View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18693_low_4 (Length: 566)

Name: NF18693_low_4
Description: NF18693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18693_low_4
NF18693_low_4
[»] chr5 (40 HSPs)
chr5 (1-533)||(930541-931092)
chr5 (53-180)||(15470597-15470724)
chr5 (53-164)||(38503249-38503360)
chr5 (55-169)||(31250141-31250255)
chr5 (55-170)||(43227860-43227975)
chr5 (388-511)||(27498808-27498931)
chr5 (388-495)||(19145505-19145611)
chr5 (60-169)||(17077360-17077469)
chr5 (54-122)||(12375446-12375514)
chr5 (388-535)||(15931056-15931202)
chr5 (386-511)||(8484738-8484863)
chr5 (388-482)||(32059547-32059640)
chr5 (390-459)||(2499307-2499376)
chr5 (388-437)||(12317301-12317350)
chr5 (67-175)||(1572116-1572224)
chr5 (386-437)||(4603772-4603823)
chr5 (388-482)||(11465014-11465107)
chr5 (386-437)||(38631112-38631163)
chr5 (67-169)||(5263175-5263277)
chr5 (388-482)||(25586929-25587022)
chr5 (388-482)||(31288053-31288146)
chr5 (388-482)||(34310139-34310232)
chr5 (388-442)||(40330630-40330684)
chr5 (388-437)||(1827681-1827730)
chr5 (388-437)||(13108600-13108649)
chr5 (388-437)||(22392698-22392747)
chr5 (389-437)||(15971273-15971321)
chr5 (388-435)||(23270675-23270722)
chr5 (386-437)||(25750762-25750813)
chr5 (54-164)||(4395843-4395953)
chr5 (54-180)||(5039674-5039799)
chr5 (388-482)||(11926609-11926702)
chr5 (388-482)||(15641212-15641305)
chr5 (388-442)||(25343236-25343290)
chr5 (389-435)||(42006791-42006837)
chr5 (388-437)||(7085777-7085826)
chr5 (388-437)||(13038605-13038654)
chr5 (389-442)||(21042671-21042724)
chr5 (388-437)||(28614635-28614683)
chr5 (388-437)||(36954815-36954864)
[»] chr7 (54 HSPs)
chr7 (58-180)||(12166079-12166201)
chr7 (53-169)||(23824579-23824694)
chr7 (53-164)||(34322016-34322127)
chr7 (53-164)||(40273813-40273924)
chr7 (54-175)||(26455986-26456107)
chr7 (54-169)||(48433697-48433812)
chr7 (54-164)||(24029978-24030088)
chr7 (388-482)||(2751272-2751365)
chr7 (77-169)||(4956079-4956171)
chr7 (388-535)||(7275278-7275425)
chr7 (54-157)||(33248801-33248904)
chr7 (58-122)||(42554631-42554695)
chr7 (388-482)||(22638293-22638386)
chr7 (386-437)||(28089815-28089866)
chr7 (54-169)||(31793461-31793576)
chr7 (51-133)||(1575684-1575766)
chr7 (388-482)||(7175969-7176062)
chr7 (388-482)||(40543017-40543110)
chr7 (388-437)||(17212054-17212103)
chr7 (389-482)||(22119890-22119982)
chr7 (390-482)||(42814867-42814958)
chr7 (388-495)||(8435789-8435895)
chr7 (388-495)||(12211629-12211735)
chr7 (388-495)||(21574196-21574303)
chr7 (388-495)||(23330833-23330939)
chr7 (53-180)||(38378211-38378338)
chr7 (48-103)||(42338300-42338355)
chr7 (53-180)||(46266660-46266787)
chr7 (388-482)||(2103056-2103149)
chr7 (388-482)||(18044108-18044201)
chr7 (388-482)||(21217940-21218033)
chr7 (388-434)||(25333420-25333466)
chr7 (388-458)||(40332100-40332170)
chr7 (94-180)||(42841757-42841843)
chr7 (389-442)||(577681-577734)
chr7 (389-458)||(1469114-1469183)
chr7 (388-437)||(2344300-2344349)
chr7 (389-501)||(3950876-3950988)
chr7 (388-437)||(19421232-19421281)
chr7 (388-437)||(23854397-23854446)
chr7 (53-169)||(3961395-3961511)
chr7 (388-480)||(11997850-11997941)
chr7 (389-437)||(13332574-13332622)
chr7 (390-482)||(28646972-28647063)
chr7 (392-504)||(47380903-47381014)
chr7 (83-130)||(6384873-6384920)
chr7 (390-437)||(27312155-27312202)
chr7 (388-482)||(7799939-7800032)
chr7 (388-482)||(10091189-10091282)
chr7 (54-100)||(36528275-36528321)
chr7 (77-174)||(43440705-43440802)
chr7 (389-482)||(22696322-22696414)
chr7 (388-437)||(31713046-31713095)
chr7 (386-478)||(9718098-9718189)
[»] chr1 (52 HSPs)
chr1 (54-168)||(50011500-50011614)
chr1 (388-511)||(32729542-32729664)
chr1 (55-169)||(24134611-24134725)
chr1 (54-180)||(34702289-34702415)
chr1 (53-169)||(43109225-43109341)
chr1 (53-180)||(2017661-2017787)
chr1 (57-164)||(47651868-47651974)
chr1 (54-163)||(15417810-15417919)
chr1 (388-482)||(168198-168291)
chr1 (53-175)||(25421846-25421969)
chr1 (54-169)||(27054683-27054804)
chr1 (53-175)||(50065002-50065124)
chr1 (388-536)||(1138576-1138724)
chr1 (67-175)||(50302832-50302940)
chr1 (57-180)||(7438617-7438740)
chr1 (54-169)||(49619965-49620080)
chr1 (388-482)||(4621344-4621437)
chr1 (388-482)||(15059509-15059602)
chr1 (54-132)||(22386260-22386338)
chr1 (388-482)||(24674390-24674483)
chr1 (388-482)||(46607807-46607900)
chr1 (57-170)||(14262707-14262820)
chr1 (389-482)||(24122021-24122113)
chr1 (389-458)||(37349521-37349590)
chr1 (57-170)||(47428881-47428994)
chr1 (388-535)||(8077644-8077791)
chr1 (53-157)||(8893852-8893956)
chr1 (127-175)||(30325024-30325072)
chr1 (388-436)||(47091687-47091735)
chr1 (57-169)||(48497200-48497312)
chr1 (388-495)||(24216975-24217081)
chr1 (54-157)||(25800332-25800435)
chr1 (54-169)||(40061436-40061551)
chr1 (54-180)||(4126892-4127018)
chr1 (388-482)||(7197353-7197446)
chr1 (53-103)||(39304256-39304306)
chr1 (388-437)||(18533875-18533924)
chr1 (388-437)||(34778339-34778388)
chr1 (389-437)||(2272342-2272390)
chr1 (54-101)||(15550879-15550926)
chr1 (388-483)||(20487296-20487390)
chr1 (54-101)||(35527390-35527437)
chr1 (388-435)||(40802220-40802267)
chr1 (53-103)||(12973331-12973381)
chr1 (388-482)||(23734113-23734206)
chr1 (388-482)||(23741305-23741398)
chr1 (388-478)||(29057448-29057537)
chr1 (386-436)||(52592555-52592605)
chr1 (388-437)||(27455017-27455066)
chr1 (396-511)||(1378903-1379018)
chr1 (77-157)||(42937228-42937308)
chr1 (386-458)||(52135125-52135197)
[»] chr8 (47 HSPs)
chr8 (55-164)||(1032564-1032673)
chr8 (50-145)||(44828444-44828539)
chr8 (53-164)||(41454819-41454930)
chr8 (53-145)||(30466671-30466763)
chr8 (53-157)||(41845428-41845532)
chr8 (386-495)||(34694670-34694778)
chr8 (54-122)||(13906660-13906728)
chr8 (57-180)||(38289211-38289334)
chr8 (388-482)||(3734730-3734823)
chr8 (388-482)||(4718646-4718739)
chr8 (52-169)||(4259850-4259967)
chr8 (53-162)||(38063969-38064078)
chr8 (54-122)||(10161957-10162025)
chr8 (386-482)||(27746442-27746537)
chr8 (67-170)||(5904360-5904463)
chr8 (53-119)||(12831562-12831628)
chr8 (388-482)||(34237762-34237855)
chr8 (388-437)||(20305909-20305958)
chr8 (388-437)||(21092542-21092591)
chr8 (67-180)||(39104613-39104725)
chr8 (387-495)||(8387538-8387645)
chr8 (390-482)||(28193477-28193568)
chr8 (59-162)||(1360129-1360231)
chr8 (57-164)||(3311436-3311543)
chr8 (388-495)||(26168942-26169048)
chr8 (78-169)||(43413873-43413964)
chr8 (388-482)||(28964034-28964127)
chr8 (59-145)||(36103933-36104019)
chr8 (388-482)||(39349257-39349350)
chr8 (388-437)||(2618187-2618236)
chr8 (388-437)||(18532108-18532157)
chr8 (388-437)||(19471610-19471659)
chr8 (388-437)||(19542534-19542583)
chr8 (388-437)||(19590113-19590162)
chr8 (393-497)||(41070767-41070870)
chr8 (68-163)||(279990-280084)
chr8 (68-163)||(635768-635862)
chr8 (68-163)||(821571-821665)
chr8 (61-162)||(33820389-33820490)
chr8 (53-142)||(23139066-23139155)
chr8 (390-435)||(28465781-28465826)
chr8 (61-122)||(30623294-30623354)
chr8 (388-437)||(42643269-42643318)
chr8 (52-157)||(43508447-43508552)
chr8 (386-482)||(34639314-34639408)
chr8 (70-106)||(38544974-38545010)
chr8 (83-123)||(38763514-38763554)
[»] chr3 (60 HSPs)
chr3 (53-169)||(33528192-33528308)
chr3 (57-180)||(39739270-39739393)
chr3 (53-162)||(16141347-16141456)
chr3 (56-169)||(47864631-47864744)
chr3 (53-180)||(11483605-11483732)
chr3 (54-131)||(46247253-46247330)
chr3 (54-122)||(30162650-30162718)
chr3 (55-122)||(25165434-25165501)
chr3 (54-164)||(2259150-2259259)
chr3 (54-180)||(32421341-32421467)
chr3 (388-438)||(55287800-55287850)
chr3 (388-484)||(30257621-30257716)
chr3 (54-122)||(55426107-55426175)
chr3 (54-169)||(27817055-27817169)
chr3 (55-162)||(29226320-29226427)
chr3 (54-145)||(46798575-46798666)
chr3 (53-164)||(50381706-50381817)
chr3 (388-482)||(8456257-8456350)
chr3 (388-482)||(30807260-30807353)
chr3 (388-482)||(35492908-35493001)
chr3 (388-482)||(53424283-53424376)
chr3 (388-477)||(4252508-4252596)
chr3 (389-461)||(4462631-4462703)
chr3 (61-157)||(31419583-31419679)
chr3 (68-180)||(31435477-31435589)
chr3 (388-484)||(40940822-40940917)
chr3 (388-482)||(7485632-7485725)
chr3 (70-180)||(27471513-27471623)
chr3 (53-103)||(34225187-34225237)
chr3 (388-482)||(40133556-40133649)
chr3 (388-482)||(46576345-46576438)
chr3 (388-482)||(48977385-48977478)
chr3 (404-486)||(51390942-51391023)
chr3 (388-484)||(18176992-18177087)
chr3 (388-437)||(34492726-34492775)
chr3 (388-437)||(45529905-45529954)
chr3 (54-123)||(53207964-53208032)
chr3 (53-169)||(985906-986022)
chr3 (388-511)||(7470292-7470415)
chr3 (58-162)||(9320953-9321057)
chr3 (54-122)||(36590383-36590451)
chr3 (395-482)||(15566606-15566692)
chr3 (386-437)||(25344208-25344259)
chr3 (390-437)||(25379760-25379807)
chr3 (388-482)||(45272523-45272616)
chr3 (390-493)||(55371381-55371483)
chr3 (388-482)||(25289821-25289914)
chr3 (94-180)||(29645803-29645889)
chr3 (54-120)||(42913431-42913497)
chr3 (50-123)||(1149068-1149140)
chr3 (389-442)||(6041818-6041871)
chr3 (81-122)||(13829077-13829118)
chr3 (388-437)||(21362940-21362989)
chr3 (389-482)||(26158816-26158908)
chr3 (388-437)||(31537989-31538038)
chr3 (388-437)||(50582989-50583038)
chr3 (388-437)||(52455800-52455849)
chr3 (54-122)||(21914071-21914138)
chr3 (54-122)||(25505701-25505768)
chr3 (53-121)||(55494682-55494749)
[»] chr6 (31 HSPs)
chr6 (52-169)||(6228247-6228364)
chr6 (54-169)||(18903354-18903469)
chr6 (54-180)||(29321952-29322078)
chr6 (54-122)||(15717047-15717115)
chr6 (60-180)||(24794871-24794991)
chr6 (388-482)||(15360205-15360298)
chr6 (55-169)||(20415549-20415663)
chr6 (53-169)||(11552863-11552979)
chr6 (388-495)||(9208249-9208355)
chr6 (388-482)||(34147343-34147436)
chr6 (388-482)||(34159959-34160052)
chr6 (388-482)||(9238972-9239065)
chr6 (53-162)||(4854300-4854409)
chr6 (388-482)||(33499471-33499565)
chr6 (57-143)||(1128432-1128518)
chr6 (388-482)||(12591634-12591727)
chr6 (67-121)||(19748105-19748159)
chr6 (56-169)||(17216953-17217066)
chr6 (388-437)||(22576064-22576113)
chr6 (388-437)||(28672064-28672113)
chr6 (388-482)||(3222742-3222834)
chr6 (55-119)||(21874258-21874322)
chr6 (386-437)||(9843933-9843984)
chr6 (390-497)||(10377714-10377820)
chr6 (391-482)||(11448871-11448961)
chr6 (390-460)||(8260486-8260556)
chr6 (68-162)||(9357163-9357257)
chr6 (58-116)||(25045737-25045795)
chr6 (388-437)||(13753237-13753286)
chr6 (388-437)||(21982471-21982520)
chr6 (53-145)||(18618550-18618642)
[»] scaffold0001 (1 HSPs)
scaffold0001 (54-169)||(419705-419820)
[»] chr2 (30 HSPs)
chr2 (53-171)||(11069334-11069448)
chr2 (55-162)||(31149096-31149202)
chr2 (55-180)||(43027149-43027274)
chr2 (388-482)||(8192458-8192551)
chr2 (386-482)||(4567544-4567639)
chr2 (393-501)||(4618773-4618880)
chr2 (388-535)||(15037956-15038103)
chr2 (53-169)||(19843350-19843466)
chr2 (388-511)||(44946130-44946253)
chr2 (56-169)||(18424139-18424249)
chr2 (55-162)||(33482636-33482743)
chr2 (54-169)||(34107488-34107602)
chr2 (54-180)||(25553122-25553247)
chr2 (388-482)||(32845088-32845181)
chr2 (58-103)||(16403522-16403567)
chr2 (389-482)||(17324764-17324856)
chr2 (388-437)||(18976576-18976625)
chr2 (388-437)||(27269501-27269550)
chr2 (52-162)||(3330195-3330305)
chr2 (54-101)||(40203334-40203381)
chr2 (388-478)||(33827684-33827773)
chr2 (388-437)||(6714432-6714481)
chr2 (388-437)||(11941361-11941410)
chr2 (57-122)||(32084841-32084906)
chr2 (388-461)||(32526212-32526285)
chr2 (60-169)||(33065244-33065353)
chr2 (389-482)||(44976261-44976353)
chr2 (389-437)||(4852556-4852604)
chr2 (388-424)||(8379433-8379469)
chr2 (53-169)||(41749939-41750054)
[»] chr4 (43 HSPs)
chr4 (55-169)||(40406947-40407062)
chr4 (53-147)||(27862840-27862934)
chr4 (54-180)||(46283115-46283241)
chr4 (57-169)||(16556447-16556559)
chr4 (57-180)||(36993037-36993160)
chr4 (54-169)||(50815700-50815815)
chr4 (388-482)||(25852211-25852304)
chr4 (388-480)||(13873404-13873495)
chr4 (388-495)||(41621690-41621796)
chr4 (388-482)||(27528902-27528995)
chr4 (388-482)||(40058959-40059052)
chr4 (388-482)||(46714389-46714483)
chr4 (53-103)||(51974739-51974789)
chr4 (388-482)||(52983616-52983709)
chr4 (388-482)||(54127449-54127542)
chr4 (386-535)||(20566344-20566494)
chr4 (389-482)||(34835527-34835619)
chr4 (53-169)||(2832058-2832174)
chr4 (54-122)||(13210198-13210266)
chr4 (54-122)||(23448966-23449034)
chr4 (389-461)||(42245744-42245816)
chr4 (390-437)||(34722169-34722216)
chr4 (388-482)||(32986194-32986287)
chr4 (388-482)||(34844865-34844958)
chr4 (59-175)||(29430495-29430611)
chr4 (53-169)||(8716375-8716493)
chr4 (57-157)||(43362167-43362267)
chr4 (388-435)||(5609355-5609402)
chr4 (68-175)||(25234839-25234946)
chr4 (58-160)||(35909024-35909127)
chr4 (52-103)||(49635423-49635474)
chr4 (53-103)||(25104319-25104369)
chr4 (388-482)||(33696386-33696479)
chr4 (48-118)||(46676502-46676571)
chr4 (53-119)||(56497611-56497676)
chr4 (388-437)||(1985833-1985882)
chr4 (389-446)||(3089454-3089511)
chr4 (388-437)||(19660683-19660732)
chr4 (54-103)||(41971352-41971401)
chr4 (386-478)||(13584365-13584456)
chr4 (83-123)||(14542759-14542799)
chr4 (389-437)||(43719216-43719264)
chr4 (389-437)||(45787855-45787902)
[»] scaffold0576 (1 HSPs)
scaffold0576 (388-482)||(5189-5282)
[»] scaffold0018 (1 HSPs)
scaffold0018 (54-122)||(121833-121901)
[»] scaffold0070 (1 HSPs)
scaffold0070 (388-482)||(40322-40415)
[»] scaffold0026 (1 HSPs)
scaffold0026 (388-482)||(97473-97566)
[»] scaffold0623 (1 HSPs)
scaffold0623 (389-482)||(1163-1255)
[»] scaffold0366 (2 HSPs)
scaffold0366 (389-482)||(9406-9498)
scaffold0366 (389-437)||(12151-12199)
[»] scaffold0199 (1 HSPs)
scaffold0199 (388-437)||(8558-8607)
[»] scaffold0459 (1 HSPs)
scaffold0459 (389-437)||(10844-10892)
[»] scaffold0460 (1 HSPs)
scaffold0460 (388-483)||(8285-8379)
[»] scaffold0007 (1 HSPs)
scaffold0007 (81-164)||(146793-146875)
[»] scaffold0328 (1 HSPs)
scaffold0328 (388-437)||(14988-15037)
[»] scaffold0068 (1 HSPs)
scaffold0068 (388-437)||(41795-41844)
[»] scaffold0051 (1 HSPs)
scaffold0051 (388-437)||(53022-53071)
[»] scaffold0028 (1 HSPs)
scaffold0028 (388-461)||(27773-27846)


Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 533
Target Start/End: Complemental strand, 931092 - 930541
Alignment:
Q  1 gatgaatgtctttgaatctaatacttcgttacacctnnnnnnnggtgacatctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgt 100  Q
    ||||||||||||||||||||||||||||||||||||       || |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  931092 gatgaatgtctttgaatctaatacttcgttacacctaaaaaaagg-gacacctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgt 930994  T
Q  101 gcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagctactaaactacctgacnnnnnnnnng-tgacaccnn 199  Q
    ||| ||  |||||||||||||  || || || | ||||||||||||||| ||||||| |||||  |||||||||| ||||           |||||||      
T  930993 gcaggggttggggttcgaacctcagacatcccacttattcatcttaaaggtgaatttctctagtcactaaactacttgaccaaaaaaaaaatgacacctt 930894  T
