View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18692_low_11 (Length: 214)

Name: NF18692_low_11
Description: NF18692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18692_low_11
NF18692_low_11
[»] chr4 (53 HSPs)
chr4 (101-183)||(26492110-26492192)
chr4 (101-185)||(51986145-51986229)
chr4 (101-181)||(38376378-38376458)
chr4 (101-184)||(26732328-26732411)
chr4 (101-183)||(23369218-23369300)
chr4 (105-181)||(43175091-43175167)
chr4 (105-183)||(44539841-44539919)
chr4 (101-178)||(24575742-24575819)
chr4 (108-181)||(53801647-53801720)
chr4 (105-181)||(39440591-39440667)
chr4 (105-183)||(37297156-37297233)
chr4 (101-183)||(10250401-10250483)
chr4 (104-182)||(36178012-36178090)
chr4 (101-182)||(5622561-5622642)
chr4 (108-181)||(15175656-15175729)
chr4 (105-182)||(26724859-26724936)
chr4 (111-184)||(29175338-29175411)
chr4 (108-185)||(37997364-37997441)
chr4 (101-186)||(46213073-46213158)
chr4 (105-184)||(11068795-11068874)
chr4 (111-183)||(2575676-2575748)
chr4 (111-183)||(34616674-34616746)
chr4 (111-183)||(39195170-39195242)
chr4 (105-184)||(31641450-31641529)
chr4 (108-183)||(38382431-38382506)
chr4 (108-183)||(39478547-39478622)
chr4 (108-183)||(42853687-42853762)
chr4 (108-183)||(47181951-47182026)
chr4 (108-183)||(48402083-48402158)
chr4 (105-182)||(27965094-27965169)
chr4 (109-181)||(38510661-38510731)
chr4 (111-182)||(27050973-27051044)
chr4 (108-183)||(56363931-56364006)
chr4 (119-181)||(5233558-5233620)
chr4 (112-185)||(19473840-19473913)
chr4 (105-141)||(29531534-29531570)
chr4 (105-173)||(38134460-38134528)
chr4 (108-180)||(56474656-56474728)
chr4 (112-175)||(45083086-45083149)
chr4 (1-31)||(1796369-1796399)
chr4 (1-31)||(5208365-5208395)
chr4 (1-31)||(7037522-7037552)
chr4 (1-31)||(27001447-27001477)
chr4 (1-31)||(39241328-39241358)
chr4 (107-141)||(42360265-42360299)
chr4 (1-31)||(51377331-51377361)
chr4 (1-31)||(51717320-51717350)
chr4 (1-31)||(55268039-55268069)
chr4 (124-181)||(26907970-26908027)
chr4 (125-182)||(39259080-39259137)
chr4 (112-181)||(39606086-39606155)
chr4 (147-183)||(2268405-2268441)
chr4 (105-141)||(46634207-46634243)
[»] chr8 (27 HSPs)
chr8 (101-183)||(27325861-27325943)
chr8 (105-175)||(36251433-36251503)
chr8 (105-178)||(32501087-32501160)
chr8 (105-182)||(34186714-34186791)
chr8 (105-181)||(4054174-4054250)
chr8 (103-183)||(12898815-12898895)
chr8 (101-185)||(37449309-37449393)
chr8 (105-175)||(5277393-5277463)
chr8 (105-181)||(42768311-42768387)
chr8 (101-181)||(22719543-22719623)
chr8 (108-182)||(11253429-11253503)
chr8 (112-178)||(36816507-36816573)
chr8 (105-181)||(7271957-7272033)
chr8 (101-185)||(43397884-43397968)
chr8 (108-182)||(29025370-29025444)
chr8 (112-180)||(36660339-36660407)
chr8 (112-184)||(37133747-37133819)
chr8 (111-182)||(24479336-24479407)
chr8 (104-141)||(31249452-31249489)
chr8 (105-182)||(34639640-34639717)
chr8 (118-182)||(10692551-10692615)
chr8 (1-31)||(1065420-1065450)
chr8 (1-31)||(20288536-20288566)
chr8 (1-31)||(21075165-21075195)
chr8 (1-31)||(21648969-21648999)
chr8 (1-31)||(30927969-30927999)
chr8 (112-141)||(10731660-10731689)
[»] chr3 (53 HSPs)
chr3 (101-182)||(52939754-52939835)
chr3 (101-181)||(19149093-19149173)
chr3 (101-184)||(27541387-27541470)
chr3 (105-184)||(38926735-38926814)
chr3 (105-185)||(5114185-5114265)
chr3 (101-177)||(5244332-5244408)
chr3 (105-181)||(42356972-42357048)
chr3 (101-181)||(44413283-44413363)
chr3 (101-181)||(47472432-47472512)
chr3 (101-183)||(44813239-44813321)
chr3 (105-181)||(32924169-32924245)
chr3 (101-185)||(44856056-44856140)
chr3 (102-181)||(16969454-16969533)
chr3 (101-184)||(37302649-37302732)
chr3 (108-183)||(52326129-52326204)
chr3 (105-182)||(52254025-52254102)
chr3 (105-181)||(13735837-13735913)
chr3 (108-180)||(24256660-24256732)
chr3 (101-181)||(36670902-36670982)
chr3 (108-178)||(42358529-42358599)
chr3 (105-183)||(46624014-46624092)
chr3 (108-181)||(26014922-26014995)
chr3 (105-182)||(41309224-41309301)
chr3 (105-181)||(7934081-7934157)
chr3 (105-184)||(33939345-33939424)
chr3 (112-182)||(55151604-55151674)
chr3 (108-184)||(31157562-31157638)
chr3 (105-185)||(35597269-35597349)
chr3 (108-183)||(44383299-44383374)
chr3 (101-183)||(35376967-35377049)
chr3 (111-181)||(37503635-37503705)
chr3 (101-158)||(20547901-20547958)
chr3 (105-181)||(288833-288909)
chr3 (108-184)||(13348019-13348095)
chr3 (108-183)||(21217622-21217697)
chr3 (108-183)||(37056943-37057018)
chr3 (101-178)||(8847213-8847289)
chr3 (108-180)||(23592568-23592640)
chr3 (102-185)||(7668072-7668154)
chr3 (101-187)||(25641465-25641551)
chr3 (111-185)||(44445407-44445481)
chr3 (112-177)||(11630642-11630707)
chr3 (108-180)||(23600703-23600775)
chr3 (109-182)||(39630504-39630577)
chr3 (105-141)||(41505598-41505634)
chr3 (101-133)||(45000166-45000198)
chr3 (101-141)||(50318317-50318357)
chr3 (1-31)||(3069612-3069642)
chr3 (1-31)||(20714246-20714276)
chr3 (1-31)||(32931956-32931986)
chr3 (1-31)||(36818959-36818989)
chr3 (127-184)||(42478086-42478145)
chr3 (101-181)||(42889088-42889168)
[»] chr5 (37 HSPs)
chr5 (101-184)||(18258678-18258761)
chr5 (108-183)||(1671652-1671727)
chr5 (101-183)||(26791130-26791212)
chr5 (101-181)||(14923176-14923256)
chr5 (101-181)||(28306020-28306100)
chr5 (105-181)||(33037627-33037703)
chr5 (105-183)||(36739055-36739133)
chr5 (108-181)||(41321365-41321438)
chr5 (101-180)||(13168625-13168704)
chr5 (102-180)||(1764328-1764406)
chr5 (101-182)||(5168286-5168367)
chr5 (105-181)||(7287077-7287153)
chr5 (105-185)||(28467337-28467417)
chr5 (108-178)||(2972434-2972504)
chr5 (101-182)||(14051202-14051283)
chr5 (108-191)||(13309993-13310076)
chr5 (111-189)||(39591793-39591871)
chr5 (111-189)||(39592185-39592263)
chr5 (108-189)||(8687001-8687082)
chr5 (108-181)||(15479579-15479652)
chr5 (101-173)||(7076464-7076536)
chr5 (108-183)||(17626096-17626171)
chr5 (115-182)||(35634722-35634789)
chr5 (111-183)||(1274471-1274542)
chr5 (112-184)||(7552852-7552924)
chr5 (113-180)||(42175034-42175101)
chr5 (108-184)||(22972227-22972303)
chr5 (112-179)||(39054701-39054768)
chr5 (1-31)||(3263546-3263576)
chr5 (1-31)||(9594481-9594511)
chr5 (1-31)||(9599766-9599796)
chr5 (1-31)||(12718418-12718448)
chr5 (1-31)||(12779644-12779674)
chr5 (1-31)||(30574415-30574445)
chr5 (101-141)||(1079880-1079920)
chr5 (119-183)||(4088565-4088629)
chr5 (105-141)||(35646490-35646526)
[»] chr2 (41 HSPs)
chr2 (101-180)||(9207693-9207772)
chr2 (101-183)||(22888703-22888785)
chr2 (101-184)||(9760121-9760204)
chr2 (101-184)||(18254094-18254177)
chr2 (101-183)||(1248789-1248871)
chr2 (105-183)||(43487486-43487564)
chr2 (101-178)||(6049236-6049313)
chr2 (101-184)||(42421783-42421866)
chr2 (101-185)||(9194344-9194428)
chr2 (104-184)||(9990797-9990877)
chr2 (108-186)||(32477442-32477520)
chr2 (112-181)||(3838768-3838837)
chr2 (105-178)||(42091393-42091468)
chr2 (108-183)||(2076679-2076754)
chr2 (101-180)||(34944979-34945058)
chr2 (105-186)||(19633389-19633471)
chr2 (105-186)||(19830290-19830372)
chr2 (105-190)||(9647239-9647324)
chr2 (111-184)||(41042367-41042440)
chr2 (101-181)||(7698274-7698354)
chr2 (112-183)||(8848583-8848654)
chr2 (109-184)||(21611540-21611615)
chr2 (108-183)||(25270468-25270543)
chr2 (111-182)||(37737858-37737929)
chr2 (111-182)||(41195697-41195768)
chr2 (101-141)||(17388531-17388571)
chr2 (112-182)||(27490617-27490687)
chr2 (111-183)||(3097747-3097819)
chr2 (108-180)||(41056636-41056708)
chr2 (112-183)||(13333056-13333127)
chr2 (105-141)||(6511358-6511394)
chr2 (101-141)||(44287370-44287410)
chr2 (126-181)||(42434247-42434302)
chr2 (120-182)||(18846733-18846795)
chr2 (1-31)||(25801840-25801870)
chr2 (114-180)||(29349622-29349688)
chr2 (1-31)||(30487507-30487537)
chr2 (1-31)||(34144589-34144619)
chr2 (1-31)||(37966370-37966400)
chr2 (101-141)||(22416316-22416356)
chr2 (147-183)||(22416350-22416386)
[»] chr1 (49 HSPs)
chr1 (101-183)||(27464943-27465025)
chr1 (105-178)||(45333818-45333891)
chr1 (105-181)||(26469466-26469542)
chr1 (101-181)||(48470742-48470822)
chr1 (105-184)||(649876-649955)
chr1 (101-183)||(31088284-31088366)
chr1 (101-183)||(45121367-45121448)
chr1 (105-181)||(44914459-44914536)
chr1 (101-181)||(50726136-50726216)
chr1 (101-184)||(23645514-23645597)
chr1 (105-184)||(37274918-37274997)
chr1 (111-185)||(19055643-19055717)
chr1 (105-182)||(33100915-33100992)
chr1 (105-181)||(8350087-8350162)
chr1 (105-177)||(35369807-35369879)
chr1 (108-181)||(44519039-44519112)
chr1 (106-182)||(30735180-30735256)
chr1 (101-181)||(37619647-37619727)
chr1 (101-185)||(45640405-45640488)
chr1 (106-181)||(15469945-15470019)
chr1 (108-183)||(21401508-21401583)
chr1 (108-175)||(50932414-50932481)
chr1 (105-175)||(3851265-3851335)
chr1 (111-181)||(3981914-3981984)
chr1 (105-186)||(37685436-37685517)
chr1 (105-186)||(37700001-37700082)
chr1 (101-177)||(40861154-40861230)
chr1 (111-191)||(43775319-43775399)
chr1 (101-184)||(18434898-18434981)
chr1 (108-183)||(46907305-46907380)
chr1 (108-182)||(52576188-52576263)
chr1 (105-186)||(2571742-2571824)
chr1 (112-186)||(50149060-50149134)
chr1 (101-180)||(49065253-49065332)
chr1 (101-138)||(3159479-3159516)
chr1 (108-181)||(19947632-19947705)
chr1 (119-183)||(30467419-30467483)
chr1 (102-181)||(48103250-48103330)
chr1 (111-182)||(31827064-31827135)
chr1 (101-151)||(4776859-4776909)
chr1 (1-31)||(13813561-13813591)
chr1 (147-185)||(41677220-41677258)
chr1 (108-141)||(6693267-6693300)
chr1 (104-141)||(12657329-12657366)
chr1 (108-185)||(18512227-18512304)
chr1 (112-181)||(26207955-26208024)
chr1 (119-180)||(30570645-30570706)
chr1 (1-29)||(36439660-36439688)
chr1 (127-187)||(50333337-50333397)
[»] scaffold0199 (1 HSPs)
scaffold0199 (105-185)||(8775-8855)
[»] chr7 (24 HSPs)
chr7 (101-181)||(38956506-38956586)
chr7 (105-180)||(32529745-32529820)
chr7 (101-181)||(44895460-44895540)
chr7 (101-184)||(3937008-3937091)
chr7 (105-182)||(24614203-24614280)
chr7 (101-182)||(40112841-40112922)
chr7 (101-182)||(43025443-43025524)
chr7 (101-181)||(22918057-22918137)
chr7 (109-184)||(43942743-43942818)
chr7 (108-182)||(41189428-41189504)
chr7 (105-184)||(25192802-25192881)
chr7 (101-181)||(41989628-41989710)
chr7 (108-183)||(46022153-46022228)
chr7 (108-181)||(40417884-40417957)
chr7 (112-181)||(45851095-45851164)
chr7 (108-183)||(7701654-7701729)
chr7 (111-182)||(31445431-31445502)
chr7 (101-141)||(38073323-38073363)
chr7 (101-141)||(38861199-38861239)
chr7 (101-181)||(46578023-46578103)
chr7 (1-31)||(25200397-25200427)
chr7 (1-31)||(30864455-30864485)
chr7 (1-31)||(31274567-31274597)
chr7 (1-31)||(37325857-37325887)
[»] chr6 (21 HSPs)
chr6 (101-181)||(552896-552976)
chr6 (101-181)||(14818035-14818115)
chr6 (105-184)||(33430247-33430326)
chr6 (106-184)||(15974716-15974794)
chr6 (108-182)||(32316815-32316889)
chr6 (101-182)||(1156823-1156904)
chr6 (108-180)||(11612298-11612370)
chr6 (108-181)||(13689882-13689955)
chr6 (108-176)||(18737460-18737528)
chr6 (108-184)||(26595459-26595535)
chr6 (105-181)||(31077901-31077977)
chr6 (108-183)||(16199560-16199635)
chr6 (101-184)||(34047490-34047573)
chr6 (110-183)||(4820479-4820552)
chr6 (108-181)||(5694039-5694112)
chr6 (1-31)||(2056786-2056816)
chr6 (1-31)||(9954551-9954581)
chr6 (112-181)||(277105-277174)
chr6 (112-181)||(22079451-22079520)
chr6 (111-184)||(24900887-24900960)
chr6 (105-133)||(5080503-5080531)
[»] scaffold0056 (1 HSPs)
scaffold0056 (101-184)||(76504-76587)
[»] scaffold0098 (1 HSPs)
scaffold0098 (105-181)||(49402-49478)
[»] scaffold0519 (1 HSPs)
scaffold0519 (108-182)||(11892-11966)
[»] scaffold0067 (1 HSPs)
scaffold0067 (105-141)||(35630-35666)
[»] scaffold0148 (1 HSPs)
scaffold0148 (125-184)||(20786-20845)


Alignment Details
