Q  424 tgatttatttggtatacggaggaaaatatga-gggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccat 522  Q
    |||||||||||| | |||||||||||  ||| |||||  ||||  | |||||||||| |||| ||||||||| |||  || |||||||||   |||||||    
T  49344014 tgatttatttggcaaacggaggaaaaagtgaagggacttaaacccacgttttattaattgtgggaccaaaataaaagcttaaaattatttagaggaccat 49344113  T
Q  523 tggatcaaataagcct 538  Q
    ||||||||||||||||    
T  49344114 tggatcaaataagcct 49344129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 537
Target Start/End: Original strand, 4871370 - 4871482
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||  | |||||| ||||  || |||||  ||||||| |||||||||| |||   |||||||||||||  |||||||||||  ||||||| ||    
T  4871370 gatttatttgacaaacggagaaaaacgtgggggacttaaacatacgttttattaattgtagaaccaaaatgaaaacatgaaattattttggggaccaatg 4871469  T
Q  525 gatcaaataagcc 537  Q
    |||||||||||||    
T  4871470 gatcaaataagcc 4871482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 620 - 668
Target Start/End: Complemental strand, 18884606 - 18884559
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  18884606 acacgagtaaattactcaaatgcc-cctcggcagttaactgccgaaatt 18884559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 512
Target Start/End: Original strand, 54485550 - 54485638
Alignment:
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattattt 512  Q
    |||||||||||| | ||||| |||||  ||||||| ||||||  |||||||||||| | || || ||||||||||| ||||||||||||    
T  54485550 tgatttatttggcaaacggatgaaaacttgagggatcaaaacgaatgttttattaattatgggatcaaaatgaaaacttgaaattattt 54485638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 7708704 - 7708767
Alignment:
Q  334 ggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccataga 396  Q
    ||||| ||| |||||||||||||||||||| |||| | |||| |||||||||||||||||||||    
T  7708704 ggttagaattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccataga 7708767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 537
Target Start/End: Original strand, 11438531 - 11438686
Alignment:
Q  381 gttggtccaccatagacatcatttgggttaaagttaaccgtcat-gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaa 479  Q
    ||||||||||| |||||||  || |||||||| ||||  ||||  ||||||||| | | | |||||||||  ||||||||||||||   |||||||||||    
T  11438531 gttggtccaccgtagacat--ttggggttaaacttaaaagtcagagatttatttagcaaatggaggaaaaagtgagggaccaaaacgagtgttttattaa 11438628  T
Q  480 atgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
     | |||||||||||| |||| || ||||||| |  ||||| | |||| ||||||||||    
T  11438629 ttatgagaccaaaataaaaacttcaaattatataggggactaatggaacaaataagcc 11438686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 14201630 - 14201585
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  14201630 cacacgagtaaattactcaaatgcc-cctcggcagttaactgccgaa 14201585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 21022991 - 21022946
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  21022991 cacacgagtaaattactcaaatgcc-cctcggcagttaactgccgaa 21022946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 371 - 509
Target Start/End: Complemental strand, 23202010 - 23201872
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatg 470  Q
    ||||||||| | || ||||||||| |||||||||   ||||| ||||| ||   ||||||||||| | |||||||||||  |||||||||||||          
T  23202010 cactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgggatttatttggcaaacggaggaaaaggtgagggaccaaaatgccat 23201911  T
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    |||||||||||||| ||||||||| ||||  ||||||||    
T  23201910 ttttattaaatgtgggaccaaaataaaaacatgaaatta 23201872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 418
Target Start/End: Complemental strand, 56085560 - 56085465
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaac 418  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| |||||||||||| |||||||||||||||  || ||||||||||||||    
T  56085560 aaaaaatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttagtccaccatagacat--ttggggttaaagttaac 56085465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 619 - 663
Target Start/End: Complemental strand, 47153472 - 47153427
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcc-tcggcagttaactgccg 663  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||    
T  47153472 cacaccaataaattactcaaatgcctccatcggcagttaactgccg 47153427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 7053425 - 7053321
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    ||||||||||| ||  || |||| |||||||| | ||||||||||||| || |||| || |||||||||| | |||| | |||| |||||||||| ||||    
T  7053425 tagacatgcatgatctaacgatcctcttttaataaaaaagatcaaacgatttaaattaaaaaaattaataggatctatggtggatcactcttaagattgg 7053326  T
Q  386 tccac 390  Q
    |||||    
T  7053325 tccac 7053321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 399
Target Start/End: Complemental strand, 4714233 - 4714155
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacat 399  Q
    ||||||||||| |||||||||  | || |||||| | ||||| | ||||| ||||||||||||| ||||||||||||||    
T  4714233 aaaagatcaaatggttaaaatttaaaatattaatgaagtctatggtggaccactcttaaggttgatccaccatagacat 4714155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 399
Target Start/End: Original strand, 13533165 - 13533242
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacat 399  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| |||||||||||||||||||    
T  13533165 aaaagatcaaatggttaaaattga-aaaattaataaggtctatggtggactatctataatgttggtccaccatagacat 13533242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 31242185 - 31242230
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||||    
T  31242185 cacacgagtaaattactcaaatgcc-cttcggcagttaactgccgaa 31242230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 535
Target Start/End: Complemental strand, 31965945 - 31965835
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||||||||  |||||||||||||  ||  |||| |||| |||  ||||| ||| |||| ||||||||| ||  |||| ||||     
T  31965945 gatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacattttcttaattgtaggaccagaataaaaacttgaaattaattaggggatcatta 31965846  T
Q  525 gatcaaataag 535  Q
    |||||||||||    
T  31965845 gatcaaataag 31965835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 40833713 - 40833668
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||    
T  40833713 cacacgagtaaattactcaaatacc-cctcggcagttaactgccgaa 40833668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 651 - 689
Target Start/End: Original strand, 43210439 - 43210477
Alignment:
Q  651 cagttaactgccgaaattcaatttaatccatcggcactt 689  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  43210439 cagttaactgccgaaatccaatttaattcatcggcactt 43210477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 46253456 - 46253501
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||||    
T  46253456 cacacgagtaaattactcaaatgcc-catcggcagttaactgccgaa 46253501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 51037571 - 51037526
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||    
T  51037571 cacacgagtaaattactcaaatgtc-cctcggcagttaactgccgaa 51037526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 10167535 - 10167422
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||  | ||||||||||||||||||||| ||||   |  ||||||||| ||||  |||||||||||||  ||||||||  | ||||||||       
T  10167535 gatttatttgacaaacggaggaaaatatgagggactaaaatgcaatttttattaattgtggtaccaaaatgaaaacatgaaattaaataagggaccaaac 10167436  T
Q  525 gatcaaataagcct 538  Q
    |||| |||||||||    
T  10167435 gatctaataagcct 10167422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 665
Target Start/End: Original strand, 20208481 - 20208525
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  20208481 acacgagtaaattactcaaatgtc-cctcggcagttaactgccgaa 20208525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 521
Target Start/End: Original strand, 38698065 - 38698130
Alignment:
Q  456 ggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    ||||||||||||   |||||||| || || |||||||||||||||| |||||||||| | ||||||    
T  38698065 ggaccaaaacatgacttttattagatatgggaccaaaatgaaaattggaaattatttaaaggacca 38698130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 53204471 - 53204378
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
    ||||||||||| | |||||| ||||  ||||| || |||||   ||||||||||| ||||||| |||||||||||  | ||||||||| |||||    
T  53204471 gatttatttggcaaacggagaaaaaattgaggaactaaaacgcctgttttattaattgtgagatcaaaatgaaaacattaaattatttaaggga 53204378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 56000532 - 56000419
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    ||||||| || ||| ||| |||| |||||| || ||||| |||||| ||||||||| || ||| ||| ||||||||||| |||| |||   ||| |||||    
T  56000532 tagacatacacaatccaacgatcctctttttaatcaaaatatcaaatggttaaaattaaaaaacttagtaaggtctacggtggaccacctataatgttgg 56000433  T
Q  386 tccaccatagacat 399  Q
    |||||| |||||||    
T  56000432 tccaccttagacat 56000419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 3e-53; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 371 - 537
Target Start/End: Original strand, 11317320 - 11317486
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatg 470  Q
    ||||||||||||||||| ||||||||||||||||| |||||| ||||| || | ||||||||||  | |||||||||||  ||||||||||||| |||||    
T  11317320 cactcttaaggttggtctaccatagacatcatttgagttaaacttaactgtgaggatttatttgccaaacggaggaaaaattgagggaccaaaatatatg 11317419  T
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11317420 ttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagcc 11317486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 287 - 538
Target Start/End: Original strand, 6030337 - 6030589
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    ||||||||||| ||  || | ||||||||||| | |||||||||||||||| |||| || || ||||||| | |||| | | || |||||||||||||||    
T  6030337 tagacatgcatgatataacgttcatcttttaataaaaaagatcaaacggtttaaattaaaaatattaataggatctatggtagatcactcttaaggttgg 6030436  T
Q  386 tccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtga 485  Q
    |||||| |||||||||||||||||||||||||| ||   ||||||||||| | |  ||||||||||||| ||| |||||| ||  ||| ||||| ||||     
T  6030437 tccaccgtagacatcatttgggttaaagttaactgttgagatttatttggcaaatagaggaaaatatgaaggatcaaaacgtacttttaattaattgtgg 6030536  T
Q  486 gaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    || ||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  6030537 gatcaaaatgaaaacttcaaattatttgagggactattggatcaaataagcct 6030589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 347 - 537
Target Start/End: Original strand, 17460613 - 17460802
Alignment:
Q  347 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggagg 445  Q
    ||||||||||||||||||||| ||| ||| ||||| ||||||||||||||||||  ||   |||||||||||| |||  ||||||||||| | |||||||    
T  17460613 aaaattaataaggtctacgatagaccacttttaagattggtccaccatagacat--ttaaagttaaagttaacggtcgggatttatttgggaaacggagg 17460710  T
Q  446 aaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    ||||| |||||||||||||| || |||||||||| |||| || ||||||||||| ||||||||| ||   ||||||||||||||||||||||    
