View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18693_high_15 (Length: 407)

Name: NF18693_high_15
Description: NF18693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18693_high_15
NF18693_high_15
[»] chr7 (3 HSPs)
chr7 (6-394)||(40077460-40077843)
chr7 (150-257)||(41870514-41870621)
chr7 (150-227)||(5362334-5362411)
[»] chr6 (3 HSPs)
chr6 (150-257)||(10067660-10067766)
chr6 (150-227)||(25085024-25085101)
chr6 (150-223)||(31142010-31142083)
[»] chr4 (10 HSPs)
chr4 (150-227)||(17381489-17381566)
chr4 (150-257)||(51150901-51151007)
chr4 (150-227)||(45615723-45615800)
chr4 (150-257)||(51234402-51234508)
chr4 (150-227)||(13834417-13834494)
chr4 (150-224)||(8170900-8170974)
chr4 (150-228)||(30623531-30623609)
chr4 (150-228)||(38932756-38932834)
chr4 (159-228)||(4161831-4161900)
chr4 (159-224)||(8755912-8755977)
[»] chr3 (4 HSPs)
chr3 (150-257)||(34979115-34979221)
chr3 (150-224)||(14984499-14984573)
chr3 (155-201)||(54558391-54558437)
chr3 (150-227)||(47199900-47199977)
[»] chr2 (4 HSPs)
chr2 (150-204)||(43191854-43191908)
chr2 (150-219)||(15301526-15301595)
chr2 (161-227)||(21603501-21603567)
chr2 (150-274)||(19206441-19206565)
[»] chr1 (6 HSPs)
chr1 (150-204)||(8069075-8069129)
chr1 (208-274)||(2262149-2262215)
chr1 (211-257)||(48701717-48701762)
chr1 (150-223)||(26421470-26421543)
chr1 (151-224)||(32743270-32743343)
chr1 (150-202)||(6541119-6541171)
[»] chr8 (3 HSPs)
chr8 (150-202)||(1249216-1249268)
chr8 (150-228)||(4493035-4493113)
chr8 (150-223)||(21602115-21602188)
[»] chr5 (4 HSPs)
chr5 (172-267)||(3599845-3599940)
chr5 (155-220)||(917102-917167)
chr5 (209-257)||(24444394-24444441)
chr5 (150-202)||(27769885-27769937)
[»] scaffold0022 (1 HSPs)
scaffold0022 (207-257)||(82886-82935)


Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 6 - 394
Target Start/End: Original strand, 40077460 - 40077843
Alignment:
Q  6 atgttctatcttcaagacactctttaacatttattcttcaatcgaattaatcttatgttggttttatcaatttatgggcaatccatttttaaatggtaga 105  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40077460 atgttctatcttcaagacacactttaacatttattcttcaatcgaattaatcttatgttggttttatcaatttatgtgcaatccatttttaaatggtaga 40077559  T
Q  106 ttcacattttatttataagcgtgttgattcgtgttaatgggacgataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatc 205  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||| |     
T  40077560 ttcacattttatttataagcgtgttgattcgtattaatgtgacgataaataaatatattgaagtactaatataacaatattaacaaaatattttaatgtt 40077659  T
Q  206 ggagactattttgattaacaaaaatacacaattagatactattttaaaatttaatacattaaatgactactgattaaacattgagagaccaaaacgaata 305  Q
     ||||||||||| |||||  |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||||| || ||    
T  40077660 agagactattttaattaa-taaaatatacaattagatattattttaaaatttaatacattgaatgactactgattagacattcagataccaaaaagacta 40077758  T
Q  306 ttacctctaaaactaatggtttcaatgtagaaaccgttaaatttgtgaagctactctaccactaccaagtttccttattatattattct 394  Q
    ||||||||||||||||    ||  |  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40077759 ttacctctaaaactaa----ttatacattgaaaccgttaaatttgtgaagctactctaccactaccaagcttccttattatattattct 40077843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 41870621 - 41870514
Alignment:
Q  150 ataagtaaatatattgaa-gtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaaaatacacaattagatactatt 248  Q
    ||||||||||||||| || ||||| |||| ||||||| |   ||| |||||||||| ||||||| |||||| |||||||| ||||||||| ||  |||||    
T  41870621 ataagtaaatatattaaaagtattgatatgacaatattagtgaaacattttaatattggagactgttttgactaacaaaa-tacacaatttgagtctatt 41870523  T
Q  249 ttaaaattt 257  Q
    |||||||||    
T  41870522 ttaaaattt 41870514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 5362411 - 5362334
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaa 227  Q
    |||| ||| |||||||||| | |||||| || |||| ||| || |||||||||||| | ||||||||||| |||||||    
T  5362411 ataaataagtatattgaaggactaatatgaccatattaacgaagtattttaatatcagggactattttgactaacaaa 5362334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 10067660 - 10067766