Target: chr4 (Bit Score: 71; Significance: 2e-32; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 26492110 - 26492192
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  26492110 gtgccactacttcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaactctt 26492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 51986145 - 51986229
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||||    
T  51986145 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctttt 51986229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 38376458 - 38376378
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  38376458 gtgccactatctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactc 38376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 26732328 - 26732411
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  26732328 gtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 26732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 23369300 - 23369218
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||||||||||||||||||| |||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  23369300 gtgccactacctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 23369218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 43175091 - 43175167
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||| |||||| |||||||||||||||||||||    
T  43175091 cactacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 44539841 - 44539919
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||||  ||||||||||||||||||||||    
T  44539841 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 44539919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 24575819 - 24575742
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 178  Q
    |||||| ||||||||||||||| |||||||||| ||||||| ||| |||||| |||||||||||||||||||||||||    
T  24575819 gtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 53801720 - 53801647
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  53801720 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 53801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 39440591 - 39440667
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||| ||||||  ||||||||||||||||||||    
T  39440591 cactacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 37297156 - 37297233
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    ||||||||||||||||| ||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  37297156 cactacctcatttcctt-gtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaactctt 37297233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 10250483 - 10250401
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||||| ||||||||||||||| ||||||| ||| |||||  |||||| |||||||||||||||||| ||||    
T  10250483 gtgccactacttcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacacaattctt 10250401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 104 - 182
Target Start/End: Original strand, 36178012 - 36178090
Alignment:
Q  104 ccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||||| |||||||||  ||||||| ||| || ||| ||||||| |||||||||||||||||||||    
T  36178012 ccactacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactct 36178090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 5622561 - 5622642
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||| |||||||||||||||||||||||||||  || |||| ||| |||| | |||||||||| ||||||||||||||||||    
T  5622561 gtgcaactacctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaactct 5622642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 15175656 - 15175729
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||||||||||| |||| || ||| |||||| |||||| ||||||||||||| |||||||    
T  15175656 tacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataatacaactc 15175729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 26724936 - 26724859
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||||||||||||||  |||| || ||| || ||| |||||| ||||||||||||||||||||||    
T  26724936 cactacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaactct 26724859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 29175338 - 29175411
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||| ||||||||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||||    
T  29175338 ctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttt 29175411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 37997364 - 37997441
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    |||||||||| ||||||||||||||| |||| || |||||| ||| ||||||||||||||||||| |||| |||||||    
T  37997364 tacctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaatagcacagctctttt 37997441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 46213073 - 46213158
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 186  Q
    |||| |||||||||||||||||||||||||||| |||| || ||| || ||| |||||| ||| ||||||||||||||||| ||||    
T  46213073 gtgcaactacctcatttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaataacacaactcattta 46213158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 11068795 - 11068874
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||| |||||||||||||||||||||||| ||| ||| ||| |||||| ||||||  ||||||||||||||||| |||||    
T  11068795 cactgcctcatttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacacaattcttt 11068874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 2575748 - 2575676
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    ||||||| |||||||||| |||  ||||||| ||| |||||| ||| ||||||||||||||||||||||||||    
T  2575748 ctcattttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaactctt 2575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 34616674 - 34616746
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    ||||||| |||| |||||||||| ||||| | ||| |||||| ||| ||||||||||||||||||||||||||    
T  34616674 ctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactctt 34616746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 39195170 - 39195242
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    ||||||| |||||||||| ||||||| |||| ||  |||||| ||| ||||||||||||||||||||||||||    
T  39195170 ctcattttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaataacacaactctt 39195242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 31641529 - 31641450
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||||| ||||||||| |||||||||| ||||||| ||| || |||  |||||  |||||||||||||||||||||||    
T  31641529 cactaccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactcttt 31641450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 38382431 - 38382506
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  38382431 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 38382506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 39478547 - 39478622
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| |||||| ||  ||||||||||||    
T  39478547 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcatatatatggatgtttaataaacacaactctt 39478622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 42853687 - 42853762
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||||||||| | ||||||||||   | || |||||||||||||||||||||||    
T  42853687 tacctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaactctt 42853762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 47181951 - 47182026
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  47181951 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 47182026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 48402158 - 48402083
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  48402158 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 48402083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 27965094 - 27965169
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||| ||  ||||||||| |||||||  || |||||| |||||| ||||||||||||||||||||||    
T  27965094 cactacctcatttccatt--aaaattttggttgtcacagaagttgtcacatatatggatgttcaaataacacaactct 27965169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 38510731 - 38510661
Alignment:
Q  109 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||  ||||||| ||||| ||||||||||||||    
T  38510731 accttatttcctttataaaattttgattgtcacaaaaattatc--atatataaatgttgaaataacacaactc 38510661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 27051044 - 27050973
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||| ||||||||||||||| ||||||| ||| |||||| || |||  |||||||||||||||| ||||    
T  27051044 ctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacacatctct 27050973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 56364006 - 56363931
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||| ||||| | ||| ||||||  || || |||||||||||||||||||||||    
T  56364006 tacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactctt 56363931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 5233620 - 5233558
Alignment:
Q  119 ctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||  | ||| |||| | ||| ||||||||||||||||||||||||    
T  5233620 ctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaactc 5233558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 19473913 - 19473840
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    |||||| ||||||||||||||||||||| | ||| |||||| ||| ||  || |||||||||||||| ||||||    
T  19473913 tcattttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaaatctttt 19473840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 29531570 - 29531534
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcac 141  Q
    ||||||||||||||||||||||||||||| |||||||    
T  29531570 cactacctcatttcctttgtaaaattttggttgtcac 29531534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 38134460 - 38134528
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataa 173  Q
    |||| |||||||||||||||||||||||| || |||| ||| |||||| || |||  ||||||||||||    
T  38134460 cactgcctcatttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 56474728 - 56474656
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    |||||||||| ||||||||| ||||| ||||| | |||||||| |  |  |||||||||||||||||||||||    
T  56474728 tacctcattttctttgtaaagttttggttgtctcaaaaattgttatgtgaatagatgttcaaataacacaact 56474656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 45083086 - 45083149
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 175  Q
    |||||| |||| ||||||||||||||| |  ||| |||||| |||||| |||||||||||||||    
T  45083086 tcattttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 1796369 - 1796399
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  1796369 aaatgatatttgtacaaccaatttgtgacaa 1796399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 5208395 - 5208365
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  5208395 aaatgatatttgtacaaccaatttgtgacaa 5208365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 7037552 - 7037522
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  7037552 aaatgatatttgtacaaccaatttgtgacaa 7037522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 27001477 - 27001447
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  27001477 aaatgatatttgtacaaccaatttgtgacaa 27001447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 39241358 - 39241328
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  39241358 aaatgatatttgtacaaccaatttgtgacaa 39241328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 42360265 - 42360299
Alignment:
Q  107 ctacctcatttcctttgtaaaattttgattgtcac 141  Q
    ||||||||||||||||||||||||||| |||||||    
T  42360265 ctacctcatttcctttgtaaaattttggttgtcac 42360299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 51377361 - 51377331