Q  200 nnnnnatttgccttgatgatcttatggtcaccacc----------agtacatatgttagagtaaaagtttcagggtcagaaacc----------gtatca 279  Q
         |||| |||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||          ||||||    
T  930893 tttttatttaccttgatgatcttatggtcaccaccccctccagagagtacatatgttagagtaaaagtttcagggtcagaaaccttaattcttcgtatca 930794  T
Q  280 aaacttatttgttcagcagttacccaatccttaatcttgtcgtacctgaaattgagaatttgtttgcattaagcatcatccaacaccattttaatatcaa 379  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  930793 aaacttatttgttcagcaattacccaattcttaatcttgtcgtacatgaaattgagaatttgtttgcattaagcatcatccaacaccattttaatatcaa 930694  T
Q  380 tacgagatccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcgg 479  Q
    |||||||||||||||||||||||  |||||||||||||| || ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||    
T  930693 tacgagatccatttggggttggcccagtggttggcttgagattttagagtttgctcctctcaaagtctcaggttcgattcccacttggtgccaatttcgg 930594  T
Q  480 tggacaaattcatacataacttgctatggcttagaacagagccctcgtaagtgg 533  Q
    |||||||||||||||||| ||||||  ||||||||||| |||||||| ||||||    
T  930593 tggacaaattcatacatagcttgctccggcttagaaca-agccctcgcaagtgg 930541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 15470724 - 15470597
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    |||||| |||||| ||  ||||| ||||||||| ||||||||||||||||| || ||| | ||||||||| || ||||| ||||||||||||| ||| ||    
T  15470724 tgtccctatgagcttaattcatttggtaagggataatgcacaatatgtgcaagggctgagattcgaaccccagacaccccatttattcatctttaaggtg 15470625  T
Q  153 aatttttctagctactaaactacctgac 180  Q
    ||||| |||||| |||||||||| ||||    
T  15470624 aatttctctagccactaaactacttgac 15470597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 38503360 - 38503249
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||  | ||||| | ||||||||||| ||| ||    
T  38503360 tgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtg 38503261  T
Q  153 aatttttctagc 164  Q
    ||||| ||||||    
T  38503260 aatttctctagc 38503249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 31250141 - 31250255
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaa 154  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||  | ||||| | ||||||||||| ||| ||||    
T  31250141 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 31250240  T
Q  155 tttttctagctacta 169  Q
    ||| |||||| ||||    
T  31250241 tttctctagccacta 31250255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 43227860 - 43227975
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaa 154  Q
    |||| |||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||  | ||||| | ||||||||||| ||| ||||    
T  43227860 tccctatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 43227959  T
Q  155 tttttctagctactaa 170  Q
    ||| |||||| |||||    
T  43227960 tttctctagccactaa 43227975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 511
Target Start/End: Complemental strand, 27498931 - 27498808
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 486  Q
    ||||||||||||| | |||||||||||||| |||||| |||||||||||| |  |  |||| |||||||||||| | |||||||||||||||||| | ||    
T  27498931 ccatttggggttgacctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctc-tggtgccaatttcggtgggctaa 27498833  T
Q  487 attcatacataacttgctatggctt 511  Q
     | |||||||| |||||| ||||||    
T  27498832 gtccatacatagcttgctctggctt 27498808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 19145611 - 19145505
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    ||||||||||||||| ||||||||| ||||  ||||| |||| ||||||| ||||  |||| |||||||||||| | |||||||||||||||||| |||     
T  19145611 ccatttggggttggcctagtggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccctc-tggtgccaatttcggtgggcaag 19145513  T
Q  488 ttcataca 495  Q
    | ||||||    
T  19145512 tccataca 19145505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 169
Target Start/End: Original strand, 17077360 - 17077469
Alignment:
Q  60 atgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaattttt 159  Q
    |||||| ||||||||| ||||||||| |||||||||| |||||| ||   ||| |||||||||  | ||||| | ||||||||||||||| ||||||| |    
T  17077360 atgagcttagctcatttggtaagggataatgcacaatttgtgcaggggtcgggattcgaaccccggacaccccacttattcatcttaaaggtgaatttat 17077459  T
Q  160 ctagctacta 169  Q
    ||||| ||||    
T  17077460 ctagccacta 17077469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 12375514 - 12375446
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||||| ||||||||| ||||| ||| ||||||||||||||||| || | |||||||||||||    
T  12375514 gtccccatgagcttagctcatttggtaatggataatgcacaatatgtgcaggggccggggttcgaaccc 12375446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 535
Target Start/End: Original strand, 15931056 - 15931202
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    ||||||||||||||| |||||||| |||||  ||||| ||||||||| |||   || |||| |||||||||||| | ||||||||||||||||||  ||     
T  15931056 ccatttggggttggcctagtggttagcttgggatcttggagtttgcttcttcacaagtctcaggttcgattccctc-tggtgccaatttcggtggctaag 15931154  T
Q  488 ttcatacataacttgctatggcttagaacagagccctcgtaagtgggc 535  Q
    | |||||| | | |||| ||||||  ||||| || |||| ||||||||    
T  15931155 tccatacagagcctgctctggctttaaacagggctctcgcaagtgggc 15931202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 386 - 511
Target Start/End: Complemental strand, 8484863 - 8484738
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac- 484  Q
    ||||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||| ||||||| | |||||||||||||||||| |     
T  8484863 atccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctc-tggtgccaatttcggtgggct 8484765  T
Q  485 aaattcatacataacttgctatggctt 511  Q
    || |||||||| | |||||| ||||||    
T  8484764 aagttcatacagagcttgctctggctt 8484738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 32059640 - 32059547
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||  | ||||||||||||||||||    
T  32059640 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttc-tggtgccaatttcggtgg 32059547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 459
Target Start/End: Complemental strand, 2499376 - 2499307
Alignment:
Q  390 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattc 459  Q
    |||||||||||||||||||| || ||||  ||||| || ||||||||||||||| |||| ||||||||||    
T  2499376 atttggggttggcttagtggctgacttgggatcttggaatttgctcctttcaaagtctcaggttcgattc 2499307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 12317350 - 12317301
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  12317350 ccatttggggttggcctagtggttggcttggaatcttggagtttgctcct 12317301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 1572116 - 1572224
Alignment:
Q  67 tagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagcta 166  Q
    ||||||||| | |||||||  ||||||| | |||||| || |||||||||||||||  | | ||| | ||||||||||||||| ||||||| |||||| |    
T  1572116 tagctcatttgttaagggattatgcacattttgtgcaggggctggggttcgaaccccggactccccacttattcatcttaaaggtgaatttctctagcca 1572215  T
Q  167 ctaaactac 175  Q
    ||| |||||    
T  1572216 ctagactac 1572224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 4603772 - 4603823
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  4603772 atccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 4603823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 11465107 - 11465014
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaat-tctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||| |||||||| ||||| ||||||||||||||| ||||||||||| | ||||| |||| ||||||||| || | |||||||||||| |||||    
T  11465107 ccatttcgggttggcctagtgattggcttgaaatcttggagtttgctcc-tccaaatgtctcaggttcgatttcctc-tggtgccaattttggtgg 11465014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 38631163 - 38631112
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  38631163 atccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 38631112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 5263175 - 5263277
Alignment:
Q  67 tagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagcta 166  Q
    ||||||||| ||||| ||| ||||||||||||||| | ||  ||  |||||||||| || ||||  ||||||||||||| ||| ||||||| |||||| |    
T  5263175 tagctcatttggtaatggataatgcacaatatgtgtagggggtgatgttcgaacccgagacaccacatttattcatctttaagctgaatttctctagcca 5263274  T
Q  167 cta 169  Q
    |||    
T  5263275 cta 5263277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 25586929 - 25587022
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| ||||||||| || | ||||||||||||||||||    
T  25586929 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctc-tggtgccaatttcggtgg 25587022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 31288146 - 31288053
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||| |||||||| ||||||||||||||  ||||| ||||||||||||   ||  ||||  |||||||||||  |||||||||||||||||||    
T  31288146 ccattttgggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccc-tttggtgccaatttcggtgg 31288053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 34310139 - 34310232
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||| |||||| |||||| ||||||||||||    |  |||| |||||||||||| | |||||||||||| |||||    
T  34310139 ccatttggggttggcctagtggtcggcttggaatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaattttggtgg 34310232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 40330630 - 40330684
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaa 442  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||||||| ||||    
T  40330630 ccatttgaggttggcttagtggttagcttgagatcttggagtttgctcctctcaa 40330684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 1827730 - 1827681
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||    
T  1827730 ccatttggggttgacctagtggttggcttgagatcttggagtttgctcct 1827681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 13108649 - 13108600
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  13108649 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 13108600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 22392698 - 22392747
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  22392698 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 22392747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 15971321 - 15971273
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||| |||||||||||||||||||||||  ||||| ||||||||||||    
T  15971321 catttagggttggcttagtggttggcttgggatcttggagtttgctcct 15971273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 435
Target Start/End: Complemental strand, 23270722 - 23270675
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctc 435  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  23270722 ccatttggggttggcctagtggttggcttgggatcttggagtttgctc 23270675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 25750813 - 25750762
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  25750813 atccatttggggttggcctagtggttgacttgggatcttggagtttgctcct 25750762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 164
Target Start/End: Complemental strand, 4395953 - 4395843
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| || |||||| || ||  || |||||| ||| |||||| || | || ||||||||||  | ||||| ||||||||||||| ||| |||    
T  4395953 gtccccatgagcttaactcatttggcaaatgataatgcataatgtgtgcaggggccggagttcgaacccctgacaccccatttattcatctttaaggtga 4395854  T
Q  154 atttttctagc 164  Q
    |||| ||||||    
T  4395853 atttctctagc 4395843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 5039674 - 5039799
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| || |||||| ||||| ||| |||| |||||||||||| || | |||||||||||    | ||||| | ||||||||||| ||| | |    
T  5039674 gtccccatgagcttaactcatttggtaa-ggataatgtacaatatgtgcaagggccggggttcgaacttcggacaccccacttattcatctttaaggtaa 5039772  T
Q  154 atttttctagctactaaactacctgac 180  Q
    |||| |||||| |||| ||||| ||||    
T  5039773 atttctctagccactagactacttgac 5039799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 11926702 - 11926609
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| |||||||||| |||  ||||| ||||||||||||    |  |||| |||| ||||||| | ||||||||||||||||||    
T  11926702 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccctc-tggtgccaatttcggtgg 11926609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 15641305 - 15641212
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||| || ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||| ||||||||||||||    
T  15641305 ccatttggggttagcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggagccaatttcggtgg 15641212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 25343236 - 25343290
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaa 442  Q
    ||||||||||||||| ||||||||| ||||||||||| || | ||||| ||||||    
T  25343236 ccatttggggttggcctagtggttgacttgaaatcttggattgtgctcttttcaa 25343290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 42006791 - 42006837
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctc 435  Q
    |||||||||||||  ||||||||||||||| ||||| ||||||||||    
T  42006791 catttggggttgggctagtggttggcttgagatcttggagtttgctc 42006837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 7085826 - 7085777
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    |||||||||| |||||||||||||||||||  ||||| |||||| |||||    
T  7085826 ccatttggggctggcttagtggttggcttgggatcttggagttttctcct 7085777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 13038654 - 13038605
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| |||||||||| |||  ||||| ||||||||||||    
T  13038654 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcct 13038605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 21042724 - 21042671
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaa 442  Q
    ||||||||||||| |||||| |||| |||  ||||| |||||||||||||||||    
T  21042724 catttggggttggtttagtgattggtttgggatcttggagtttgctcctttcaa 21042671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 28614683 - 28614635
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    |||||||||||||| | |||||||||||||| ||||||||||||| ||||    
T  28614683 ccatttggggttgg-tgagtggttggcttgagatcttagagtttgttcct 28614635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 36954815 - 36954864
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  36954815 ccatttggggttggcctagtggttgccttgggatcttggagtttgctcct 36954864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 4e-27; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 58 - 180
Target Start/End: Original strand, 12166079 - 12166201
Alignment:
Q  58 ccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaattt 157  Q
    |||||| | ||||||||| ||||||||| |||||||||| |||||| || ||||||||||||||| || ||||| | ||||||||||| ||| |||||||    
T  12166079 ccatgaacttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaattt 12166178  T
Q  158 ttctagctactaaactacctgac 180  Q
     ||||||||||||||||| ||||    
T  12166179 ctctagctactaaactacttgac 12166201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 23824694 - 23824579
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| | | |||||||||||  | ||||||| ||||||||||| ||| ||    
