View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18693_low_23 (Length: 352)
Name: NF18693_low_23
Description: NF18693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18693_low_23 |
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Alignment Details
Target: chr6 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 11 - 336
Target Start/End: Complemental strand, 28600510 - 28600185
Alignment:
| Q |
11 |
aagaatattaaatatgatccaaattcatgcatttatacatatttacatggctctaaagtatagctgcagttatgctgcaaaccatggactaaaatgcaaa |
110 |
Q |
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| T |
28600510 |
aagaaaattaaatatgatcgaaattcatgcatttatacatatttacatggctctaaagtatagctgcagttatgctgcaaaccatggactaaaatgcaaa |
28600411 |
T |
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| Q |
111 |
cagactcaaccgatgcaaccgtgattgcagttgattagacttctaaaacagttatattgtggccgcaatcatagatgaacttttatcttacagttaaatg |
210 |
Q |
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| T |
28600410 |
caaactcaaccgatgcaaccgtgattgcagttgcttagacttctaaaacagttatattgtggccgcaatcatagatgaacttttatcttacagttaaatg |
28600311 |
T |
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| Q |
211 |
caggcaaatgcgaacaatgcaaccataattatagttgctgatgcagctaaaagccaaaaactgttatattatggtcgcaatggcgattgaagagtgcaat |
310 |
Q |
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| T |
28600310 |
caggcaaatgcgaacaatgcaaccataattatagttgctgatgcagctaaaagccaaaaactgttatattatgatcgcaatggcgattgaagagtgcaat |
28600211 |
T |
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| Q |
311 |
acttaaaactataccatgtaaatatt |
336 |
Q |
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||||||||||||||||||| |||||| |
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| T |
28600210 |
acttaaaactataccatgtgaatatt |
28600185 |
T |
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