T  17460711 aaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattaattagaggaccattggatcaaataagcc 17460802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 322 - 543
Target Start/End: Original strand, 28562713 - 28562933
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    ||||||||||| |||||||||    ||| ||||||||||||| | |||||  ||| ||| |||||||||||||| | ||  || || ||||| ||||| |    
T  28562713 aaaagatcaaagggttaaaattggaaaatttaataaggtctatggtggactatctataatgttggtccaccatatatat--ttgggattaaacttaacag 28562810  T
Q  421 tcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacc 520  Q
    ||  ||||||||||  | |||||||||||  |||||||||||||  ||||||||||||| | || |||||||||||||||||||||||||||||||||||    
T  28562811 tctggatttatttgacaaacggaggaaaaagtgagggaccaaaaggtatgttttattaattatgggaccaaaatgaaaatttgaaattatttgagggacc 28562910  T
Q  521 attggatcaaataagccttaaaa 543  Q
    |||| ||||||||||||| ||||    
T  28562911 attgaatcaaataagcctaaaaa 28562933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 385 - 539
Target Start/End: Original strand, 7437727 - 7437881
Alignment:
Q  385 gtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtg 484  Q
    ||||| |||||| || |||||||||||| ||||  || | ||||||||| ||| |||||||||||  ||||||||||||| ||| |||||||||| ||||    
T  7437727 gtccatcatagatattatttgggttaaacttaattgttaggatttattttgtaaacggaggaaaaattgagggaccaaaatatacgttttattaattgtg 7437826  T
Q  485 agaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctt 539  Q
     |||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  7437827 ggaccaaaatgaaaacttgaaattatttgagcaaccattggatcaaataagcctt 7437881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 297 - 545
Target Start/End: Complemental strand, 43033319 - 43033072
Alignment:
Q  297 taattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatag 395  Q
    |||| ||||| || ||||||| || ||| ||||| | |||| |||| || | |||||||| ||| || | ||||| |||||||||||||||| |||||||    
T  43033319 taatccaatggtcctcttttagaagaaatgatcacaaggtttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatag 43033220  T
Q  396 acatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatg 495  Q
    ||||  ||  ||||||| |||||    | ||||||||||| | |||||||||||  |||||||||||||  || |||||||||| |||| ||||||||||    
T  43033219 acat--ttgaggttaaacttaacatcgaggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaatg 43033122  T
Q  496 aaaatttgaaattatttgagggaccattggatcaaataagccttaaaatt 545  Q
    |||| |||||||||||| ||||| |||||||||||||||||||| |||||    
T  43033121 aaaacttgaaattatttaagggatcattggatcaaataagcctttaaatt 43033072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 311 - 539
Target Start/End: Original strand, 42641752 - 42641980
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggtt 409  Q
    |||||||||| |||||||||||| ||| |||| || | |||||||| | |||| | | ||| |||||||||||||| |||||||||||||||||||||||    
T  42641752 tcttttaaaaaaaaagatcaaacagtttaaattaaaataattaataggatctatggtagaccactcttaaggttggcccaccatagacatcatttgggtt 42641851  T
Q  410 aaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
     || ||||  || | ||||||||||| | |||||  ||||  || ||||||||||  |  |||||||||| | || ||||||||| ||||||||||||||    
T  42641852 gaacttaattgtgaggatttatttggcaaacggaaaaaaag-tgggggaccaaaaggtgcgttttattaattatgggaccaaaataaaaatttgaaatta 42641950  T
Q  510 tttgagggaccattggatcaaataagcctt 539  Q
    ||||||||||||||| ||||||||| ||||    
T  42641951 tttgagggaccattgaatcaaataaacctt 42641980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 371 - 537
Target Start/End: Complemental strand, 17459418 - 17459251
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    |||| ||||| || ||||||||||||||||||||||| ||||| ||||  ||||  |||||||||| | |||||||||||  ||||||||  |||| ||     
T  17459418 cacttttaagattcgtccaccatagacatcatttggggttaaacttaaaagtcagaatttatttggcaaacggaggaaaaagtgagggacttaaacgtac 17459319  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    |||||||||| |||| |||||||||||||| |||||||||||| |||||| | |||||||||||||||    
T  17459318 gttttattaattgtgtgaccaaaatgaaaacttgaaattatttaagggactaatggatcaaataagcc 17459251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 325 - 537
Target Start/End: Original strand, 32470482 - 32470693
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||| | | ||||||||  ||||||||||||||  || | |||||| ||||| | |     
T  32470482 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccatttttaaggtttatccaccatagacat--ttggagttaaacttaacagccg 32470579  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
     ||||||||||  | ||||||||||| |||||| ||  |||| || |||||||||| |||| ||||||||| |||| ||||||||||||  ||||| | |    
T  32470580 ggatttatttgacaaacggaggaaaacatgaggaacttaaacgtacgttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaat 32470679  T
Q  524 ggatcaaataagcc 537  Q
    ||||||||||||||    
T  32470680 ggatcaaataagcc 32470693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 371 - 537
Target Start/End: Complemental strand, 11547824 - 11547657
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    ||||| |||||||||||||  |||||||||||||||| ||||| ||||| |||| ||||||||||  | ||| ||||||| |||||||   ||||||| |    
T  11547824 cactcctaaggttggtccatgatagacatcatttggggttaaacttaacagtcaggatttatttgacaaacgaaggaaaaaatgaggggttaaaacatgt 11547725  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    |||||||||| | ||||||||||||||||| |||||||||||| | |||||| |  ||||||||||||    
T  11547724 gttttattaattatgagaccaaaatgaaaacttgaaattatttaaaggaccaataaatcaaataagcc 11547657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 371 - 539
Target Start/End: Complemental strand, 32469313 - 32469144
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat- 469  Q
    ||||||||| |||||||||||||| |||| ||||| |||||| |||||  | | ||||||||||| | |||||||||||  ||| |||||||||  ||      
T  32469313 cactcttaaagttggtccaccatatacataatttgagttaaacttaactataaggatttatttggca-acggaggaaaaagtgaaggaccaaaaggtaca 32469215  T
Q  470 -gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctt 539  Q
     |||||||||| |||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  32469214 cgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggaccattgaatcaaataagcctt 32469144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 347 - 541
Target Start/End: Complemental strand, 11316120 - 11315927
Alignment:
Q  347 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggagg 445  Q
    ||||||||||||||||||| ||||| | | ||||||||| ||||||||||||||  || |  ||||| ||||| | |  ||||||||||| | |||||||    
T  11316120 aaaattaataaggtctacggtggaccatttttaaggttgatccaccatagacat--ttggaattaaacttaacagccgggatttatttggcaaacggagg 11316023  T
Q  446 aaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagccttaa 541  Q
    ||||  ||||||||  |||| || |||||||||| |||| |||||||||||||| ||||||||||||  ||||||| || || |||||||||||||    
T  11316022 aaaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaatgaattaaataagccttaa 11315927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 371 - 534
Target Start/End: Original strand, 43034423 - 43034586
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatg 470  Q
    ||||||||| |||| ||||||||||||||      ||||||| ||||| |  | ||||||||||  | |||||||||||  |||||||||||||  || |    
T  43034423 cactcttaaagttgatccaccatagacatttgagaggttaaacttaacagcgaagatttatttgacaaacggaggaaaaagtgagggaccaaaaggtacg 43034522  T
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataa 534  Q
    ||||||||| |||||||  |||||||||| |||||||||||||||||||||||| |||||||||    
T  43034523 ttttattaattgtgagattaaaatgaaaacttgaaattatttgagggaccattgaatcaaataa 43034586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 325 - 509
Target Start/End: Complemental strand, 1083197 - 1083014
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| ||||||||||||||||||||| || ||| ||| ||||||||| ||||||||||| ||  || | ||||||||||||  |      
T  1083197 agatcgaatggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccaccatagatat--ttagagttaaagttaacacttg 1083100  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
     |||||| |||| | |||||| |||| |||| |||||||||||    |||||||||||||| ||||||||||||||| ||||||||    
T  1083099 ggatttaattggcaaacggagaaaaagatgacggaccaaaacaccatttttattaaatgtgggaccaaaatgaaaatatgaaatta 1083014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 426 - 535
Target Start/End: Complemental strand, 28561477 - 28561368
Alignment:
Q  426 atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattgg 525  Q
    |||||||||  | ||| |||||||  ||||||||||||| ||| |||||||||| ||||||||||||||||||| || ||||||||| |||||||||||     
T  28561477 atttatttgacaaacgtaggaaaaggtgagggaccaaaagatacgttttattaattgtgagaccaaaatgaaaacttaaaattatttaagggaccattga 28561378  T
Q  526 atcaaataag 535  Q
    ||||||||||    
T  28561377 atcaaataag 28561368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 34513421 - 34513534
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    |||||| ||||||| ||||||||||||||| ||| || ||||||||||||| |||| || ||||||||||||||||| | |||| |||||||||||||||    
T  34513421 tagacacgcataatccaatgatcatctttttaaaaaacagatcaaacggtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttgg 34513520  T
Q  386 tccaccatagacat 399  Q
    || |||||| ||||    
T  34513521 tcaaccatatacat 34513534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 327 - 509
Target Start/End: Complemental strand, 29219595 - 29219411
Alignment:
Q  327 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcattt-gggttaaagttaaccgtcat 424  Q
    ||||||||||| |||| || | |||||||| | |||| | ||||| ||| ||||| ||||||||||||||||||||||| |||||||| ||||| ||       
T  29219595 atcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgg 29219496  T
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||||||||||| | |||||||||||  |||||||| |||||     ||||||||| |||| ||||||||||||||  ||||||||    
T  29219495 gatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 29219411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 327 - 509
Target Start/End: Complemental strand, 29332894 - 29332710
Alignment:
Q  327 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcattt-gggttaaagttaaccgtcat 424  Q
    ||||||||||| |||| || | |||||||| | |||| | ||||| ||| ||||| ||||||||||||||||||||||| |||||||| ||||| ||       
T  29332894 atcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgg 29332795  T
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||||||||||| | |||||||||||  |||||||| |||||     ||||||||| |||| ||||||||||||||  ||||||||    
T  29332794 gatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 29332710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 348 - 533
Target Start/End: Complemental strand, 7436652 - 7436469
Alignment:
Q  348 aaattaataaggtctacgatggacactctt-aaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggagga 446  Q
    |||||||||| |||||||||||||  |||  || |||||| ||||||| ||||  || |||||| | ||||| || | ||||||||||  | ||||| ||    
T  7436652 aaattaataaagtctacgatggactatctacaatgttggttcaccatatacat--ttggggttagacttaactgttaggatttatttgacaaacggaaga 7436555  T
Q  447 aaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaata 533  Q
