View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18689_low_24 (Length: 284)

Name: NF18689_low_24
Description: NF18689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18689_low_24
NF18689_low_24
[»] chr3 (41 HSPs)
chr3 (1-272)||(13018566-13018838)
chr3 (1-48)||(11436506-11436553)
chr3 (1-47)||(4200606-4200652)
chr3 (2-52)||(25488883-25488933)
chr3 (2-52)||(34579472-34579522)
chr3 (1-51)||(49194713-49194763)
chr3 (1-50)||(25638410-25638459)
chr3 (1-50)||(53163594-53163643)
chr3 (4-52)||(12894554-12894602)
chr3 (7-50)||(2007110-2007153)
chr3 (7-50)||(10482880-10482923)
chr3 (1-48)||(17602697-17602744)
chr3 (3-42)||(19591602-19591641)
chr3 (7-50)||(28689699-28689742)
chr3 (1-52)||(29373470-29373521)
chr3 (1-48)||(49750427-49750474)
chr3 (7-50)||(52974080-52974123)
chr3 (7-53)||(9176613-9176659)
chr3 (2-48)||(11250613-11250659)
chr3 (4-42)||(29559698-29559736)
chr3 (1-51)||(47098731-47098781)
chr3 (1-50)||(1743818-1743867)
chr3 (1-50)||(17608340-17608389)
chr3 (1-50)||(19999867-19999916)
chr3 (1-50)||(22501952-22502001)
chr3 (1-50)||(28550340-28550389)
chr3 (1-50)||(29098692-29098741)
chr3 (1-50)||(34847543-34847592)
chr3 (1-50)||(39966095-39966144)
chr3 (1-50)||(40963732-40963781)
chr3 (1-42)||(44106610-44106651)
chr3 (8-53)||(47495957-47496002)
chr3 (2-51)||(48546172-48546221)
chr3 (1-50)||(51467176-51467225)
chr3 (1-50)||(52945895-52945944)
chr3 (1-50)||(53752721-53752770)
chr3 (7-51)||(4138999-4139043)
chr3 (3-47)||(21356867-21356911)
chr3 (7-47)||(48251575-48251615)
chr3 (2-50)||(53347312-53347360)
chr3 (1-41)||(53432758-53432798)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-51)||(50022-50072)
[»] chr4 (48 HSPs)
chr4 (5-52)||(18424922-18424969)
chr4 (1-48)||(19594235-19594282)
chr4 (1-52)||(39697883-39697934)
chr4 (1-52)||(42381134-42381185)
chr4 (1-48)||(56479247-56479294)
chr4 (7-49)||(35207178-35207220)
chr4 (7-49)||(53572354-53572396)
chr4 (1-50)||(3036076-3036125)
chr4 (1-50)||(3157238-3157287)
chr4 (1-50)||(11375910-11375959)
chr4 (7-56)||(22230461-22230510)
chr4 (1-50)||(40051622-40051671)
chr4 (3-52)||(40994126-40994175)
chr4 (1-50)||(42218750-42218799)
chr4 (7-47)||(12167643-12167683)
chr4 (1-49)||(13578486-13578534)
chr4 (7-51)||(42231511-42231555)
chr4 (2-50)||(45673652-45673700)
chr4 (1-41)||(54103585-54103625)
chr4 (7-50)||(4234312-4234355)
chr4 (7-50)||(5179909-5179952)
chr4 (1-48)||(7272519-7272566)
chr4 (7-50)||(52798278-52798321)
chr4 (1-51)||(22788695-22788745)
chr4 (1-51)||(43978007-43978057)
chr4 (7-53)||(48615499-48615545)
chr4 (1-50)||(4357882-4357931)
chr4 (1-50)||(5165857-5165906)
chr4 (1-50)||(8965094-8965143)
chr4 (1-50)||(10402441-10402490)
chr4 (1-50)||(24680107-24680156)
chr4 (1-50)||(31852634-31852683)
chr4 (1-50)||(37935861-37935910)
chr4 (1-50)||(39023175-39023224)
chr4 (3-48)||(39696360-39696405)
chr4 (1-50)||(48569197-48569246)
chr4 (6-47)||(49022965-49023006)
chr4 (1-50)||(49901482-49901531)
chr4 (8-41)||(52699198-52699231)
chr4 (1-50)||(56360733-56360782)
chr4 (1-49)||(542835-542883)
chr4 (7-51)||(4105726-4105770)
chr4 (2-50)||(4931890-4931938)
chr4 (1-49)||(8282343-8282391)
chr4 (1-53)||(27743729-27743781)
chr4 (1-49)||(30217600-30217648)
chr4 (1-41)||(37310036-37310076)
chr4 (1-49)||(40123170-40123218)
[»] scaffold0330 (1 HSPs)
scaffold0330 (3-49)||(6769-6815)
[»] chr5 (27 HSPs)
chr5 (1-51)||(41930104-41930154)
chr5 (1-50)||(5900292-5900341)
chr5 (1-50)||(11188703-11188752)
chr5 (1-50)||(12891557-12891606)
chr5 (1-50)||(15241396-15241445)
chr5 (1-50)||(26912833-26912882)
chr5 (7-52)||(43580876-43580921)
chr5 (1-49)||(546803-546851)
chr5 (1-49)||(10241726-10241774)
chr5 (1-49)||(36124400-36124448)
chr5 (1-45)||(38030957-38031001)
chr5 (1-48)||(2362971-2363018)
chr5 (7-50)||(40091477-40091520)
chr5 (5-47)||(4153550-4153592)
chr5 (2-48)||(6414070-6414116)
chr5 (1-51)||(17666005-17666055)
chr5 (1-51)||(35112983-35113033)
chr5 (1-50)||(11146550-11146599)
chr5 (1-50)||(17545193-17545242)
chr5 (1-50)||(32423565-32423614)
chr5 (1-42)||(33736035-33736076)
chr5 (7-52)||(38696689-38696734)
chr5 (1-49)||(11786081-11786129)
chr5 (7-50)||(11815636-11815680)
chr5 (1-49)||(28684921-28684969)
chr5 (7-51)||(35515511-35515555)
chr5 (8-52)||(42158880-42158924)
[»] chr8 (46 HSPs)
chr8 (1-50)||(7388455-7388504)
chr8 (1-53)||(37290919-37290971)
chr8 (3-50)||(42880948-42880995)
chr8 (1-50)||(2792779-2792828)
chr8 (1-50)||(8034433-8034482)
chr8 (1-50)||(33617972-33618021)
chr8 (1-42)||(40740533-40740574)
chr8 (1-50)||(43656036-43656085)
chr8 (1-49)||(10083164-10083212)
chr8 (7-51)||(34472296-34472340)
chr8 (7-50)||(133415-133458)
chr8 (1-48)||(8698601-8698648)
chr8 (1-52)||(23339917-23339968)
chr8 (7-50)||(26567275-26567318)
chr8 (7-50)||(37717363-37717406)
chr8 (1-48)||(41458297-41458344)
chr8 (7-49)||(13406601-13406643)
chr8 (7-49)||(16432155-16432197)
chr8 (7-49)||(31450984-31451026)
chr8 (1-50)||(12246-12295)
chr8 (1-50)||(8265268-8265317)
chr8 (1-46)||(11710288-11710333)
chr8 (1-50)||(16449125-16449174)
chr8 (1-50)||(17072584-17072633)
chr8 (1-50)||(17575638-17575687)
chr8 (1-50)||(20540127-20540176)
chr8 (1-50)||(23178912-23178961)
chr8 (1-50)||(26022247-26022296)
chr8 (1-50)||(26395364-26395413)
chr8 (2-51)||(29499577-29499626)
chr8 (1-50)||(35939487-35939536)
chr8 (1-50)||(36540287-36540336)
chr8 (2-51)||(38337049-38337098)
chr8 (7-48)||(38344051-38344092)
chr8 (1-50)||(38402251-38402300)
chr8 (1-50)||(38955215-38955264)
chr8 (1-50)||(41689882-41689931)
chr8 (1-50)||(43856403-43856452)
chr8 (7-47)||(7671388-7671428)
chr8 (8-48)||(11127905-11127945)
chr8 (7-47)||(19163866-19163906)
chr8 (7-47)||(23435260-23435300)
chr8 (1-49)||(23858198-23858246)
chr8 (8-48)||(28460203-28460243)
chr8 (2-50)||(32719629-32719677)
chr8 (7-51)||(34158684-34158728)
[»] chr7 (39 HSPs)
chr7 (1-50)||(3392467-3392516)
chr7 (1-50)||(27704320-27704369)
chr7 (5-51)||(18223742-18223788)
chr7 (1-42)||(12615759-12615800)
chr7 (1-50)||(37300120-37300169)
chr7 (1-50)||(38889514-38889563)
chr7 (1-50)||(47641045-47641094)
chr7 (1-49)||(2846081-2846129)
chr7 (1-49)||(9712219-9712267)
chr7 (7-51)||(43624471-43624515)
chr7 (7-50)||(3766811-3766854)
chr7 (3-50)||(10244912-10244959)
chr7 (1-52)||(24062032-24062083)
chr7 (12-51)||(29281375-29281414)
chr7 (3-50)||(32619350-32619397)
chr7 (3-50)||(47999780-47999827)
chr7 (7-53)||(34267578-34267624)
chr7 (7-49)||(48288428-48288470)
chr7 (1-50)||(2228975-2229024)
chr7 (1-50)||(9877288-9877337)
chr7 (1-50)||(15238889-15238938)
chr7 (1-50)||(19752989-19753038)
chr7 (1-50)||(21066886-21066935)
chr7 (1-50)||(21762913-21762962)
chr7 (1-50)||(23102579-23102628)
chr7 (1-50)||(25833555-25833604)
chr7 (7-48)||(28479355-28479396)
chr7 (7-48)||(29625923-29625964)
chr7 (1-50)||(40518910-40518959)
chr7 (1-46)||(42548049-42548094)
chr7 (1-49)||(12264055-12264103)
chr7 (7-47)||(15106718-15106758)
chr7 (7-51)||(24781029-24781073)
chr7 (7-51)||(27510284-27510328)
chr7 (1-49)||(38824646-38824694)
chr7 (1-49)||(41084040-41084088)
chr7 (1-49)||(42182219-42182267)
chr7 (7-51)||(44593509-44593553)
chr7 (1-49)||(47287885-47287933)
[»] scaffold0038 (2 HSPs)
scaffold0038 (7-51)||(23360-23404)
scaffold0038 (7-48)||(37441-37482)
[»] chr6 (22 HSPs)
chr6 (3-51)||(27218883-27218931)
chr6 (7-51)||(28222862-28222906)
chr6 (1-50)||(6210054-6210103)
chr6 (1-50)||(27094828-27094877)
chr6 (1-50)||(33697134-33697183)
chr6 (1-52)||(8439673-8439724)
chr6 (7-50)||(9704417-9704460)
chr6 (7-50)||(13732812-13732855)
chr6 (7-50)||(31802053-31802096)
chr6 (1-50)||(4408358-4408407)
chr6 (1-50)||(7545329-7545378)
chr6 (1-50)||(7865376-7865425)
chr6 (1-50)||(9372222-9372271)
chr6 (1-50)||(9435626-9435675)
chr6 (1-50)||(15091448-15091497)
chr6 (1-50)||(19892297-19892346)
chr6 (7-48)||(28237279-28237320)
chr6 (7-47)||(361166-361206)
chr6 (1-49)||(3294765-3294813)
chr6 (1-49)||(22997337-22997385)
chr6 (1-49)||(23791016-23791064)
chr6 (7-51)||(32049992-32050036)
[»] chr2 (28 HSPs)
chr2 (1-49)||(40363092-40363140)
chr2 (1-51)||(9330522-9330572)
chr2 (5-47)||(33222179-33222221)
chr2 (1-50)||(5062297-5062346)
chr2 (1-50)||(5521241-5521290)
chr2 (1-50)||(33669736-33669785)
chr2 (1-49)||(17601080-17601128)
chr2 (5-41)||(18559238-18559274)
chr2 (4-47)||(32168931-32168974)
chr2 (7-50)||(39408717-39408760)
chr2 (1-51)||(2806522-2806572)
chr2 (7-49)||(17487705-17487747)
chr2 (7-49)||(32609214-32609256)
chr2 (1-50)||(2289610-2289659)
chr2 (1-50)||(8250322-8250371)
chr2 (1-50)||(33228954-33229003)
chr2 (1-50)||(33563230-33563279)
chr2 (1-50)||(34613979-34614028)
chr2 (1-50)||(35798047-35798096)
chr2 (1-50)||(38400310-38400359)
chr2 (1-50)||(41566762-41566811)
chr2 (1-50)||(43214356-43214405)
chr2 (3-51)||(19612714-19612762)
chr2 (7-51)||(20898080-20898124)
chr2 (1-49)||(29772299-29772347)
chr2 (1-41)||(37352514-37352554)
chr2 (9-49)||(43842123-43842163)
chr2 (2-50)||(44948596-44948644)
[»] chr1 (32 HSPs)
chr1 (7-49)||(46867881-46867923)
chr1 (2-48)||(47478870-47478916)
chr1 (1-50)||(42054333-42054382)
chr1 (1-49)||(1604245-1604292)
chr1 (1-49)||(7191033-7191081)
chr1 (2-50)||(48607771-48607819)
chr1 (1-49)||(52426934-52426982)
chr1 (1-48)||(621579-621626)
chr1 (1-52)||(9866205-9866256)
chr1 (2-49)||(28867480-28867527)
chr1 (7-50)||(44732633-44732676)
chr1 (2-48)||(14349646-14349692)
chr1 (1-51)||(15390219-15390269)
chr1 (1-51)||(25034903-25034953)
chr1 (1-50)||(3269619-3269668)
chr1 (1-50)||(4553567-4553616)
chr1 (1-50)||(7166248-7166297)
chr1 (1-50)||(8865854-8865903)
chr1 (1-50)||(11081237-11081285)
chr1 (1-50)||(21265656-21265705)
chr1 (1-50)||(22563386-22563435)
chr1 (1-50)||(27579495-27579544)
chr1 (1-50)||(33207205-33207254)
chr1 (1-50)||(35605644-35605693)
chr1 (1-50)||(42490431-42490480)
chr1 (1-50)||(48897138-48897187)
chr1 (1-49)||(11215002-11215050)
chr1 (7-51)||(15775738-15775782)
chr1 (1-41)||(26606693-26606733)
chr1 (1-41)||(40634210-40634250)
chr1 (7-51)||(42848758-42848802)
chr1 (8-44)||(51942301-51942337)
[»] scaffold1787 (1 HSPs)
scaffold1787 (1-50)||(400-449)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-50)||(17282-17331)
