View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18689_high_14 (Length: 356)

Name: NF18689_high_14
Description: NF18689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18689_high_14
NF18689_high_14
[»] chr2 (7 HSPs)
chr2 (208-312)||(23465776-23465880)
chr2 (222-278)||(33710560-33710616)
chr2 (211-310)||(30481636-30481735)
chr2 (212-271)||(7152082-7152141)
chr2 (211-303)||(12670725-12670817)
chr2 (210-242)||(15538954-15538986)
chr2 (234-298)||(18694422-18694486)
[»] chr7 (5 HSPs)
chr7 (210-303)||(16780796-16780889)
chr7 (222-299)||(31726687-31726764)
chr7 (226-288)||(101254-101316)
chr7 (226-288)||(42094294-42094356)
chr7 (213-245)||(11754722-11754754)
[»] chr4 (4 HSPs)
chr4 (210-278)||(43115575-43115643)
chr4 (231-312)||(7379509-7379590)
chr4 (231-312)||(40423254-40423335)
chr4 (210-272)||(40423347-40423409)
[»] chr5 (6 HSPs)
chr5 (215-278)||(9962954-9963017)
chr5 (212-276)||(18398597-18398661)
chr5 (210-310)||(35943570-35943670)
chr5 (231-312)||(42479957-42480038)
chr5 (226-310)||(23311817-23311901)
chr5 (210-272)||(35895008-35895070)
[»] chr1 (5 HSPs)
chr1 (226-312)||(34123113-34123199)
chr1 (210-273)||(34062636-34062699)
chr1 (210-310)||(8041072-8041172)
chr1 (227-276)||(31847382-31847431)
chr1 (232-276)||(39126966-39127010)
[»] chr3 (4 HSPs)
chr3 (226-276)||(50670071-50670121)
chr3 (210-309)||(37059015-37059114)
chr3 (212-242)||(24498251-24498281)
chr3 (214-310)||(15513408-15513504)
[»] chr8 (8 HSPs)
chr8 (210-310)||(34273163-34273263)
chr8 (212-244)||(38202007-38202039)
chr8 (210-288)||(10340192-10340271)
chr8 (210-272)||(559943-560005)
chr8 (226-276)||(21150241-21150291)
chr8 (230-280)||(29204666-29204716)
chr8 (226-287)||(37616263-37616324)
chr8 (210-242)||(38924418-38924450)
[»] chr6 (1 HSPs)
chr6 (226-271)||(2424562-2424607)


Alignment Details
Target: chr2 (Bit Score: 89; Significance: 8e-43; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 23465776 - 23465880
Alignment:
Q  208 ttacttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaa 307  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  23465776 ttacttaaaaagtaattgaaccgatcttaaaagtgtcatcgtaagttaacttacgctgaaaaatgccgagcatgagttaacctacgttgaattaagagaa 23465875  T
Q  308 tgaac 312  Q
    |||||    
T  23465876 tgaac 23465880  T

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Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 33710616 - 33710560
Alignment:
Q  222 attgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaac 278  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  33710616 attgaaccgatcttaaaagtgtcagcgtaagttaactcacgctgaaaaatgtcgaac 33710560  T

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Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 30481735 - 30481636
Alignment:
Q  211 cttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaatga 310  Q
    |||||||| | ||||||| ||||||||||||| ||  || |||||||| ||||| ||||||||||||||||| |||||   || ||||||||||||||||    
T  30481735 cttaaaaaattattgaactgatcttaaaagtgccagtgtgagttaactcacgctaaaaaatgtcgaacatgagttaactcgcgatgaattaagagaatga 30481636  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 7152141 - 7152082
Alignment:
Q  212 ttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaat 271  Q
    ||||||||||||||||||||| |||||||||| |  || |||||||| ||||||||||||    
T  7152141 ttaaaaagtaattgaaccgatattaaaagtgttaacgtgagttaactcacgctgaaaaat 7152082  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 303
Target Start/End: Complemental strand, 12670817 - 12670725
Alignment:
Q  211 cttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaag 303  Q
    |||||||| | ||||||||||||||||||||||||  || |||||| | ||| || |||||||||||  ||| |||||  ||| |||||||||    
T  12670817 cttaaaaattgattgaaccgatcttaaaagtgtcagcgtgagttaagtcacgttgcaaaatgtcgaatgtgagttaactcacgctgaattaag 12670725  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 15538986 - 15538954
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtg 242  Q
    |||||||||||||||||||||||||||||||||    
T  15538986 acttaaaaagtaattgaaccgatcttaaaagtg 15538954  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 18694486 - 18694422
Alignment:
Q  234 ttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaa 298  Q
    |||||||||||   || |||||||| ||||||||||||||| | ||||| |||||| ||||||||    
T  18694486 ttaaaagtgtctgcgtgagttaactcacgctgaaaaatgtccagcatgagttaacccacgttgaa 18694422  T