    |||  ||||| |||||||  ||| ||||||||| |||  ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  7436554 aaaattgagg-accaaaaggtatattttattaattgtaggaccaaaataaaaacttgaaattatttgagggaccattggatcaaata 7436469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 322 - 521
Target Start/End: Original strand, 2277372 - 2277571
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactctta-aggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  |||   | |||||||||||||||||||  || ||||||||||||||      
T  2277372 aaaagatcaaagggttaaaattgaaaaaattaataaggtctatggtggactatctaccatgttggtccaccatagacat--ttggggttaaagttaactc 2277469  T
Q  421 tcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
     |||| |||||||||    || ||||  ||  ||||||||||||||||| |||||||||  | || |||||||||||||| | |||||||||||||||||    
T  2277470 ccatggatttatttgaccgactgaggtgaacttgagggaccaaaacataagttttattacttatgggaccaaaatgaaaactggaaattatttgagggac 2277569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 723
Target Start/End: Complemental strand, 41566184 - 41566107
Alignment:
Q  645 cctcggcagttaactgccgaaattcaatttaatccatcggcactttaagtgtcgaggaaattataccttcatattcttc 723  Q
    |||||||| ||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  41566184 cctcggcaattaactgtcgaagtccaatttaatccatcggcac-ttaagtgtcgaggaaattataacttcattttcttc 41566107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 322 - 509
Target Start/End: Original strand, 18616907 - 18617096
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcattt-gggttaaagttaacc 419  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| ||| |||||  |||||||||||||||||||||| |||||||| ||||      
T  18616907 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagactggtccaccatagacatcatttggggttaaacttaata 18617006  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||   ||||||||||| | |||||||||||  |||||||| |||||     ||||||||| |||| ||||||||||||||  ||||||||    
T  18617007 gttgggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 18617096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 645 - 725
Target Start/End: Original strand, 41565372 - 41565451
Alignment:
Q  645 cctcggcagttaactgccgaaattcaatttaatccatcggcactttaagtgtcgaggaaattataccttcatattcttcga 725  Q
    ||||||||||||||||||||| | ||||||||||||||| ||| ||||||| ||||||||| ||| |||||| ||||||||    
T  41565372 cctcggcagttaactgccgaagtccaatttaatccatcgacac-ttaagtgccgaggaaatcataacttcattttcttcga 41565451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 322 - 521
Target Start/End: Complemental strand, 34147350 - 34147150
Alignment:
Q  322 aaaagatcaaacggttaaaat-gaacaaaattaataaggtctacgatggacactctta-aggttggtccaccatagacatcatttgggttaaagttaacc 419  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||| | |||||  |||   | |||||||||||||||||||  || ||||||||||||||     
T  34147350 aaaagatcaaagggttaaaattgaaaaaaattaataaggtctatggtggactatctaccatgttggtccaccatagacat--ttggggttaaagttaaca 34147253  T
Q  420 gtcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
      |||| |||||||||     ||||||  ||  ||||||||||||||||  |||||||||  | || |||||||||||||| |  |||||||||||||||    
T  34147252 cccatggatttatttgactggcggaggtgaacttgagggaccaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttgaggga 34147153  T
Q  519 cca 521  Q
    |||    
T  34147152 cca 34147150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 325 - 499
Target Start/End: Complemental strand, 34464178 - 34464004
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||||||| ||| |||| || |||  |||||||||||| | ||||| |||||||||||||||| || ||||||||  || |||||||| ||||| ||||    
T  34464178 agatcaaacagtttaaattaaaaaatctaataaggtctatggtggaccactcttaaggttggtcaacgatagacat--ttggggttaaacttaacagtca 34464081  T
Q  424 t-gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaa 499  Q
      |||||||||| |  ||||||| |||  ||| ||||||||| || ||||||||||| | | | |||||||||||||    
T  34464080 gagatttatttgattaacggaggcaaacctgatggaccaaaagatttgttttattaattatcaaaccaaaatgaaaa 34464004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 499
Target Start/End: Complemental strand, 34513034 - 34512850
Alignment:
Q  313 ttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaa 411  Q
    |||||||| || | ||||||  ||| |||| || ||| |||||||||| || | ||||| ||||||| ||||| ||||||||| |||| |    ||||||    
T  34513034 ttttaaaaaaacaaatcaaatagtttaaattaaaaaatttaataaggtatatggtggaccactcttatggttgatccaccatatacattaa---ggttaa 34512938  T
Q  412 agttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaa 499  Q
    | ||||| |||||||||||||||    ||||||| |||| ||||||| ||||||||  |||||||||| | || ||||||||||||||    
T  34512937 acttaacagtcatgatttatttgactaacggaggcaaatttgagggatcaaaacatgagttttattaattatgggaccaaaatgaaaa 34512850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 371 - 509
Target Start/End: Original strand, 1085340 - 1085476
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatg 470  Q
    ||||||||| | || ||||||||| |||||||||   ||||| ||||| ||  |||||||||||| | ||||||||||  |||||||||||||||         
T  1085340 cactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgtgatttatttggcaaacggaggaaa--atgagggaccaaaacgccaa 1085437  T
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||||||||||||||  |||||||||||||  ||||||||    
T  1085438 ttttattaaatgtggtaccaaaatgaaaacatgaaatta 1085476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 325 - 422
Target Start/End: Complemental strand, 6028926 - 6028830
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtc 422  Q
    ||||| || ||||||||| |||||||||| |||||||||||||||| |||| |||||  |||||||||||| ||||  || | ||||||||||||||||    
T  6028926 agatcgaatggttaaaattaacaaaattattaaggtctacgatggaccacttttaagactggtccaccatatacat--ttagagttaaagttaaccgtc 6028830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 443 - 534
Target Start/End: Complemental strand, 36010669 - 36010578
Alignment:
Q  443 aggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataa 534  Q
    |||||||  |||||||| |||| ||| ||||||||||  || |||||||||||||||  ||||||||||| |||||| | ||||||||||||    
T  36010669 aggaaaaagtgagggactaaaatatacgttttattaatcgtaagaccaaaatgaaaacatgaaattatttaagggactaatggatcaaataa 36010578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 6028794 - 6028741
Alignment:
Q  486 gaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctt 539  Q
    |||||||||||||||||||||||||||  | ||||| |||||||||||||||||    
T  6028794 gaccaaaatgaaaatttgaaattatttaggagaccaatggatcaaataagcctt 6028741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 508
Target Start/End: Original strand, 6032217 - 6032403
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-ca-ctcttaaggttggtccaccatagacatcatttgggttaaagttaacc 419  Q
    |||||||||||||| |||||| ||  ||||||||||||||||||||||| ||  |||| | ||||||| |||||||||||  ||   ||||||||||||     
T  6032217 aaaagatcaaacggctaaaattaattaaattaataaggtctacgatggatcatgtctt-atgttggtcaaccatagacat--ttgaagttaaagttaacg 6032313  T
Q  420 gtcat-gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatt 508  Q
    ||||| ||||||||||| | || |||||||| ||  ||||| ||||||    ||||||||| ||||  |||||||| ||||  |||||||    
T  6032314 gtcatggatttatttggcaaacagaggaaaaaatacgggactaaaacaccatttttattaattgtggaaccaaaataaaaacatgaaatt 6032403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 29074106 - 29074061
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  29074106 cacacgagtaaattactcaaatgcc-cctcggcagttaactgccgaa 29074061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 620 - 665
Target Start/End: Original strand, 29947738 - 29947782
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  29947738 acacgagtaaattactcaaatgcc-cctcggcagttaactgccgaa 29947782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 347 - 509
Target Start/End: Complemental strand, 18615703 - 18615542
Alignment:
Q  347 aaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggagg 445  Q
    ||||||||||||| |||||||||| | || |||||||| |||||||||| | ||  ||    ||||| ||||| |||  ||||||||||| | |||||||    
T  18615703 aaaattaataaggcctacgatggatcgcttttaaggttcgtccaccataaatat--ttaaaattaaaattaacagtcgggatttatttggcaaacggagg 18615606  T
Q  446 aaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||||| |  ||||| ||||      ||||||||| |||||||||||||||||||| ||||||||    
T  18615605 aaaatgtaggggactaaaaagccatttttattaattgtgagaccaaaatgaaaatatgaaatta 18615542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 668
Target Start/End: Original strand, 33222587 - 33222634
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||||||    
T  33222587 acacgagtaaattactcaaatgc-tcctcggcagttaactaccgaaatt 33222634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 37957030 - 37956963
Alignment:
Q  454 agggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    ||||||||||||||   ||||||||  | || |||||||||||||||||||||||| || ||||||||    
T  37957030 agggaccaaaacatgaattttattacttatgggaccaaaatgaaaatttgaaattaattaagggacca 37956963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 3086006 - 3086051
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||    
T  3086006 cacacgagtaaattactcaaatgt-tcctcggcagttaactgccgaa 3086051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 10424809 - 10424854
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  10424809 cacacgagtaaattactcaaatgcc-cctcagcagttaactgccgaa 10424854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 30803121 - 30803076
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||    
T  30803121 cacacgagtaaattactcaaatgtc-cctcggcagttaactgccgaa 30803076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 36510959 - 36510914
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||    
T  36510959 cacacgagtaaattactcaaatacc-cctcggcagttaactgccgaa 36510914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 668
Target Start/End: Complemental strand, 37322205 - 37322166
Alignment:
Q  627 taaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  37322205 taaattactcaaatgcc--ctcggcagttaactgccgaaatt 37322166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 661
Target Start/End: Complemental strand, 39951253 - 39951212
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgc 661  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  39951253 cacacgagtaaattactcaaatg-ctcctcggcagttaactgc 39951212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 674
Target Start/End: Complemental strand, 4286720 - 4286691
Alignment:
Q  645 cctcggcagttaactgccgaaattcaattt 674  Q
    ||||||||||||||||||||||||||||||    
T  4286720 cctcggcagttaactgccgaaattcaattt 4286691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 523
Target Start/End: Original strand, 23233763 - 23233800
Alignment:
Q  486 gaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  23233763 gaccaaaatgaaaatttgtaattagttgagggaccatt 23233800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 5e-52; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 322 - 545
Target Start/End: Original strand, 32798434 - 32798658
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    |||||||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  32798434 aaaagatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacatcatttgagttaaacttaaccg 32798533  T
Q  421 tcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacc 520  Q