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  51377361 aaatgatatttgtacaaccaatttgtgacaa 51377331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 51717350 - 51717320
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  51717350 aaatgatatttgtacaaccaatttgtgacaa 51717320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 55268069 - 55268039
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  55268069 aaatgatatttgtacaaccaatttgtgacaa 55268039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 26908027 - 26907970
Alignment:
Q  124 taaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||| |||||||  |||||| ||| |||||| ||| |||||||||||||||||    
T  26908027 taaaattttaattgtcataaaaattatcacatatatggatattcaaataacacaactc 26907970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 39259080 - 39259137
Alignment:
Q  125 aaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||| |||||||| ||||||||||  || || ||| ||||||||||||||||||    
T  39259080 aaaattttaattgtcacaaaaattgtcatctaaatggatattcaaataacacaactct 39259137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 39606086 - 39606155
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||| |||||||||| || ||   ||| |||||| ||||||| |||||||||||| |||||||    
T  39606086 tcatttcctttataaaattttggttatcgtaaaagttgtcacatatataaatgttcaaataatacaactc 39606155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 2268441 - 2268405
Alignment:
Q  147 ttgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||| |||||| |||||||||||||||||||||||    
T  2268441 ttgtcacatatatggatgttcaaataacacaactctt 2268405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 46634207 - 46634243
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcac 141  Q
    ||||||||||||||||||||||||||||  |||||||    
T  46634207 cactacctcatttcctttgtaaaattttagttgtcac 46634243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 27325861 - 27325943
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||||||||||    
T  27325861 gtgccactacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaactctt 27325943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 36251433 - 36251503
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 175  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||| |||||| |||||||||||||||    
T  36251433 cactacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 32501160 - 32501087
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 178  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||| ||||||||||||||||||    
T  32501160 cactacctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacacaa 32501087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 34186714 - 34186791
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||| || ||| ||||||||||||||||||||||    
T  34186714 cactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactct 34186791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 4054250 - 4054174
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||| |||||||| ||||||||||||| ||| |||||| ||||||| ||||||||||||||||||||    
T  4054250 cactacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaactc 4054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 12898895 - 12898815
Alignment:
Q  103 gccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||| |||||||    
T  12898895 gccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacataactctt 12898815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 37449393 - 37449309
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||| || ||| |||||| ||| |||||||||||||||||||||    
T  37449393 gtgctactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaactctttt 37449309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 5277463 - 5277393
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 175  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||| || ||| |||||||||||||||    
T  5277463 cactacctcatttcctttgtaaaattttgattgtcacataaattgtcacatgtatggatgttcaaataaca 5277393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 42768311 - 42768387
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||| |||||||||||||||||||||||  ||||||| |||||| ||| |||||| |||||||||||||||||||||    
T  42768311 cactgcctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 42768387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 22719543 - 22719623
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||| |||||||||||| ||||||||||||||| || |||| ||| |||||| |||||| | |||||||||||||||||||    
T  22719543 gtgcaactacctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaactc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 11253503 - 11253429
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||||| ||||||||||||||| | ||||| ||| |||||| || ||||||||||||||||| ||||||||    
T  11253503 tacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11253429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 36816573 - 36816507
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 178  Q
    |||||| ||||| |||||||||||| |||| ||| |||||| |||||||||||||||||||||||||    
T  36816573 tcattttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 7271957 - 7272033
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||| |||||||| |||| ||||||||||||||||| ||| |||||| || ||| |||||||| ||||||||||||    
T  7271957 cactatctcatttcttttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcatataacacaactc 7272033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 43397884 - 43397968
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    ||||||||| ||||||| ||||||||||||||| ||||||| |||  ||||| || ||| ||||||||| ||||||| |||||||    
T  43397884 gtgccactatctcattttctttgtaaaattttggttgtcacaaaagctgtcacatgtatggatgttcaattaacacatctctttt 43397968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 29025370 - 29025444
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||||| ||||||||||||||| ||||| | ||| |||||| ||| || |||||| |||||||||||||||    
T  29025370 tacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaactct 29025444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 36660407 - 36660339
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    |||||| |||| |||||||||||||||||| ||| || ||| || ||| ||||||||||||||||||||    
T  36660407 tcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacacaact 36660339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 37133819 - 37133747
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||| ||||||||||||||| ||||||| ||| ||||||  || || |||||| |||||||||||||||||    
T  37133819 tcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaactcttt 37133747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 24479336 - 24479407
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||||||||  ||||||| ||| || ||| ||||||  ||| |||||||||||||||||    
T  24479336 ctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactct 24479407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 31249489 - 31249452
Alignment:
Q  104 ccactacctcatttcctttgtaaaattttgattgtcac 141  Q
    |||||||||||||||||||||||||||||| |||||||    
T  31249489 ccactacctcatttcctttgtaaaattttggttgtcac 31249452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 34639640 - 34639717
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||||||||  ||||||||||||||||| || | |||||| |||  || || ||||||||||||||| ||||||    
T  34639640 cactacctcattttatttgtaaaattttgattctctcaaaaattatcatgtaaatggatgttcaaataacataactct 34639717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 10692551 - 10692615
Alignment:
Q  118 cctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||||||||||||||||||   || ||| || |||||| ||||||||||||| ||||||||    
T  10692551 cctttgtaaaattttgattgtcagagaagttgacacatatatggatgttcaaataatacaactct 10692615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 1065420 - 1065450
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  1065420 aaatgatatttgtacaaccaatttgtgacaa 1065450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 20288536 - 20288566
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  20288536 aaatgatatttgtacaaccaatttgtgacaa 20288566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 21075165 - 21075195
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  21075165 aaatgatatttgtacaaccaatttgtgacaa 21075195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 21648999 - 21648969
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  21648999 aaatgatatttgtacaaccaatttgtgacaa 21648969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 30927999 - 30927969
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  30927999 aaatgatatttgtacaaccaatttgtgacaa 30927969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 10731660 - 10731689
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcac 141  Q
    ||||||||||||||||||||||||||||||    
T  10731660 tcatttcctttgtaaaattttgattgtcac 10731689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 2e-29; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 52939754 - 52939835
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  52939754 gtgccactacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactct 52939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 19149093 - 19149173
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  19149093 gtgccactaactcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 27541470 - 27541387
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  27541470 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 27541387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 38926735 - 38926814
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  38926735 cactaccttatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaactcttt 38926814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 5114185 - 5114265
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||    
T  5114185 cactacctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactctttt 5114265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 5244332 - 5244408
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 177  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||    
T  5244332 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacaca 5244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 42357048 - 42356972
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||||||||||||||||||||    
T  42357048 cactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 44413363 - 44413283
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  44413363 gtgccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 47472432 - 47472512
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||||||||| |||||    
T  47472432 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacataactc 47472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 44813239 - 44813321
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||| |||||||||||    
T  44813239 gtgccactacctaatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaactctt 44813321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 32924245 - 32924169
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  32924245 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 44856056 - 44856140
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    ||||||||||||||||||||||||||||||||| ||||||   || |||||| |||||| |||||||||||||||||||||||||    
T  44856056 gtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactctttt 44856140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 16969533 - 16969454
Alignment:
Q  102 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||||||||||||||||  ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  16969533 tgccactacctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 37302649 - 37302732