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Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 303
Target Start/End: Original strand, 16780796 - 16780889
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaag 303  Q
    ||||||||||| ||||||||||||||||||||| |   ||||||||||| | ||||||||||||||| ||||| |||||  | |||||||||||    
T  16780796 acttaaaaagtgattgaaccgatcttaaaagtgcccgcgtaagttaactcatgctgaaaaatgtcgagcatgagttaactcatgttgaattaag 16780889  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 31726687 - 31726764
Alignment:
Q  222 attgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaat 299  Q
    |||||||||| ||||||||||| |  ||||||||||||| ||||||||||||||| | ||| |||||  |||||||||    
T  31726687 attgaaccgaacttaaaagtgttagtgtaagttaacttatgctgaaaaatgtcgagcgtgagttaactcacgttgaat 31726764  T

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Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 101316 - 101254
Alignment:
Q  226 aaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaac 288  Q
    ||||||||||||||||||||  || ||||||||  |||||||||||| ||| ||||| |||||    
T  101316 aaccgatcttaaaagtgtcagcgtgagttaactaccgctgaaaaatgccgagcatgagttaac 101254  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 42094356 - 42094294
Alignment:
Q  226 aaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaac 288  Q
    ||||| ||||||||||||||  || |||||||  | ||||||||||||| |||||||||||||    
T  42094356 aaccggtcttaaaagtgtcaacgtgagttaacccatgctgaaaaatgtcaaacatgaattaac 42094294  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 11754722 - 11754754
Alignment:
Q  213 taaaaagtaattgaaccgatcttaaaagtgtca 245  Q
    |||||||| ||||||||||||||||||||||||    
T  11754722 taaaaagtgattgaaccgatcttaaaagtgtca 11754754  T

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Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 43115643 - 43115575
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaac 278  Q
    ||||||||| | ||||||||||||||||||||||||  || |||||||| |||||||||||||||||||    
T  43115643 acttaaaaaattattgaaccgatcttaaaagtgtcagtgtgagttaactcacgctgaaaaatgtcgaac 43115575  T

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Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 7379509 - 7379590
Alignment:
Q  231 atcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaatgaac 312  Q
    |||||||||||||||   |  ||||||||| ||||||||||||||| | |||||||||  ||| |||||||| |||||||||    
T  7379509 atcttaaaagtgtcagcatgggttaacttatgctgaaaaatgtcgagcgtgaattaactcacgctgaattaaaagaatgaac 7379590  T

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Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 40423335 - 40423254
Alignment:
Q  231 atcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaatgaac 312  Q
    |||||||||||||||   | ||||||||| || ||||||||||| | | ||| ||||| |||| ||||||||||||||||||    
T  40423335 atcttaaaagtgtcagcatgagttaacttccgttgaaaaatgtcaagcgtgagttaacatacgctgaattaagagaatgaac 40423254  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 40423347 - 40423409
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatg 272  Q
    ||||||||||| |||||||||||||||||| |||||  || |||||| | ||||| |||||||    
T  40423347 acttaaaaagtgattgaaccgatcttaaaattgtcagcgtgagttaattcacgcttaaaaatg 40423409  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 9962954 - 9963017
Alignment:
Q  215 aaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaac 278  Q
    |||||| |||||| | |||||||||||||||| || |||||||||||||||||||||| |||||    
T  9962954 aaaagtgattgaatcaatcttaaaagtgtcattgtgagttaacttacgctgaaaaatgccgaac 9963017  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 18398597 - 18398661
Alignment:
Q  212 ttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcga 276  Q
    ||||||||| | ||||||||||||||||||||||  ||||||||||| ||| |||||||| ||||    
T  18398597 ttaaaaagtgaatgaaccgatcttaaaagtgtcagtgtaagttaactcacgttgaaaaatatcga 18398661  T