    | | ||||||||||  | |||||| ||||  |||||||| ||||  || |||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  32798534 tgaggatttatttgacaaacggagaaaaaattgagggactaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacc 32798633  T
Q  521 attggatcaaataagccttaaaatt 545  Q
    |||| ||||||||||||| ||||||    
T  32798634 attgcatcaaataagcctaaaaatt 32798658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 287 - 537
Target Start/End: Original strand, 45281056 - 45281306
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    ||||||||||| ||  || | ||||||||||| | |||||||||||||||| |||| || || ||||||| | | || | | ||| ||||||||||||||    
T  45281056 tagacatgcatgatctaacgttcatcttttaataaaaaagatcaaacggtttaaattaaaaatattaataggatttatggtagaccactcttaaggttgg 45281155  T
Q  386 tccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtga 485  Q
    |||||| |||||||||||||| ||||||||||| ||   ||||||||||| | | |||||||||| ||| ||| |||||||||| ||||||||| |||      
T  45281156 tccaccgtagacatcatttggattaaagttaactgttgggatttatttggcaaatggaggaaaatctgaaggatcaaaacatat-ttttattaattgttg 45281254  T
Q  486 gaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  45281255 gaccaaaatgaaaacttgaaattatttgagggactattggatcaaataagcc 45281306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 325 - 539
Target Start/End: Original strand, 44076267 - 44076483
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttggg-ttaaagttaaccgtc 422  Q
    |||||||| |||| |||| || |||||||||||| | || | |||| || | |||| |||| |||||||||||||||||||||| ||||| ||||| ||     
T  44076267 agatcaaatggtttaaattaaaaaaattaataagatttatggtggatcatttttaatgttgttccaccatagacatcatttggggttaaacttaactgta 44076366  T
Q  423 atgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccat 522  Q
      ||||||||||| | |||||||||||  ||||| ||||||| ||| |||||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  44076367 gggatttatttggcaaacggaggaaaaattgaggcaccaaaagatacgttttattaattgtgggaccaaaataaaaatttgaaattatttgagggaccat 44076466  T
Q  523 tggatcaaataagcctt 539  Q
    |||||||||||||||||    
T  44076467 tggatcaaataagcctt 44076483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 306 - 537
Target Start/End: Complemental strand, 4810695 - 4810467
Alignment:
Q  306 gatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcattt 404  Q
    |||| |||||||| | |||||||||||| ||| |||| || || ||||||| | |||| | ||||| ||||||||      |||||||||||||||||||    
T  4810695 gatcctcttttaataaaaaagatcaaacagtttaaattaaaaatattaataggatctatggtggaccactcttaat-----tccaccatagacatcattt 4810601  T
Q  405 ggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttg 503  Q
    ||| |||||||||||||||  ||||||||||| | |||||| ||||| ||| ||||||||||||| |||||||||| | || ||||||||| ||||||||    
T  4810600 ggggttaaagttaaccgtcgggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaattatgggaccaaaataaaaatttg 4810501  T
Q  504 aaattatttgagggaccattggatcaaataagcc 537  Q
    ||| |||||||||||||||| |||||||||||||    
T  4810500 aaagtatttgagggaccattagatcaaataagcc 4810467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 290 - 537
Target Start/End: Complemental strand, 42871060 - 42870811
Alignment:
Q  290 acatgcataattcaatgatcatc-ttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtc 387  Q
    |||||| |||||||||| ||||| |||||||||| | |||||||||||| |||| |  ||| ||||||||||||||| ||||| ||||||||| ||||||    
T  42871060 acatgcgtaattcaatggtcatccttttaaaacaca-gatcaaacggtttaaattacaaaatttaataaggtctacggtggaccactcttaagattggtc 42870962  T
Q  388 caccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgag 486  Q
    ||| ||||||||| |||||| ||||| ||||| |||| |||| ||| || | || || |||||  | |||||| ||||| || |||||||||| |||| |    
T  42870961 cacaatagacatcttttggggttaaacttaacagtcaggattcattcggcaaacagacgaaaaagtaagggactaaaacgtacgttttattaattgtggg 42870862  T
Q  487 accaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||||||||    
T  42870861 accaaaatgaaaacttgaaattatttaggaaaccattggatcaaataagcc 42870811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 324 - 541
Target Start/End: Complemental strand, 30786888 - 30786670
Alignment:
Q  324 aagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaa--gttaaccg 420  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||||  || | ||||||  |||||| |    
T  30786888 aagatcaaacggttaaaattaacaaaattaataaggtttatgatggaccacttttaaagttgatccaccatagacat--ttagagttaaaaagttaacag 30786791  T
Q  421 tcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacc 520  Q
    ||   |||||||||| | |||||| ||||  ||||||| ||||| ||| |||||||||| | || || ||||||||||| || ||||||||||| |||||    
T  30786790 tcggaatttatttggcaaacggagaaaaaagtgagggatcaaaatatacgttttattaattatgtgatcaaaatgaaaacttaaaattatttgaaggacc 30786691  T
Q  521 attggatcaaataagccttaa 541  Q
    |||| ||||||||||||||||    
T  30786690 attgaatcaaataagccttaa 30786670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 325 - 537
Target Start/End: Complemental strand, 32694039 - 32693828
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgat-ggacactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    |||||||||||||||||| || ||||||||||||||||| ||| || |||| |||||||||||||| |||| ||||  ||   |||||||||||| ||      
T  32694039 agatcaaacggttaaaattaataaaattaataaggtctatgataggccacttttaaggttggtccatcatatacat--ttaaagttaaagttaactgttg 32693942  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
     ||||||||||| | |||||||||||| ||| |||||||| | ||||||||||||| |||| |||||||||||||| || |||||| ||   ||||||||    
T  32693941 ggatttatttggcaaacggaggaaaatctgaaggaccaaagcgtatgttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggaccatt 32693842  T
Q  524 ggatcaaataagcc 537  Q
    | ||||||||||||    
T  32693841 gaatcaaataagcc 32693828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 322 - 538
Target Start/End: Original strand, 32695176 - 32695394
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttggg-ttaaagttaacc 419  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| | ||||||| ||||| |||||||||||||||||||| ||||| |||||     
T  32695176 aaaaaatcaaacggtttaaattaaaataattaataggatctatggtggaccaatcttaagattggttcaccatagacatcatttggggttaaacttaacg 32695275  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    |||| || | |||||| | || ||||||||  ||| ||||  |||| || |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  32695276 gtcaggactaatttggcaaacagaggaaaacgtgaaggacttaaacgtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggac 32695375  T
Q  520 cattggatcaaataagcct 538  Q
    || || |||||||||||||    
T  32695376 caatgaatcaaataagcct 32695394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 334 - 539
Target Start/End: Complemental strand, 41629908 - 41629704
Alignment:
Q  334 ggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatt 432  Q
    ||||||||| ||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||| |  || | ||| |||||||| |||  ||||||||    
T  41629908 ggttaaaattaacaaaattaataaggtatacgatgaaccacttttaaggttggttcaccatagactt--ttggagttcaagttaacggtcgggatttatt 41629811  T
Q  433 tggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaat 532  Q
    ||| | ||||| |||||  ||||||| ||||| ||| |||||||||| |||||||||||||| |||| ||||||||||||  ||||| | ||||||||||    
T  41629810 tggcaaacggaagaaaacttgagggatcaaaatatacgttttattaattgtgagaccaaaataaaaacttgaaattatttaggggactaatggatcaaat 41629711  T
Q  533 aagcctt 539  Q
    || ||||    
T  41629710 aaacctt 41629704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 325 - 509
Target Start/End: Original strand, 42100013 - 42100196
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||  ||   |||||||||||| |||     
T  42100013 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaggttggtccaccaaagacat--ttgaagttaaagttaacagtcg 42100110  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
     || |||||||| | |||||||||||||||||||| ||||||     ||||||||| |||||||||||||||||||  ||||||||    
T  42100111 ggaattatttggcaaacggaggaaaatatgagggatcaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaatta 42100196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 371 - 538
Target Start/End: Original strand, 42872143 - 42872308
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatg 470  Q
    ||||||||||||||||| |||||||||||  ||  |||||||||||||||||| ||||||||||  | |||||||||||  ||| |||| ||||| || |    
T  42872143 cactcttaaggttggtctaccatagacat--ttgaggttaaagttaaccgtcaggatttatttgacaaacggaggaaaaagtgaaggactaaaacgtacg 42872240  T
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    ||||||| | | |||||  |||||||||| || ||||||||| |||||||||||||||||||||||||    
T  42872241 ttttattcattatgagattaaaatgaaaacttaaaattatttaagggaccattggatcaaataagcct 42872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 325 - 537
Target Start/End: Complemental strand, 32797350 - 32797136
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| || | | ||||||||| |||| |||||||||  || | |||||| ||||| | |     
T  32797350 agatcgaatggttaaaattaacaaaattaataaggtctacgatgaaccatttttaaggttgatccatcatagacat--ttggagttaaacttaacggccg 32797253  T
Q  424 tgatttatt---tggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacc 520  Q
     ||||||||   ||||| |||||||||||  ||||||||  |||| || |||||||||| |||| |||||||||||||| |||||||||||| |||||||    
T  32797252 cgatttattatttggtaaacggaggaaaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggacc 32797153  T
Q  521 attggatcaaataagcc 537  Q
    | | |||||||||||||    
T  32797152 aatagatcaaataagcc 32797136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 287 - 520
Target Start/End: Complemental strand, 22551254 - 22551022
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    |||||||||| ||||||||  ||||||||| ||| || ||||||||||||| |||| |  ||| |||||||||| || | |||| |||| |||||||| |    
T  22551254 tagacatgcaaaattcaattgtcatctttttaaaaaacagatcaaacggtttaaattacaaaatttaataaggtttatggtggatcacttttaaggtttg 22551155  T
Q  386 tccaccatagacatcatttgggttaaagttaaccgtc-atgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtg 484  Q
    ||||||||||| ||  || |||||||| |||||  || | ||||||||||| | | |||| ||||  ||||||||||||| ||| |||||||||| ||||    
T  22551154 tccaccatagagat--ttggggttaaacttaacaatccaggatttatttggcaaatggagaaaaag-tgagggaccaaaagatacgttttattaattgtg 22551058  T
Q  485 agaccaaaatgaaaatttgaaattatttgagggacc 520  Q
     ||||||||| |||| ||||||||||||||||||||    
T  22551057 ggaccaaaataaaaacttgaaattatttgagggacc 22551022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 303 - 512
Target Start/End: Complemental strand, 6398014 - 6397806
Alignment:
Q  303 aatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatca 401  Q
    |||||||||| |||  || || |||||||| |||| |||| || ||||||||||||||||| | ||||| ||| | |||||||||  |||||||   | |    
T  6398014 aatgatcatcctttttaaaaacagatcaaatggtttaaattaaaaaaattaataaggtctatggtggaccactgtaaaggttggtttaccatag---tta 6397918  T
Q  402 tttgg-gttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaat 500  Q
    ||||| |||||| |||||  ||||||||||||||| | |||||| |||| ||||||||| ||||  || |||||||||| |||| |||||||||||||||    
T  6397917 tttggagttaaatttaacattcatgatttatttggcaaacggagaaaaaaatgagggactaaaatgtaagttttattaattgtgggaccaaaatgaaaat 6397818  T
Q  501 ttgaaattattt 512  Q
     |||||||||||    
T  6397817 atgaaattattt 6397806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 325 - 512