[»] scaffold0690 (1 HSPs)
scaffold0690 (7-51)||(3665-3709)
[»] scaffold0028 (1 HSPs)
scaffold0028 (7-50)||(112108-112151)
[»] scaffold0113 (1 HSPs)
scaffold0113 (7-49)||(37075-37117)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-47)||(65808-65854)
[»] scaffold0179 (1 HSPs)
scaffold0179 (1-50)||(5982-6031)
[»] scaffold0121 (2 HSPs)
scaffold0121 (7-48)||(11996-12037)
scaffold0121 (1-50)||(46526-46575)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-50)||(10847-10896)
[»] scaffold0394 (1 HSPs)
scaffold0394 (7-51)||(1261-1305)
[»] scaffold0366 (1 HSPs)
scaffold0366 (7-51)||(887-931)
[»] scaffold0254 (1 HSPs)
scaffold0254 (7-51)||(1316-1360)
[»] scaffold0014 (1 HSPs)
scaffold0014 (7-51)||(12288-12332)


Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 13018838 - 13018566
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg-attgaatagcaatatgttaatacgtggttttgagcaccgactgtagatc 99  Q
    ||||| |||||||||||||||||  |||||||||||  |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13018838 cccctgcatataatatgcaatatctctatcaactgaactaagttcaaggggattgaatagcaatatgttaatacgtcgttttgagcaccgactgtagatc 13018739  T
Q  100 aatgtatcagcaagttcgagaagatgaatagttaaaaaataatgtctgataaaacagactaattattaaaaggtttaatttataatacatgaagtggcac 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13018738 aatgtatcagcaagttcgagaagatgaatagttaaaaaataatgtctgataaaacagactaattattaaaaggtttaatttataatacatgaagtggcac 13018639  T
Q  200 gcagagagcatatgcaaagatcgtattatatctttgttggaccctctcagggttgatttctttttcttatttt 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13018638 gcagagagcatatgcaaagatcgtattatatctttgttggaccctctcagggttgatttcttttacttatttt 13018566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11436553 - 11436506
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  11436553 cccctgcatataatatgcaatatccctaccaactgagttaagttcacg 11436506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4200606 - 4200652
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcac 47  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  4200606 cccctgcatataatatgcaatatccctaccaactgagttaagttcac 4200652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 25488933 - 25488883
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    |||||||||||||||| ||||| |||| ||||||||||||| |||||||||    
T  25488933 ccctacatataatatgtaatatccctaacaactgagttaagctcacgggat 25488883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 34579472 - 34579522
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    |||||||||||| || |||||| |||||||||||||||||| |||||||||    
T  34579472 ccctacatataaaattcaatatccctatcaactgagttaagctcacgggat 34579522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49194713 - 49194763
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||| ||||    
T  49194713 cccctacatataatatgcaatattcctaccaattgagttaagttcatggga 49194763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25638410 - 25638459
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||||||||||||||||||||||  ||| ||| |||||||||||||||||    
T  25638410 cccctacatataatatgcaatatctctaccaattgagttaagttcacggg 25638459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 53163643 - 53163594
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||||    
T  53163643 cccctacatataatatgcaatatccctaccaactgagctaagctcacggg 53163594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 12894554 - 12894602
Alignment:
Q  4 ctacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    |||||||||| ||||||||| |||| ||||||||||||| |||||||||    
T  12894554 ctacatataaaatgcaatatccctaccaactgagttaagctcacgggat 12894602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 2007110 - 2007153
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||||||||||||||||  ||| |||||||||||||||||||||    
T  2007110 catataatatgcaatatttctaccaactgagttaagttcacggg 2007153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 10482880 - 10482923
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||    
T  10482880 catataatatgcaatatccctaccaactgagctaagttcacggg 10482923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17602697 - 17602744
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||    
T  17602697 cccctacatataatatgcaatatccctaccaactgagctaagctcacg 17602744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 19591602 - 19591641
Alignment:
Q  3 cctacatataatatgcaatatacctatcaactgagttaag 42  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
T  19591602 cctacatataatatgcaatatacttatcaactgagctaag 19591641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 28689699 - 28689742
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||    
T  28689699 catataatatgcaatatccctaccaactgagctaagttcacggg 28689742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29373470 - 29373521
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    ||||| ||||||||||||||||| | || ||||||||||||| |||||||||    
T  29373470 cccctgcatataatatgcaatatccttaccaactgagttaagctcacgggat 29373521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 49750427 - 49750474
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| |||||    
T  49750427 cccctgcatataatatgcaatatccctatcaactgagctaagctcacg 49750474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 52974080 - 52974123
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  52974080 catataatatgcaatatccctaccaactgagttaagctcacggg 52974123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 9176613 - 9176659
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgggatt 53  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||||||    
T  9176613 catataatatgcaatatccctaccaactgagctaagctcacgggatt 9176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 11250613 - 11250659
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    |||| ||||||||||||||||| |||| |||||||| ||||||||||    
T  11250613 ccctgcatataatatgcaatatccctaccaactgagctaagttcacg 11250659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 29559698 - 29559736
Alignment:
Q  4 ctacatataatatgcaatatacctatcaactgagttaag 42  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  29559698 ctacatataatatgcaatatccctaccaactgagttaag 29559736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47098781 - 47098731
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| ||||||||    
T  47098781 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggga 47098731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1743818 - 1743867
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||| ||||||||| |||| ||| ||||||||| |||||||    
T  1743818 cccctacatataaaatgcaatatccctaccaattgagttaagctcacggg 1743867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17608340 - 17608389
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| ||||| ||||||| |||||||    
T  17608340 cccctgcatataatatgcaatatccctaccaactaagttaagctcacggg 17608389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19999916 - 19999867
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  19999916 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 19999867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22501952 - 22502001
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  22501952 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 22502001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28550340 - 28550389
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  28550340 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 28550389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29098741 - 29098692
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| |||||||||| ||||||  ||| |||||||||||||||||||||    
T  29098741 cccctgcatataatatacaatatctctaccaactgagttaagttcacggg 29098692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34847592 - 34847543
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| ||||||| ||||| |||||||    
T  34847592 cccctgcatataatatgcaatatccctaccaactgaattaagctcacggg 34847543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39966095 - 39966144
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  39966095 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 39966144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40963732 - 40963781
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||| ||||||||| | |||||||||||||||| |||||||    
T  40963732 cccctgcatataaaatgcaatatccttatcaactgagttaagctcacggg 40963781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44106651 - 44106610
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaag 42  Q
    ||||| ||||||||||||||||| |||| |||||||||||||    
T  44106651 cccctgcatataatatgcaatatccctagcaactgagttaag 44106610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 47496002 - 47495957
Alignment:
Q  8 atataatatgcaatatacctatcaactgagttaagttcacgggatt 53  Q
    |||||||||| |||||  ||| ||||||||||||||||||||||||    
T  47496002 atataatatgaaatatcactaccaactgagttaagttcacgggatt 47495957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 48546221 - 48546172
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||||||||  ||| |||||||| |||| ||||||||    
T  48546221 ccctacatataatatgcaatatcactaccaactgagctaagctcacggga 48546172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 51467225 - 51467176
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||| |||| |||| ||||||||||||| ||||||||||||    
T  51467225 cccctgcatataaaatgcgatatccctatcaactgagctaagttcacggg 51467176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52945944 - 52945895
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  52945944 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 52945895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 53752721 - 53752770
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| |||||||||||| |||| |||| ||||||||||||| |||||||    
T  53752721 cccctgcatataatatgccatatccctaccaactgagttaagctcacggg 53752770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 4139043 - 4138999
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||||    
T  4139043 catataatatgcaatatccctaccaactgagctaagctcacggga 4138999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 21356911 - 21356867