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Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 310
Target Start/End: Original strand, 35943570 - 35943670
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaatg 309  Q
    ||||||||| |||||||||||||||||||||||  |  || | ||||||||| ||||||||||||||   |||||||||  |||  |||||||| |||||    
T  35943570 acttaaaaaataattgaaccgatcttaaaagtgctagtgtgaattaacttacactgaaaaatgtcgagtgtgaattaactcacgcggaattaagggaatg 35943669  T
Q  310 a 310  Q
    |    
T  35943670 a 35943670  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 42480038 - 42479957
Alignment:
Q  231 atcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaatgaac 312  Q
    |||||||||||||||  || |||| ||||| ||||||||||||||| | |||||||||||  | |||  |||||||||||||    
T  42480038 atcttaaaagtgtcactgtgagttgacttatgctgaaaaatgtcgagcgtgaattaacctctgctgagataagagaatgaac 42479957  T

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Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 310
Target Start/End: Original strand, 23311817 - 23311901
Alignment:
Q  226 aaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaatga 310  Q
    |||| |||||||||||||||  || |||||||||||| | |||||| |||| | ||| ||||  |||| ||||||||||||||||    
T  23311817 aaccaatcttaaaagtgtcaacgtgagttaacttacgttaaaaaatatcgagcttgagttaatttacgctgaattaagagaatga 23311901  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 35895070 - 35895008
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatg 272  Q
    ||||||||||||||| ||| ||||| ||||||||||  |||||||| ||  ||||||||||||    
T  35895070 acttaaaaagtaatttaactgatctaaaaagtgtcagcgtaagttacctaccgctgaaaaatg 35895008  T

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Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 34123199 - 34123113
Alignment:
Q  226 aaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaatgaac 312  Q
    ||||||| ||||||||||||  || ||||||||| |||||||||||||||| | ||| |||||| ||||| ||||||  ||||||||    
T  34123199 aaccgattttaaaagtgtcagcgtgagttaacttccgctgaaaaatgtcgagcgtgagttaacccacgttaaattaaaggaatgaac 34123113  T

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Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 34062699 - 34062636
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgt 273  Q
    ||||||||||| ||||||||||| ||||||||||||  || |||| ||| ||||||||||||||    
T  34062699 acttaaaaagtgattgaaccgattttaaaagtgtcagcgtgagttcactcacgctgaaaaatgt 34062636  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 310
Target Start/End: Complemental strand, 8041172 - 8041072
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaatg 309  Q
    ||||||||| | |||||||||||||||||| ||  |  ||| ||||| | ||||||||||||||||| | ||| |||||  ||| |||||||||| ||||    
T  8041172 acttaaaaattgattgaaccgatcttaaaaatgctagtgtaggttaattcacgctgaaaaatgtcgagcgtgagttaactcacgctgaattaagaaaatg 8041073  T
Q  310 a 310  Q
    |    
T  8041072 a 8041072  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 31847431 - 31847382
Alignment:
Q  227 accgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcga 276  Q
    |||||||||||||||||||  |  |||||||| |||||||||||||||||    
T  31847431 accgatcttaaaagtgtcagcgagagttaactcacgctgaaaaatgtcga 31847382  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 39126966 - 39127010
Alignment:
Q  232 tcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcga 276  Q
    ||||||||||||||  || |||||||| |||||||||||||||||    
T  39126966 tcttaaaagtgtcagcgtgagttaactcacgctgaaaaatgtcga 39127010  T

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Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 50670121 - 50670071
Alignment:
Q  226 aaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcga 276  Q
    ||||||| ||||||||||||  ||||||||||| |||||||||||||||||    
T  50670121 aaccgattttaaaagtgtcagcgtaagttaactcacgctgaaaaatgtcga 50670071  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 309
Target Start/End: Original strand, 37059015 - 37059114
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaatg 309  Q
    ||||||||| | |||||| ||||||||||| ||| | ||| ||||||||| || | ||||||||||| | | | ||||| |||||| |||||||| ||||    
T  37059015 acttaaaaaatgattgaatcgatcttaaaaatgttaaagtgagttaacttccgttaaaaaatgtcgagcgtaagttaacttacgttaaattaagataatg 37059114  T