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaaaatacacaattagatactattt 249  Q
    |||||||| |||||||||  | |||||| ||||||| |||||| ||||||||| || |||||||||||||||||| |||||||||||| ||| |||||||    
T  10067660 ataagtaagtatattgaatgactaatatgacaatattaacaaagtattttaatgtcagagactattttgattaac-aaaatacacaatcagagactattt 10067758  T
Q  250 taaaattt 257  Q
    ||||||||    
T  10067759 taaaattt 10067766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 25085024 - 25085101
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaa 227  Q
    |||||||| |||||||||  | |||||| ||||||| |||||| ||||||||| |   |||||||||||| |||||||    
T  25085024 ataagtaagtatattgaaagaataatatgacaatattaacaaattattttaatgttaaagactattttgactaacaaa 25085101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 31142083 - 31142010
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaa 223  Q
    ||||||||||||||||||||| | |||| ||||||| ||  || ||||||||||||   |||||| ||||||||    
T  31142083 ataagtaaatatattgaagtactgatatgacaatattaatgaagtattttaatatcatggactatattgattaa 31142010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 17381489 - 17381566
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaa 227  Q
    |||||||| |||||||||| | |||||| ||||||| ||| |||||||||||||||   |||||||||||||||||||    
T  17381489 ataagtaagtatattgaaggactaatatgacaatattaacgaaatattttaatatcaaggactattttgattaacaaa 17381566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 51151007 - 51150901
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaaaatacacaattagatactattt 249  Q
    |||||||| |||||||||||| |||||| ||||||| |||||||||||||||| |  | ||||||||| | |||| ||||| |||||| |   |||||||    
T  51151007 ataagtaagtatattgaagtactaatatgacaatattaacaaaatattttaatgttagggactattttcactaac-aaaatgcacaatcacgaactattt 51150909  T
Q  250 taaaattt 257  Q
    ||||||||    
T  51150908 taaaattt 51150901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 45615723 - 45615800
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaa 227  Q
    |||||||| |||||||||| | ||| || ||||||| |||||| |||||||||||  ||||||||||||| |||||||    
T  45615723 ataagtaagtatattgaaggactaaaatgacaatattaacaaattattttaatattagagactattttgactaacaaa 45615800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 51234402 - 51234508
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaaaatacacaattagatactattt 249  Q
    |||||||| |||||||||   ||||||| ||||||| || |||| ||||||| ||| ||||||||||||| ||||  |||| || | ||||| |||||||    
T  51234402 ataagtaagtatattgaaagtttaatatgacaatattaataaaacattttaacatcagagactattttgactaac-gaaatgcatagttagagactattt 51234500  T
Q  250 taaaattt 257  Q
    ||||||||    
T  51234501 taaaattt 51234508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 13834494 - 13834417
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaa 227  Q
    |||||||| |||||||||| | |||||| ||||||| |||||| ||||||||| |   |||||||||||| |||||||    
T  13834494 ataagtaagtatattgaaggactaatatgacaatattaacaaattattttaatgttaaagactattttgactaacaaa 13834417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 8170900 - 8170974
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaac 224  Q
    |||||||| |||||||||||| |||||| ||||||| ||  ||| ||||||||||  |||| |||||||| ||||    
T  8170900 ataagtaagtatattgaagtactaatatgacaatattaatgaaacattttaatattagagattattttgactaac 8170974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 30623609 - 30623531
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaaa 228  Q
    ||||||||||||||||||| | || ||||||||||| |   ||| ||||||| ||| ||||| ||||| ||||||||||    
T  30623609 ataagtaaatatattgaaggactagtataacaatattagtgaaacattttaacatcagagacaattttaattaacaaaa 30623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 38932756 - 38932834
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaaa 228  Q
    |||| ||| |||||||||| | |||||| ||||||| ||  |||||||||||| |  ||||||||||||| ||||||||    
T  38932756 ataaataagtatattgaaggactaatatgacaatattaatgaaatattttaatgttagagactattttgactaacaaaa 38932834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 4161831 - 4161900