Alignment:
Q  3 cctacatataatatgcaatatacctatcaactgagttaagttcac 47  Q
    |||||||||| ||| ||||||| ||||||||||||||||| ||||    
T  21356911 cctacatatattatacaatatatctatcaactgagttaagctcac 21356867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 48251615 - 48251575
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcac 47  Q
    ||||||||||||||||| ||||||||||||| |||| ||||    
T  48251615 catataatatgcaatatccctatcaactgagctaagctcac 48251575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 53347312 - 53347360
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  53347312 ccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 53347360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 53432758 - 53432798
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaa 41  Q
    ||||| ||||||||||||||||| |||| ||||||||||||    
T  53432758 cccctgcatataatatgcaatatccctaccaactgagttaa 53432798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50022 - 50072
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  50022 cccctacatataatatgcaatatccctatcaactgagttaagctcacggga 50072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 18424922 - 18424969
Alignment:
Q  5 tacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  18424922 tacatataatatgcaatatccctaccaactgagttaagttcacgggat 18424969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19594282 - 19594235
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||    
T  19594282 cccctacatataatatgcaatatctctatcaactgagttaagctcacg 19594235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39697883 - 39697934
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| |||||||||    
T  39697883 cccctgcatataatatgcaatatccctatcaactgagctaagctcacgggat 39697934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42381134 - 42381185
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    ||||||||||||| ||||||||| |||| |||||||| ||||||||||||||    
T  42381134 cccctacatataacatgcaatatccctaccaactgagctaagttcacgggat 42381185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 56479247 - 56479294
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  56479247 cccctgcatataatatgcaatatccctaccaactgagttaagttcacg 56479294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 35207178 - 35207220
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||| |||||||||||||||||| ||||||    
T  35207178 catataatatgcaatatccctatcaactgagttaagctcacgg 35207220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 53572354 - 53572396
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||| |||||||||||||||||| ||||||    
T  53572354 catataatatgcaatatccctatcaactgagttaagctcacgg 53572396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3036076 - 3036125
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||||||    
T  3036076 cccctgcatataatatgcaatatccctaccaactgagttaagctcacggg 3036125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3157238 - 3157287
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| ||||||||||||    
T  3157238 cccctgcatataatatgcaatattcctaccaactgagctaagttcacggg 3157287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11375910 - 11375959
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| |||||||    
T  11375910 cccctgcatataatatgcaatatccctatcaactgagctaagctcacggg 11375959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 22230461 - 22230510
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgggattgaa 56  Q
    ||||||||||||||||| |||| |||||||| |||| |||||||||||||    
T  22230461 catataatatgcaatatccctaccaactgagctaagctcacgggattgaa 22230510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40051671 - 40051622
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||||    
T  40051671 cccctacatataatatgcaatatccctaccaactgagctaagctcacggg 40051622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 40994126 - 40994175
Alignment:
Q  3 cctacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    ||||||||||||||||||||| |||| |||||||| |||| |||||||||    
T  40994126 cctacatataatatgcaatatccctaccaactgagctaagctcacgggat 40994175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42218799 - 42218750
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||| ||||||||||||||| |||| |||||||| ||||||||||||    
T  42218799 cccctacgtataatatgcaatatccctaccaactgagctaagttcacggg 42218750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 12167643 - 12167683
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcac 47  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  12167643 catataatatgcaatatccctaccaactgagttaagttcac 12167683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13578486 - 13578534
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| ||||||    
T  13578486 cccctgcatataatatgcaatatccctaccaactgagttaagctcacgg 13578534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 42231555 - 42231511
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||||    
T  42231555 catataatatgcaatattcctaccaactgagttaagctcacggga 42231511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 45673700 - 45673652
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||| ||||||||||||||||| |||| ||||||||||||| |||||||    
T  45673700 ccctgcatataatatgcaatattcctaccaactgagttaagctcacggg 45673652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 54103585 - 54103625
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaa 41  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  54103585 cccctgcatataatatgcaatatccctatcaactgagttaa 54103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 4234312 - 4234355
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||    
T  4234312 catataatatgcaatatccctatcaactgagctaagctcacggg 4234355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 5179909 - 5179952
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| | || |||||||||||||||||||||    
T  5179909 catataatatgcaatatccttaccaactgagttaagttcacggg 5179952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7272566 - 7272519
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||||||||||||||||||||| | ||||||||||| ||| ||||||    
T  7272566 cccctacatataatatgcaatatccttatcaactgagctaaattcacg 7272519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 52798321 - 52798278
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  52798321 catataatatgcaatatccctaccaactgagttaagctcacggg 52798278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22788695 - 22788745
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| ||||||||    
T  22788695 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggga 22788745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43978057 - 43978007
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| ||||||||    
T  43978057 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggga 43978007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 48615499 - 48615545
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgggatt 53  Q
    ||||||||||||||||| |||| ||||||||||| | ||||||||||    
T  48615499 catataatatgcaatatccctaccaactgagttatgctcacgggatt 48615545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4357931 - 4357882
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||||||||||||||| ||||||  ||| |||||||| ||||||||||||    
T  4357931 cccctacatataatatacaatatctctaccaactgagctaagttcacggg 4357882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5165906 - 5165857
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| |||||||||||| |||| |||| ||||||||||||| |||||||    
T  5165906 cccctgcatataatatgcgatatccctaccaactgagttaagctcacggg 5165857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8965143 - 8965094
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  8965143 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 8965094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10402490 - 10402441
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| |||||||||||||||||  ||| ||||||||||||| |||||||    
T  10402490 cccctgcatataatatgcaatatctctaccaactgagttaagctcacggg 10402441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24680107 - 24680156
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  24680107 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 24680156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31852634 - 31852683
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||  |||| |||||||| |||| |||||||    
T  31852634 cccctacatataatatgcaataaccctaccaactgagataagctcacggg 31852683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37935910 - 37935861
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  37935910 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 37935861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39023224 - 39023175
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  39023224 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 39023175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 39696360 - 39696405
Alignment:
Q  3 cctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||||||||||||||||||| |||| |||||||| |||| |||||    
T  39696360 cctacatataatatgcaatatccctaccaactgagctaagctcacg 39696405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48569197 - 48569246
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  48569197 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 48569246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 49023006 - 49022965
Alignment:
Q  6 acatataatatgcaatatacctatcaactgagttaagttcac 47  Q
    |||| ||||||||||||| |||| ||||||||||||||||||    
T  49023006 acatctaatatgcaatattcctaccaactgagttaagttcac 49022965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 49901531 - 49901482
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  49901531 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 49901482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 52699231 - 52699198
Alignment:
Q  8 atataatatgcaatatacctatcaactgagttaa 41  Q
    |||||||||||||||| |||||||||||||||||    
T  52699231 atataatatgcaatattcctatcaactgagttaa 52699198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 56360733 - 56360782