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Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 24498251 - 24498281
Alignment:
Q  212 ttaaaaagtaattgaaccgatcttaaaagtg 242  Q
    |||||||||||||||||||||||||||||||    
T  24498251 ttaaaaagtaattgaaccgatcttaaaagtg 24498281  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 310
Target Start/End: Complemental strand, 15513504 - 15513408
Alignment:
Q  214 aaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaatga 310  Q
    ||||||| |||||  | ||||||||||||||   || |||||| | ||| ||||||||||||||| ||| |||||  |||  |||||||||||||||    
T  15513504 aaaaagtgattgagtcaatcttaaaagtgtcggtgtgagttaattcacgttgaaaaatgtcgaacgtgagttaactcacgcagaattaagagaatga 15513408  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 310
Target Start/End: Original strand, 34273163 - 34273263
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaacctacgttgaattaagagaatg 309  Q
    ||||||| ||| ||||||||||||||||||||   |  || |||||||| | ||||||||||| ||| ||||| | |||  ||||||||||||| |||||    
T  34273163 acttaaacagtgattgaaccgatcttaaaagtactagtgtgagttaactaatgctgaaaaatgccgagcatgagtaaactcacgttgaattaagggaatg 34273262  T
Q  310 a 310  Q
    |    
T  34273263 a 34273263  T

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Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 38202039 - 38202007
Alignment:
Q  212 ttaaaaagtaattgaaccgatcttaaaagtgtc 244  Q
    |||||||||||||||||||||||||||||||||    
T  38202039 ttaaaaagtaattgaaccgatcttaaaagtgtc 38202007  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 10340271 - 10340192
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctga-aaaatgtcgaacatgaattaac 288  Q
    ||||||||| | |||||| |||||| ||||||||||  || |||||||| ||||||| ||||||| |||||||| |||||    
T  10340271 acttaaaaaatgattgaatcgatctaaaaagtgtcagtgtgagttaactcacgctgaaaaaatgttgaacatgagttaac 10340192  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 560005 - 559943
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatg 272  Q
    ||||||||| |||||||| || |||||||| |||||  || |||||||| |||||||||||||    
T  560005 acttaaaaaataattgaatcggtcttaaaaatgtcagcgtgagttaactcacgctgaaaaatg 559943  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 21150241 - 21150291
Alignment:
Q  226 aaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcga 276  Q
    ||||||||||||||||||||  ||||||||||| ||| |||||||| ||||    
T  21150241 aaccgatcttaaaagtgtcagcgtaagttaactcacgttgaaaaatatcga 21150291  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 29204666 - 29204716
Alignment:
Q  230 gatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacat 280  Q
    ||||||||||||| ||  ||||||||||||||||||||||||  |||||||    
T  29204666 gatcttaaaagtgacagcgtaagttaacttacgctgaaaaataccgaacat 29204716  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 37616324 - 37616263
Alignment:
Q  226 aaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaatgtcgaacatgaattaa 287  Q
    |||| |||||||||||||||  || |||||||  ||||||||||||||||||| ||| ||||    
T  37616324 aaccaatcttaaaagtgtcagcgtgagttaacccacgctgaaaaatgtcgaacgtgagttaa 37616263  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 38924450 - 38924418
Alignment:
Q  210 acttaaaaagtaattgaaccgatcttaaaagtg 242  Q
    ||||||||||| |||||||||||||||||||||    
T  38924450 acttaaaaagtgattgaaccgatcttaaaagtg 38924418  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 2424562 - 2424607
Alignment:
Q  226 aaccgatcttaaaagtgtcatagtaagttaacttacgctgaaaaat 271  Q
    |||||||||||||||||| |  |||||||||||| |||||||||||    
T  2424562 aaccgatcttaaaagtgttagcgtaagttaacttccgctgaaaaat 2424607  T

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