T  23824694 tgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcatgggccgaggttcgaaccc-ggacaccctacttattcatctttaaggtg 23824596  T
Q  153 aatttttctagctacta 169  Q
    ||||| |||||| ||||    
T  23824595 aatttctctagccacta 23824579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 34322127 - 34322016
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||| ||||||||||||| | ||||||| ||||||||||||||||| || |||||||| ||| || || ||||| ||||||||||||||||  ||    
T  34322127 tgtccccataagcatagctcatttgataagggataatgcacaatatgtgcagggactggggtttgaatcccagacaccccatttattcatcttaaacgtg 34322028  T
Q  153 aatttttctagc 164  Q
    ||||| ||||||    
T  34322027 aatttctctagc 34322016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 40273813 - 40273924
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||  | ||||| | ||||||||||| ||| ||    
T  40273813 tgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtg 40273912  T
Q  153 aatttttctagc 164  Q
    ||||| ||||||    
T  40273913 aatttctctagc 40273924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 26456107 - 26455986
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||| || |||  ||| |||||| || ||| | | ||||||| ||||||| |||    
T  26456107 gtccccatgagcttagctcatttggtaagggacaatgcacaatatgtgcagggactgacgtttgaaccccagacactccagttattcaccttaaaggtga 26456008  T
Q  154 atttttctagctactaaactac 175  Q
    |||| |||||| |||| |||||    
T  26456007 atttctctagccactagactac 26455986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 48433812 - 48433697
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | ||||||| |||||  | ||||| | ||||||||||| ||| |||    
T  48433812 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcaaaccccggacaccccacttattcatctttaaggtga 48433713  T
Q  154 atttttctagctacta 169  Q
    |||| |||||| ||||    
T  48433712 atttctctagccacta 48433697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 24029978 - 24030088
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||  ||||||||| | ||||||| ||||||||||||||| | || | ||||||||||||| || ||||| ||||||||||||| ||| |||    
T  24029978 gtccccatgagtttagctcatttgataagggataatgcacaatatgtgtaggggccggggttcgaaccccagacaccccatttattcatctttaaggtga 24030077  T
Q  154 atttttctagc 164  Q
    |||| ||||||    
T  24030078 atttctctagc 24030088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 2751272 - 2751365
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  2751272 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 2751365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 4956171 - 4956079
Alignment:
Q  77 ggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagctacta 169  Q
    ||||||||| ||||||||||||||||| ||   |||||||||||||| | ||||| | ||||||||||| ||| ||||||| |||||| ||||    
T  4956171 ggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccctggacaccccacttattcatctttaaggtgaatttctctagccacta 4956079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 535
Target Start/End: Original strand, 7275278 - 7275425
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 486  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | |||||||||||||||||| | ||    
T  7275278 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgggctaa 7275376  T
Q  487 attcatacataacttgctatggcttagaacagagccctcgtaagtgggc 535  Q
     | |||||| | |||||| ||||||  ||||| |||| || ||||||||    
T  7275377 gtccatacagagcttgctctggctttaaacagggcccccgcaagtgggc 7275425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 33248904 - 33248801
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca-tggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    |||||||||||| ||||||||| |||||||||  ||||||||||| ||||  |||| |||||||||||||  | ||||||| ||||||||||| ||| ||    
T  33248904 gtccccatgagcttagctcatttggtaagggatgatgcacaatatatgcagaggtc-ggggttcgaaccccggacaccctacttattcatctttaaggtg 33248806  T
Q  153 aattt 157  Q
    |||||    
T  33248805 aattt 33248801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 122
Target Start/End: Original strand, 42554631 - 42554695
Alignment:
Q  58 ccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||||||    
T  42554631 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccc 42554695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 22638293 - 22638386
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaa-ttctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||  ||||||||| ||||| ||||||||||||||| ||||||||  |||| |||||||||||| | |||||| |||||||||||    
T  22638293 ccatttggggttggtctagtggttgacttgagatcttagagtttgct-ctttcaaaggtctcaggttcgattccctc-tggtgctaatttcggtgg 22638386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 28089815 - 28089866
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  28089815 atccatttggggttggcctagtggttggcttgagatcttggagtttgctcct 28089866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 31793461 - 31793576
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||| ||||||| ||||||||| | ||||||| ||||||||||||||||| ||   |||||||||||||  | ||||| | ||||||||||| ||| ||     
T  31793461 gtccacatgagcttagctcatttgttaagggataatgcacaatatgtgcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggtgg 31793560  T
Q  154 atttttctagctacta 169  Q
    |||| |||||| ||||    
T  31793561 atttctctagccacta 31793576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 1575684 - 1575766
Alignment:
Q  51 tctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcacccta 133  Q
    ||||||||||||||| || |||||| ||||||||| ||| |||||||||| || ||  |||||||||||||| || |||||||    
T  1575684 tctgtccccatgagcttaactcatttggtaagggataatacacaatatgtacaggggttggggttcgaaccccagacacccta 1575766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 7176062 - 7175969
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  7176062 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 7175969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 40543110 - 40543017
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  40543110 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 40543017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 17212054 - 17212103
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  17212054 ccatttggggttggcttagtggttggcttgggatcttggagtttgctcct 17212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 482
Target Start/End: Original strand, 22119890 - 22119982
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  22119890 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 22119982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 42814867 - 42814958
Alignment:
Q  390 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||| |||||||||||||||| ||||  ||||| |||||||||||| |  || |||| |||||||||||| | ||||| ||||||||||||    
T  42814867 atttggagttggcttagtggttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgattccctc-tggtgtcaatttcggtgg 42814958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 8435895 - 8435789
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    ||||||||||||||  ||||||||| ||||  ||||| |||||||||||||| ||  |||  ||||||||| || | |||||||||||||||||| |||     
T  8435895 ccatttggggttggtctagtggttgacttgggatcttggagtttgctcctttgaagatcttaggttcgatttcctc-tggtgccaatttcggtgggcaag 8435797  T
Q  488 ttcataca 495  Q
    | ||||||    
T  8435796 tccataca 8435789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 12211735 - 12211629
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    ||||||||||||||| |||||||||||||   ||||| |||| ||||||| ||||  |||| |||| |||| || | |||||||||||||| |||||||     
T  12211735 ccatttggggttggcctagtggttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatttcctc-tggtgccaatttcgatggacaag 12211637  T
Q  488 ttcataca 495  Q
    | ||||||    
T  12211636 tccataca 12211629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 21574303 - 21574196
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    ||||||||||||||| |||||||||| |||  || || |||| ||||||| ||||  || | ||||||||||||  |||||||||| |||||||| |||     
T  21574303 ccatttggggttggcctagtggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattcccctttggtgccaacttcggtgggcaag 21574204  T
Q  488 ttcataca 495  Q
    | ||||||    
T  21574203 tccataca 21574196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 23330939 - 23330833
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    |||||||||||| || ||||||||||||||  || ||||||| ||||||| ||||  |||| ||||||| |||| |  ||||||||||||||||| |||     
T  23330939 ccatttggggttagcctagtggttggcttgggattttagagtgtgctcctctcaaggtctcaggttcgactccctc-cggtgccaatttcggtgggcaag 23330841  T
Q  488 ttcataca 495  Q
    | ||||||    
T  23330840 tccataca 23330833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 38378211 - 38378338
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||  ||| | ||| ||||||||| ||||||||||||||||| || | |||||| ||||||  | ||||| | |||||||| || ||| ||    
T  38378211 tgtccccatgagtttagtttatttggtaagggataatgcacaatatgtgcaggggccggggtttgaaccccggacaccccacttattcatttttaaggtg 38378310  T
Q  153 aatttttctagctactaaactacctgac 180  Q
    ||||| |||| | ||||| |||| ||||    
T  38378311 aatttctctacccactaagctacttgac 38378338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 42338355 - 42338300
Alignment:
Q  48 acatctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca 103  Q
    |||||| ||||||||||| ||||||||| ||||||| | |||||||||||||||||    
T  42338355 acatctatccccatgagcttagctcatttggtaaggaataatgcacaatatgtgca 42338300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 46266660 - 46266787
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||| || |||||| ||||||||| |||||||||| |||||  ||   |||||||||||| |   || || | ||||||||||||||| ||    
T  46266660 tgtccccatgagcttaactcatttggtaagggataatgcacaatttgtgcgggggacggggttcgaaccttgaacatcccacttattcatcttaaaggtg 46266759  T
Q  153 aatttttctagctactaaactacctgac 180  Q
    ||||| |||| | |||| ||||| ||||    
T  46266760 aatttatctaaccactagactacttgac 46266787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 2103056 - 2103149
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||| ||||||||||||||    
T  2103056 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggagccaatttcggtgg 2103149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 18044108 - 18044201
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  || | |||||||||||| ||| ||||||||||||||||    
T  18044108 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccctctt-gtgccaatttcggtgg 18044201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 21218033 - 21217940
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | || |||||||||||||||    
T  21218033 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tgatgccaatttcggtgg 21217940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 25333420 - 25333466
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgct 434  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||    
T  25333420 ccatttggggttggcttagtggttggcttgggatcttggagtttgct 25333466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 458
Target Start/End: Original strand, 40332100 - 40332170
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgatt 458  Q
    |||||||| |||||  ||||||||||||||||||||| |||||||||||| | ||  |||| |||||||||    
T  40332100 ccatttggagttggtctagtggttggcttgaaatcttggagtttgctcctctaaaggtctcaggttcgatt 40332170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 42841843 - 42841757
Alignment:
Q  94 aatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagctactaaactacctgac 180  Q
    |||||||||| || | ||||||||||||| || ||||| | ||||||||||||||| ||||||| |||||  ||| |||||| ||||    
T  42841843 aatatgtgcaaggaccggggttcgaaccccagacaccccacttattcatcttaaaggtgaatttctctagacactgaactacttgac 42841757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 577681 - 577734
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaa 442  Q
    |||||||||||||| |||||||| |||||  |||||||||||||||| ||||||    
T  577681 catttggggttggcctagtggtttgcttgggatcttagagtttgctcatttcaa 577734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 458
Target Start/End: Original strand, 1469114 - 1469183
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgatt 458  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||| || | ||||  |||| |||||||||    
T  1469114 catttggggttggcctagtggttgacttgaaatcttggagtttgttcatctcaaggtctcaggttcgatt 1469183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 2344300 - 2344349
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  2344300 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 2344349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 501
Target Start/End: Complemental strand, 3950988 - 3950876
Alignment:
Q  389 catttggggttggcttagtggttggcttga-aatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    |||||||||||||  ||||||||||||||| |||||| |||  ||||||| ||||  ||||  |||||||||||  ||||||| ||||| |||||||||     
T  3950988 catttggggttggtctagtggttggcttgagaatcttggagcgtgctcctctcaatgtctcatgttcgattccc-tttggtgctaattttggtggacaag 3950890  T
Q  488 ttcatacataactt 501  Q
    | ||| ||||||||    
T  3950889 tccatgcataactt 3950876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 19421232 - 19421281
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||| ||||||||||||||||  ||||| ||||||||||||    
T  19421232 ccatttggggttgacttagtggttggcttgggatcttggagtttgctcct 19421281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 23854397 - 23854446
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  23854397 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 23854446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 3961511 - 3961395
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    |||||||| |||  || |||||| ||||| ||| |||||||||| ||||||  | | |||||||||||||  | || || | |||||||| |||||| ||    
T  3961511 tgtccccacgagtttaactcatttggtaaaggataatgcacaatttgtgcagaggccggggttcgaaccccggacatcccacttattcattttaaaggtg 3961412  T
Q  153 aatttttctagctacta 169  Q
    ||||| |||||||||||    
T  3961411 aatttctctagctacta 3961395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 480
Target Start/End: Original strand, 11997850 - 11997941
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggt 480  Q
    ||||||| ||||||  ||||||||||||||  ||||| |||||||||||| |  |  |||| |||||||||||| | ||||||||||||||||    
T  11997850 ccatttgtggttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctc-tggtgccaatttcggt 11997941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 13332622 - 13332574
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  13332622 catttggggttggcctagtggttggcttgggatcttggagtttgctcct 13332574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 28646972 - 28647063
Alignment:
Q  390 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||| ||||| ||| ||||  ||||| |||| |||| || ||||  |||| |||||||||||| | ||||||||||||||||||    
T  28646972 atttggggttggcctagtgattgacttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 28647063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 504
Target Start/End: Original strand, 47380903 - 47381014
Alignment:
Q  392 ttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaattca 491  Q