Target Start/End: Complemental strand, 45279889 - 45279703
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| |||||||||| ||||||||||||| ||| ||| |||||  |||||||||||| ||||  || | ||||||||||||||||     
T  45279889 agatcgaatggttaaaattaacaaaattattaaggtctacgatagaccacttttaagactggtccaccatatacat--ttagagttaaagttaaccgtcg 45279792  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattattt 512  Q
     ||||||||||  | ||| |  ||||  |||||||||||||| || |||||||||| |||  ||| |||||||||||||||||||||||    
T  45279791 ggatttatttgccaaacgaaaaaaaacttgagggaccaaaacgtacgttttattaattgtatgactaaaatgaaaatttgaaattattt 45279703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 26696642 - 26696529
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | | |||||||||  |||||||||||||  ||||||||||||| |||| |||||||||||||| ||||||||| ||  ||||||||||    
T  26696642 gatttatttggcaaatggaggaaaaagtgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattaggggaccattg 26696543  T
Q  525 gatcaaataagcct 538  Q
     |||||||||||||    
T  26696542 aatcaaataagcct 26696529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 317 - 537
Target Start/End: Complemental strand, 239643 - 239424
Alignment:
Q  317 aaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagtt 415  Q
    |||| ||||||||||| | ||||||| ||||||||| |||| |||||||  ||||  ||| ||| |||| ||| ||||||||||  || |||||||||||    
T  239643 aaaaaaaaagatcaaaggattaaaattaacaaaattgataaagtctacggcggaccatctataatgttgatcc-ccatagacat--ttggggttaaagtt 239547  T
Q  416 aaccgtcat-gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttga 514  Q
    |||   ||| ||||||||||  | ||| |||||||  |||||||| ||||||  |||||| |||| |||| ||| ||||||||||| ||||||||||||     
T  239546 aacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgg 239447  T
Q  515 gggaccattggatcaaataagcc 537  Q
    ||||| | |||||||||||||||    
T  239446 gggactaatggatcaaataagcc 239424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 317 - 537
Target Start/End: Complemental strand, 792998 - 792779
Alignment:
Q  317 aaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagtt 415  Q
    |||| ||||||||||| | ||||||| ||||||||| |||| |||||||  ||||  ||| ||| |||| ||| ||||||||||  || |||||||||||    
T  792998 aaaaaaaaagatcaaaggattaaaattaacaaaattgataaagtctacggcggaccatctataatgttgatcc-ccatagacat--ttggggttaaagtt 792902  T
Q  416 aaccgtcat-gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttga 514  Q
    |||   ||| ||||||||||  | ||| |||||||  |||||||| ||||||  |||||| |||| |||| ||| ||||||||||| ||||||||||||     
T  792901 aacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgg 792802  T
Q  515 gggaccattggatcaaataagcc 537  Q
    ||||| | |||||||||||||||    
T  792801 gggactaatggatcaaataagcc 792779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 425 - 539
Target Start/End: Original strand, 28420180 - 28420294
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||  | ||||||||||| ||||||||| ||||| | ||||||||||| | || |||||||||||||| |||||||||||| |||||||| ||    
T  28420180 gatttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 28420279  T
Q  525 gatcaaataagcctt 539  Q
    |||| | ||||||||    
T  28420280 gatctattaagcctt 28420294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 407 - 537
Target Start/End: Original strand, 30787588 - 30787718
Alignment:
Q  407 gttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaa 506  Q
    ||||||||||||   || ||||||||||| | ||||| |||||  ||||||||||||| |||| ||||||||| | || |||||||||||||| || |||    
T  30787588 gttaaagttaacatacaggatttatttggcaaacggaagaaaaagtgagggaccaaaatatatattttattaattatgggaccaaaatgaaaacttaaaa 30787687  T
Q  507 ttatttgagggaccattggatcaaataagcc 537  Q
    ||||||||| || |||| |||||||||||||    
T  30787688 ttatttgagagaacattagatcaaataagcc 30787718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 538
Target Start/End: Complemental strand, 28418916 - 28418803
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||||||||  |||||||| ||||| | ||||||||||| | || |||||||||||||| |||||||||||| |||||||| ||    
T  28418916 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 28418817  T
Q  525 gatcaaataagcct 538  Q
    |||| | |||||||    
T  28418816 gatctattaagcct 28418803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 324 - 537
Target Start/End: Original strand, 212618 - 212830
Alignment:
Q  324 aagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagttaaccgtc 422  Q
    ||||||||| | ||||||| ||||||||| |||| |||||||  ||||  ||| ||| |||| ||| ||||||||||  || ||||||||||||||   |    
T  212618 aagatcaaaggattaaaattaacaaaattgataaagtctacggcggaccatctataatgttgatcc-ccatagacat--ttggggttaaagttaacaccc 212714  T
Q  423 at-gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    || ||||||||||  | ||| |||||||  |||||||| ||||||  |||||| |||| |||| ||| ||||||||||| |||||||||||| ||||| |    
T  212715 atagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggacta 212814  T
Q  522 ttggatcaaataagcc 537  Q
     |||||||||||||||    
T  212815 atggatcaaataagcc 212830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 324 - 537
Target Start/End: Original strand, 726241 - 726453
Alignment:
Q  324 aagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagttaaccgtc 422  Q
    ||||||||| | ||||||| ||||||||| |||| |||||||  ||||  ||| ||| |||| ||| ||||||||||  || ||||||||||||||   |    
T  726241 aagatcaaaggattaaaattaacaaaattgataaagtctacggcggaccatctataatgttgatcc-ccatagacat--ttggggttaaagttaacaccc 726337  T
Q  423 at-gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    || ||||||||||  | ||| |||||||  |||||||| ||||||  |||||| |||| |||| ||| ||||||||||| |||||||||||| ||||| |    
T  726338 atagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggacta 726437  T
Q  522 ttggatcaaataagcc 537  Q
     |||||||||||||||    
T  726438 atggatcaaataagcc 726453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 324 - 537
Target Start/End: Original strand, 798742 - 798954
Alignment:
Q  324 aagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacatcatttgggttaaagttaaccgtc 422  Q
    ||||||||| | ||||||| ||||||||| |||| |||||||  ||||  ||| ||| |||| ||| ||||||||||  || ||||||||||||||   |    
T  798742 aagatcaaaggattaaaattaacaaaattgataaagtctacggcggaccatctataatgttgatcc-ccatagacat--ttggggttaaagttaacaccc 798838  T
Q  423 at-gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    || ||||||||||  | ||| |||||||  |||||||| ||||||  |||||| |||| |||| ||| ||||||||||| |||||||||||| ||||| |    
T  798839 atagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggacta 798938  T
Q  522 ttggatcaaataagcc 537  Q
     |||||||||||||||    
T  798939 atggatcaaataagcc 798954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 289 - 540
Target Start/End: Original strand, 13117503 - 13117754
Alignment:
Q  289 gacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtc 387  Q
    |||||||||||| ||||| |  |||||||||| |||| ||||||||||| | || || | |||||||| | |||| ||||||| ||| |||| |||||||    
T  13117503 gacatgcataatccaatggttctcttttaaaa-aaaacatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtc 13117601  T
Q  388 caccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgaga 487  Q
    ||| ||| | ||||||||||||||| || |  |||  ||||||||||| | || ||||||||| |||||||| |||||     ||||||||| | || ||    
T  13117602 cactatatagatcatttgggttaaacttgatggtcgggatttatttggcaaacagaggaaaatgtgagggactaaaacgccatttttattaattatggga 13117701  T
Q  488 ccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctta 540  Q
    ||||||||||||  ||||||||  | ||||||||   |||| |||||||||||    
T  13117702 ccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctta 13117754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 325 - 538
Target Start/End: Complemental strand, 13116539 - 13116327
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| ||||||| ||||| |||||||||||||| ||||| ||| |||||| |  ||||||||  || | |||||||||||| |||     
T  13116539 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctgaagattggtctattatagacat--ttggagttaaagttaacagtcg 13116442  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
     ||||||||||| | |||||||||||| ||| |||| |||||     ||||||||| |||| ||||||||||||||  ||||||||  | ||||||||      
T  13116441 ggatttatttggcaaacggaggaaaatgtgaaggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 13116342  T
Q  524 ggatcaaataagcct 538  Q
     |||| |||||||||    
T  13116341 cgatctaataagcct 13116327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 376 - 537
Target Start/End: Original strand, 8571574 - 8571735
Alignment:
Q  376 ttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatg--atttatttggtatacggaggaaaatatgagggaccaaaacatatgttt 473  Q
    |||| |||||||||||||||||||  || |||||||| ||||| | |  |  |||||||||||| |||||| |||| |||| |||||||||| || ||||    
T  8571574 ttaaagttggtccaccatagacat--ttggggttaaacttaacagactagggatttatttggtaaacggagaaaaaaatgaaggaccaaaacgtacgttt 8571671  T
Q  474 tattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    |||||| |||  ||||||||||||||| |||||||| ||  | ||||| | |||||||||||||    
T  8571672 tattaattgtatgaccaaaatgaaaatgtgaaattagttaggagaccaatagatcaaataagcc 8571735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 537
Target Start/End: Original strand, 12850465 - 12850513
Alignment:
Q  489 caaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12850465 caaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 12850513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 470 - 538
Target Start/End: Original strand, 41630175 - 41630243
Alignment:
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    |||||||||| |||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  41630175 gttttattaattgtgagactaaaatgaaaatttaaaattatttaaggaaccattggatcaaataagcct 41630243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 374 - 509
Target Start/End: Complemental strand, 42877778 - 42877645
Alignment:
Q  374 tcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttt 473  Q
    ||||||||||||||||||||| ||||  || ||||||||||||||||||  ||||||||||    ||| ||  |||  ||||||||||||||||  ||||    
T  42877778 tcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggatttatttgactgacgaagacaaacgtgagggaccaaaacatgagttt 42877681  T
Q  474 tattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    |||||  | ||||||||||||||||| |||||||||    
T  42877680 tattagttatgagaccaaaatgaaaacttgaaatta 42877645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 287 - 509
Target Start/End: Original strand, 14840767 - 14840989
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    |||||| ||||||||||||| ||||||||| | | || | ||||||||||| |||| || ||| ||||||||  ||| | |||| |||| |||| |||||    
T  14840767 tagacacgcataattcaatggtcatctttttagaaaacatatcaaacggtttaaattaaaaaatttaataagaactatggtggatcacttttaatgttgg 14840866  T
Q  386 tccaccatagacatcatttgggttaaagtta--accgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgt 483  Q
    ||||||||||||||  ||  ||||||| |||  | ||  | |||||||||| || ||||||  |||||||||||||||||||||   ||||||||  | |    
T  14840867 tccaccatagacat--ttgtggttaaacttaagaacgaga-gatttatttgatagacggagacaaatatgagggaccaaaacatgaattttattagttat 14840963  T
Q  484 gagaccaaaatgaaaatttgaaatta 509  Q