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||| ||||||| |||| |||||||| ||| ||||||||    
T  56360733 cccctacatataatacgcaatatccctaccaactgagctaaattcacggg 56360782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 542835 - 542883
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| |||| |||||||||||| ||||||||||||| |||| ||||||    
T  542835 cccctgcatacaatatgcaatatccctatcaactgagctaagctcacgg 542883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 4105770 - 4105726
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||| ||||||||| ||||||||||||| |||| ||||||||    
T  4105770 catataaaatgcaatatccctatcaactgagctaagctcacggga 4105726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 4931938 - 4931890
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||| |||||||| | |||  |||||||||||||||||||||    
T  4931938 ccctacatatattatgcaatgtccctcgcaactgagttaagttcacggg 4931890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8282391 - 8282343
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| | |||||| ||||||||| ||||||    
T  8282391 cccctgcatataatatgcaatatccttatcaattgagttaagctcacgg 8282343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27743729 - 27743781
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgggatt 53  Q
    ||||| ||||||||||||||||| |||| |||||||| || | ||||||||||    
T  27743729 cccctgcatataatatgcaatatccctaccaactgagctacgctcacgggatt 27743781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30217648 - 30217600
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| ||||||    
T  30217648 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 30217600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37310076 - 37310036
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaa 41  Q
    ||||||||||||||||||||||| | || ||||||||||||    
T  37310076 cccctacatataatatgcaatatccataccaactgagttaa 37310036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40123170 - 40123218
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    |||||||||||||||| |||||| | |||||| |||||| |||||||||    
T  40123170 cccctacatataatatacaatatccatatcaaatgagtttagttcacgg 40123218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 6815 - 6769
Alignment:
Q  3 cctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  6815 cctacatataatatgcaatatccctaccaactgagttaagttcacgg 6769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41930154 - 41930104
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||||||    
T  41930154 cccctgcatataaaatgcaatatccctatcaactgagttaagttcacggga 41930104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5900341 - 5900292
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||||||    
T  5900341 cccctgcatataatatgcaatatccctaccaactgagttaagctcacggg 5900292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11188703 - 11188752
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| |||||||    
T  11188703 cccctgcatataatatgcaatattcctatcaactgagctaagctcacggg 11188752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12891606 - 12891557
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||||    
T  12891606 cccctacatataatatgcaatatccctaccaactgagctaagctcacggg 12891557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15241445 - 15241396
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| |||||||    
T  15241445 cccctgcatataatatgcaatattcctatcaactgagctaagctcacggg 15241396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26912882 - 26912833
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| |||| ||| ||||||||| |||||||    
T  26912882 cccctacatataatatgcaatatccctaccaattgagttaagctcacggg 26912833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 43580921 - 43580876
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||    
T  43580921 catataatatgcaatatccctaccaactgagctaagttcacgggat 43580876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 546851 - 546803
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| ||||||    
T  546851 cccctgcatataatatgcaatatccctaccaactgagttaagctcacgg 546803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10241774 - 10241726
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| ||||||    
T  10241774 cccctgcatataatatgcaatatccctaccaactgagttaagctcacgg 10241726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36124448 - 36124400
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| ||||||    
T  36124448 cccctgcatataatatgcaatattcctatcaactgagctaagctcacgg 36124400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38030957 - 38031001
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttc 45  Q
    ||||||||||||||||||||||| | || ||||||||||||||||    
T  38030957 cccctacatataatatgcaatattcataccaactgagttaagttc 38031001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2363018 - 2362971
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||||    
T  2363018 cccctgcatataatatgcaatatccctaccaactgagttaagctcacg 2362971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 40091520 - 40091477
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  40091520 catataatatgcaatatccctaccaactgagttaagctcacggg 40091477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 4153592 - 4153550
Alignment:
Q  5 tacatataatatgcaatatacctatcaactgagttaagttcac 47  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||    
T  4153592 tacatataaaatgcaatatccctaccaactgagttaagttcac 4153550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 6414116 - 6414070
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    |||| ||||||||||||||||| |||| ||||||||||||| |||||    
T  6414116 ccctgcatataatatgcaatatccctaccaactgagttaagctcacg 6414070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17666055 - 17666005
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| ||||||||    
T  17666055 cccctgcatataatatgcaatattcctaccaactgagctaagctcacggga 17666005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35112983 - 35113033
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||| ||||||||||||||||| ||||||||||||  |||| ||||||||    
T  35112983 cccctgcatataatatgcaatatccctatcaactgaactaagctcacggga 35113033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11146550 - 11146599
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||| ||||||||| | ||||||||||| |||| |||||||    
T  11146550 cccctacatataacatgcaatatccttatcaactgagctaagctcacggg 11146599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17545193 - 17545242
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  17545193 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 17545242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32423614 - 32423565
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| |||||||||| |||||| |||| ||||||||||||| |||||||    
T  32423614 cccctgcatataatatacaatatccctaacaactgagttaagctcacggg 32423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33736035 - 33736076
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaag 42  Q
    ||||| ||||||||||||||||| |||| |||||||||||||    
T  33736035 cccctgcatataatatgcaatatccctaccaactgagttaag 33736076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 38696734 - 38696689
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    ||||||||||| ||||| |||||||||||||||||| | |||||||    
T  38696734 catataatatgtaatatccctatcaactgagttaagcttacgggat 38696689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11786081 - 11786129
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||| ||||||||| |||| ||||||||||||| ||||||    
T  11786081 cccctgcatataaaatgcaatatccctaccaactgagttaagctcacgg 11786129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 11815636 - 11815680
Alignment:
Q  7 catataatatgcaatatacctatcaactgagt-taagttcacggg 50  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||    
T  11815636 catataatatgcaatatccctttcaactgagtgtaagttcacggg 11815680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28684921 - 28684969
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    |||||| ||||||||||||||||  ||||||||||||  ||||||||||    
T  28684921 cccctatatataatatgcaatatcgctatcaactgaggaaagttcacgg 28684969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 35515555 - 35515511
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||||    
T  35515555 catataatatgcaatatccctaccaactgagctaagctcacggga 35515511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 42158924 - 42158880
Alignment:
Q  8 atataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||||    
T  42158924 atataatatgcaatatccctacaaactgagctaagttcacgggat 42158880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7388504 - 7388455
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||||||    
T  7388504 cccctgcatataatatgcaatatccctaccaactgagttaagttcacggg 7388455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37290971 - 37290919
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgggatt 53  Q
    ||||| ||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  37290971 cccctgcatataatatgcaatatccctatcaactaagttaagctcacgggatt 37290919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 42880995 - 42880948
Alignment:
Q  3 cctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||||||    
T  42880995 cctacatataatatgcaatatccctaccaactgagttaagctcacggg 42880948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2792828 - 2792779
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| |||||||    
T  2792828 cccctgcatataatatgcaatatccctatcaactgagctaagctcacggg 2792779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8034433 - 8034482
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||||||    
T  8034433 cccctgcatataatatgcaatatccctaccaactgagttaagctcacggg 8034482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33618021 - 33617972
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||||||    
T  33618021 cccctgcatataatatgcaatatccctaccaactgagttaagctcacggg 33617972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40740574 - 40740533
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaag 42  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  40740574 cccctgcatataatatgcaatatccctatcaactgagttaag 40740533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43656085 - 43656036