    ||||||||||| ||||||||||||||| || ||  ||||||||| | ||||  | |  |||||||||| ||||| |||||||||||||||  ||| | ||    
T  47380903 ttggggttggcctagtggttggcttgagattttgtagtttgctcttctcaagattttaggttcgattctcactt-gtgccaatttcggtgtgcaagtcca 47381001  T
Q  492 tacataacttgct 504  Q
    |||||| ||||||    
T  47381002 tacatagcttgct 47381014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 6384873 - 6384920
Alignment:
Q  83 ggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcacc 130  Q
    |||||||||| ||||| |||| ||||||||||||||||||||| ||||    
T  6384873 ggacaatgcataatatatgcaaggtctggggttcgaaccctagacacc 6384920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 27312155 - 27312202
Alignment:
Q  390 atttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  27312155 atttggggttggcctagtggttggcttgggatcttggagtttgctcct 27312202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 7800032 - 7799939
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||| | ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||| ||||    
T  7800032 ccatttggggttgacctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcagtgg 7799939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 10091189 - 10091282
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||| ||||||||||||||    
T  10091189 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggagccaatttcggtgg 10091282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 36528321 - 36528275
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgt 100  Q
    |||||||||||| || |||||| ||||||||| ||||||||||||||    
T  36528321 gtccccatgagcttaactcatttggtaagggataatgcacaatatgt 36528275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 43440705 - 43440802
Alignment:
Q  77 ggtaagggacaatgcacaatatgtgca-tggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagctactaaacta 174  Q
    ||||||||| |||||||||||||||||  |||| ||||||||||  | || ||||| | ||||||||||| ||| ||||||| |||||| |||| ||||    
T  43440705 ggtaagggataatgcacaatatgtgcagaggtc-ggggttcgaattccagacaccccacttattcatctttaaggtgaatttctctagccactagacta 43440802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 482
Target Start/End: Original strand, 22696322 - 22696414
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||| ||||||||| |||||||||  |||  ||||| |||| ||||||| ||||  |||| |||| ||||||| || |||||||||||||||||    
T  22696322 cattaggggttggcctagtggttgatttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccctct-ggtgccaatttcggtgg 22696414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 31713095 - 31713046
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| |||||||||| |||  ||||| ||||||||||||    
T  31713095 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcct 31713046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 478
Target Start/End: Complemental strand, 9718189 - 9718098
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcg 478  Q
    ||||||||| ||||||| ||||||||||| ||| || || ||||||||||||   ||| ||||  ||||||||||| | ||||| ||||||||    
T  9718189 atccatttgaggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccctc-tggtgtcaatttcg 9718098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 50011500 - 50011614
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||| || || || | ||||||||||| ||| |||    
T  50011500 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttattcatctttaaggtga 50011599  T
Q  154 atttttctagctact 168  Q
    |||| ||||||||||    
T  50011600 atttctctagctact 50011614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 388 - 511
Target Start/End: Original strand, 32729542 - 32729664
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    ||||||||||||||| ||||||||||||||  ||||| |||||||||||| ||||| |||| ||||||||||||   |||||||||||||||||| |||     
T  32729542 ccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccc-tatggtgccaatttcggtgggcaag 32729640  T
Q  488 ttcatacataacttgctatggctt 511  Q
    | |||||| | |||||| ||||||    
T  32729641 tccatacagagcttgctctggctt 32729664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 24134725 - 24134611
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaa 154  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||  | ||||| | ||||||||||| ||| ||||    
T  24134725 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 24134626  T
Q  155 tttttctagctacta 169  Q
    ||| |||||| ||||    
T  24134625 tttctctagccacta 24134611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 34702415 - 34702289
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||  | ||||  | ||||||||||| |||||||    
T  34702415 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacacctcacttattcatctttaagatga 34702316  T
Q  154 atttttctagctactaaactacctgac 180  Q
    |||| | |||| |||| ||||| ||||    
T  34702315 atttctttagccactagactacttgac 34702289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 43109341 - 43109225
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    |||| |||||||| ||||||||| ||||||||| |||||| |||||||||| || | |||||||||||||  | ||||  ||||||||||||| ||| ||    
T  43109341 tgtctccatgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccggggttcgaaccccggacacctcatttattcatctttaaggtg 43109242  T
Q  153 aatttttctagctacta 169  Q
    ||||| |||||| ||||    
T  43109241 aatttctctagccacta 43109225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 2017787 - 2017661
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||| ||||||| ||||||||| ||||||||| |||||||||||||||||| | |||||||||||| ||  | ||||| | || ||||| || ||| ||    
T  2017787 tgtcctcatgagcttagctcatttggtaagggataatgcacaatatgtgcataggctggggttcgaatcccggacaccccacttgttcat-tttaaggtg 2017689  T
Q  153 aatttttctagctactaaactacctgac 180  Q
    ||||| |||||| |||||||||| ||||    
T  2017688 aatttctctagccactaaactacttgac 2017661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 47651868 - 47651974
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||||| || |||||||||||| ||||| || || | |||||||| || ||| ||||||    
T  47651868 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaatcctagacatcccacttattcat-tttaaggtgaatt 47651966  T
Q  157 tttctagc 164  Q
    | ||||||    
T  47651967 tctctagc 47651974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 15417919 - 15417810
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||||||||| ||||| ||| ||||||||||||||| | || |||||||||||| |   | ||||| | ||||||||||| |||||||    
T  15417919 gtccccatgagcttagctcatttggtaaaggataatgcacaatatgtgtaggggctggggttcgaagctcggacaccccacttattcatctttaagatga 15417820  T
Q  154 atttttctag 163  Q
    |||| |||||    
T  15417819 atttctctag 15417810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 168198 - 168291
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaa-ttctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||| |||||| ||||||||||||||  ||||||||||||||| ||||||||  |||| |||||||||||| | ||||||||||||||||||    
T  168198 ccatttggagttggcctagtggttggcttgggatcttagagtttgct-ctttcaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 168291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 25421846 - 25421969
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatctt-aaagat 151  Q
    ||||||||||||| || |||||| |||||||||||||||||||| |||| | || ||||||||| ||||| || ||| | | ||||||| ||| |||| |    
T  25421846 tgtccccatgagcttaactcatttggtaagggacaatgcacaatttgtgtaggggctggggttcaaaccccagacactccacttattcaccttaaaaggt 25421945  T
Q  152 gaatttttctagctactaaactac 175  Q
    |||||| |||| | ||||||||||    
T  25421946 gaatttctctaaccactaaactac 25421969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 27054683 - 27054804
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc------taggcaccctatttattcatcttaa 147  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||| |||| || | |||||||||||||      ||||||||  | ||||||||||| |    
T  27054683 gtccccatgagcttagctcatttggtaagggataatgcacaatatctgcaggggccggggttcgaacccccggcataggcacctcacttattcatcttta 27054782  T
Q  148 agatgaatttttctagctacta 169  Q
    || ||||||| |||||| ||||    
T  27054783 aggtgaatttctctagccacta 27054804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 50065002 - 50065124
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||| ||| ||||||||| | ||||||| ||||||||||||||||| || | |||||||||| |   | ||||| | ||||||||||| ||| ||    
T  50065002 tgtccccataagcttagctcatttgataagggataatgcacaatatgtgcagggaccggggttcgaatctcggacaccccacttattcatctttaaggtg 50065101  T
Q  153 aatttttctagctactaaactac 175  Q
    ||||| |||||| ||||| ||||    
T  50065102 aatttctctagccactaagctac 50065124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 536
Target Start/End: Original strand, 1138576 - 1138724
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    ||||||||||||| | ||||||||||||||| ||||| |||| ||||||| ||||  |||  ||||||| || | | | ||||||||||||||||||||     
T  1138576 ccatttggggttgacctagtggttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcgaatctctc-tagtgccaatttcggtggacaag 1138674  T
Q  488 ttcatacataac-ttgctatggcttagaacagagccctcgtaagtgggca 536  Q
    | |||||| | | ||||| || |||||||||| ||||| | |||||||||    
T  1138675 tccatacagagctttgctctgacttagaacagggcccttgcaagtgggca 1138724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 50302940 - 50302832
Alignment:
Q  67 tagctcattcggtaagggacaatgcacaatatgtgcat-ggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagct 165  Q
    ||||||||| ||||||||| |||||| ||||||||||  || |||||||||||||||| | ||| ||| ||||||||||| ||| ||||||| ||||||     
T  50302940 tagctcatttggtaagggataatgcataatatgtgcagagggctggggttcgaaccct-gacactctacttattcatctttaaggtgaatttctctagcc 50302842  T
Q  166 actaaactac 175  Q
    |||| |||||    
T  50302841 actagactac 50302832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 7438617 - 7438740
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    ||||||||| ||||||||| ||||||||| |||||||||| |||| | ||   ||||||||||| |  | ||||| | ||||||||||||||| ||||||    
T  7438617 cccatgagcttagctcatttggtaagggataatgcacaatttgtgtaggggtcggggttcgaactccggacaccccacttattcatcttaaaggtgaatt 7438716  T
Q  157 tttctagctactaaactacctgac 180  Q
    | | |||| |||| ||||| ||||    
T  7438717 tctttagccactagactacttgac 7438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 49619965 - 49620080
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||   |||||||  ||||  | ||||| | ||||||||||| ||  |||    
T  49619965 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcagaccccggacaccccacttattcatctttaaagtga 49620064  T
Q  154 atttttctagctacta 169  Q
    |||| |||||| ||||    
T  49620065 atttctctagccacta 49620080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 4621437 - 4621344
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  4621437 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 4621344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 15059602 - 15059509
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||||||    |  |||| |||||||||| | | ||||||||||||||||||    
T  15059602 ccatttggggttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattctctc-tggtgccaatttcggtgg 15059509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 22386338 - 22386260
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccct 132  Q
    ||||||| |||| ||||||||| |||||||||  |||||||||||||||| ||  |||||||||||||| || ||||||    
T  22386338 gtccccacgagcttagctcatttggtaagggattatgcacaatatgtgcaggggttggggttcgaaccccagacaccct 22386260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 24674390 - 24674483
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  24674390 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 24674483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 46607807 - 46607900
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  46607807 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 46607900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 14262820 - 14262707
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    ||||||||  || |||||| | ||||||| |||||||||||| |||| ||   |||||||||||||  | ||||||| ||||||||||| ||| ||||||    
T  14262820 cccatgagattaactcatttgataagggataatgcacaatatatgcaggggtcggggttcgaaccccggacaccctacttattcatctttaaggtgaatt 14262721  T
Q  157 tttctagctactaa 170  Q
    | |||||| |||||    
T  14262720 tctctagccactaa 14262707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 482
Target Start/End: Original strand, 24122021 - 24122113
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||||||||||||||||||  ||||| | ||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  24122021 catttggggttggcttagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 24122113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 458
Target Start/End: Original strand, 37349521 - 37349590
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgatt 458  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||| |||   |||| |||||||||    
T  37349521 catttggggttggtttagtggttgacttgagatcttagagtttgctcctctcatgatctcaggttcgatt 37349590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 47428994 - 47428881
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    ||||||||  ||||||||  ||||||||| | | |||||||||||||||| ||||||||||||||| |  ||||| | ||||||||||| ||  ||||||    
T  47428994 cccatgagtttagctcatctggtaagggatagtacacaatatgtgcatgggctggggttcgaaccccaaacaccccacttattcatctttaaagtgaatt 47428895  T
Q  157 tttctagctactaa 170  Q
    | | |||| |||||    
T  47428894 tctttagccactaa 47428881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 535
Target Start/End: Original strand, 8077644 - 8077791
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 486  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||| | | |||||||||||||||||| | ||    
T  8077644 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctc-tggtgccaatttcggtgggctaa 8077742  T
Q  487 attcatacataacttgctatggcttagaacagagccctcgtaagtgggc 535  Q
     | |||||| | |||||| ||||||  ||||| |||| || ||||||||    
T  8077743 gtccatacagagcttgctctggctttaaacagggcccccgcaagtgggc 8077791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 157
Target Start/End: Original strand, 8893852 - 8893956
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||| ||||||| ||| ||||| ||||||||| |||||||||||||| || ||   ||||||||||||| |  ||||| | ||||||||||| ||| ||    
T  8893852 tgtccacatgagcttagttcatttggtaagggataatgcacaatatgtacaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtg 8893951  T
Q  153 aattt 157  Q
    |||||    
T  8893952 aattt 8893956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 30325072 - 30325024
Alignment:
Q  127 caccctatttattcatcttaaagatgaatttttctagctactaaactac 175  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  30325072 caccctatttattcatctttaagatgaatttctctagccactaaactac 30325024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 436
Target Start/End: Original strand, 47091687 - 47091735
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcc 436  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  47091687 ccatttggggttggcctagtggttggcttgagatcttggagtttgctcc 47091735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 48497312 - 48497200