    |  |||||||||||||||||||||||    
T  14840964 ggtaccaaaatgaaaatttgaaatta 14840989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 6398483 - 6398577
Alignment:
Q  405 gggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaa 499  Q
    |||||||| ||||| |||||||||||||||  | ||||||||||| ||||||||| |||||   ||||||||||| | |||||||||||||||||    
T  6398483 gggttaaacttaacagtcatgatttatttgacaaacggaggaaaaaatgagggactaaaacgcttgttttattaattatgagaccaaaatgaaaa 6398577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 452 - 537
Target Start/End: Complemental strand, 8570201 - 8570116
Alignment:
Q  452 tgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    |||||||||||||| || |||||||||| |||  ||||||||||||||  |||||||| ||  |||||||||||||||||||||||    
T  8570201 tgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaacgtgaaattaattaggggaccattggatcaaataagcc 8570116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 211705 - 211612
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
    ||||||||||||| |||||| ||||  | |||||| ||||| | ||||||||||| |||| ||||||||||||||  ||||||||||| |||||    
T  211705 gatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 211612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 518
Target Start/End: Original strand, 240551 - 240644
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
    ||||||||||||| |||||| ||||  | |||||| ||||| | ||||||||||| |||| ||||||||||||||  ||||||||||| |||||    
T  240551 gatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 240644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 725328 - 725235
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
    ||||||||||||| |||||| ||||  | |||||| ||||| | ||||||||||| |||| ||||||||||||||  ||||||||||| |||||    
T  725328 gatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 725235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 518
Target Start/End: Original strand, 793906 - 793999
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgaggga 518  Q
    ||||||||||||| |||||| ||||  | |||||| ||||| | ||||||||||| |||| ||||||||||||||  ||||||||||| |||||    
T  793906 gatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 793999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 537
Target Start/End: Original strand, 13197961 - 13198059
Alignment:
Q  439 acggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 537  Q
    |||||||||||  ||||||||  |||| ||  ||||||||| |||| |||||||| ||||| | |||||||||| | ||||||||||| ||||||||||    
T  13197961 acggaggaaaaagtgagggacttaaacgtaccttttattaattgtgggaccaaaacgaaaactcgaaattatttaatggaccattggagcaaataagcc 13198059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 423
Target Start/End: Original strand, 24192555 - 24192666
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggtt 409  Q
    |||||||| | |||| |||||||||||  ||| || | |||||||| | |||| | ||||| ||||||||||||||||||||||||||||  || |||||    
T  24192555 tcttttaagaaaaaaaatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccatagacat--ttagggtt 24192652  T
Q  410 aaagttaaccgtca 423  Q
    ||||||||| ||||    
T  24192653 aaagttaacagtca 24192666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 538
Target Start/End: Complemental strand, 42098777 - 42098560
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcattt-gggttaaagttaacc 419  Q
    |||| ||||||||||| |||| ||   |||||||| | |||| | ||||| ||| ||||||||||||||||| ||||||||||| |||||||| |||||     
T  42098777 aaaaaatcaaacggttgaaattaaagtaattaataggatctatggtggaccacttttaaggttggtccaccaaagacatcatttggggttaaaattaaca 42098678  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    |||  ||||||||||| | ||||||  |||  || |||| ||||||     ||||||||| |||| ||||||||||||||  ||||||||  | ||||||    
T  42098677 gtc-ggatttatttggcaaacggagacaaacgtgggggatcaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggac 42098579  T
Q  520 cattggatcaaataagcct 538  Q
    ||   |||| |||||||||    
T  42098578 caaacgatctaataagcct 42098560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 452 - 521
Target Start/End: Original strand, 17702308 - 17702377
Alignment:
Q  452 tgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    ||||||||||||||||| |||||||||  | || |||||||||||||||| ||||||| || ||||||||    
T  17702308 tgagggaccaaaacataggttttattagttatgggaccaaaatgaaaattggaaattaattaagggacca 17702377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 24305266 - 24305160
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttgggtt 409  Q
    ||||||||||||||||||||||  ||| || |  | |||||||||| | |||| ||| || ||||||||| |||||||||||||||||||  || |||||    
T  24305266 tcttttaaaacaaaagatcaaatagttgaagtttaaaaaattaataggatctaagatagatcactcttaatgttggtccaccatagacat--ttagggtt 24305169  T
Q  410 aaagttaac 418  Q
    |||||||||    
T  24305168 aaagttaac 24305160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 509
Target Start/End: Complemental strand, 38696521 - 38696334
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    |||| |||||| ||||||||| |  ||||||||| || |||| | ||||| ||| |||||||||||| |||||||||||  || |||||||| ||||  |    
T  38696521 aaaaaatcaaagggttaaaattataaaaattaattagatctatggtggaccacttttaaggttggtctaccatagacat--ttagggttaaacttaatag 38696424  T
Q  421 tcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
      | | |||||||||    ||||||| |||  ||||||||||||||||  |||||||||  | ||||||||||||||||| || ||||||    
T  38696423 caagggatttatttgaccgacggaggcaaacttgagggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttaaaatta 38696334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 44933829 - 44933874
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  44933829 cacacgagtaaattactcaaatgcc-cctcggcagttaactgccgaa 44933874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 668
Target Start/End: Complemental strand, 7121888 - 7121841
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaaatt 668  Q
    |||| |||||||||||||||||||| ||||||||||||||| |||||||    
T  7121888 acacaagtaaattactcaaatgcct-ctcggcagttaactgtcgaaatt 7121841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 688
Target Start/End: Complemental strand, 38331066 - 38331023
Alignment:
Q  645 cctcggcagttaactgccgaaattcaatttaatccatcggcact 688  Q
    |||||||||||||||||||||||||| ||| | |||||||||||    
T  38331066 cctcggcagttaactgccgaaattcagtttcacccatcggcact 38331023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 2335251 - 2335206
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  2335251 cacacgagtaaattactcaaatgcc-cctcggcagttaactaccgaa 2335206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 27502668 - 27502623
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  27502668 cacacgagtaaattactcaaatgcc-cctcggcagttaactgtcgaa 27502623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 521
Target Start/End: Original strand, 38697026 - 38697108
Alignment:
Q  439 acggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    ||||||| |||| ||| ||| ||||||||  |||||||||  | || |||||||||||||| | ||||||| |||||||||||    
T  38697026 acggaggcaaatgtgaaggatcaaaacatgagttttattagttatgggaccaaaatgaaaactggaaattaattgagggacca 38697108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 661
Target Start/End: Original strand, 43362293 - 43362334
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgc 661  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  43362293 cacacgagtaaattactcaaatgcct-ctcggcagttaactgc 43362334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 665
Target Start/End: Original strand, 28694049 - 28694093
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  28694049 acacgagtaaattactcaaatgtc-cctcggcagttaactgccgaa 28694093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 619 - 664
Target Start/End: Original strand, 31184563 - 31184607
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccga 664  Q
    ||||| |||||||||||||||||||| |||| ||||||||||||||    
T  31184563 cacacgagtaaattactcaaatgcct-ctcgtcagttaactgccga 31184607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 665
Target Start/End: Complemental strand, 39277563 - 39277519
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||    
T  39277563 acacgagtaaattattcaaatgcc-cctcggcagttaactgccgaa 39277519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 509
Target Start/End: Original strand, 45437503 - 45437572
Alignment:
Q  440 cggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    |||||| ||| | |||||||||||||||  |||||||||| | || || ||||||||||| |||||||||    
T  45437503 cggaggcaaacacgagggaccaaaacatgagttttattaattatgggatcaaaatgaaaacttgaaatta 45437572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 322 - 538
Target Start/End: Original strand, 54086 - 54304
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttggg-ttaaagttaacc 419  Q
    |||| ||||||| ||| |||| || | |||||||| | |||| | ||||| ||| |||||||||||||||||||||||||||||||| ||| | |||||     
T  54086 aaaaaatcaaacagtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttggggttatacttaaca 54185  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    |||| ||||||||||| | |||||||||||| ||||||||||||||  | |||||||||| |||| ||||||||| |||| |||||||||||||||||||    
T  54186 gtcacgatttatttggcaaacggaggaaaatttgagggaccaaaacgcacgttttattaattgtgcgaccaaaattaaaacttgaaattatttgagggac 54285  T
Q  520 cattggatcaaataagcct 538  Q
    || ||||||||||||||||    
T  54286 caatggatcaaataagcct 54304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 325 - 531
Target Start/End: Complemental strand, 52801 - 52596
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| ||||| |||||| || |||||||||||||||||| || ||| | | ||||||||||||||||||| ||||  ||   |||||||||||| |||     
T  52801 agatcgaacggataaaattaagaaaattaataaggtctaccatagaccatttttaaggttggtccaccatatacat--ttaaagttaaagttaactgtcg 52704  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
     ||||||||||| | |||||| ||||| |||||||||||||| ||  ||||||||| |||| || ||||||||||| ||||||||| ||   ||||||||    
T  52703 ggatttatttggcaaacggagaaaaatctgagggaccaaaacgtacattttattaattgtgggatcaaaatgaaaacttgaaattaattagaggaccatt 52604  T
Q  524 ggatcaaa 531  Q
    | ||||||    
T  52603 gaatcaaa 52596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 322 - 521
Target Start/End: Original strand, 43476 - 43677
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttggg-ttaaagttaacc 419  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||| |||||||||||||||||||| ||||| ||||| ||||||    
T  43476 aaaaaatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaacc 43575  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    |||| || |||||||| | |||||||||||  ||||||||  ||||||| |||||||||| | || ||||||||| |||| || ||||||||||||||||    
T  43576 gtcaggacttatttggcaaacggaggaaaaagtgagggacttaaacatacgttttattaattatgggaccaaaataaaaacttaaaattatttgagggac 43675  T
Q  520 ca 521  Q
    ||    
T  43676 ca 43677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 325 - 538
Target Start/End: Original strand, 109652 - 109864
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||| ||||  ||   |||||||||||  ||      
T  109652 agatcaaatggttaaaattaacaaaattaataaggtctacgatggactatttttaaggttggtccaccatatacat--ttgaagttaaagttaatagttg 109749  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccatt 523  Q
