View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18689_high_31 (Length: 203)
Name: NF18689_high_31
Description: NF18689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18689_high_31 |
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Alignment Details
Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 22233425 - 22233602
Alignment:
| Q |
10 |
catcatcatgtatcccgaaccgcgtcacagtctcattcgttactagaaactgtgttatagctactaaaccatcccttcctattcttgttctccctccccc |
109 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22233425 |
catcatcatgtatcccgaaccgcgtcaccgtctcattcgttactaaaaactgtgttatagctactaaaccatcccttcctattcttgttctccctccccc |
22233524 |
T |
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| Q |
110 |
caaagtaacacatttcaaactagtgttagcttgcatctgcaatgatgaaaatctactcaaaggacaaagtaaatgctc |
187 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |
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| T |
22233525 |
caaagtaacacatttcaaactagtgttagcttgcatttgcaatgatgaaaatctactcagaggacaaagtaaatgctc |
22233602 |
T |
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