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    ||||||||  ||||||||| ||||||||| ||||||||||||||||| || | || ||||||| ||  | ||| | ||||||||||||| ||| | ||||    
T  48497312 cccatgagtttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcgaatcccggacactccatttattcatctttaaggtaaatt 48497213  T
Q  157 tttctagctacta 169  Q
    | |||||| ||||    
T  48497212 tctctagccacta 48497200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 495
Target Start/End: Original strand, 24216975 - 24217081
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    ||||||||||||| | ||||||||| ||||  ||||| |||| ||||||| ||||  |||| ||||||||| ||  |||||||||||||||||||  |||    
T  24216975 ccatttggggttgacctagtggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacc-tttggtgccaatttcggtgggtaaa 24217073  T
Q  488 ttcataca 495  Q
    | ||||||    
T  24217074 tccataca 24217081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 25800435 - 25800332
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    ||||| |||| | ||| ||||||||||||||| |||||||||| | || | |||| ||||||| |||||  | ||||| | ||||||||||||||| |||    
T  25800435 gtcccaatgaacttagttcattcggtaagggataatgcacaatttatgtagggtccggggttccaaccccggacaccccacttattcatcttaaaggtga 25800336  T
Q  154 attt 157  Q
    ||||    
T  25800335 attt 25800332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 40061436 - 40061551
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| || |||||| ||||||||| | ||||||||||||  | || ||||||||||||| |  | ||||| | ||||||||||| ||| ||     
T  40061436 gtccccatgagcttaactcatttggtaagggatagtgcacaatatgtataggggctggggttcgaactccggacaccccacttattcatctttaaggtgg 40061535  T
Q  154 atttttctagctacta 169  Q
    |||| |||||| ||||    
T  40061536 atttctctagccacta 40061551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 4126892 - 4127018
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||  ||||||||| ||||||||| |||||||||||| ||||  | | |  ||| |||| |  | ||||| ||||||||||||| ||| |||    
T  4126892 gtccccatgagtttagctcatttggtaagggataatgcacaatatatgcagaggccgatgtttgaacaccggacaccccatttattcatctttaaggtga 4126991  T
Q  154 atttttctagctactaaactacctgac 180  Q
    |||| |||||| |||| ||||| ||||    
T  4126992 atttatctagccactagactacttgac 4127018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 7197446 - 7197353
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | || |||||||||||||||    
T  7197446 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tgatgccaatttcggtgg 7197353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 39304306 - 39304256
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca 103  Q
    ||||||||||||| ||||||||| ||||||||| |||||| ||||||||||    
T  39304306 tgtccccatgagcttagctcatttggtaagggataatgcataatatgtgca 39304256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 18533924 - 18533875
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||| | ||||||||| ||||| ||||||||||||||||||    
T  18533924 ccatttggggttgacatagtggttgacttgagatcttagagtttgctcct 18533875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 34778339 - 34778388
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  34778339 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 34778388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 2272342 - 2272390
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    |||||||||||||| ||||||||| ||||  ||||||||||||||||||    
T  2272342 catttggggttggcctagtggttgacttgggatcttagagtttgctcct 2272390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 15550879 - 15550926
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtg 101  Q
    |||||||||||| || |||||| ||||||||| |||||||||||||||    
T  15550879 gtccccatgagcttatctcatttggtaagggataatgcacaatatgtg 15550926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 483
Target Start/End: Complemental strand, 20487390 - 20487296
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgga 483  Q
    |||||||||||||| ||||||||||||| |  ||||| ||||||||||||    |  ||||  ||||||||||| | |||||||||||||||||||    
T  20487390 ccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctc-tggtgccaatttcggtgga 20487296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 35527437 - 35527390
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtg 101  Q
    |||||||||| | ||||||||| ||||||||| |||||||||||||||    
T  35527437 gtccccatgaacttagctcatttggtaagggataatgcacaatatgtg 35527390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 435
Target Start/End: Complemental strand, 40802267 - 40802220
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctc 435  Q
    ||||||||||||||||| ||||||||||||| || || ||||||||||    
T  40802267 ccatttggggttggctttgtggttggcttgagatattggagtttgctc 40802220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 12973381 - 12973331
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca 103  Q
    ||||||||||||  ||||||||| ||||||||| |||||||||||| ||||    
T  12973381 tgtccccatgagtttagctcatttggtaagggataatgcacaatatatgca 12973331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 23734113 - 23734206
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||| ||||| |||||||||  |||||||| |||||||||    |  |||| |||||||||||| | || |||||||||||||||    
T  23734113 ccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctc-tgatgccaatttcggtgg 23734206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 23741305 - 23741398
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||| ||||| |||||||||  |||||||| |||||||||    |  |||| |||||||||||| | || |||||||||||||||    
T  23741305 ccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctc-tgatgccaatttcggtgg 23741398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 478
Target Start/End: Complemental strand, 29057537 - 29057448
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcg 478  Q
    ||||||||||||||| |||||||||| |||  ||||| ||||||||| ||   ||  |||| |||||||||||| ||| ||||||||||||    
T  29057537 ccatttggggttggcctagtggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccctctt-gtgccaatttcg 29057448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 436
Target Start/End: Original strand, 52592555 - 52592605
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcc 436  Q
    |||||||| | |||||  ||||||||||||||| |||||||||||||||||    
T  52592555 atccatttagagttggtctagtggttggcttgagatcttagagtttgctcc 52592605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 27455066 - 27455017
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    
T  27455066 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcct 27455017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 511
Target Start/End: Original strand, 1378903 - 1379018
Alignment:
Q  396 ggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aaattcatac 494  Q
    ||||||||||||||||| ||||  ||||| ||||||||||||   ||| ||||  |||||||| || | ||||| |||||||||||| | || | |||||    
T  1378903 ggttggcttagtggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatttcctc-tggtgtcaatttcggtgggctaagtccatac 1379001  T
Q  495 ataacttgctatggctt 511  Q
    | |||||||| ||||||    
T  1379002 agaacttgctctggctt 1379018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 42937308 - 42937228
Alignment:
Q  77 ggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaattt 157  Q
    ||||||| | ||||||||||||||||| ||  ||| ||||||||   || |||| |||||||||||||| ||| |||||||    
T  42937308 ggtaaggaataatgcacaatatgtgcaggggttggagttcgaacttcagacaccttatttattcatctttaaggtgaattt 42937228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 458
Target Start/End: Original strand, 52135125 - 52135197
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgatt 458  Q
    ||||||||||||||||  ||||||||| ||||  ||||| |||||||||| | ||||  |||| |||||||||    
T  52135125 atccatttggggttggtctagtggttgacttgggatcttggagtttgctcatctcaatgtctcaggttcgatt 52135197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 2e-26; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 1032564 - 1032673
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaa 154  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||| || ||||| | ||||||||||| ||| ||||    
T  1032564 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaa 1032663  T
Q  155 tttttctagc 164  Q
    ||| ||||||    
T  1032664 tttctctagc 1032673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 44828539 - 44828444
Alignment:
Q  50 atctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatctt 145  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||||| |||||| |||||||||||||||||| || ||||  | |||||||||||    
T  44828539 atctgtccccatgagcttagctcatttggtaagggataatgcacaatttgtgcagggtctggggttcgaaccccagacaccacacttattcatctt 44828444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 41454930 - 41454819
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||  | ||||| | ||||||||||| ||  ||    
T  41454930 tgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaatgtg 41454831  T
Q  153 aatttttctagc 164  Q
    ||||| ||||||    
T  41454830 aatttctctagc 41454819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 53 - 145
Target Start/End: Original strand, 30466671 - 30466763
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatctt 145  Q
    ||||||||||||| ||||||||| ||||||||  ||||||||||||||||| || ||||||||||||||  || ||||| | |||||||||||    
T  30466671 tgtccccatgagcttagctcatttggtaagggctaatgcacaatatgtgcaggggctggggttcgaacctcagacaccccacttattcatctt 30466763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 53 - 157
Target Start/End: Complemental strand, 41845532 - 41845428
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    |||| |||||||| ||||||||| ||||||||| ||||||||||||||||| ||   |||||||||||||    ||||||||||||||||||| ||| ||    
T  41845532 tgtctccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggatcggggttcgaaccccgaacaccctatttattcatctttaaggtg 41845433  T
Q  153 aattt 157  Q
    |||||    
T  41845432 aattt 41845428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 386 - 495
Target Start/End: Complemental strand, 34694778 - 34694670
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggaca 485  Q
    ||||||||||||||||  ||||||||| ||||  ||||| |||||||||||| ||||  |||  ||||||||| |||  |||||||||||||||||| ||    
T  34694778 atccatttggggttggtctagtggttgacttgtgatcttggagtttgctcctctcaaggtcttaggttcgatt-ccatctggtgccaatttcggtgggca 34694680  T
Q  486 aattcataca 495  Q
    ||||||||||    
T  34694679 aattcataca 34694670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 13906728 - 13906660
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||    
T  13906728 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccc 13906660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 38289334 - 38289211
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    ||||| ||| ||||||||| ||||||||| ||||||||||||||||| ||   ||||||||||||  |  ||||| | ||||||||||| ||| ||||||    
T  38289334 cccataagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaacctcaaacaccccacttattcatctttaaggtgaatt 38289235  T
Q  157 tttctagctactaaactacctgac 180  Q
    | |||||| ||||| |||| ||||    
T  38289234 tctctagccactaagctacttgac 38289211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 3734823 - 3734730
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  3734823 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 3734730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 4718646 - 4718739
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| |||||||||||||   |  |||| |||||||||||| | ||||||||||||||||||    
T  4718646 ccatttggggttggcctagtggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 4718739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 4259850 - 4259967
Alignment:
Q  52 ctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagat 151  Q
    |||||| ||||||| || |||||| ||||||||| ||||||||||||||||| || | ||||||| |||||  | | ||| | ||||||||||| ||| |    
T  4259850 ctgtccgcatgagcttaactcatttggtaagggataatgcacaatatgtgcaggggccggggttccaaccccggactccccacttattcatctttaaggt 4259949  T
Q  152 gaatttttctagctacta 169  Q
    |||||| |||||| ||||    
T  4259950 gaatttctctagccacta 4259967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 162
Target Start/End: Original strand, 38063969 - 38064078
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||| ||  ||||| ||||||||| |||||||||| |||||| || |||||| | |||||| || ||||| | ||||||||||| ||| ||    
T  38063969 tgtccccatgagcttaattcatttggtaagggataatgcacaatttgtgcagggactgggggttgaaccccagacaccccacttattcatctttaaggtg 38064068  T
Q  153 aatttttcta 162  Q
    ||||| ||||    
T  38064069 aatttctcta 38064078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 10161957 - 10162025
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||||| ||||||||  ||||||||| ||||||||||||||||| ||  ||||||||||||||    
T  10161957 gtccccatgagcttagctcatctggtaagggataatgcacaatatgtgcaggggttggggttcgaaccc 10162025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 482
Target Start/End: Complemental strand, 27746537 - 27746442
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||||| |||||||||| |||  ||||| ||||||||||||   ||  |||| ||||||||||||  |||||||||||||||||||    
T  27746537 atccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc-tttggtgccaatttcggtgg 27746442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 5904463 - 5904360
Alignment:
Q  67 tagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagcta 166  Q
    ||||||||| |||||  || ||||||||||||||||| ||   |||||||||||||  | || || | ||||||||||| ||||||||||| ||||||||    
T  5904463 tagctcatttggtaaaagataatgcacaatatgtgcaggggacggggttcgaaccccggacatcccacttattcatctttaagatgaatttctctagcta 5904364  T
Q  167 ctaa 170  Q
    ||||    
T  5904363 ctaa 5904360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 12831562 - 12831628
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaa 119  Q
    ||||||||||||  || |||||| ||||| ||||||||||||||||||||| ||||||| |||||||    
T  12831562 tgtccccatgagtttaactcatttggtaaaggacaatgcacaatatgtgcagggtctggagttcgaa 12831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 34237855 - 34237762
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  34237855 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 34237762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 20305909 - 20305958
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  20305909 ccatttggggttggcctagtggttggcttgggatcttagagtttgctcct 20305958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 21092542 - 21092591
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  21092542 ccatttggggttggcctagtggttggcttgggatcttagagtttgctcct 21092591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 39104613 - 39104725
Alignment:
Q  67 tagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagcta 166  Q
    ||||||||| ||||||||| |||||||||||||||||  | | |||||||||||||  | ||||| | ||||||||||| ||| || |||| |||||| |    
T  39104613 tagctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggacaccc-acttattcatctttaaggtggatttctctagcca 39104711  T
Q  167 ctaaactacctgac 180  Q
    ||| ||||| ||||    