     |||| |||||| | |  ||| ||||  |||||||| ||||  || |||||||||| |||  |||||||||||||| |||||||||||| ||||||||||    
T  109750 ggattcatttggcaaattgagaaaaaagtgagggactaaaatgtacgttttattaattgtaggaccaaaatgaaaacttgaaattatttaagggaccatt 109849  T
Q  524 ggatcaaataagcct 538  Q
    | |||||||||||||    
T  109850 gaatcaaataagcct 109864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 371 - 509
Target Start/End: Complemental strand, 108677 - 108539
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    |||| ||||||||||||||||||| | || ||||||| ||||| ||||| |  | ||||||||||| | | ||||||||| |||||||| |||||| ||     
T  108677 cacttttaaggttggtccaccata-atattatttggggttaaacttaactgcaaggatttatttggcaaatggaggaaaaaatgagggatcaaaacgtac 108579  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    |||||||||| | || || ||||||| ||| | |||||||    
T  108578 gttttattaattatgggatcaaaatgtaaaatggaaatta 108539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 539
Target Start/End: Original strand, 2404 - 2595
Alignment:
Q  347 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgg-gttaaagttaaccgtcatgatttatttggtatacggag 444  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||  |||| |||||| |||||||||||| |||   |||||||||| | || |||    
T  2404 aaaattaataaggtctacgatagaccacttttaaggttggtccaccatt-acat-atttggagttaaagttaacagtcggaatttatttggaaaacagag 2501  T
Q  445 gaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctt 539  Q
    |||||  | |||||||||||  ||  ||||||||| |||| |||||||||||||| | ||||||| ||||||||||| | |||| ||||||||||    
T  2502 gaaaaactaagggaccaaaaggtactttttattaattgtgggaccaaaatgaaaa-tggaaattaattgagggaccaattgatctaataagcctt 2595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 539
Target Start/End: Original strand, 6452517 - 6452631
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | ||||||||||| |||||||||  |||| || |||||||||| | || |||||||||||||| ||||||||||||  ||||||| ||    
T  6452517 gatttatttggcaaacggaggaaaaaatgagggactcaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattatttaggggaccaatg 6452616  T
Q  525 gatcaaataagcctt 539  Q
    |||||||||||||||    
T  6452617 gatcaaataagcctt 6452631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 439 - 541
Target Start/End: Complemental strand, 34023982 - 34023880
Alignment:
Q  439 acggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    |||||||||||  |||||||||||||  || |||||||||| ||||  ||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  34023982 acggaggaaaaggtgagggaccaaaaggtacgttttattaattgtggtaccaaaatgaaaacttaaaattatttgagggaccatttgatcaaataagcct 34023883  T
Q  539 taa 541  Q
    |||    
T  34023882 taa 34023880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 322 - 537
Target Start/End: Original strand, 7311627 - 7311842
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    |||| ||||||||||| |||| || | |||||||| | | || | ||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||| |    
T  7311627 aaaaaatcaaacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttggttcaccatagacatcatttggattaaacttaactg 7311726  T
Q  421 tcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacc 520  Q
    | | ||||||||||| | |  ||  ||||  | |||||||||||  || | |||||||| |||| || ||||||||||| || ||||||||| |||||||    
T  7311727 tgaggatttatttggcaaatagataaaaaagtaagggaccaaaaggtacg-tttattaattgtgggatcaaaatgaaaacttaaaattatttaagggacc 7311825  T
Q  521 attggatcaaataagcc 537  Q
    |||| || |||||||||    
T  7311826 attgaattaaataagcc 7311842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 334 - 499
Target Start/End: Original strand, 23397270 - 23397434
Alignment:
Q  334 ggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatt 432  Q
    ||||||||| ||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||  ||   |||||| ||||| |||  ||||||||    
T  23397270 ggttaaaattaacaaaattaataaggtatacggtggactacttttaaggttggtccaccatagacat--ttgaagttaaatttaacggtcgggatttatt 23397367  T
Q  433 tggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaa 499  Q
    ||| | |||||||||||  |||||||| |||||     ||||||||| |||| ||||||||||||||    
T  23397368 tggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 23397434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 322 - 538
Target Start/End: Original strand, 29381632 - 29381849
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacatcatttggg-ttaaagttaacc 419  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | |||| ||||||||||||| |||||||| |||||||||||||| ||||| |||||     
T  29381632 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggatcactcttaaggtttgtccaccacagacatcatttggggttaaacttaact 29381731  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    ||   ||||||||||||| ||||||||||| |||| |||| ||||| |   ||||||||| |||| || ||||||||||||  |||||||  | ||||||    
T  29381732 gttg-gatttatttggtaaacggaggaaaagatgaaggactaaaacgtcatttttattaattgtgggatcaaaatgaaaataagaaattaaataagggac 29381830  T
Q  520 cattggatcaaataagcct 538  Q
    ||   |||| |||||||||    
T  29381831 caaacgatctaataagcct 29381849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 376 - 536
Target Start/End: Complemental strand, 7310433 - 7310275
Alignment:
Q  376 ttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgtttta 475  Q
    ||||||||||| ||||||||||||  || | |||||| ||||| | |  ||||||||||||| |||||| ||||  ||| ||||  ||||||| ||||||    
T  7310433 ttaaggttggttcaccatagacat--ttggagttaaacttaacagccgagatttatttggtaaacggagaaaaacctgaaggacttaaacatacgtttta 7310336  T
Q  476 ttaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagc 536  Q
    |||| | || |||||||||||||| || ||||||||| | |||||  ||||||||||||||    
T  7310335 ttaattatgggaccaaaatgaaaacttaaaattatttaaaggaccgatggatcaaataagc 7310275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 325 - 499
Target Start/End: Complemental strand, 29380400 - 29380227
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||  ||   |||||| ||||| |||     
T  29380400 agatcgaatggttaaaattaacaaaattaataaggtctacgatggactacttttaaggttgatccaccatatacat--ttgaagttaaaattaacggtcg 29380303  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaa 499  Q
     ||||||||||| | ||||| |||||  |||||||| |||||     |||| |||| |||| ||||||||||||||    
T  29380302 ggatttatttggcaaacggaagaaaaggtgagggactaaaacgccatttttgttaattgtgggaccaaaatgaaaa 29380227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 439 - 539
Target Start/End: Original strand, 34024084 - 34024183
Alignment:
Q  439 acggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcct 538  Q
    |||||||||||  ||||||| |||||  ||  ||||||||| |||| ||||||||||||||||||||||||||||| | | |||||||||||||||||||    
T  34024084 acggaggaaaaagtgagggatcaaaatgtacattttattaattgtgggaccaaaatgaaaatttgaaattatttga-gaatcattggatcaaataagcct 34024182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 297 - 435
Target Start/End: Original strand, 5187500 - 5187638
Alignment:
Q  297 taattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatag 395  Q
    |||| |||||||  |||||||||| |||| ||||||| ||| |||| || | |||||||| | |||| | || || ||| ||||||||||||||| ||||    
T  5187500 taatccaatgatgctcttttaaaataaaa-atcaaacagttgaaattaatataattaataggatctatggtgaaccacttttaaggttggtccactatag 5187598  T
Q  396 acatcatttgggttaaagttaaccgtcatgatttatttgg 435  Q
    ||| ||||||||||||| |||||||||| |||||||||||    
T  5187599 acaacatttgggttaaacttaaccgtcaggatttatttgg 5187638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 327 - 499
Target Start/End: Complemental strand, 17837825 - 17837652
Alignment:
Q  327 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcattt-gggttaaagttaaccgtcat 424  Q
    ||||||||||| |||| || | |||||||| | |||| | ||||| |||||||| ||| |||||||||||||||||||| |||||||| ||||| ||       
T  17837825 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaatgtttgtccaccatagacatcatttggggttaaacttaactgt-tg 17837727  T
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaa 499  Q
    ||||||||||||| ||||| ||||| ||||||||| |||||     ||||||||| ||||  |||||||||||||    
T  17837726 gatttatttggtaaacggaagaaaagatgagggactaaaacgccatttttattaattgtggaaccaaaatgaaaa 17837652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 425 - 537
Target Start/End: Complemental strand, 232284 - 232174
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||||||||  |||||||| ||||| |  |||||||||| | || |||||||||||||| |||||||||||| |||||||| ||    
T  232284 gatttatttggcaaacggaggaaaaagtgagggactaaaacgt--gttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaatg 232187  T
Q  525 gatcaaataagcc 537  Q
    |||| | ||||||    
T  232186 gatctattaagcc 232174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 325 - 499
Target Start/End: Original strand, 17839046 - 17839219
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtca 423  Q
    ||||| || ||||||||| ||||||||||||||||||||| |||||| ||| ||||||||  ||||||||  ||||  ||   |||||| ||||| |||     
T  17839046 agatcgaatggttaaaattaacaaaattaataaggtctacaatggactacttttaaggttaatccaccatctacat--ttgaagttaaaattaacggtcg 17839143  T
Q  424 tgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaa 499  Q
     ||||||||||| | |||||||||||  |||||||| |||||     ||||||||| |||| ||||||||||||||    
T  17839144 ggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 17839219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 371 - 509
Target Start/End: Original strand, 32506979 - 32507116
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtc-atgatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    |||||||||||||||||||||||||| ||  || |||||||| ||||| ||| | ||||||||||| | || ||| ||||| |||||||| ||||||       
T  32506979 cactcttaaggttggtccaccatagatat--ttggggttaaacttaacagtcaaggatttatttggcaaactgagaaaaatgtgagggactaaaacacca 32507076  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
     |||||||||||||| || |||||||||||  ||||||||    
T  32507077 tttttattaaatgtgggatcaaaatgaaaacatgaaatta 32507116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 512
Target Start/End: Complemental strand, 12669886 - 12669746
Alignment:
Q  371 cactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcat-gatttatttggtatacggaggaaaatatgagggaccaaaacatat 469  Q
    |||||||||||||||||||||||| ||||  ||  ||||||||||||| || |  ||||||||| | | |||||||||||  ||| |||| ||||| |      
T  12669886 cactcttaaggttggtccaccatacacat--ttgaggttaaagttaacagttagagatttatttagcaaacggaggaaaaagtgacggactaaaacttga 12669789  T
Q  470 gttttattaaatgtgagaccaaaatgaaaatttgaaattattt 512  Q
    |||||||||| |||||||||||||| ||||||| | |||||||    
T  12669788 gttttattaattgtgagaccaaaataaaaatttaatattattt 12669746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 542
Target Start/End: Complemental strand, 27080988 - 27080917
Alignment:
Q  471 ttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagccttaaa 542  Q
    ||||||||| ||| ||||||||||||||| | |||||||||| ||||| ||||||||||||||| |||||||    
T  27080988 ttttattaattgtaagaccaaaatgaaaactcgaaattatttaagggatcattggatcaaataatccttaaa 27080917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 348 - 509
Target Start/End: Complemental strand, 5186753 - 5186594
Alignment:
Q  348 aaattaataaggtctacgatggacactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttggtatacggaggaa 447  Q
