View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18692_high_12 (Length: 206)
Name: NF18692_high_12
Description: NF18692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18692_high_12 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-106
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 8188045 - 8187840
Alignment:
| Q |
1 |
tcctcgccatgttcagaagctactgcactacagatttactcattatccgttatcttttccaaatctatatccatagatggcccactatctacaacattac |
100 |
Q |
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|||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8188045 |
tcctcgccatgttcagaatctactgcactacagatttgctcattatccgttatcttttccaaatctatatccatagatggcccactatctacaacattac |
8187946 |
T |
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| Q |
101 |
gatccaatccatcaccttcagaactcaaacttgatgaagcatccgaaagtgtttcctttagaaacaaaggattaaagtctgcatcttcttcttcctcttc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8187945 |
gatccaatccatcaccttcagaactcaaacttgatgaagcatctgaaagtgtttcctttagaaacaaaggattaaagtctgcatcttcttcttcctcttc |
8187846 |
T |
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| Q |
201 |
ctcttc |
206 |
Q |
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|||||| |
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| T |
8187845 |
ctcttc |
8187840 |
T |
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