T  39104712 ctagactacttgac 39104725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 495
Target Start/End: Complemental strand, 8387645 - 8387538
Alignment:
Q  387 tccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaa 486  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||||| || |||   ||||  |||||||| || | |||||||||||| ||||| |||    
T  8387645 tccatttggggttggcctagtggttgtcttgagatcttagagtttgcttctctcagggtctcaagttcgatttcctc-tggtgccaattttggtgggcaa 8387547  T
Q  487 attcataca 495  Q
     | ||||||    
T  8387546 gtccataca 8387538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 28193477 - 28193568
Alignment:
Q  390 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  28193477 atttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 28193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 1360231 - 1360129
Alignment:
Q  59 catgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttt 158  Q
    ||||||| ||||||||| || || ||| ||||||||||||||| | || |||||||||||||||  | ||||| | |||||||| |||||| |||||||     
T  1360231 catgagcttagctcatttggcaaaggataatgcacaatatgtgtaggggctggggttcgaaccccggacaccccacttattcattttaaag-tgaatttc 1360133  T
Q  159 tcta 162  Q
    ||||    
T  1360132 tcta 1360129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 3311436 - 3311543
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    ||||||||| || |||||| || |||||| |||| ||||| | |||| ||    ||||||||||||  | ||||| | ||||||||||||||||||||||    
T  3311436 cccatgagcttaactcatttggcaagggataatgtacaatttatgcagggatcagggttcgaaccccggacaccccacttattcatcttaaagatgaatt 3311535  T
Q  157 tttctagc 164  Q
    ||||||||    
T  3311536 tttctagc 3311543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 26169048 - 26168942
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    |||||| |||||||| |||||||| |||||  ||||| |||||||||||| ||||  |||| |||| |||| || | || ||||||||||||||| |||     
T  26169048 ccatttagggttggcctagtggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgatt-cctcctgatgccaatttcggtgggcaag 26168950  T
Q  488 ttcataca 495  Q
    ||||||||    
T  26168949 ttcataca 26168942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 43413964 - 43413873
Alignment:
Q  78 gtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagctacta 169  Q
    |||||||| |||||||||| |||||| || |||||||||||| || |  ||||| | ||||||||||| ||| ||||||| |||||| ||||    
T  43413964 gtaagggataatgcacaatttgtgcaggggctggggttcgaatcccaaacaccccacttattcatctttaaggtgaatttctctagccacta 43413873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 28964034 - 28964127
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||  |||||||||| |||| |||||||||||||||||| | ||  | ||  |||||||| |||  ||||||||||||||||||    
T  28964034 ccatttggggttggtctagtggttggtttgagatcttagagtttgctcctcttaaggtttcatgttcgatt-ccatctggtgccaatttcggtgg 28964127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 145
Target Start/End: Complemental strand, 36104019 - 36103933
Alignment:
Q  59 catgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatctt 145  Q
    ||||||| || |||||| ||||| ||| ||||||||||||||||| || | ||||||||||||| |  ||||| | |||||||||||    
T  36104019 catgagcttaactcatttggtaaaggataatgcacaatatgtgcaggggccggggttcgaaccccaaacaccccacttattcatctt 36103933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 39349257 - 39349350
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||||  |||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  39349257 ccatttggggttggcccagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 39349350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 2618187 - 2618236
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  2618187 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 2618236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 18532108 - 18532157
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  18532108 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 18532157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 19471610 - 19471659
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  19471610 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 19471659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 19542534 - 19542583
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  19542534 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 19542583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 19590162 - 19590113
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  19590162 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 19590113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 497
Target Start/End: Original strand, 41070767 - 41070870
Alignment:
Q  393 tggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaattcat 492  Q
    |||||||||| ||||||||| ||||  ||||| |||| |||| || ||||  ||||  |||||||||||  |||||| |||||||||||| ||| |||||    
T  41070767 tggggttggcctagtggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgattccct-ttggtgtcaatttcggtgggcaagttcat 41070865  T
Q  493 acata 497  Q
    |||||    
T  41070866 acata 41070870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 280084 - 279990
Alignment:
Q  68 agctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctag 163  Q
    |||||||| ||||||||| |||| |||||||||||| ||  | ||||||||||||  | ||||| |||||||||| || ||| ||||||| |||||    
T  280084 agctcatttggtaagggataatgtacaatatgtgca-ggggtagggttcgaaccccggacacccaatttattcatttttaaggtgaatttctctag 279990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 635768 - 635862
Alignment:
Q  68 agctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctag 163  Q
    |||||||| ||||||||| |||| |||||||||||| ||  | ||||||||||||  | ||||| |||||||||| || ||| ||||||| |||||    
T  635768 agctcatttggtaagggataatgtacaatatgtgca-ggggtagggttcgaaccccggacacccaatttattcatttttaaggtgaatttctctag 635862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 821571 - 821665
Alignment:
Q  68 agctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctag 163  Q
    |||||||| ||||||||| |||| |||||||||||| ||  | ||||||||||||  | ||||| |||||||||| || ||| ||||||| |||||    
T  821571 agctcatttggtaagggataatgtacaatatgtgca-ggggtagggttcgaaccccggacacccaatttattcatttttaaggtgaatttctctag 821665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 33820490 - 33820389
Alignment:
Q  61 tgagcatagctcattcggtaagggacaatgcacaatatgtgcat-ggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaattttt 159  Q
    ||||| ||||||||| |||| |||| ||| |||||| ||||||  |||| |||||||||| || || ||||| | ||||||||||||||| ||||||| |    
T  33820490 tgagcttagctcatttggtatgggataatacacaatttgtgcagaggtc-ggggttcgaatcccagacaccccaattattcatcttaaaggtgaatttct 33820392  T
Q  160 cta 162  Q
    |||    
T  33820391 cta 33820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 142
Target Start/End: Original strand, 23139066 - 23139155
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcat 142  Q
    ||||||||||||| ||||||||| |  |||||| |||||||||| |||||| || | | ||||||||| | || ||||| | ||||||||    
T  23139066 tgtccccatgagcttagctcatttgacaagggataatgcacaatgtgtgcaggggccgaggttcgaacaccagacaccccacttattcat 23139155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 28465781 - 28465826
Alignment:
Q  390 atttggggttggcttagtggttggcttgaaatcttagagtttgctc 435  Q
    |||||| ||||| |||||||||| ||||||||||||||||| ||||    
T  28465781 atttggagttggtttagtggttgacttgaaatcttagagttggctc 28465826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 30623294 - 30623354
Alignment:
Q  61 tgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    ||||| ||||||| | ||||||| |||||||| ||||| |||| ||||||||||||||||||    
T  30623294 tgagcttagctcagttggtaagg-acaatgcataatatatgcaaggtctggggttcgaaccc 30623354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 42643318 - 42643269
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  42643318 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcct 42643269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 43508552 - 43508447
Alignment:
Q  52 ctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagat 151  Q
    ||||| ||| |||||||||||| | | |||||||||||||| ||||| || | || | |||||| ||||||  | ||||| | ||||||| ||||||| |    
T  43508552 ctgtctccaagagcatagctcagttgataagggacaatgcataatatatgtaggggccggggtttgaaccccggacaccccacttattcaccttaaaggt 43508453  T
Q  152 gaattt 157  Q
    ||||||    
T  43508452 gaattt 43508447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 482
Target Start/End: Complemental strand, 34639408 - 34639314
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||| |  ||||||||||||||  ||||| |||| ||||||| ||||  |||| || |||| |||| | ||||||||||||||||||    
T  34639408 atccatttggggttagtctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcga-tccctc-tggtgccaatttcggtgg 34639314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 38545010 - 38544974
Alignment:
Q  70 ctcattcggtaagggacaatgcacaatatgtgcatgg 106  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  38545010 ctcatttggtaagggataatgcacaatatgtgcatgg 38544974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 38763554 - 38763514
Alignment:
Q  83 ggacaatgcacaatatgtgcatggtctggggttcgaaccct 123  Q
    |||||||||| ||||| |||| |||||||||||||||||||    
T  38763554 ggacaatgcataatatatgcaaggtctggggttcgaaccct 38763514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 6e-26; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 33528308 - 33528192
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||| |||||| || ||||||||||||||| || ||||| | ||||||||||| ||| ||    
T  33528308 tgtccccatgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtg 33528209  T
Q  153 aatttttctagctacta 169  Q
    ||||| |||||| ||||    
T  33528208 aatttctctagccacta 33528192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 39739270 - 39739393
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||||||  | ||||  | ||||||||||| ||| ||||||    
T  39739270 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccccggacacctcacttattcatctttaaggtgaatt 39739369  T
Q  157 tttctagctactaaactacctgac 180  Q
    | |||||| |||| ||||| ||||    
T  39739370 tctctagccactagactacttgac 39739393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 16141456 - 16141347
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||||||| ||||| | ||||||| |||||||||||||| || || ||||||||||||| | || ||||| | ||||||||||||||| |     
T  16141456 tgtccccatgagcatagttcatttgataagggataatgcacaatatgtacaagggctggggttcgaactccagacaccccacttattcatcttaaaggta 16141357  T
Q  153 aatttttcta 162  Q
    ||||| ||||    
T  16141356 aatttatcta 16141347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 47864631 - 47864744
Alignment:
Q  56 ccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaat 155  Q
    |||||| ||| ||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||||||  | ||||| | ||||||||||| ||| |||||    
T  47864631 ccccataagcttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggacaccccacttattcatctttaaggtgaat 47864730  T
Q  156 ttttctagctacta 169  Q
    || |||||| ||||    
T  47864731 ttctctagccacta 47864744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 11483605 - 11483732
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||| ||||||||| ||||||||| |||||| |||||||||| || |  |||||||||| |  | ||||| | ||||||||||| ||| ||    
T  11483605 tgtccccatgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccagggttcgaactccggacaccccacttattcatctttaaggtg 11483704  T
Q  153 aatttttctagctactaaactacctgac 180  Q
    ||||| |||||| |||| ||||| ||||    
T  11483705 aatttctctagcaactagactacttgac 11483732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 46247253 - 46247330
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccc 131  Q
    |||||||||||| ||||||||| ||||||||| |||||||||| |||||| || ||||||||||||||| || |||||    
T  46247253 gtccccatgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccc 46247330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 30162650 - 30162718
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||    
T  30162650 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaagggccggggttcgaaccc 30162718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 25165434 - 25165501
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||    
T  25165434 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggaccggggttcgaaccc 25165501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 2259150 - 2259259
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | || |||| ||||| || || |||| ||||||||||| ||| | |    
T  2259150 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcaaaccccagaca-cctacttattcatctttaaggtaa 2259248  T
Q  154 atttttctagc 164  Q
    |||| ||||||    
T  2259249 atttatctagc 2259259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 32421341 - 32421467
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||||||||  ||||||||| |||||| ||||| |||| ||   ||||||||||||     | ||| | ||||||||||| |||||||    
T  32421341 gtccccatgagcttagctcatctggtaagggataatgcataatatatgcaggggtcggggttcgaacctcgaactccccacttattcatctttaagatga 32421440  T
Q  154 atttttctagctactaaactacctgac 180  Q
    ||||||||||| |||||||||| ||||    
T  32421441 atttttctagccactaaactacttgac 32421467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 55287800 - 55287850
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctt 438  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  55287800 ccatttggggttggcatagtggttggcttggaatcttagagtttgctcctt 55287850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 484
Target Start/End: Original strand, 30257621 - 30257716
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac 484  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| ||||||||||||  ||||||||||||||| |||||    
T  30257621 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc-tttggtgccaatttcgatggac 30257716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 55426107 - 55426175
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||||| ||||||||| ||||| ||| |||||||||||||||||||| | | |||||||||||    
T  55426107 gtccccatgagcttagctcatttggtaaaggataatgcacaatatgtgcatgggccgaggttcgaaccc 55426175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 27817169 - 27817055
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    ||||| |||||| || |||||| ||||||||| |||||||||| |||||| || | || ||||||||||  | ||||| ||||||||||||| ||| |||    
T  27817169 gtccctatgagcttacctcatttggtaagggataatgcacaatttgtgcaggggccggagttcgaacccg-gacaccccatttattcatctttaagttga 27817071  T
Q  154 atttttctagctacta 169  Q
    |||| |||||| ||||    
T  27817070 atttctctagccacta 27817055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 29226320 - 29226427
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaa 154  Q
    ||||||||||| ||||||||| ||||||||| ||  ||||||||||||| || | |||||||||||||    ||||| | ||||||||||| ||| ||||    
T  29226320 tccccatgagcttagctcatttggtaagggataacacacaatatgtgcaggggccggggttcgaaccccgtacaccccacttattcatctttaaggtgaa 29226419  T
Q  155 tttttcta 162  Q
    ||| ||||    
T  29226420 tttctcta 29226427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 145