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||||    
T  43656085 cccctacatataatatgcaatatccctaccaactgagctaagctcacggg 43656036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10083212 - 10083164
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| ||||||    
T  10083212 cccctgcatataatatgcaatatccctaccaactgagttaagctcacgg 10083164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 34472340 - 34472296
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||||    
T  34472340 catataatatgcaatatccctaccaactgagttaagctcacggga 34472296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 133458 - 133415
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||    
T  133458 catataatatgcaatatccctatcaactgagctaagctcacggg 133415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8698601 - 8698648
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||    
T  8698601 cccctacatataatatgcaatatccctaccaactgagctaagctcacg 8698648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23339917 - 23339968
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    |||||||||||||||| ||||||  ||| ||||||||||||| |||||||||    
T  23339917 cccctacatataatatacaatatctctaccaactgagttaagctcacgggat 23339968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 26567275 - 26567318
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||    
T  26567275 catataatatgcaatatccctatcaactgagctaagctcacggg 26567318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 37717406 - 37717363
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  37717406 catataatatgcaatatccctaccaactgagttaagctcacggg 37717363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41458344 - 41458297
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||||    
T  41458344 cccctgcatataatatgcaatatccctaccaactgagttaagctcacg 41458297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 13406643 - 13406601
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||    
T  13406643 catataatatgcaatatccctaccaactgagttaagctcacgg 13406601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 16432155 - 16432197
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||| |||| |||||||| |||||||||||    
T  16432155 catataatatgcaatatccctaccaactgagctaagttcacgg 16432197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 31450984 - 31451026
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||    
T  31450984 catataatatgcaatatccctaccaactgagttaagctcacgg 31451026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12246 - 12295
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  12246 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 12295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8265317 - 8265268
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  8265317 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 8265268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11710333 - 11710288
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttca 46  Q
    ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  11710333 cccctgcatgtaatatgcaatatccctaacaactgagttaagttca 11710288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16449174 - 16449125
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  16449174 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 16449125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17072584 - 17072633
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| |||||||||||||||||||||| |||||| | |||| |||||||    
T  17072584 cccctgcatataatatgcaatatacctaccaactgtgctaagctcacggg 17072633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17575687 - 17575638
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| |||||||||||||||||||||| |||||| | |||| |||||||    
T  17575687 cccctgcatataatatgcaatatacctaccaactgtgctaagctcacggg 17575638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20540127 - 20540176
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  20540127 cccctgcatataatatgcaatatccctaacaactgagctaagctcacggg 20540176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23178912 - 23178961
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  23178912 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 23178961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26022296 - 26022247
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  26022296 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 26022247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26395413 - 26395364
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||| ||||||||| | ||||||||||| ||||||||||||    
T  26395413 cccctgcatataaaatgcaatatccttatcaactgagataagttcacggg 26395364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 29499626 - 29499577
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    |||||||||||| ||||||||| |||| |||||||| | |||||||||||    
T  29499626 ccctacatataacatgcaatatccctaccaactgagctgagttcacggga 29499577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35939536 - 35939487
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  35939536 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 35939487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36540336 - 36540287
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||| ||||||||| |||| ||||||||||||| |||||||    
T  36540336 cccctgcatataaaatgcaatatccctaccaactgagttaagctcacggg 36540287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 38337049 - 38337098
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    |||||||||||||||||||||| |||| |||||||  ||| |||||||||    
T  38337049 ccctacatataatatgcaatatccctaccaactgaactaaattcacggga 38337098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 38344092 - 38344051
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||||||||||||||| |||| ||||||||||||| |||||    
T  38344092 catataatatgcaatatccctaccaactgagttaagctcacg 38344051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38402300 - 38402251
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| || |||||||||||||| |||| ||||||||||||| |||||||    
T  38402300 cccctgcaaataatatgcaatatccctaccaactgagttaagctcacggg 38402251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38955215 - 38955264
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||| ||||| |||| ||||||||||||| |||||||    
T  38955215 cccctgcatataatatgtaatatccctaccaactgagttaagctcacggg 38955264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41689931 - 41689882
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  41689931 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 41689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43856403 - 43856452
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||| ||||||||| |||| ||||||||||||| |||||||    
T  43856403 cccctgcatataaaatgcaatatccctaccaactgagttaagctcacggg 43856452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 7671388 - 7671428
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcac 47  Q
    |||||||||||||||||  |||||||||||||||| |||||    
T  7671388 catataatatgcaatatttctatcaactgagttaaattcac 7671428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 11127945 - 11127905
Alignment:
Q  8 atataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    |||||||||||||||| |||| |||||||| ||||||||||    
T  11127945 atataatatgcaatattcctaccaactgagctaagttcacg 11127905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 19163906 - 19163866
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcac 47  Q
    ||||| ||||||||||| |||| ||||||||||||||||||    
T  19163906 catattatatgcaatatccctaccaactgagttaagttcac 19163866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 23435260 - 23435300
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcac 47  Q
    ||||||||||||||||| ||||||||||||| |||| ||||    
T  23435260 catataatatgcaatatccctatcaactgagctaagctcac 23435300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23858246 - 23858198
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| ||||||    
T  23858246 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 23858198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 28460243 - 28460203
Alignment:
Q  8 atataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    |||||||||||||||| |||| ||||||||||||| |||||    
T  28460243 atataatatgcaatatccctaccaactgagttaagctcacg 28460203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 32719629 - 32719677
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  32719629 ccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 32719677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 34158684 - 34158728
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||||    
T  34158684 catataatatgcaatatccctaccaactgagctaagctcacggga 34158728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3392516 - 3392467
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| | |||||||||||||||| |||||||    
T  3392516 cccctacatataatatgcaatatccatatcaactgagttaagctcacggg 3392467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27704320 - 27704369
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||||||    
T  27704320 cccctgcatataatatgcaatattcctaccaactgagttaagttcacggg 27704369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 18223742 - 18223788
Alignment:
Q  5 tacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  18223742 tacatataatatgcaatatccctaccaactgagttaagctcacggga 18223788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12615800 - 12615759
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaag 42  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  12615800 cccctgcatataatatgcaatatccctatcaactgagttaag 12615759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37300120 - 37300169
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||||    
T  37300120 cccctacatataatatgcaatatccctaccaactgagctaagctcacggg 37300169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38889514 - 38889563
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||||||    
