View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18688_low_5 (Length: 253)

Name: NF18688_low_5
Description: NF18688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18688_low_5
NF18688_low_5
[»] chr2 (6 HSPs)
chr2 (141-253)||(6562719-6562831)
chr2 (25-136)||(6563111-6563222)
chr2 (54-133)||(223892-223973)
chr2 (79-143)||(36903987-36904051)
chr2 (79-143)||(4428804-4428868)
chr2 (54-143)||(9047601-9047692)
[»] chr8 (3 HSPs)
chr8 (79-143)||(7642624-7642688)
chr8 (79-143)||(38573316-38573380)
chr8 (79-143)||(23518224-23518288)
[»] chr4 (9 HSPs)
chr4 (79-143)||(25231534-25231598)
chr4 (79-143)||(31861579-31861643)
chr4 (79-143)||(35808715-35808779)
chr4 (80-143)||(3121083-3121146)
chr4 (78-133)||(9093608-9093663)
chr4 (79-133)||(37624862-37624916)
chr4 (90-143)||(24504700-24504753)
chr4 (79-143)||(16958390-16958454)
chr4 (79-143)||(43595003-43595067)
[»] chr3 (3 HSPs)
chr3 (79-136)||(53466257-53466314)
chr3 (54-143)||(8108237-8108327)
chr3 (54-143)||(45249361-45249452)
[»] chr7 (10 HSPs)
chr7 (53-133)||(48488419-48488501)
chr7 (53-143)||(28646615-28646707)
chr7 (79-143)||(23247756-23247820)
chr7 (79-143)||(28514663-28514727)
chr7 (79-143)||(37869747-37869811)
chr7 (78-143)||(19086330-19086395)
chr7 (79-143)||(10624971-10625035)
chr7 (79-143)||(45618475-45618539)
chr7 (79-142)||(34503153-34503216)
chr7 (79-143)||(31191397-31191461)
[»] chr6 (1 HSPs)
chr6 (54-143)||(32147870-32147961)
[»] chr1 (3 HSPs)
chr1 (79-136)||(13984272-13984329)
chr1 (79-143)||(5892694-5892758)
chr1 (79-143)||(36563876-36563940)
[»] chr5 (3 HSPs)
chr5 (79-129)||(10285009-10285059)
chr5 (53-143)||(34338930-34339022)
chr5 (92-136)||(14663012-14663056)


Alignment Details
Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 6562831 - 6562719
Alignment:
Q  141 taaatgtttaagatccttccattgaagatgatctaatagttcttcattgtatctaaattttaaaataactttgattgtgtattaagttagtcaaaacata 240  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  6562831 taaatgtttaagacccttccattgaagatgatctaatagttcttcattgtatccaaattttaaaataattttgattgtgtattaagttagtcaaaacata 6562732  T
Q  241 ctctgatgttaaa 253  Q
    |||||||||||||    
T  6562731 ctctgatgttaaa 6562719  T

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Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 136
Target Start/End: Complemental strand, 6563222 - 6563111
Alignment:
Q  25 ggtcatgggaaactattaacaatgtgcttattgtttaagcatataaaactaactttttgcattgtaaattgtacggttataatttcaataagtatttgac 124  Q
    |||||||| ||| | |||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||     
T  6563222 ggtcatggaaaaatgttaacaatgtccttattgtttaagcatataaaagtaactttttgtattgtaaattgtgcggttataatttcaataagtgtttgat 6563123  T
Q  125 ttatatttttaa 136  Q
    ||||||||||||    
T  6563122 ttatatttttaa 6563111  T

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Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 223892 - 223973
Alignment:
Q  54 attgtttaagcatataaaactaac--tttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttt 133  Q
    ||||||||||||| ||||| || |  ||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  223892 attgtttaagcatctaaaagtagcaatttttgcattgaaaattgtacggttataacttcaataagtgtttgacttatatttt 223973  T

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Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 36904051 - 36903987
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||| ||||||||||||||| | || ||||||| |||||||| |||||| |||||||||    
T  36904051 ttttgcattggaaattgtacggttatgactttaataagtgtttgacttgtattttcaagacataa 36903987  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 4428868 - 4428804
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||| ||||| ||||| ||||||||| | || ||||| |||||||||||||| || |||||||||    
T  4428868 ttttacattgaaaattatacggttatgactttaataaatatttgacttatatcttcaagacataa 4428804  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 9047601 - 9047692
Alignment:
Q  54 attgtttaagcatataaaactaact--ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    ||||||||| ||||||||| ||||   |||| ||||| ||||||||||||||| | || || |||| |||||||| |||||| || ||||||    
T  9047601 attgtttaatcatataaaagtaacaacttttacattgaaaattgtacggttatgactttaacaagtgtttgacttgtattttcaaaacataa 9047692  T