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| |||||| || ||| ||||||||||||| ||||||||||    
T  37302649 gtgccactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactcttt 37302732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 52326129 - 52326204
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||||||||||||||||||||||||||  ||| |||||| |||||| |||||||||||||||||||||||    
T  52326129 tacctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaactctt 52326204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 52254102 - 52254025
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||| |||||| ||||||||||| ||||||||||    
T  52254102 cactacctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaactct 52254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 13735837 - 13735913
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||| ||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  13735837 cactacctcatttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 24256732 - 24256660
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||| ||||||||||||||||    
T  24256732 tacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacacaact 24256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 36670982 - 36670902
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||| || ||| |||||| |||||||||||||||||||||    
T  36670982 gtgccactacctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 36670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 42358599 - 42358529
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 178  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||    
T  42358599 tacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 46624014 - 46624092
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    ||||||||||||| ||||||||||||||||||||||| ||| || ||| || ||| |||||||||||||||||||||||    
T  46624014 cactacctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactctt 46624092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 26014922 - 26014995
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||| || |||||||||| ||||||||||||||    
T  26014922 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaactc 26014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 41309224 - 41309301
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||| ||||||||||||||||||||||| ||| || ||  |||||| ||||||||||||||||||||||    
T  41309224 cactacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaactct 41309301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 7934081 - 7934157
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||| ||||| ||||||||||||||||  ||||||| |||||||||| |||||| |||||||||||||||||||||    
T  7934081 cactatctcatatcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 33939345 - 33939424
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||| |||||||||||| | ||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  33939345 cactacttcatttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 33939424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 55151674 - 55151604
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||||||| ||||| || ||| |||||| ||||||| |||||||||||||||||||||    
T  55151674 tcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactct 55151604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 31157638 - 31157562
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||| |||||||||||||||||||||| |||||  || || ||| |||||| ||||||||||||||||||||||||    
T  31157638 tacctaatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaactcttt 31157562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 35597269 - 35597349
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    ||||||||| ||||||||||||||||||| ||||||| ||| |||||| ||||||  || |||||||||||||||| ||||    
T  35597269 cactacctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaactttttt 35597349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 44383299 - 44383374
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||||||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  44383299 tacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 44383374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 35377049 - 35376967
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||| ||| |||||| ||||||||||||||| ||||||| ||| ||||||  || || |||||||||||||||||||||||    
T  35377049 gtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactctt 35376967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 37503705 - 37503635
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||| ||||||||| ||||||| ||| || ||| ||||||| ||||||||||||||||||||    
T  37503705 ctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 37503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 20547958 - 20547901
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatata 158  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||    
T  20547958 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatata 20547901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 288833 - 288909
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||| |||||||| ||||||||||||||||||| || | | |||||| |||||| ||| |||||||||||||||||    
T  288833 cactatctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 13348095 - 13348019
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||||||| ||||||||||||||| ||||| | ||| |||||| ||| || ||||||||||||||| ||||||||    
T  13348095 tacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactcttt 13348019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 21217622 - 21217697
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  21217622 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 21217697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 37057018 - 37056943
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| ||||||||||| ||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  37057018 tacctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 37056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 8847213 - 8847289
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 178  Q
    |||||| ||||||||||  ||||||||||||||||| |||| ||| |||| | |||||| ||||||||||||||||||    
T  8847213 gtgccaatacctcattttatttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaataacacaa 8847289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 23592568 - 23592640
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || ||||||||||||||||||||    
T  23592568 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 7668154 - 7668072
Alignment:
Q  102 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    |||||||| || |||||||| | ||||||||| ||||||| ||| |||||| || ||| |||||||||||||||||| ||||||    
T  7668154 tgccactatcttatttcctt-gcaaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaattctttt 7668072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 25641551 - 25641465
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaa 187  Q
    |||||| ||||| |||| || ||||||| |||| ||||| | ||| |||||| ||| || ||||||||||||| |||||||||||||    
T  25641551 gtgccaataccttattttctatgtaaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataatacaactcttttaa 25641465  T

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Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 44445407 - 44445481
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    ||||||| |||| |||||||||| ||||||  ||| |||| | |||||| ||||||||||||||| |||||||||    
T  44445407 ctcattttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaataacataactctttt 44445481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 11630707 - 11630642
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 177  Q
    |||||| |||||||||||||| |||||| | |||||||||| ||| ||  ||||||||||||||||    
T  11630707 tcattttctttgtaaaattttaattgtctcaaaaattgtcatataaatgaatgttcaaataacaca 11630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 23600703 - 23600775
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    ||| |||||| |||| |||||||||| ||||| | ||| |||||| ||| || ||||||||||||||||||||    
T  23600703 tacntcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 39630577 - 39630504
Alignment:
Q  109 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||| |||| |||||||||||||||||||||   |||||| | | ||| |||||||||||||||||| ||||||    
T  39630577 acctaattttctttgtaaaattttgattgtcttaaaaattattatataaatagatgttcaaataacaaaactct 39630504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 41505598 - 41505634
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcac 141  Q
    ||||||||||||||||||||||||||||| |||||||    
T  41505598 cactacctcatttcctttgtaaaattttggttgtcac 41505634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 45000166 - 45000198
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttg 133  Q
    |||||||||||||||||||||||||||||||||    
T  45000166 gtgccactacctcatttcctttgtaaaattttg 45000198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 50318357 - 50318317
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcac 141  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  50318357 gtgccactatctcatttcctttgtaaaattttggttgtcac 50318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 3069642 - 3069612
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  3069642 aaatgatatttgtacaaccaatttgtgacaa 3069612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 20714246 - 20714276
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  20714246 aaatgatatttgtacaaccaatttgtgacaa 20714276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 32931986 - 32931956
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  32931986 aaatgatatttgtacaaccaatttgtgacaa 32931956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 36818959 - 36818989
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  36818959 aaatgatatttgtacaaccaatttgtgacaa 36818989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 42478086 - 42478145
Alignment:
Q  127 aattttgattgtcacgaaaattgtcagatatata--gatgttcaaataacacaactcttt 184  Q
    ||||||| ||||||| ||| || ||| |||||||  ||||||||||||||||||||||||    
T  42478086 aattttggttgtcacaaaagttatcatatatatatggatgttcaaataacacaactcttt 42478145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 42889088 - 42889168
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||| || ||||||| ||||||||||||||| || |  | ||| ||||||  || ||||||||| ||||||||||||||    
T  42889088 gtgccaataactcattttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacacaactc 42889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 18258761 - 18258678
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  18258761 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 18258678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 1671652 - 1671727
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  1671652 tacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 1671727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 26791212 - 26791130
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  26791212 gtgccactaactcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 26791130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 14923176 - 14923256
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||| |||||||||||||| || |||||||| |||||| |||||| |||||||||||||||||||||    
T  14923176 gtgccactacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaactc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 28306100 - 28306020