T  38889514 cccctgcatataatatgcaatatccctaccaactgagttaagctcacggg 38889563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47641094 - 47641045
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||||    
T  47641094 cccctacatataatatgcaatatccctaccaactgagctaagctcacggg 47641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2846081 - 2846129
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||| | ||||||||| ||||||||||||| |||||||||||    
T  2846081 cccctacatattacatgcaatatccctatcaactgagctaagttcacgg 2846129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9712219 - 9712267
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| ||||||    
T  9712219 cccctgcatataatatgcaatatccctaccaactgagttaagctcacgg 9712267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 43624515 - 43624471
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||||    
T  43624515 catataatatgcaatattcctatcaaatgagttaagttaacggga 43624471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 3766854 - 3766811
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  3766854 catataatatgcaatatccctaccaactgagttaagctcacggg 3766811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 10244912 - 10244959
Alignment:
Q  3 cctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||| |||| |||||||| |||| |||||||    
T  10244912 cctacatataatatgcaatatccctaccaactgagctaagctcacggg 10244959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24062032 - 24062083
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    ||||||||||||||||||||||| ||||  ||||||| |||| |||||||||    
T  24062032 cccctacatataatatgcaatatccctactaactgagctaagctcacgggat 24062083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 29281375 - 29281414
Alignment:
Q  12 aatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  29281375 aatatgcaatatccctatcaactgagttaagctcacggga 29281414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 32619397 - 32619350
Alignment:
Q  3 cctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||| | || ||||||||||||| |||||||    
T  32619397 cctacatataatatgcaatatccttaacaactgagttaagctcacggg 32619350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 47999827 - 47999780
Alignment:
Q  3 cctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||| |||| |||||||| |||| |||||||    
T  47999827 cctacatataatatgcaatatccctaccaactgagctaagctcacggg 47999780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 34267578 - 34267624
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgggatt 53  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||||||    
T  34267578 catataatatgcaatattcctaccaactgagctaagctcacgggatt 34267624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 48288428 - 48288470
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||    
T  48288428 catataatatgcaatatccctaccaactgagttaagctcacgg 48288470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2229024 - 2228975
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  2229024 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 2228975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9877288 - 9877337
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  9877288 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 9877337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15238938 - 15238889
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  15238938 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 15238889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19752989 - 19753038
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  19752989 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 19753038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21066935 - 21066886
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| |||| |||||||| |||  |||||||    
T  21066935 cccctacatataatatgcaatatccctaccaactgagctaaactcacggg 21066886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21762913 - 21762962
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  21762913 cccctgcatataatatgcaatatccttaccaactgagataagttcacggg 21762962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23102579 - 23102628
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  23102579 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 23102628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25833604 - 25833555
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  25833604 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 25833555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 28479355 - 28479396
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||||||||||||||| ||| |||| |||||||||||||||    
T  28479355 catataatatgcaatatccctgtcaattgagttaagttcacg 28479396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 29625964 - 29625923
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||||||||||||||| |||| ||||||||||||| |||||    
T  29625964 catataatatgcaatatccctaccaactgagttaagctcacg 29625923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40518910 - 40518959
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||||||||||| |||||||| | |||| |||||||| ||||||||||||    
T  40518910 cccctacatatattatgcaatgtccctaccaactgagctaagttcacggg 40518959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42548049 - 42548094
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttca 46  Q
    ||||||||||||| ||| ||||| |||| |||||||||||||||||    
T  42548049 cccctacatataaaatgtaatattcctaccaactgagttaagttca 42548094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12264103 - 12264055
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||| ||||||||| |||| |||||||| |||||||||||    
T  12264103 cccctgcatataaaatgcaatatccctaccaactgagctaagttcacgg 12264055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 15106718 - 15106758
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcac 47  Q
    ||||||||||||||||| |||| ||||||||||||| ||||    
T  15106718 catataatatgcaatatccctaccaactgagttaagctcac 15106758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 24781073 - 24781029
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||||    
T  24781073 catataatatgcaatatccctaccaactgagctaagctcacggga 24781029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 27510284 - 27510328
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||||    
T  27510284 catataatatgcaatatccctaccaactgagctaagctcacggga 27510328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38824646 - 38824694
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||| ||||||| ||||||||||||| |||| ||||||    
T  38824646 cccctgcatataatacgcaatatccctatcaactgagctaagctcacgg 38824694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41084088 - 41084040
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| ||||||    
T  41084088 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 41084040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42182219 - 42182267
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||  |||| ||||||||||||| ||||||    
T  42182219 cccctgcatataatatgcaatacccctaccaactgagttaagctcacgg 42182267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 44593509 - 44593553
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    |||||||||||||||||  |||| |||||||||||| ||||||||    
T  44593509 catataatatgcaatatctctattaactgagttaagctcacggga 44593553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 47287885 - 47287933
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||| ||| ||||| |||| ||||||||||||| ||||||    
T  47287885 cccctacatataaaatgtaatatccctaccaactgagttaagctcacgg 47287933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 23404 - 23360
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  23404 catataatatgcaatatccctaccaactgagttaagttcacggga 23360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 37441 - 37482
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||||||||||||||| |||| ||||||||||||| |||||    
T  37441 catataatatgcaatatccctaccaactgagttaagctcacg 37482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 27218931 - 27218883
Alignment:
Q  3 cctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||    
T  27218931 cctacatataatatgcaatatccctatcaactgagctaaggtcacggga 27218883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 28222906 - 28222862
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  28222906 catataatatgcaatatccctaccaactgagttaagttcacggga 28222862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6210103 - 6210054
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| ||||||||||||    
T  6210103 cccctgcatataatatgcaatatccctaccaactgagctaagttcacggg 6210054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27094828 - 27094877
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||||||    
T  27094828 cccctgcatataatatgcaatatccctaccaactgagttaagctcacggg 27094877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33697134 - 33697183
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||| ||||||||| |||||||||||||||||| |||||||    
T  33697134 cccctgcatataaaatgcaatatccctatcaactgagttaagctcacggg 33697183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8439724 - 8439673
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||||    
T  8439724 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggat 8439673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 9704460 - 9704417
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||    
T  9704460 catataatatgcaatatccctaccaactgagctaagttcacggg 9704417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 13732855 - 13732812
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  13732855 catataatatgcaatatccctaccaactgagttaagctcacggg 13732812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 31802096 - 31802053
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  31802096 catataatatgcaatatccctaccaactgagttaagctcacggg 31802053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4408407 - 4408358
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  4408407 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 4408358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7545378 - 7545329