Target Start/End: Original strand, 46798575 - 46798666
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatctt 145  Q
    |||||||||||| || |||||| ||| ||||| ||||||||||||||||| || | ||| |||||||||| | ||||| | |||||||||||    
T  46798575 gtccccatgagcttaactcatttggtgagggataatgcacaatatgtgcaggggccgggattcgaaccctggacaccccacttattcatctt 46798666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 50381706 - 50381817
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||| || |||||| ||||||||| |||||||||||| |||| ||   |||||||||| ||  | ||||| | ||||||||||| ||| ||    
T  50381706 tgtccccatgagcttaactcatttggtaagggataatgcacaatatatgcaggggtcggggttcgaatcccggacaccccacttattcatctttaaggtg 50381805  T
Q  153 aatttttctagc 164  Q
    ||||| ||||||    
T  50381806 aatttctctagc 50381817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 8456350 - 8456257
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  8456350 ccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 8456257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 30807353 - 30807260
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  30807353 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 30807260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 35492908 - 35493001
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  35492908 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 35493001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 53424376 - 53424283
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| ||||||||||||  |||||||||||||||||||    
T  53424376 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc-tttggtgccaatttcggtgg 53424283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 4252596 - 4252508
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttc 477  Q
    ||||||||||||||| ||||||||||||||| ||||| |||| ||||||| ||||  ||||  ||| ||||||| | |||||||||||||    
T  4252596 ccatttggggttggcctagtggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctc-tggtgccaatttc 4252508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 461
Target Start/End: Original strand, 4462631 - 4462703
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattccc 461  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||| |||  ||| ||||  |||||||||||    
T  4462631 catttggggttggcctagtggttggcttgagatcttggagtttgctacttcaaaagtctcatgttcgattccc 4462703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 31419583 - 31419679
Alignment:
Q  61 tgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaattt 157  Q
    ||||| || |||||| |||||||||||| |||||||||||| | || ||||||||||||||| |  ||||| | ||||||| ||||||  |||||||    
T  31419583 tgagcttaactcatttggtaagggacaacgcacaatatgtgtaggggctggggttcgaaccccaaacaccccacttattcaccttaaaagtgaattt 31419679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 31435589 - 31435477
Alignment:
Q  68 agctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagctac 167  Q
    ||||||| |||||||||| ||||||||||||||| | ||  |||||||||||||   | || || | ||||||||||| ||| ||||||| |||||| ||    
T  31435589 agctcatccggtaagggataatgcacaatatgtgtaggggttggggttcgaacctcggacatcccacttattcatctttaaggtgaatttctctagccac 31435490  T
Q  168 taaactacctgac 180  Q
    || ||||| ||||    
T  31435489 tagactacttgac 31435477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 484
Target Start/End: Original strand, 40940822 - 40940917
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac 484  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||||    
T  40940822 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtggac 40940917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 7485725 - 7485632
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||   ||  |||| |||||||||||| | || |||||||||||||||    
T  7485725 ccatttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tgatgccaatttcggtgg 7485632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 27471513 - 27471623
Alignment:
Q  70 ctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagctacta 169  Q
    |||||| ||||||||| |||||| ||||||| || ||  ||||||||||||||  | ||||| | ||||||||||| ||| | ||||| |||||| ||||    
T  27471513 ctcatttggtaagggataatgcataatatgtacaggggttggggttcgaaccccggacaccccacttattcatctttaaggtaaatttctctagccacta 27471612  T
Q  170 aactacctgac 180  Q
     ||||| ||||    
T  27471613 gactacttgac 27471623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 34225187 - 34225237
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca 103  Q
    |||| |||||||| ||||||||| ||||||||| |||||||||||||||||    
T  34225187 tgtctccatgagcttagctcatttggtaagggataatgcacaatatgtgca 34225237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 40133649 - 40133556
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  || || ||||||||||||   ||  |||| |||||||||||| | ||||| ||||||||||||    
T  40133649 ccatttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgtcaatttcggtgg 40133556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 46576345 - 46576438
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||| ||||    
T  46576345 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcagtgg 46576438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 48977385 - 48977478
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||   ||  |||| |||||||||||  | ||||||||||||||||||    
T  48977385 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttc-tggtgccaatttcggtgg 48977478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 51391023 - 51390942
Alignment:
Q  404 tagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaa 486  Q
    ||||||||||||||| |||||||||||||||||| ||||  ||||   ||| |||||| ||| |||||||||||||| |||||    
T  51391023 tagtggttggcttgagatcttagagtttgctcctctcaagatctcaatttcaattccctctt-gtgccaatttcggtagacaa 51390942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 484
Target Start/End: Complemental strand, 18177087 - 18176992
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttca-aattctctggttcgattcccacttggtgccaatttcggtggac 484  Q
    ||||||||||||||| ||||||||| ||||| ||||| ||||||||| ||| || |  | || |||||||||||| | ||||||||||||||||||||    
T  18177087 ccatttggggttggcctagtggttgacttgagatcttggagtttgct-cttccagaggtatcaggttcgattccctc-tggtgccaatttcggtggac 18176992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 34492775 - 34492726
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  34492775 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 34492726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 45529954 - 45529905
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  45529954 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 45529905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 53207964 - 53208032
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccct 123  Q
    |||||| ||||| ||||||| | |||||||| ||||||| ||||| |||| |||||||||||||||||||    
T  53207964 gtccccgtgagcttagctcagttggtaaggg-caatgcataatatatgcaaggtctggggttcgaaccct 53208032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 986022 - 985906
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    |||||||||| || || || ||| ||||||| | |||||||||| |||||| || |||||||  ||| ||  | ||||| | ||||||||||||||| ||    
T  986022 tgtccccatgtgcttaacttatttggtaaggcataatgcacaatttgtgcaggggctggggtctgaatcccggacaccccacttattcatcttaaaggtg 985923  T
Q  153 aatttttctagctacta 169  Q
    ||||| |||||| ||||    
T  985922 aatttctctagccacta 985906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 511
Target Start/End: Complemental strand, 7470415 - 7470292
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 486  Q
    |||||||||||| || ||||||||| ||||| ||||| ||||||||||||   ||  |||| |||||||||||| | |  ||||||||||||||| | ||    
T  7470415 ccatttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctc-taatgccaatttcggtgggctaa 7470317  T
Q  487 attcatacataacttgctatggctt 511  Q
     |||||||| | |||||| ||||||    
T  7470316 gttcatacagagcttgctctggctt 7470292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 9321057 - 9320953
Alignment:
Q  58 ccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaattt 157  Q
    |||||||  ||||||||| | ||||||| |||| ||||| |||||| ||  ||||||||||| ||    ||||| | |||||||||||||||||||||||    
T  9321057 ccatgagtttagctcatttgataagggataatgtacaatttgtgcaggggttggggttcgaaacccgaacaccccacttattcatcttaaagatgaattt 9320958  T
Q  158 ttcta 162  Q
     ||||    
T  9320957 ctcta 9320953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 36590383 - 36590451
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||||  ||||||||| ||||||||| |||| |||||||||||| || | | |||||||||||    
T  36590383 gtccccatgagattagctcatttggtaagggataatgtacaatatgtgcaggggccgtggttcgaaccc 36590451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 482
Target Start/End: Complemental strand, 15566692 - 15566606
Alignment:
Q  395 gggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||    |  |||| |||||||||||| | | ||||||||||||||||    
T  15566692 gggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctc-tagtgccaatttcggtgg 15566606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 25344259 - 25344208
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  25344259 atccatttggggttggcctagtggttgacttgggatcttcgagtttgctcct 25344208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 25379760 - 25379807
Alignment:
Q  390 atttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  25379760 atttggggttggcctagtggttggcttgggatcttggagtttgctcct 25379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 45272616 - 45272523
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaat-tctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| |||| |||||||||  ||||| ||||||||||| | || || |||| | |||||||||| | ||||||||||||||||||    
T  45272616 ccatttggggttggcctagtcgttggcttgggatcttggagtttgctcc-tccagatgtctcagtttcgattccctc-tggtgccaatttcggtgg 45272523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 493
Target Start/End: Complemental strand, 55371483 - 55371381
Alignment:
Q  390 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaatt 489  Q
    ||||| ||||||| ||||||||||||||  || || |||| |||| || ||||  ||||  |||||||||||  |||||||||||||||| |||||| ||    
T  55371483 atttgaggttggcctagtggttggcttgcgattttggagtatgcttctctcaaggtctcatgttcgattccct-ttggtgccaatttcggcggacaagtt 55371385  T
Q  490 cata 493  Q
    ||||    
T  55371384 cata 55371381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 25289914 - 25289821
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | | ||||||||||||||||    
T  25289914 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tagtgccaatttcggtgg 25289821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 29645889 - 29645803
Alignment:
Q  94 aatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagctactaaactacctgac 180  Q
    |||||||||| || | |||||||||||||  | ||||| | ||||||||||| ||| ||||||| |||||| |||| ||||| ||||    
T  29645889 aatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagccactagactacttgac 29645803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 42913497 - 42913431
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaac 120  Q
    ||||||| |||| ||||||||| | ||||||| ||||||||||||||||| ||  || |||||||||    
T  42913497 gtccccacgagcttagctcatttgctaagggaaaatgcacaatatgtgcagggattgaggttcgaac 42913431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 1149140 - 1149068
Alignment:
Q  50 atctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccct 123  Q
    |||||||| | ||||| ||||||| | ||||||| |||||||| ||||| |||| ||||| |||||||||||||    
T  1149140 atctgtcctcgtgagcttagctcagttggtaagg-acaatgcataatatatgcaaggtctagggttcgaaccct 1149068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 6041871 - 6041818
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaa 442  Q
    |||||||||||| | || |||||| ||||||||||| |||||||||||| ||||    
T  6041871 catttggggttgccctaatggttgacttgaaatcttggagtttgctcctctcaa 6041818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 13829118 - 13829077
Alignment:
Q  81 agggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||||| ||||| |||| ||||||||||||||||||    
T  13829118 agggacaatgcataatatatgcaaggtctggggttcgaaccc 13829077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 21362940 - 21362989
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  21362940 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcct 21362989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 482
Target Start/End: Original strand, 26158816 - 26158908
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||| ||   |||||||||| ||||| |||| ||||||| ||||  |||| ||||  ||||||  |||||||||||||||||||    
T  26158816 catttggggttggcctatgtgttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccc-tttggtgccaatttcggtgg 26158908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 31538038 - 31537989
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| |||||||||||||   ||||| ||||||||||||    
T  31538038 ccatttggggttggcctagtggttggcttaggatcttggagtttgctcct 31537989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 50582989 - 50583038
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| |||||||||| |||  ||||| ||||||||||||    
T  50582989 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcct 50583038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 52455849 - 52455800
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| |||||||||||| |  ||||| ||||||||||||    
T  52455849 ccatttggggttggcctagtggttggctagggatcttggagtttgctcct 52455800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 21914138 - 21914071
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||||| || |||| | ||||||| |||||||| ||||| |||| ||| ||||||||||||||    
T  21914138 gtccccatgagcttaactcagttggtaagg-acaatgcataatatatgcaaggtatggggttcgaaccc 21914071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 25505768 - 25505701
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||||| || |||| |  |||||| |||||||| ||||| |||| ||||||||||||||||||    
T  25505768 gtccccatgagcttaactcagtttgtaagg-acaatgcataatatatgcaaggtctggggttcgaaccc 25505701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 55494682 - 55494749
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaacc 121  Q
    ||||||| ||||||||||||| | |||| ||||||||||| ||||| || | || ||||||||||||||    
T  55494682 tgtccccgtgagcatagctcaattggta-gggacaatgcataatatatgtaaggactggggttcgaacc 55494749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 4e-24; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 6228364 - 6228247
Alignment:
Q  52 ctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagat 151  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||  | ||||| | ||||||||||| ||| |    
T  6228364 ctgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 6228265  T
Q  152 gaatttttctagctacta 169  Q
    |||||| |||||| ||||    
T  6228264 gaatttctctagccacta 6228247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 18903469 - 18903354
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||||||||| || |||||| ||| ||||||||||||| || | |||||||||||||  | ||||| | ||||||||||| ||| |||    