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  28306100 gtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 28306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 33037627 - 33037703
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  33037627 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 36739055 - 36739133
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||||||| |||||||||||||| ||||||| |||||| ||| |||||| |||||||||||||||||||||||    
T  36739055 cactacctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactctt 36739133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 41321365 - 41321438
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||| |||||||||||||||||    
T  41321365 tacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 13168625 - 13168704
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||  ||||| |||||||||||||    
T  13168625 gtgccactatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaact 13168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 1764328 - 1764406
Alignment:
Q  102 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||    
T  1764328 tgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 5168286 - 5168367
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||| ||||||||||||||  ||||||| ||| |||||| ||||||  |||||||||||||||||||||    
T  5168286 gtgccactacctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaactct 5168367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 7287153 - 7287077
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||| ||||||||||||||| ||||||| ||| |||||| ||||||  ||||||||||||||||||||    
T  7287153 cactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 7287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 28467417 - 28467337
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    |||| ||||||||||||| |||||||||| ||||||| |||||||||| ||||||  ||||||| ||||||||||||||||    
T  28467417 cactgcctcatttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactctttt 28467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 2972434 - 2972504
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 178  Q
    |||||||||||||| || |||||||||||||||| ||| |||||| ||||||| |||||||||||||||||    
T  2972434 tacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 14051283 - 14051202
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||| || ||| |||||| ||||||  ||||||||||||||    
T  14051283 gtgccactacctcattttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtttgaataacacaactct 14051202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 13309993 - 13310076
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaataa 191  Q
    |||||||||| |||||||||| |||||||||| | ||||||||||  || || |||||||||||||||||| ||||| ||||||    
T  13309993 tacctcattttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacacaattctttgaaataa 13310076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 39591793 - 39591871
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaat 189  Q
    ||||||| |||||||||| |||| ||||||| ||  |||||| ||| ||||||||||||||||||||||||||| ||||    
T  39591793 ctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactctttgaaat 39591871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 39592185 - 39592263
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaat 189  Q
    ||||||| |||||||||| |||| ||||||| ||  |||||| ||| ||||||||||||||||||||||||||| ||||    
T  39592185 ctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactctttgaaat 39592263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 8687001 - 8687082
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaat 189  Q
    |||||||||| |||||||||||||||||||| |  ||| |||||| ||||||  ||||||||||||||| |||||| |||||    
T  8687001 tacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacactactcttgtaaat 8687082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 15479579 - 15479652
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||  ||||||||||||| |||||||| ||| |||||| || ||| |||||||||||||||||||||    
T  15479579 tacctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaactc 15479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 7076536 - 7076464
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataa 173  Q
    |||||| ||| |||||||||||||||||||||| ||||||| ||| |||||| ||||||  ||||||||||||    
T  7076536 gtgccattacttcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 17626096 - 17626171
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  17626096 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 17626171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 35634789 - 35634722
Alignment:
Q  115 tttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||||| || |||  ||| |||||| |||||| ||||||||||||||||||||||    
T  35634789 tttcctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaactct 35634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 1274471 - 1274542
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||| |||||||||||||||| ||| ||  ||| |||||| |||||| |||||||||||||||||||||||    
T  1274471 ctcattccctttgtaaaattttggttg-cataaaagttgtcacatatatggatgttcaaataacacaactctt 1274542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 7552924 - 7552852
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||| ||||| ||||||||| ||||||| ||| ||||||  || || ||||||||||||||||||||||||    
T  7552924 tcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactcttt 7552852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 42175034 - 42175101
Alignment:
Q  113 catttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    |||||||||| ||||||||||| |||||  ||| ||| || |||||| ||||||||||||||||||||    
T  42175034 catttcctttataaaattttgactgtcataaaagttgacacatatatcgatgttcaaataacacaact 42175101  T

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Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 22972227 - 22972303
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||| |||| ||||||||||||||  ||||| | ||| |||| | ||| || ||||||||||||||||||||||||    
T  22972227 taccttattttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaactcttt 22972303  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 39054701 - 39054768
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaac 179  Q
    |||||| ||||| |||||||||||| |||| ||| ||||||  || || |||||||||||||||||||    
T  39054701 tcattttctttgcaaaattttgattatcacaaaagttgtcatctaaatggatgttcaaataacacaac 39054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 3263576 - 3263546
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  3263576 aaatgatatttgtacaaccaatttgtgacaa 3263546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 9594481 - 9594511
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  9594481 aaatgatatttgtacaaccaatttgtgacaa 9594511  T

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Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 9599796 - 9599766
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  9599796 aaatgatatttgtacaaccaatttgtgacaa 9599766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 12718448 - 12718418
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  12718448 aaatgatatttgtacaaccaatttgtgacaa 12718418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 12779674 - 12779644
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  12779674 aaatgatatttgtacaaccaatttgtgacaa 12779644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 30574445 - 30574415
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  30574445 aaatgatatttgtacaaccaatttgtgacaa 30574415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 1079920 - 1079880
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcac 141  Q
    |||||| |||||||||| |||||||||||||| ||||||||    
T  1079920 gtgccaatacctcattttctttgtaaaattttaattgtcac 1079880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 4088565 - 4088629
Alignment:
Q  119 ctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| | ||||||||||  |  |||||| | | ||||||||||||||||||||||||||    
T  4088565 ctttgtaaaaatatgattgtcacataggttgtcaaaaaaatagatgttcaaataacacaactctt 4088629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 35646490 - 35646526
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcac 141  Q
    ||||||||||||||||||||||||||||  |||||||    
T  35646490 cactacctcatttcctttgtaaaattttagttgtcac 35646526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 9207693 - 9207772
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  9207693 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaact 9207772  T

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Target: chr2; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 22888785 - 22888703
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  22888785 gtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 22888703  T

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Target: chr2; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 9760121 - 9760204
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||||||||||||||| | ||||||||| ||||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  9760121 gtgccactacctcatttccttggaaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaactcttt 9760204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 18254177 - 18254094
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  18254177 gtgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 18254094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 1248789 - 1248871
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| |||||| |||||| |||||||||||||||||||||||    
T  1248789 gtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaactctt 1248871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 43487486 - 43487564
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||| |||||| |||||||||||||||||||||||    
T  43487486 cactacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactctt 43487564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 6049313 - 6049236
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 178  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||    
T  6049313 gtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 42421866 - 42421783
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||||    
T  42421866 gtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttt 42421783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 9194344 - 9194428
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    |||||| ||||||||||| |||||||||||||| ||||||| |||||||| | ||||||  ||||||||||||||||||||||||    
T  9194344 gtgccattacctcatttcttttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaactctttt 9194428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 9990797 - 9990877
Alignment:
Q  104 ccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||| ||||||||||||||||||||| |||||||| ||| || ||| |||||| ||||||||||||||||||||||||    
T  9990797 ccactacttcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaactcttt 9990877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 32477442 - 32477520
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 186  Q
    ||||||||||||||||| |||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||||||    
T  32477442 tacctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctttta 32477520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 3838837 - 3838768
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||| ||| |||| ||| |||||| ||||||||||||||||||||||||||||    
T  3838837 tcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 42091468 - 42091393
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgt--cagatatatagatgttcaaataacacaa 178  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||  || |||||||||||||||||||||||||    