    |||||||||||||||||||| |||  | |||||||| || ||||||||| ||  ||   |||||||||||| |||  ||||||||||| | |||||||||    
T  5186753 aaattaataaggtctacgattgaccattttaaggtttgttcaccatagatat--ttgaagttaaagttaacggtcgggatttatttggcaaacggaggaa 5186656  T
Q  448 aatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    || |||| |||  ||||| |   ||||||||| |||| ||||||||||||||  ||||||||    
T  5186655 aagatgatggattaaaacgtcacttttattaattgtgtgaccaaaatgaaaacatgaaatta 5186594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 420 - 539
Target Start/End: Complemental strand, 6452399 - 6452280
Alignment:
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    |||| ||||||||||| | |||||||||||  |||||||| ||||| ||  ||||||||| | |  |||||||| ||||| ||||||||||||  |||||    
T  6452399 gtcaggatttatttggcaaacggaggaaaaagtgagggactaaaacgtaccttttattaattataggaccaaaacgaaaacttgaaattatttaggggac 6452300  T
Q  520 cattggatcaaataagcctt 539  Q
    |  ||||| |||||||||||    
T  6452299 cgatggattaaataagcctt 6452280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 287 - 499
Target Start/End: Complemental strand, 23392464 - 23392250
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaag-atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttg 384  Q
    ||||| ||||||||  |||| | ||||||||||| ||||  ||||||||||| |||| || | |||||||| | |||| | ||||| ||| |||||||||    
T  23392464 tagacttgcataatctaatggttatcttttaaaaaaaaaatatcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaaggttg 23392365  T
Q  385 gtccaccatagacatcatttggg-ttaaagttaaccgtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgt 483  Q
     |||||| ||| ||||||||||| ||||| |||||  | | ||||||||||| | |||||||||||  ||||||||  ||||     ||||||||| |||    
T  23392364 atccaccttag-catcatttggggttaaacttaacatttaggatttatttggcaaacggaggaaaaggtgagggacttaaacgccatttttattaattgt 23392266  T
Q  484 gagaccaaaatgaaaa 499  Q
    | ||||||||||||||    
T  23392265 gggaccaaaatgaaaa 23392250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 426 - 539
Target Start/End: Original strand, 15730036 - 15730150
Alignment:
Q  426 atttatttggtatacggaggaaaatatgagggaccaaaacatatgtttt-attaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    |||||||| | | ||||| |||||  |||||||||||||  ||| |||| ||||| |||| |||||||||||||| | ||||||| ||||||||||| ||    
T  15730036 atttatttagcaaacggaagaaaaagtgagggaccaaaatgtatttttttattaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaatg 15730135  T
Q  525 gatcaaataagcctt 539  Q
     ||| ||||||||||    
T  15730136 aatctaataagcctt 15730150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 443 - 535
Target Start/End: Original strand, 27082168 - 27082261
Alignment:
Q  443 aggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatt-tgagggaccattggatcaaataag 535  Q
    |||||||  ||||||||  |||||||  ||||||||| |||| |||||||||||||||| |||||||||  | |||||||||||||| ||||||    
T  27082168 aggaaaaagtgagggacttaaacatactttttattaattgtgggaccaaaatgaaaattcgaaattattcagggggaccattggatcgaataag 27082261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 509
Target Start/End: Complemental strand, 6701490 - 6701406
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||||||||||| | |||||||||||| |||||||| |||| |    ||||||||| |||| ||||||||||||||| ||||||||    
T  6701490 gatttatttggcaaacggaggaaaatgtgagggactaaaataccatttttattaattgtgggaccaaaatgaaaatatgaaatta 6701406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 467 - 535
Target Start/End: Original strand, 27967097 - 27967165
Alignment:
Q  467 tatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataag 535  Q
    |||||| |||||| |||| || ||||||||||| | | ||||||||| |||||||||||||||||||||    
T  27967097 tatgttctattaattgtgggatcaaaatgaaaactaggaattatttgggggaccattggatcaaataag 27967165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 664
Target Start/End: Original strand, 31146336 - 31146387
Alignment:
Q  613 ctaagacacaccagtaaattactcaaatgcctcctcggcagttaactgccga 664  Q
    ||||||||||||||||||||||| ||||||| |||  |||||||||||||||    
T  31146336 ctaagacacaccagtaaattactgaaatgcccccttagcagttaactgccga 31146387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 445 - 539
Target Start/End: Original strand, 233590 - 233684
Alignment:
Q  445 gaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcctt 539  Q
    ||||| ||||||||| ||||| | | ||||||||| | || |||||||||||||| |||||||||||| | |||||| | |||| | ||||||||    
T  233590 gaaaaaatgagggactaaaacgtgttttttattaattatgggaccaaaatgaaaaattgaaattatttaaaggaccaattgatctattaagcctt 233684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 2109487 - 2109532
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| |||||||||||||||| |||| |||||||||||||||||||    
T  2109487 cacacgagtaaattactcaaatacctc-tcggcagttaactgccgaa 2109532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 13164360 - 13164315
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  13164360 cacacgagtaaattactcaaatgcc-cctcggcagttaactaccgaa 13164315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Original strand, 25554675 - 25554720
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||    
T  25554675 cacacgagtaaattactcaaatacc-cctcggcagttaactgccgaa 25554720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 689
Target Start/End: Complemental strand, 1189149 - 1189112
Alignment:
Q  652 agttaactgccgaaattcaatttaatccatcggcactt 689  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  1189149 agttaactgccgaaatccaatttaatccatcgggactt 1189112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 689
Target Start/End: Original strand, 32616698 - 32616735
Alignment:
Q  652 agttaactgccgaaattcaatttaatccatcggcactt 689  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  32616698 agttaactgctcaaattcaatttaatccatcggcactt 32616735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 323 - 541
Target Start/End: Complemental strand, 21339 - 21121
Alignment:
Q  323 aaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaac--c 419  Q
    ||||||||||||||||||||  | ||||||||| | ||||| | ||||| ||||| ||||||||||||||||||||||  ||  ||||||| |||||  |    
T  21339 aaagatcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactctgaaggttggtccaccatagacat--ttgtggttaaacttaacaac 21242  T
Q  420 gtcatgatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggac 519  Q
    |  ||||||||||||| | |||||||||||  | ||||| |||||  ||  ||||||||| | || ||| |||||||||| |  |||||| ||||||| |    
T  21241 g-aatgatttatttggcaaacggaggaaaaactaagggatcaaaaggtactttttattaattatgggactaaaatgaaaaatgaaaattaattgaggggc 21143  T
Q  520 cattggatcaaataagccttaa 541  Q
    || |||||| ||||||||||||    
T  21142 caatggatctaataagccttaa 21121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 425 - 539
Target Start/End: Complemental strand, 18922 - 18808
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggaccattg 524  Q
    ||||||||||| | |||||| ||||  |||||||| |||||||| |||||||||||| || |||||||||||||| || ||||||||| | ||| || ||    
T  18922 gatttatttggcaaacggagtaaaaagtgagggactaaaacataagttttattaaatatgggaccaaaatgaaaacttaaaattatttaaaggatcaatg 18823  T
Q  525 gatcaaataagcctt 539  Q
    |||||||||| ||||    
T  18822 gatcaaataaacctt 18808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 521
Target Start/End: Original strand, 1048 - 1187
Alignment:
Q  381 gttggtccaccatagacatcatttgggttaaagttaaccgtcatga-tttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaa 479  Q
    |||||||||||||||||||  || ||||||||||||||   ||||| ||||||||    |||||||  ||| ||||||||||||||||  |||||||||     
T  1048 gttggtccaccatagacat--ttggggttaaagttaacacccatgaatttatttgactgacggaggtgaatttgagggaccaaaacatgagttttattac 1145  T
Q  480 atgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
     | || |||||||||||||| | |||||||||||||||||||    
T  1146 ttatgggaccaaaatgaaaactggaaattatttgagggacca 1187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 556 - 652
Alignment:
Q  294 gcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtcca 389  Q
    ||||||| ||||| ||||||||| ||| || ||||||||||||| |||| || ||| ||||||||||||| | |||| |||||||||||||||||||    
T  556 gcataatccaatggtcatctttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtcca 652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 322 - 509
Target Start/End: Complemental strand, 127646 - 127459
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 420  Q
    |||| ||| ||||||| |||| || || ||||||| | |||| | ||||| ||||||||||||| | ||||||||||||  ||  ||||||||||||| |    
T  127646 aaaaaatctaacggtttaaattaaaaacattaataggatctatggtggaccactcttaaggttgtttcaccatagacat--ttgaggttaaagttaactg 127549  T
Q  421 tcatg-atttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaatta 509  Q
    ||| | |||||||||    ||||||| ||| |||||||||||||||||  |||||||||  | || |||||||| ||||| |||||||||    
T  127548 tcagggatttatttgaccgacggaggcaaacatgagggaccaaaacatgagttttattagttatgggaccaaaacgaaaacttgaaatta 127459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 399
Target Start/End: Original strand, 8083 - 8171
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacat 399  Q
    |||||||||| |||  ||||||||||| |||| || | ||||||||   |||| ||||||| |||||||||||| ||||||||||||||    
T  8083 tcttttaaaaaaaacaatcaaacggtttaaattaaaataattaatataatctatgatggaccctcttaaggttgatccaccatagacat 8171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 287 - 435
Target Start/End: Complemental strand, 32822 - 32671
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaa--aacaaaagatcaaacggttaaaatgaacaaaat--taataaggtctacgatggac-actcttaagg 381  Q
    ||||||||||| ||  |||| || ||||||||  || |||||||||||||||| |||| || ||||   ||||| | |||| ||||||| |||| |||||    
T  32822 tagacatgcatgatctaatggtcctcttttaataaaaaaaagatcaaacggtttaaattaaaaaaaaaataataggatctatgatggaccactcctaagg 32723  T
Q  382 ttggtccaccatagacatcatttgggttaaagttaaccgtcatgatttatttgg 435  Q
    ||||||||||||||||||  ||  ||||||||||||| || | |||||||||||    
T  32722 ttggtccaccatagacat--ttaaggttaaagttaacagttaggatttatttgg 32671  T

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Target: scaffold0176 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 664
Target Start/End: Complemental strand, 696 - 653
Alignment:
Q  620 acaccagtaaattactcaaatgcctcctcggcagttaactgccga 664  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  696 acacgagtaaattactcaaatgcc-cctcggcagttaactgccga 653  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 521
Target Start/End: Complemental strand, 61961 - 61865
Alignment:
Q  425 gatttatttggtatacggaggaaaatatgagggaccaaaacatatgttttattaaatgtgagaccaaaatgaaaatttgaaattatttgagggacca 521  Q
    ||||||||||| | ||||| ||||| ||||||||| |||||     ||||||||| | |||||||||||||||||  |||||||||||  |||||||    
T  61961 gatttatttggcaaacggaagaaaagatgagggactaaaacgccatttttattaattatgagaccaaaatgaaaacatgaaattatttaggggacca 61865  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 69324 - 69279
Alignment:
Q  619 cacaccagtaaattactcaaatgcctcctcggcagttaactgccgaa 665  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||    
T  69324 cacacgagtaaattactcaaatacc-cctcggcagttaactgccgaa 69279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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