Alignment:
Q  159 tatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaaa 228  Q
    |||||||||| | |||||| ||||||| ||  ||| |||||||||||  |||||||||||| ||||||||    
T  4161831 tatattgaagaactaatatgacaatattaatgaaacattttaatatcatagactattttgactaacaaaa 4161900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 8755912 - 8755977
Alignment:
Q  159 tatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaac 224  Q
    |||||| ||| |||||||| ||||||| ||| || ||||||||| |  ||||||||||||||||||    
T  8755912 tatattaaaggattaatatgacaatattaacgaagtattttaatgttagagactattttgattaac 8755977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 34979115 - 34979221
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaaaatacacaattagatactattt 249  Q
    |||||||| |||||||||  | |||||| | ||||| ||| |||||||||||| |  ||||||||||||| |||| ||||| |||||||| | |||||||    
T  34979115 ataagtaagtatattgaatgactaatatgataatattaacgaaatattttaatgtgagagactattttgactaac-aaaatgcacaattaaaaactattt 34979213  T
Q  250 taaaattt 257  Q
    ||||||||    
T  34979214 taaaattt 34979221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 14984573 - 14984499
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaac 224  Q
    ||||| || |||||||||| |||||||| ||||||| ||| |||||||||||| || |  |||||||||| ||||    
T  14984573 ataagcaagtatattgaaggattaatatgacaatattaacgaaatattttaatgtcaggaactattttgactaac 14984499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 54558391 - 54558437
Alignment:
Q  155 taaatatattgaagtattaatataacaatataaacaaaatattttaa 201  Q
    |||||||||||||  |||||||||||||||| ||| |||||||||||    
T  54558391 taaatatattgaatgattaatataacaatattaacgaaatattttaa 54558437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 47199900 - 47199977
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaa 227  Q
    ||||||||||||||||||  ||| |||| | ||||| ||  ||  |||||||||||||| |||||||||| |||||||    
T  47199900 ataagtaaatatattgaatgattgatatgataatattaatgaagcattttaatatcggaaactattttgactaacaaa 47199977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 43191908 - 43191854
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatat 204  Q
    |||||||||||||||| || | |||||||||||||| ||| ||||||||||||||    
T  43191908 ataagtaaatatattggaggactaatataacaatattaacgaaatattttaatat 43191854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 15301526 - 15301595
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttga 219  Q
    |||||||| |||||||||||| |||||  ||||||| ||| || ||||||||| || |||||||||||||    
T  15301526 ataagtaagtatattgaagtactaataagacaatattaacgaagtattttaatgtcagagactattttga 15301595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 21603567 - 21603501
Alignment:
Q  161 tattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaa 227  Q
    |||||||| | ||| || ||||||| ||| |||||||||||||||  |||||||||||| |||||||    
T  21603567 tattgaagaactaacatgacaatattaacgaaatattttaatatcaaagactattttgactaacaaa 21603501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 274
Target Start/End: Original strand, 19206441 - 19206565
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaaaatacacaattagatactattt 249  Q
    ||||||||||||||||||| | |||||  ||||||| || || | || |||| ||| |||| |||||||| |||| ||| | || ||| ||| |||||||    
T  19206441 ataagtaaatatattgaaggactaataagacaatattaataatacatcttaacatcagagaatattttgactaac-aaagtgcataatcagaaactattt 19206539  T
Q  250 taaaa-tttaatacattaaatgacta 274  Q
    ||||| ||| |||||||||| |||||    
T  19206540 taaaattttgatacattaaaggacta 19206565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 8069075 - 8069129
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatat 204  Q
    |||||||| |||||||| | |||||||| ||||||| ||||||||||||||||||    
T  8069075 ataagtaagtatattgatggattaatatgacaatattaacaaaatattttaatat 8069129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 2262149 - 2262215
Alignment:
Q  208 agactattttgattaacaaaaatacacaattagatactattttaaaattt-aatacattaaatgacta 274  Q
