View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18691_high_3 (Length: 292)
Name: NF18691_high_3
Description: NF18691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18691_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 54011029 - 54010767
Alignment:
| Q |
13 |
attatacttaccttcatgtttaatagagactctttatcatcctcacatgccaatttttattagcacatcacaaatattagatttcagttgtcgttttcgg |
112 |
Q |
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| T |
54011029 |
attatacttaccttcatgtttaatagagactctttatcatcctcacatgccaatttttattagcacatcacaaatattagatttcagttgtcgttttcgg |
54010930 |
T |
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| Q |
113 |
aacaacttggtcatgaattcgacatctcacaagatgtacagagaaacatcttttgagatgtcaactccgtggacagttctactacaacttgtgaaattag |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54010929 |
aacaacttggtcatgaattcgacatctcacaagatgtacagagaaacatattttgagatgtcaactccgtggacagttctactacaacttgtgaaattag |
54010830 |
T |
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| Q |
213 |
tctatgtaattgagctcgaaaataaataagaatcaactttccaaatttagctataatataagt |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54010829 |
tctatgtaattgagctcgaaaataaataagaatcaactttccaaatttagctataatataagt |
54010767 |
T |
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