T  42091468 cactacctcgtttcctttgtaaaattttggttgtcacaaaaattgtcacatatatatagatgttcaaataacacaa 42091393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 2076679 - 2076754
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| || ||| |||||||||||||||||||||||    
T  2076679 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactctt 2076754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 34945058 - 34944979
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||  || ||||| ||||||||||    
T  34945058 gtgccactacctcatttcttttgtaaaattttggttgtcacgaaagttgtcacatatatgaatattcaattaacacaact 34944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 19633389 - 19633471
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtc-agatatatagatgttcaaataacacaactctttta 186  Q
    ||||||||||||||||||||||||||||||||||||| ||| || || | ||||||| |||||||||||| ||||||| ||||    
T  19633389 cactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactcgttta 19633471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 19830290 - 19830372
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtc-agatatatagatgttcaaataacacaactctttta 186  Q
    ||||||||||||||||||||||||||||||||||||| ||| || || | ||||||| |||||||||||| ||||||| ||||    
T  19830290 cactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactcgttta 19830372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 9647239 - 9647324
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaata 190  Q
    |||||| |||||||||||||||||||||| ||||||| ||| || ||  ||||||  ||||||||||||||||||||||| |||||    
T  9647239 cactacttcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaactctttaaaata 9647324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 41042367 - 41042440
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||||||||| |||||||||| ||||||  |||||||||| |||||| ||||||||||||||| ||||||||    
T  41042367 ctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaactcttt 41042440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 7698274 - 7698354
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||| ||||||||||||||||||| ||| |||| ||| || ||| || ||||||||||| |||||||||||||    
T  7698274 gtgccactacctaatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttctaataacacaactc 7698354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 8848654 - 8848583
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||| ||||| ||||||||||||||||| |||||| |||  || ||||||||||||||||||||||||||    
T  8848654 tcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaactctt 8848583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 21611615 - 21611540
Alignment:
Q  109 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||| ||||| |||||||||||||| ||||||  ||| |||||| |||||| ||||||||||||||||||||||||    
T  21611615 accttatttcatttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaactcttt 21611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 25270543 - 25270468
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||| ||||| ||||| |||||| ||| || |||||||||||||||||||||||    
T  25270543 tacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactctt 25270468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 37737929 - 37737858
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||| ||||| ||||||| ||| |||||| |||||| || |||||||||||||||||||    
T  37737929 ctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaactct 37737858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 41195697 - 41195768
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||||||||||||||||| ||||||| ||| |||| | ||||||  |||||||||||||||||||||    
T  41195697 ctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaactct 41195768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 17388571 - 17388531
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcac 141  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17388571 gtgccactacctcatttcctttgtaaaattttgattgtcac 17388531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 27490687 - 27490617
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||| ||||||||||||||||||||||| ||| ||||||   | || ||||||||||||||||||||||    
T  27490687 tcattttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactct 27490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 3097819 - 3097747
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    ||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  3097819 ctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 3097747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 41056708 - 41056636
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || ||||||||||||||||||||    
T  41056708 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 41056636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 13333127 - 13333056
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  13333127 tcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactctt 13333056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 6511358 - 6511394
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcac 141  Q
    |||||||||||||||||| ||||||||||||||||||    
T  6511358 cactacctcatttcctttataaaattttgattgtcac 6511394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 44287410 - 44287370
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcac 141  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  44287410 gtgccacaacctcatttcctttgtaaaattttggttgtcac 44287370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 42434247 - 42434302
Alignment:
Q  126 aaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||| ||| | ||| |||||| ||| ||||||||||||||||||||||||    
T  42434247 aaattttgatcgtctcaaaagttgtcatataaatagatgttcaaataacacaactc 42434302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 18846733 - 18846795
Alignment:
Q  120 tttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||| ||||||||||||||||  ||||||||||  || || ||||||||||||||| ||||||    
T  18846733 tttgcaaaattttgattgtcataaaaattgtcatctaaatggatgttcaaataacataactct 18846795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 25801870 - 25801840
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  25801870 aaatgatatttgtacaaccaatttgtgacaa 25801840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 29349622 - 29349688
Alignment:
Q  114 atttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    |||| ||||||||||||||||||||||| ||| ||||||  || || |||||| |||||||| ||||    
T  29349622 attttctttgtaaaattttgattgtcacaaaagttgtcatctaaatggatgttgaaataacataact 29349688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 30487537 - 30487507
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  30487537 aaatgatatttgtacaaccaatttgtgacaa 30487507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 34144619 - 34144589
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  34144619 aaatgatatttgtacaaccaatttgtgacaa 34144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 37966370 - 37966400
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  37966370 aaatgatatttgtacaaccaatttgtgacaa 37966400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 22416316 - 22416356
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcac 141  Q
    |||||||| |||||||| ||||||||||||||| |||||||    
T  22416316 gtgccactgcctcattttctttgtaaaattttggttgtcac 22416356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 22416350 - 22416386
Alignment:
Q  147 ttgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||| |||||| |||||||||||||||||||||||    
T  22416350 ttgtcacatatatggatgttcaaataacacaactctt 22416386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 1e-27; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 27465025 - 27464943
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  27465025 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 27464943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 45333818 - 45333891
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 178  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||||||    
T  45333818 cactacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataacacaa 45333891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 26469466 - 26469542
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  26469466 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 48470742 - 48470822
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||| || ||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  48470742 gtgccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 649876 - 649955
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||| | ||||||||||||||||||||||||    
T  649876 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaactcttt 649955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 31088284 - 31088366
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||||||||||  |||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  31088284 gtgccactacctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 31088366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 45121448 - 45121367
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  45121448 gtgccactac-tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 45121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 44914536 - 44914459
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcac-gaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||| |||||| |||||||||||||||||||||    
T  44914536 cactacctcatttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 50726216 - 50726136
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||| ||||| ||||||||| ||||||| |||||| ||| |||||| |||||||||||||||||||||    
T  50726216 gtgccactacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 50726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 23645514 - 23645597
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||| | ||||||  |||||||||||||| ||||||||    
T  23645514 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaataacataactcttt 23645597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 37274997 - 37274918
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||| || ||  ||||||||||||||||||||||||    
T  37274997 cactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactcttt 37274918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 19055717 - 19055643
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    ||||||||||||||||||||||  ||||||| ||| |||||| |||||| |||||||||||||||||||||||||    
T  19055717 ctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctttt 19055643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 33100915 - 33100992
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||    
T  33100915 cactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactct 33100992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 8350162 - 8350087
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||| |||||||||||||| ||||| ||||||||||| |||||| |||||| |||||||||||||||||||||    
T  8350162 cactaccttatttcctttgtaaa-ttttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 8350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 35369807 - 35369879
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 177  Q
    |||||||||||||||||| |||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||    
T  35369807 cactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 44519112 - 44519039
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||||||||||| || |||| ||| |||||| ||||||  ||||||||||||||||||||    
T  44519112 tacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 30735256 - 30735180
Alignment:
Q  106 actacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||||||| |||| |||||||||||||||||| |||||| ||| ||| || ||| ||||||||||||||||||    
T  30735256 actacctcatttactttataaaattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactct 30735180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 37619647 - 37619727
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||| |||||||||||||||||||||||||| |||| |  ||| |||||| |||||| ||||||||||||||| |||||    
T  37619647 gtgccaatacctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataacataactc 37619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 45640405 - 45640488
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    |||||| || |||||||| |||||||||||||| |||  || ||| |||||| ||||||||||||||||||||||||||||||||    
T  45640405 gtgccaatatctcatttc-tttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaactctttt 45640488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 15470019 - 15469945
Alignment:
Q  106 actacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||| ||||||||| |||||||| |||||| ||| ||||||  ||||||||||||||||||||    
T  15470019 actacctcatttcctttataaaattttaattgtcac-aaaattatcacatatatgaatgttcaaataacacaactc 15469945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 21401508 - 21401583
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| ||||||||||||||||||||  | ||| |||||| ||| || |||||||||||||||||||||||    
T  21401508 tacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactctt 21401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 50932414 - 50932481
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 175  Q
    |||||||||||||||||||||||||| |||| || ||| |||||| |||||| |||||||||||||||    
T  50932414 tacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 3851265 - 3851335
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 175  Q
    |||||||||||||||||| |||||||||| ||||||  ||| |||||| |||||| |||||||||||||||    
T  3851265 cactacctcatttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 3981984 - 3981914
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||| ||||||||||||||||||||||| ||  |||||| || ||| |||||||||||||||||||||    
T  3981984 ctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaactc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 37685436 - 37685517
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 186  Q
    |||||||||||||| ||||||||||||| |||||||| |||||| ||| || |||  |||||||||||||| ||||| ||||    
T  37685436 cactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactcattta 37685517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 37700082 - 37700001
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 186  Q
    |||||||||||||| ||||||||||||| |||||||| |||||| ||| || |||  |||||||||||||| ||||| ||||    
T  37700082 cactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactcattta 37700001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 40861230 - 40861154
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 177  Q
    ||||||||| || ||||||||| |||||||||  ||||||| ||| ||| || ||||||||||||||||||||||||    
T  40861230 gtgccactatcttatttcctttataaaattttagttgtcacaaaagttgacacatatatagatgttcaaataacaca 40861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 43775319 - 43775399
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaataa 191  Q
    ||||||| ||||||||||||||||||||||  ||| |||||| ||||||  || |||||||||||||| |||||| |||||    
T  43775319 ctcattttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaagtctttttaataa 43775399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 18434898 - 18434981
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||| ||| |||||| ||||| ||||||||| ||||||| ||| ||||||  || |||||| ||||||||||||||||||||    
T  18434898 gtgccaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaactcttt 18434981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 46907305 - 46907380
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||||||||| | ||| |||||  ||| || |||||||||||||||||||||||    
T  46907305 tacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactctt 46907380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 52576263 - 52576188
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatat-agatgttcaaataacacaactct 182  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||  ||||| |  ||||||||||||||||||||    
T  52576263 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaactct 52576188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 2571742 - 2571824
Alignment:
Q  105 cactacctcatttcctttgt-aaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 186  Q
    ||||||||||||| |||||| ||||||||| ||||||| ||| |||||| ||  || ||||||||||||||||||||| ||||    
T  2571742 cactacctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaactcgttta 2571824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 186
Target Start/End: Original strand, 50149060 - 50149134
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 186  Q
    |||||| ||||||||||||||||||||  | ||| |||||| ||| |  ||||||||||||||||||||||||||    
T  50149060 tcattttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaactctttta 50149134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 49065332 - 49065253
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    |||||| ||| |||||| ||||||||||||||| || ||   |||||||||| ||| |||||| ||||||||||||||||    
T  49065332 gtgccaatacttcattttctttgtaaaattttggttatctttaaaattgtcatataaatagatattcaaataacacaact 49065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 3159479 - 3159516
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgt 138  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  3159479 gtgccactacctcatttcctttgtaaaattttggttgt 3159516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 19947705 - 19947632
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||| ||| |||| |||||||||| ||||| | ||| |||||| ||| ||| ||||||||||||||||||||    
T  19947705 tacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactc 19947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 30467483 - 30467419
Alignment:
Q  119 ctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||  ||||||| ||| |||||| |||  |||||||||||||||||||||||||    
T  30467483 ctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaactctt 30467419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 48103330 - 48103250
Alignment:
Q  102 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatg-ttcaaataacacaactc 181  Q
    ||||| ||||| |||| ||||||||||||||| ||||| | ||| |||||| ||| ||||||| |||||||| ||||||||    
T  48103330 tgccaataccttattttctttgtaaaattttggttgtctcaaaagttgtcatataaatagatgtttcaaatatcacaactc 48103250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 31827064 - 31827135
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||  |||||||||||||| ||||  | ||| ||||||  || |||||||||||||||||||||||||    
T  31827064 ctcattttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaactct 31827135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 4776859 - 4776909
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtc 151  Q
    |||||||||||||||||||||| ||||||||  |||||||| ||| |||||    
T  4776859 gtgccactacctcatttcctttataaaatttaaattgtcacaaaagttgtc 4776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 13813561 - 13813591
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  13813561 aaatgatatttgtacaaccaatttgtgacaa 13813591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 185
Target Start/End: Complemental strand, 41677258 - 41677220
Alignment:
Q  147 ttgtcagatatatagatgttcaaataacacaactctttt 185  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  41677258 ttgtcacatatatggatgttcaaataacacaactctttt 41677220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 6693267 - 6693300
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcac 141  Q
    ||||||||||||||||||||||||||||| ||||    
T  6693267 tacctcatttcctttgtaaaattttgattatcac 6693300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 12657329 - 12657366
Alignment:
Q  104 ccactacctcatttcctttgtaaaattttgattgtcac 141  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  12657329 ccactacctcatttcctttataaaattttggttgtcac 12657366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 18512304 - 18512227
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    |||||||||| |||| |||||||||  |||||   |||||| ||| ||| || |||||| ||||||||||||||||||    
T  18512304 tacctcattttctttataaaattttagttgtcttaaaaattatcatataaattgatgttgaaataacacaactctttt 18512227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 26207955 - 26208024
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||| ||||| |||||||||||| |||| ||| || | |  || ||||||||||||||||||||||||    
T  26207955 tcattttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaactc 26208024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 30570645 - 30570706
Alignment:
Q  119 ctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    ||||||||||||||||||||  | |||||| ||| ||| ||  |||||||||||||||||||    
T  30570645 ctttgtaaaattttgattgtttcaaaaattatcatataaatgaatgttcaaataacacaact 30570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 36439660 - 36439688
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgac 29  Q
    |||||||||||||||||||||||||||||    
T  36439660 aaatgatatttgtacaaccaatttgtgac 36439688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 50333337 - 50333397
Alignment:
Q  127 aattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaa 187  Q
    ||||||| ||||||| ||| |||||| |||||| |||| | ||||||||||| ||||||||    
T  50333337 aattttggttgtcacaaaagttgtcacatatatggatggttaaataacacaattcttttaa 50333397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 8775 - 8855
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 185  Q
    ||||||||||||||||||||||||||||| ||||||  ||| ||||||||||||| |||||||||||||||||||||||||    
T  8775 cactacctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactctttt 8855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 38956586 - 38956506
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  38956586 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 32529820 - 32529745
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||    
T  32529820 cactacctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaact 32529745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 44895540 - 44895460
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||| | |||||| ||||||||||||||| |||||    
T  44895540 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacataactc 44895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 3937091 - 3937008
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||| ||||||||||||||| |||||||||| ||||||| ||| |||||| || ||| ||||||||||||||||||||||||    
T  3937091 gtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactcttt 3937008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 24614280 - 24614203
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||||||||||||||||||||||||||| |||| ||| || ||| ||||||  |||||||||||||||||||||    
T  24614280 cactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactct 24614203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 40112922 - 40112841
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||||||| |||||||||||||||||||||||||||   || |||| | |||||| ||||||||||||||||||||||    
T  40112922 gtgccactaccttatttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaataacacaactct 40112841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 43025443 - 43025524
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||| ||||||||||||||||||||||  |||| || ||| |||||| |||||||||||||| ||||||||||||||    