    |||||||||| ||||| |||| | || ||||||||||||||||||||||| ||||||||||| |||||    
T  2262149 agactattttaattaataaaa-tgcataattagatactattttaaaatttcaatacattaaaggacta 2262215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 48701717 - 48701762
Alignment:
Q  211 ctattttgattaacaaaaatacacaattagatactattttaaaattt 257  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||    
T  48701717 ctattttgactaacaaaa-tacataattagatactattttaaaattt 48701762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 26421470 - 26421543
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaa 223  Q
    |||| ||||||||| |||| | |||||||||||||| ||| | |||||||||||   |||| ||||||||||||    
T  26421470 ataaataaatatatcgaagaaataatataacaatattaacgagatattttaatactagagattattttgattaa 26421543  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 32743270 - 32743343
Alignment:
Q  151 taagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaac 224  Q
    ||||||| |||||||||  |||||||||| ||||| | | |||||||||||| || |||| |||||||| ||||    
T  32743270 taagtaagtatattgaatgattaatataagaatattagcgaaatattttaatgtcagagattattttgactaac 32743343  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 6541171 - 6541119
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaat 202  Q
    |||||||| |||||||||| | |||||| ||||||| ||| ||||||||||||    
T  6541171 ataagtaagtatattgaaggactaatatgacaatattaacgaaatattttaat 6541119  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 1249216 - 1249268
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaat 202  Q
    ||||||||||||||||||||| | |||| ||| ||| ||||||||||||||||    
T  1249216 ataagtaaatatattgaagtactgatatgacagtattaacaaaatattttaat 1249268  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 4493113 - 4493035
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaacaaaa 228  Q
    |||| |||||||||||||| | ||||| | |||||| |||||| ||||||||| ||   ||||||||||||||| ||||    
T  4493113 ataaataaatatattgaaggactaataaagcaatattaacaaagtattttaatgtcaatgactattttgattaataaaa 4493035  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 21602115 - 21602188
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgattaa 223  Q
    |||||| | |||||||||| | |||||| ||||||| ||| || ||||||||| || | |||||||||||||||    
T  21602115 ataagttagtatattgaaggactaatatgacaatattaacgaattattttaatgtcagggactattttgattaa 21602188  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 3599940 - 3599845
Alignment:
Q  172 taatataacaatataaacaaaatattttaatatcggagactattttgattaacaaaaatacacaattagatactattttaaaattt-aatacattaa 267  Q
    |||||| |||||||  || |||||||||||  |  ||||| |||||||||||| |||||||||||| | | ||||||||||||||| ||||||||||    
T  3599940 taatatgacaatatttacgaaatattttaacgtgagagaccattttgattaac-aaaatacacaatcaaacactattttaaaatttcaatacattaa 3599845  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 917102 - 917167
Alignment:
Q  155 taaatatattgaagtattaatataacaatataaacaaaatattttaatatcggagactattttgat 220  Q
    |||||||||||||  | |||||| ||||||| |||||||||||||| | |  ||||||||||||||    
T  917102 taaatatattgaatgactaatatgacaatattaacaaaatattttattgtgagagactattttgat 917167  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 24444394 - 24444441
Alignment:
Q  209 gactattttgattaacaaaaatacacaattagatactattttaaaattt 257  Q
    |||||||||||||||| |||||||||||| | |||| ||||||||||||    
T  24444394 gactattttgattaac-aaaatacacaatcaaataccattttaaaattt 24444441  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 27769937 - 27769885
Alignment:
Q  150 ataagtaaatatattgaagtattaatataacaatataaacaaaatattttaat 202  Q
    |||||||| ||||||||||  ||||||| ||||||| || |||||||||||||    
T  27769937 ataagtaagtatattgaagagttaatatgacaatattaataaaatattttaat 27769885  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 82935 - 82886
Alignment:
Q  207 gagactattttgattaacaaaaatacacaattagatactattttaaaattt 257  Q
    |||||||||||||||||| |||||| ||||| ||||||||||||| |||||    
T  82935 gagactattttgattaac-aaaatatacaatcagatactattttagaattt 82886  T

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