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Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 7642688 - 7642624
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| || ||||||    
T  7642688 ttttgcattgtaaattgtacggttataacttcaacaagtgtttgacttatattttcaaaacataa 7642624  T

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Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 38573380 - 38573316
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||| ||||||||||||||||| ||||| || | ||||||||||||||| ||| |||||    
T  38573380 ttttgcattggaaattgtacggttataacttcaacaaatgtttgacttatattttcaaggcataa 38573316  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 23518288 - 23518224
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||| |||||||||||||   | || ||||| ||||||| |||||||||||||| ||||    
T  23518288 ttttgcattgaaaattgtacggttcagactttaataaatatttgatttatatttttaagatataa 23518224  T

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Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 25231534 - 25231598
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||| ||||||||||||||||| ||||| || ||||||||||||||||| |||||||||    
T  25231534 ttttgcattggaaattgtacggttataacttcaacaaatatttgacttatattttcaagacataa 25231598  T

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Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 31861579 - 31861643
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||| ||||||| |||||||||||| || |||| ||||||||||||||| |||||||||    
T  31861579 ttttgcattggaaattgtccggttataattttaacaagtgtttgacttatattttcaagacataa 31861643  T

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Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 35808779 - 35808715
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||| ||||||||||||||||| |||||  ||| ||||||||||||||| |||| ||||    
T  35808779 ttttgcattgaaaattgtacggttataacttcaactagtgtttgacttatattttcaagatataa 35808715  T

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Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 3121146 - 3121083
Alignment:
Q  80 tttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    ||||||||| ||||||||||||||||| ||||| || |  |||||||||||||| |||||||||    
T  3121146 tttgcattgaaaattgtacggttataacttcaacaaatgattgacttatattttcaagacataa 3121083  T

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Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 9093608 - 9093663
Alignment:
Q  78 tttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttt 133  Q
    ||||||||||| ||||||||||||||||| || || |||| |||||||||||||||    
T  9093608 tttttgcattgaaaattgtacggttataacttaaacaagtgtttgacttatatttt 9093663  T

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Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 37624916 - 37624862
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttt 133  Q
    |||||||||| ||||||||||||||||| || || |||| |||||||||||||||    
T  37624916 ttttgcattgaaaattgtacggttataactttaacaagtgtttgacttatatttt 37624862  T

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Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 24504753 - 24504700
Alignment:
Q  90 aaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    ||||||||||||||||| || |||||||||||||| |||||||| |||| ||||    
T  24504753 aaattgtacggttataactttaataagtatttgacatatattttaaagatataa 24504700  T

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Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 16958390 - 16958454
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||| ||||| |||||| ||| |||||| ||||| |||| ||||||||||||||| |||||||||    
T  16958390 ttttacattggaaattgcacgtttataacttcaacaagtgtttgacttatattttcaagacataa 16958454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 43595067 - 43595003
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    ||||| |||| ||||||||||||||||| ||||| |||  ||| ||||| ||||| |||||||||    
T  43595067 ttttgtattgaaaattgtacggttataacttcaagaagggtttaacttacattttcaagacataa 43595003  T

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Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 53466257 - 53466314
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaa 136  Q
    |||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||||    
T  53466257 ttttgcattgaaaattgtacgattataacttcaataagtgtttgacttatatttttaa 53466314  T

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Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 8108327 - 8108237
Alignment:
Q  54 attgtttaagcatataaaactaact--ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    ||||||||||||| ||||| ||||   |||||||||| ||||||||||||||||| ||||| ||||  |||||||||||||| ||| |||||    
T  8108327 attgtttaagcatctaaaagtaacaacttttgcattggaaattgtacggttataacttcaacaagt-gttgacttatattttcaaggcataa 8108237  T

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Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 45249361 - 45249452
Alignment:
Q  54 attgtttaagcatataaaactaact--ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    ||||||||||||||||||| || |   |||||||||| ||||||||||||||| | || || || | |||||||| |||||| |||||||||    
T  45249361 attgtttaagcatataaaagtagcaacttttgcattggaaattgtacggttatgactttaacaaatgtttgacttgtattttcaagacataa 45249452  T

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Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 48488419 - 48488501
Alignment:
Q  53 tattgtttaagcatataaaactaact--ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttt 133  Q
    |||||||||||||| ||||| || |   |||||||||| ||||||||||||||||| ||||| |||| |||||||||||||||    
T  48488419 tattgtttaagcatctaaaagtagcaacttttgcattggaaattgtacggttataacttcaacaagtgtttgacttatatttt 48488501  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 28646615 - 28646707
Alignment:
Q  53 tattgtttaagcatataaaactaact--ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||||||||||||| || |   |||| ||||| ||||||||||||||| | || || || | |||||||||||||||||||||||||    
T  28646615 tattgtttaagcatataaaagtagcaacttttacattggaaattgtacggttatgactttaacaaatttttgacttatatttttaagacataa 28646707  T