T  43025443 gtgccactatctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaactct 43025524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 22918137 - 22918057
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| |||||| || ||| |||| |||||||| |||||||    
T  22918137 gtgccactacctcatttcctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaataatacaactc 22918057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 43942743 - 43942818
Alignment:
Q  109 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||| ||||||||||||||| ||| ||| |||||| ||| |||||| ||||||||||||||||||||||||    
T  43942743 acctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactcttt 43942818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 41189504 - 41189428
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatata--gatgttcaaataacacaactct 182  Q
    |||||||||||||||||||||||||||||||||  ||| || ||| |||||||   |||||||||||||||||||||    
T  41189504 tacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaactct 41189428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 25192881 - 25192802
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||||||| ||||||||||||||  ||||||| ||| |||||| || |||  || ||||||||||||||||||||    
T  25192881 cactacctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactcttt 25192802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 41989710 - 41989628
Alignment:
Q  101 gtgccactacctcatttccttt--gtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||  |||  ||||||||||| ||||||| ||| || ||| |||||| |||||||||||||||||||||    
T  41989710 gtgccactacctcattttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 41989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 46022228 - 46022153
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  46022228 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 46022153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 40417884 - 40417957
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||| || ||||||||||||||| ||||| | ||| |||||  ||| ||||||||||||||||||||||||    
T  40417884 tacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactc 40417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 45851164 - 45851095
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||||||  ||||||  |||||||| | | |||| |||||||||||||||||||||    
T  45851164 tcatttcctttgtaaaattttagttgtcaaaaaaattgtgacagatatggatgttcaaataacacaactc 45851095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 7701654 - 7701729
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| ||||| |||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  7701654 tacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 7701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 31445431 - 31445502
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||| ||||||||||||||||||||  | |||||| ||| ||| |  ||||||||||||||||||||||    
T  31445431 ctcattttctttgtaaaattttgattgttgcaaaaattatcatataaaatgatgttcaaataacacaactct 31445502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 38073323 - 38073363
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcac 141  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  38073323 gtgccaatacctcatttcctttgtaaaattttggttgtcac 38073363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 38861199 - 38861239
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcac 141  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  38861199 gtgccactaccttatttactttgtaaaattttgattgtcac 38861239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 46578103 - 46578023
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||| |||||| |||| ||| |||||||||| ||||||   ||||| ||| |||||| ||||||||||||| |||||||    
T  46578103 gtgccaatacctcgtttcttttataaaattttggttgtcatagaaattatcacatatatggatgttcaaataagacaactc 46578023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 25200427 - 25200397
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  25200427 aaatgatatttgtacaaccaatttgtgacaa 25200397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 30864485 - 30864455
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  30864485 aaatgatatttgtacaaccaatttgtgacaa 30864455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 31274597 - 31274567
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  31274597 aaatgatatttgtacaaccaatttgtgacaa 31274567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 37325887 - 37325857
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  37325887 aaatgatatttgtacaaccaatttgtgacaa 37325857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 552896 - 552976
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  552896 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 14818035 - 14818115
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||| ||||||||||||||||||||    
T  14818035 gtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaactc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 33430326 - 33430247
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||||  |||| ||||||||||||||||||    
T  33430326 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaactcttt 33430247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 15974716 - 15974794
Alignment:
Q  106 actacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||| | |||||| ||||||||||||||||||||||||    
T  15974716 actacttcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaactcttt 15974794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 32316889 - 32316815
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||    
T  32316889 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 32316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 1156823 - 1156904
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    ||||||||| ||||||||||||  ||||||||||||||||| ||| || ||| |||||| ||||||||||||||||||||||    
T  1156823 gtgccactatctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactct 1156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 11612298 - 11612370
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 180  Q
    |||||||||| |||||||||||||||||| |||| |||||| ||| ||||||| || ||||||||||||||||    
T  11612298 tacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaact 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 13689955 - 13689882
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||| |||||||||  |||||   |||||||||| |||||| |||||||||||||||||||||    
T  13689955 tacctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 18737528 - 18737460
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacac 176  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| ||| || ||||||||||||||||    
T  18737528 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacac 18737460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 26595459 - 26595535
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||||||| ||||||||||||||| ||||  | ||| |||||| ||| || ||||||||||||||||||||||||    
T  26595459 tacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactcttt 26595535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 31077901 - 31077977
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||| |||||||||||||||||| ||||||| ||| |||||| || |||  || |||||||||||||||||    
T  31077901 cactacctcacttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 16199560 - 16199635
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  16199560 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 16199635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 34047490 - 34047573
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||| || ||| ||| ||||||||||||||| ||||||| ||| |||||| || ||| ||||||||||||||| ||||||||    
T  34047490 gtgccaatatctctttttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaactcttt 34047573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 4820479 - 4820552
Alignment:
Q  110 cctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 183  Q
    |||||||| ||||||||||||||||||||| | ||| || |||  || |||| |||||||||||||||||||||    
T  4820479 cctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactctt 4820552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 5694112 - 5694039
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||||||||||||||||||||| | ||||| | ||| |||||| ||| ||  ||||| ||||||||||||||    
T  5694112 tacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaactc 5694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 2056786 - 2056816
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  2056786 aaatgatatttgtacaaccaatttgtgacaa 2056816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 9954551 - 9954581
Alignment:
Q  1 aaatgatatttgtacaaccaatttgtgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  9954551 aaatgatatttgtacaaccaatttgtgacaa 9954581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 277105 - 277174
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||| ||||||||||||||| ||||||| ||||||||||  || |   ||||| ||||||||||||||    
T  277105 tcattttctttgtaaaattttggttgtcacaaaaattgtcatctaaaggaatgtttaaataacacaactc 277174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 22079520 - 22079451
Alignment:
Q  112 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    |||||| ||||| ||||||||| ||||||| ||| | ||||  || || |||||||||||||||||||||    
T  22079520 tcattttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaactc 22079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 24900887 - 24900960
Alignment:
Q  111 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||| |||||||||||||| |||||  | ||  |||||| ||| |  ||||||||||||||||||||||||    
T  24900887 ctcattttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacacaactcttt 24900960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 133
Target Start/End: Complemental strand, 5080531 - 5080503
Alignment:
Q  105 cactacctcatttcctttgtaaaattttg 133  Q
    |||||||||||||||||||||||||||||    
T  5080531 cactacctcatttcctttgtaaaattttg 5080503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 76587 - 76504
Alignment:
Q  101 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||| |||||||||||||||||    
T  76587 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaactcttt 76504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 49402 - 49478
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 181  Q
    ||||||||||||||||||||||||||||| || |||| ||| |||||| |||||| ||||||||||||||| |||||    
T  49402 cactacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataacataactc 49478  T

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Target: scaffold0519 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 11892 - 11966
Alignment:
Q  108 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 182  Q
    |||||||||| ||||||||||||||| | ||||| ||| |||||| || ||||||||||||||||| ||||||||    
T  11892 tacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11966  T

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Target: scaffold0067 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 35630 - 35666
Alignment:
Q  105 cactacctcatttcctttgtaaaattttgattgtcac 141  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35630 cactacctcattttctttgtaaaattttgattgtcac 35666  T

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Target: scaffold0148 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 20845 - 20786
Alignment:
Q  125 aaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 184  Q
    |||||||||||| |||| |||||| |||  || || ||||||||||||||||||||||||    
T  20845 aaaattttgattatcacaaaaattatcatttaaatggatgttcaaataacacaactcttt 20786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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