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  7545378 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 7545329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7865376 - 7865425
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  7865376 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 7865425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9372222 - 9372271
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  9372222 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 9372271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9435675 - 9435626
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  9435675 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 9435626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15091497 - 15091448
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  15091497 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 15091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19892297 - 19892346
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| |||| |||||||  |||| |||||||    
T  19892297 cccctacatataatatgcaatatccctaccaactgaactaagctcacggg 19892346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 28237279 - 28237320
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||||||||||||||| |||| ||||||||||||| |||||    
T  28237279 catataatatgcaatatccctaccaactgagttaagctcacg 28237320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 361206 - 361166
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcac 47  Q
    ||||||||||||||||| |||| ||||||||||||| ||||    
T  361206 catataatatgcaatatccctaccaactgagttaagctcac 361166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3294813 - 3294765
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| ||||||    
T  3294813 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 3294765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22997385 - 22997337
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    |||||||||||||||| |||||| |||| |||||||| |||| ||||||    
T  22997385 cccctacatataatattcaatatccctaccaactgagctaagctcacgg 22997337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23791016 - 23791064
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    |||||||||||||||| |||||| |||| |||||||| |||| ||||||    
T  23791016 cccctacatataatattcaatatccctaccaactgagctaagctcacgg 23791064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 32049992 - 32050036
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| || |||||||||| ||||||||    
T  32049992 catataatatgcaatatccctaccagctgagttaagctcacggga 32050036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40363092 - 40363140
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  40363092 cccctacatataatatgcaatatccctaccaactgagttaagctcacgg 40363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9330522 - 9330572
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||| |||||||||||||||||  ||||||||||||||||| ||||||||    
T  9330522 cccctgcatataatatgcaatatctctatcaactgagttaagctcacggga 9330572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 33222179 - 33222221
Alignment:
Q  5 tacatataatatgcaatatacctatcaactgagttaagttcac 47  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  33222179 tacatataatatgcaatatccctaccaactgagttaagttcac 33222221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5062346 - 5062297
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||||| |||||||||||||||| |||| ||||||||||||| |||||||    
T  5062346 cccctatatataatatgcaatatccctaccaactgagttaagctcacggg 5062297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5521241 - 5521290
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| |||||||    
T  5521241 cccctgcatataatatgcaatatccctatcaactgagctaagctcacggg 5521290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33669785 - 33669736
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| ||||  |||||||||||| |||||||    
T  33669785 cccctacatataatatgcaatatccctactaactgagttaagctcacggg 33669736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17601128 - 17601080
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  17601128 cccctgcatatgatatgcaatatccctaccaactgagttaagttcacgg 17601080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 18559238 - 18559274
Alignment:
Q  5 tacatataatatgcaatatacctatcaactgagttaa 41  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18559238 tacatataatatgcaatatccctatcaactgagttaa 18559274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 32168974 - 32168931
Alignment:
Q  4 ctacatataatatgcaatatacctatcaactgagttaagttcac 47  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||    
T  32168974 ctacatataatatgcaatatccctaccaactgagttaagctcac 32168931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 39408717 - 39408760
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  39408717 catataatatgcaatatccctaccaactgagttaagctcacggg 39408760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2806522 - 2806572
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    |||||||||||||||| |||||| |||| |||||||| |||| ||||||||    
T  2806522 cccctacatataatatacaatatccctaccaactgagctaagctcacggga 2806572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 17487747 - 17487705
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||| |||| |||||||| |||||||||||    
T  17487747 catataatatgcaatatccctaccaactgagctaagttcacgg 17487705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 32609214 - 32609256
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||    
T  32609214 catataatatgcaatatccctaccaactgagttaagctcacgg 32609256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2289659 - 2289610
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  2289659 cccctgcatataatatgcaatattcctaccaactgagctaagctcacggg 2289610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8250322 - 8250371
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  8250322 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 8250371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33228954 - 33229003
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  33228954 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 33229003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33563230 - 33563279
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||| || |||||| |||| |||||||||||||||||||||    
T  33563230 cccctgcatataaaatacaatatccctaccaactgagttaagttcacggg 33563279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34614028 - 34613979
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  34614028 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 34613979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35798047 - 35798096
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| |||||||||||||||||  ||| ||||||||||||| |||||||    
T  35798047 cccctgcatataatatgcaatatctctaacaactgagttaagctcacggg 35798096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38400359 - 38400310
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  38400359 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 38400310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41566811 - 41566762
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  41566811 cccctgcatataatatgcaatattcctaccaactgagctaagctcacggg 41566762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43214405 - 43214356
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||||||||| | |||||||||| |||| ||||||||||||| |||||||    
T  43214405 cccctacataaattatgcaatatccctaccaactgagttaagctcacggg 43214356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 19612762 - 19612714
Alignment:
Q  3 cctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||||||| |||| |||||||  |||| ||||||||    
T  19612762 cctacatataatatgcaatatccctaccaactgaactaagctcacggga 19612714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 20898080 - 20898124
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    |||| |||||||||||  |||| ||||||||||||||||||||||    
T  20898080 cataaaatatgcaatacccctaccaactgagttaagttcacggga 20898124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29772299 - 29772347
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    |||| |||||||||||||||||| |||| |||||| |||||| ||||||    
T  29772299 ccccgacatataatatgcaatatccctaccaactgtgttaagctcacgg 29772347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37352514 - 37352554
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaa 41  Q
    ||||| ||||||||||||||||| |||| ||||||||||||    
T  37352514 cccctgcatataatatgcaatatccctaccaactgagttaa 37352554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 43842163 - 43842123
Alignment:
Q  9 tataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    |||||||| |||||| |||| ||||||||||||||||||||    
T  43842163 tataatatacaatatccctaccaactgagttaagttcacgg 43842123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 44948644 - 44948596
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  44948644 ccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 44948596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 46867881 - 46867923
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  46867881 catataatatgcaatatccctatgaactgagttaagttcacgg 46867923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 47478870 - 47478916
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    |||||||||||||||||||||| |||| ||||||||||||| |||||    
T  47478870 ccctacatataatatgcaatatccctaccaactgagttaagctcacg 47478916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42054382 - 42054333
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||||    
T  42054382 cccctacatataatatgcaatatccctaccaactgagctaagctcacggg 42054333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1604245 - 1604292
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  1604245 cccctacatataatatgcaatatcccta-caactgagttaatttcacgg 1604292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7191081 - 7191033
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| ||||||    