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Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 23247756 - 23247820
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||| |||||| |||||||||| ||||| |||| ||||||||||||||| ||| |||||    
T  23247756 ttttgcattggaaattgaacggttataacttcaacaagtgtttgacttatattttcaaggcataa 23247820  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 28514727 - 28514663
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||| ||||||||||||||||| || || |||| ||||||||||||||| ||| |||||    
T  28514727 ttttgcattggaaattgtacggttataacttgaacaagtgtttgacttatattttcaaggcataa 28514663  T

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Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 37869747 - 37869811
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||| ||||||||||||||| | || || |||| |||||||||||||||||| ||||||    
T  37869747 ttttgcattgaaaattgtacggttatgactttaacaagtgtttgacttatatttttaaaacataa 37869811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 19086395 - 19086330
Alignment:
Q  78 tttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    ||||||| ||| |||||||||||| |||| ||||| |||| ||||||||||||||| ||| |||||    
T  19086395 tttttgctttggaaattgtacggtaataacttcaacaagtgtttgacttatattttcaaggcataa 19086330  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 10625035 - 10624971
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||| ||||||||||||||| | |  ||||||| |||||||| |||||| |||||||||    
T  10625035 ttttgcattgaaaattgtacggttatgactataataagtgtttgacttgtattttcaagacataa 10624971  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 45618475 - 45618539
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||| ||||||||| ||| | | || ||||| ||||||||||||||||| |||||||||    
T  45618475 ttttgcattgaaaattgtaccgttgtgactttaataaatatttgacttatattttcaagacataa 45618539  T

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Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 34503216 - 34503153
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacata 142  Q
    ||||| |||| |||||||||  |||||||||||| |||| ||||| ||||||||| ||||||||    
T  34503216 ttttgaattgaaaattgtactattataatttcaacaagtgtttgatttatattttcaagacata 34503153  T

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Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 31191461 - 31191397
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||| ||||| |||||| |||||||||| || || |||| ||||||||||||||| ||| |||||    
T  31191461 ttttacattggaaattgcacggttataactttaacaagtgtttgacttatattttcaaggcataa 31191397  T

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Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 32147870 - 32147961
Alignment:
Q  54 attgtttaagcatataaaacta--actttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    ||||||||||||||||||| ||  | ||||||||||| ||||||||||||||| | || ||||| ||||||| || |||||| || ||||||    
T  32147870 attgtttaagcatataaaagtagtaatttttgcattgcaaattgtacggttatgactttaataaatatttgatttgtattttcaaaacataa 32147961  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 13984272 - 13984329
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaa 136  Q
    |||| ||||| |||| |||||||||||| |||||||| | ||||||||||||||||||    
T  13984272 ttttacattggaaatcgtacggttataacttcaataaatgtttgacttatatttttaa 13984329  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 5892694 - 5892758
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    ||||| |||| ||||| ||||||||| | || ||||||| |||||||| ||||||||||| ||||    
T  5892694 ttttggattggaaattatacggttatgactttaataagtgtttgacttgtatttttaagatataa 5892758  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 36563940 - 36563876
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||| ||||| ||||||||||| ||||| || || |||| ||||||||||||||| ||| |||||    
T  36563940 ttttacattgaaaattgtacggatataactttaacaagtgtttgacttatattttcaaggcataa 36563876  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 10285009 - 10285059
Alignment:
Q  79 ttttgcattgtaaattgtacggttataatttcaataagtatttgacttata 129  Q
    ||||| |||| ||||||||||||||||| ||||| || |||||||||||||    
T  10285009 ttttgtattggaaattgtacggttataacttcaacaaatatttgacttata 10285059  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 34339022 - 34338930
Alignment:
Q  53 tattgtttaagcatataaaactaact--ttttgcattgtaaattgtacggttataatttcaataagtatttgacttatatttttaagacataa 143  Q
    |||||||||||||| ||||| || |   |||||||||| ||| |||  |||||||| ||||| |||| ||||||||||||||| ||| |||||    
T  34339022 tattgtttaagcatctaaaaatagcaacttttgcattggaaagtgtgtggttataacttcaacaagtgtttgacttatattttcaaggcataa 34338930  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 14663056 - 14663012
Alignment:
Q  92 attgtacggttataatttcaataagtatttgacttatatttttaa 136  Q
    ||||| ||||||||| ||||| |||| ||||||||||||||||||    
T  14663056 attgtgcggttataacttcaacaagtgtttgacttatatttttaa 14663012  T

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