T  7191081 cccctgcatataatatgcaatatccctatcaactgagctaaggtcacgg 7191033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 48607771 - 48607819
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||||||||||| ||||||||| |||||||||||||||||  |||||||    
T  48607771 ccctacatataaaatgcaatatccctatcaactgagttaaactcacggg 48607819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 52426934 - 52426982
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| ||||||    
T  52426934 cccctgcatataatatgcaatatccctatcaactgagctaagctcacgg 52426982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 621626 - 621579
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||| |||| |||||||||||| ||||||||||||||||| ||||||    
T  621626 cccctgcataaaatatgcaatatccctatcaactgagttaaattcacg 621579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9866205 - 9866256
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgggat 52  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||||    
T  9866205 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggat 9866256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 28867527 - 28867480
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    |||| ||||||||||||||||| |||| |||||||| |||||||||||    
T  28867527 ccctccatataatatgcaatattcctaccaactgagctaagttcacgg 28867480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 44732676 - 44732633
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  44732676 catataatatgcaatatccctaccaactgagttaagctcacggg 44732633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 14349692 - 14349646
Alignment:
Q  2 ccctacatataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||||||||||||||||||||  ||| |||||||| ||||||||||    
T  14349692 ccctacatataatatgcaatatctctaccaactgagctaagttcacg 14349646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15390269 - 15390219
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||| ||||||||    
T  15390269 cccctgcatctaatatgcaatatccctaccaactgagttaagctcacggga 15390219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25034953 - 25034903
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||| ||||||||| |||| |||||||| |||| ||||||||    
T  25034953 cccctacatataaaatgcaatattcctaccaactgagctaagctcacggga 25034903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3269668 - 3269619
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  3269668 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 3269619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4553567 - 4553616
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| |||||||||||||||||  ||| ||||||||||||| |||||||    
T  4553567 cccctgcatataatatgcaatatttctaccaactgagttaagctcacggg 4553616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7166248 - 7166297
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  7166248 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 7166297  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8865903 - 8865854
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  8865903 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 8865854  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11081237 - 11081285
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||||| |||||||||||||||| |||| ||||||||||||| |||||||    
T  11081237 cccctagatataatatgcaatat-cctagcaactgagttaagctcacggg 11081285  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21265705 - 21265656
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  21265705 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 21265656  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22563435 - 22563386
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  22563435 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 22563386  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27579495 - 27579544
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||| ||||| | || |||||||||||||||||||||    
T  27579495 cccctgcatataatatgtaatatccataccaactgagttaagttcacggg 27579544  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33207254 - 33207205
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  33207254 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 33207205  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35605644 - 35605693
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  35605644 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 35605693  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42490431 - 42490480
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  42490431 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 42490480  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48897138 - 48897187
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| ||| ||||||||| |||||||    
T  48897138 cccctgcatataatatgcaatattcctaccaaatgagttaagctcacggg 48897187  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11215050 - 11215002
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| ||||||    
T  11215050 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 11215002  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 15775782 - 15775738
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| ||| ||||||||| ||||||||    
T  15775782 catataatatgcaatatccctaccaattgagttaagctcacggga 15775738  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26606693 - 26606733
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaa 41  Q
    |||| |||||||||||||||||| |||| ||||||||||||    
T  26606693 ccccgacatataatatgcaatattcctaccaactgagttaa 26606733  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40634250 - 40634210
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaa 41  Q
    ||||| ||||||||||||||||| |||| ||||||||||||    
T  40634250 cccctgcatataatatgcaatatccctaccaactgagttaa 40634210  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 42848758 - 42848802
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||||    
T  42848758 catataatatgcaatatccctatcaactgagctaagctcatggga 42848802  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 51942337 - 51942301
Alignment:
Q  8 atataatatgcaatatacctatcaactgagttaagtt 44  Q
    |||||||||||||||| |||| |||||||||||||||    
T  51942337 atataatatgcaatatccctaccaactgagttaagtt 51942301  T

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Target: scaffold1787 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1787
Description:

Target: scaffold1787; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 449 - 400
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||||||| |||| ||||||||||||    
T  449 cccctgcatataatatgcaatatccctatcaattgagctaagttcacggg 400  T

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Target: scaffold0294 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17282 - 17331
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||| ||| ||||||||| ||||||||||||||||||||||||||    
T  17282 cccctgcatgtaaaatgcaatatccctatcaactgagttaagttcacggg 17331  T

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Target: scaffold0690 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 3709 - 3665
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||||    
T  3709 catataatatgcaatatccctaccaactgagttaagctcacggga 3665  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 112151 - 112108
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  112151 catataatatgcaatatccctaccaactgagttaagctcacggg 112108  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 37075 - 37117
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacgg 49  Q
    ||||||||||||||||| | |||||||||||||||| ||||||    
T  37075 catataatatgcaatattcttatcaactgagttaagctcacgg 37117  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 65808 - 65854
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcac 47  Q
    ||||||||||||||||||||||| |||| |||||||| |||| ||||    
T  65808 cccctacatataatatgcaatatccctaccaactgagctaagctcac 65854  T

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Target: scaffold0179 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6031 - 5982
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    |||| |||||||||||||||||| |||||||| |||| |||| |||||||    
T  6031 cccccacatataatatgcaatatccctatcaaatgagctaagctcacggg 5982  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 12037 - 11996
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacg 48  Q
    ||||||||||||||||| |||| |||||||| ||||||||||    
T  12037 catataatatgcaatatccctaccaactgagctaagttcacg 11996  T

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Target: scaffold0121; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 46575 - 46526
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  46575 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 46526  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10847 - 10896
Alignment:
Q  1 cccctacatataatatgcaatatacctatcaactgagttaagttcacggg 50  Q
    ||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  10847 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 10896  T

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Target: scaffold0394 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 1305 - 1261
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    |||||||||| |||||| |||| ||||||||||||| ||||||||    
T  1305 catataatatacaatattcctaccaactgagttaagctcacggga 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 887 - 931
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||||    
T  887 catataatatgcaatatccctaccaactgagctaagctcacggga 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 1360 - 1316
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    |||||||||| |||||| |||| ||||||||||||| ||||||||    
T  1360 catataatatacaatattcctaccaactgagttaagctcacggga 1316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 12288 - 12332
Alignment:
Q  7 catataatatgcaatatacctatcaactgagttaagttcacggga 51  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||||    
T  12288 catataatatgcaatatccctaccaactgagctaagctcacggga 12332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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