T  18903469 gtccccatgagcttagctcatttggcaagggataatacacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtga 18903370  T
Q  154 atttttctagctacta 169  Q
    |||| |||||| ||||    
T  18903369 atttctctagccacta 18903354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 29322078 - 29321952
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||| ||||| | ||| ||||| ||||||||| ||||||||||||||||| || ||||||||||||||| || || || | ||||| ||||| ||| |||    
T  29322078 gtcctcatgaacttagatcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttatttatctttaaggtga 29321979  T
Q  154 atttttctagctactaaactacctgac 180  Q
    |||| |||||| |||| ||||| ||||    
T  29321978 atttctctagccactagactacttgac 29321952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 15717115 - 15717047
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||    
T  15717115 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccc 15717047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 24794991 - 24794871
Alignment:
Q  60 atgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaattttt 159  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||| ||  |||| |||||||||  | || || | |||||||| || ||||||||||| |    
T  24794991 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggttgggattcgaaccccggacatcccacttattcatatttaagatgaatttct 24794892  T
Q  160 ctagctactaaactacctgac 180  Q
    ||||| |||| |||| |||||    
T  24794891 ctagccactagactatctgac 24794871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 15360298 - 15360205
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  15360298 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 15360205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 20415663 - 20415549
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaa 154  Q
    ||||||||||  |||||||||  |||||||| ||||||||||||||||| || |  ||||||||||||  | ||||| | ||||||||||| ||| ||||    
T  20415663 tccccatgagtttagctcattttgtaagggataatgcacaatatgtgcaggggccagggttcgaaccccggacaccccacttattcatctttaaggtgaa 20415564  T
Q  155 tttttctagctacta 169  Q
    ||| |||||| ||||    
T  20415563 tttctctagccacta 20415549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 53 - 169
Target Start/End: Original strand, 11552863 - 11552979
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||| | ||| ||||||||| || |||||| || | ||||| |||||| || | ||||||||||||| |||||||| | ||||||||||| ||| |     
T  11552863 tgtccccttaagcttagctcatttggcaagggataacgtacaatgtgtgcaggggccggggttcgaaccccaggcaccccacttattcatctttaaggta 11552962  T
Q  153 aatttttctagctacta 169  Q
    |||||||||||| ||||    
T  11552963 aatttttctagccacta 11552979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 495
Target Start/End: Original strand, 9208249 - 9208355
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    |||||||||||||   |||||||||| |||  ||||| |||||||||||| ||||  |||| |||||||||||| | |||||||||||||||||| |||     
T  9208249 ccatttggggttgttctagtggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccc-cctggtgccaatttcggtgggcaag 9208347  T
Q  488 ttcataca 495  Q
    | ||||||    
T  9208348 tccataca 9208355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 34147343 - 34147436
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttca-aattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||| ||| || || |||| |||||||||||| | ||||||||||||||||||    
T  34147343 ccatttggggttggcctagtggttggcttgggatcttggagtttgct-cttccagaagtctcaggttcgattccctc-tggtgccaatttcggtgg 34147436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 34159959 - 34160052
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttca-aattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||| ||| || || |||| |||||||||||| | ||||||||||||||||||    
T  34159959 ccatttggggttggcctagtggttggcttgggatcttggagtttgct-cttccagaagtctcaggttcgattccctc-tggtgccaatttcggtgg 34160052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 9238972 - 9239065
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  9238972 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 9239065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 4854409 - 4854300
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||| ||||||||| || |||||| |||| ||||| |||||| || | |||||||||||||  | ||||| | ||||||||||| ||| |     
T  4854409 tgtccccatgagcttagctcatttggcaagggataatgtacaatgtgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggta 4854310  T
Q  153 aatttttcta 162  Q
    ||||| ||||    
T  4854309 aatttctcta 4854300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 33499471 - 33499565
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttc-gattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| | ||||||||||||  ||||| |||||||||||| ||||  |||| ||||| ||||||| | ||||| ||||||||||||    
T  33499471 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccctc-tggtgtcaatttcggtgg 33499565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 1128518 - 1128432
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatc 143  Q
    ||||||| | || |||||| | ||||||| |||||| |||||||||| ||  |||||||||||||| || ||||| |||||||||||    
T  1128518 cccatgaccttaactcatttgataagggataatgcataatatgtgcaggggttggggttcgaaccccagacaccccatttattcatc 1128432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 12591634 - 12591727
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | | ||||||||||| ||||    
T  12591634 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tcgtgccaatttcagtgg 12591727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 19748105 - 19748159
Alignment:
Q  67 tagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaacc 121  Q
    ||||||||| ||||||||| ||||||||||||||||| ||  |||||||||||||    
T  19748105 tagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaacc 19748159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 17216953 - 17217066
Alignment:
Q  56 ccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaat 155  Q
    |||||||||| ||||||||| ||||||||| |||||| |||||||| | ||   || |||||||| |  | ||||| | ||||||||||| ||| |||||    
T  17216953 ccccatgagcttagctcatttggtaagggataatgcataatatgtgtaggggtcggagttcgaactccggacaccccacttattcatctttaaggtgaat 17217052  T
Q  156 ttttctagctacta 169  Q
    || |||||| ||||    
T  17217053 ttctctagccacta 17217066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 22576064 - 22576113
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  22576064 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 22576113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 28672064 - 28672113
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||| ||||| ||||| ||||||||||||    
T  28672064 ccatttggggttggcctagtggttgacttgagatcttggagtttgctcct 28672113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 3222834 - 3222742
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttca-aattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  |||||  ||||||||||  ||| |  |||| |||||||||||| | ||||||||||||||||||    
T  3222834 ccatttggggttggcctagtggttggcttgggatcttgcagtttgctcc--tcagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 3222742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 21874322 - 21874258
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaa 119  Q
    ||||||| ||| || |||||| ||||||||| |||||||||||||||||||| | || |||||||    
T  21874322 tccccataagcttaactcatttggtaagggataatgcacaatatgtgcatgggcaggagttcgaa 21874258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 9843933 - 9843984
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||||  ||||||||||||||  ||||| ||||||||||||    
T  9843933 atccatttggggttggtctagtggttggcttgggatcttggagtttgctcct 9843984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 497
Target Start/End: Original strand, 10377714 - 10377820
Alignment:
Q  390 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaatt 489  Q
    |||||||||||||  ||| |||||||||| ||||| |||| ||||| | ||||  |||| ||||| ||||||   |||||||||||||||||| ||| |     
T  10377714 atttggggttggcccagttgttggcttgagatcttggagtgtgctcatgtcaaggtctcaggttcaattccc-tatggtgccaatttcggtgggcaagtc 10377812  T
Q  490 catacata 497  Q
    ||||||||    
T  10377813 catacata 10377820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 482
Target Start/End: Original strand, 11448871 - 11448961
Alignment:
Q  391 tttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||| | | ||||||||||||||||||    
T  11448871 tttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctc-tggtgccaatttcggtgg 11448961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 460
Target Start/End: Complemental strand, 8260556 - 8260486
Alignment:
Q  390 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcc 460  Q
    |||||||||||||||||||||||  ||  ||||||||||||||| ||||| ||  |||| | |||||||||    
T  8260556 atttggggttggcttagtggttgagtttgaatcttagagtttgccccttttaaggtctcagcttcgattcc 8260486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 9357163 - 9357257
Alignment:
Q  68 agctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttcta 162  Q
    |||||||| | ||||||| |||| ||||| |||||| || ||||||||||||| | || ||||  ||||||||| ||| ||| ||||||| ||||    
T  9357163 agctcatttgataagggataatgtacaatttgtgcaggggctggggttcgaactccagacacctaatttattcacctttaaggtgaatttctcta 9357257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 25045737 - 25045795
Alignment:
Q  58 ccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttc 116  Q
    |||||||| ||||||||| ||||||||| ||| ||||||||||||| || ||| |||||    
T  25045737 ccatgagcttagctcatttggtaagggataattcacaatatgtgcaggggctgaggttc 25045795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 13753237 - 13753286
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| |||||||||||||   ||||| ||||||||||||    
T  13753237 ccatttggggttggcctagtggttggctttggatcttggagtttgctcct 13753286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 21982520 - 21982471
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  |||||  |||||||||||    
T  21982520 ccatttggggttggcctagtggttggcttgggatcttgaagtttgctcct 21982471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 18618642 - 18618550
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatctt 145  Q
    ||||||||||||| ||||||||| |||||  || ||||||||||||||  | ||  ||||||||||| ||  | ||||| | |||||||||||    
T  18618642 tgtccccatgagcttagctcatttggtaaaagataatgcacaatatgtataagggttggggttcgaatcccggacaccccacttattcatctt 18618550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 419705 - 419820
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||||||||| ||||||||| |||| |||||||||||| || | |||||||||||||  | ||||| | ||||||||||| ||| |||    
T  419705 gtccccatgagcttagctcatttggtaagggataatgaacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtga 419804  T
Q  154 atttttctagctacta 169  Q
    |||| |||||| ||||    
T  419805 atttctctagccacta 419820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 11069448 - 11069334
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||| ||||||| ||||||||| ||||||| | ||||||||||||||||| ||| ||||||||||||||| | |||||    || ||||||| ||||||    
T  11069448 tgtccgcatgagcttagctcatttggtaaggaataatgcacaatatgtgcagggtttggggttcgaaccctggacaccc----tactcatctttaagatg 11069353  T
Q  153 aatttttctagctactaaa 171  Q
    ||||| |||||| ||||||    
T  11069352 aatttctctagccactaaa 11069334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 31149202 - 31149096
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaa 154  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| || ||||||||||| || ||||| | || || ||||| ||| ||||    
T  31149202 tccccatgagcatagctcatttggtaagggataatgcacaatatgtgcagggt-tgaggttcgaaccccagacaccccactttttaatctttaaggtgaa 31149104  T
Q  155 tttttcta 162  Q
    ||| ||||    
T  31149103 tttctcta 31149096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 43027149 - 43027274
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaa 154  Q
    ||||||||||| ||||||||| | ||||||| |||||||||| |||||  |  ||| ||||||||||| || ||||| ||||||||| ||| ||| ||||    
T  43027149 tccccatgagcttagctcatttgataagggataatgcacaatttgtgcgggtgctgaggttcgaaccccagacaccccatttattcacctttaaggtgaa 43027248  T
Q  155 tttttctagctactaaactacctgac 180  Q
    ||| |||||| |||| ||||| ||||    
T  43027249 tttctctagccactagactacttgac 43027274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 8192551 - 8192458
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| |||| ||||||| ||||  |||| |||||||||||| | |||||||||| |||||||    
T  8192551 ccatttggggttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctc-tggtgccaatgtcggtgg 8192458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 482
Target Start/End: Complemental strand, 4567639 - 4567544
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||||| |||| |||||||||  |||||  ||||||||||||   || |||| ||||||||| || | ||||||||||||||||||    
T  4567639 atccatttggggttggcctagtagttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatttcctc-tggtgccaatttcggtgg 4567544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 501
Target Start/End: Complemental strand, 4618880 - 4618773
Alignment:
Q  393 tggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaattcat 492  Q
    |||||||||| |||||||||||||| |||||| |||| ||||||| ||||  | || ||||||||| || | ||||||||||||||| || ||| | |||    
T  4618880 tggggttggcctagtggttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatttcc-cctggtgccaatttcggcgggcaagtccat 4618782  T
Q  493 acataactt 501  Q
    ||| |||||    
T  4618781 acaaaactt 4618773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 535
Target Start/End: Original strand, 15037956 - 15038103
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 486  Q
    ||||||||||||||| ||||||||| || |  ||||| ||||||||||||   ||  |||| ||||||||||||  ||||||||||||||||||| | ||    
T  15037956 ccatttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccc-tttggtgccaatttcggtgggctaa 15038054  T
Q  487 attcatacataacttgctatggcttagaacagagccctcgtaagtgggc 535  Q
     | |||||| | |||||| ||||||  ||| |||||| || ||||||||    
T  15038055 gtccatacagagcttgctttggctttaaacggagcccccgcaagtgggc 15038103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 19843466 - 19843350
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||| ||||||| || ||||||  ||||||||  ||| |||||||||||| ||    ||||||||||||||| ||||  | ||||||||||| ||| ||    
T  19843466 tgtcctcatgagcttaactcatttcgtaagggatgatgtacaatatgtgcaggggtcagggttcgaaccctagacacctcacttattcatctttaaggtg 19843367  T
Q  153 aatttttctagctacta 169  Q
    ||||| |||||||||||    
T  19843366 aatttctctagctacta 19843350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 511
Target Start/End: Complemental strand, 44946253 - 44946130
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 486  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    |  |||| ||||||||||||  ||||||||||||||||||| | ||    
T  44946253 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc-tttggtgccaatttcggtgggctaa 44946155  T
Q  487 attcatacataacttgctatggctt 511  Q
     | |||||| |||||||| ||||||    
T  44946154 gtccatacagaacttgctctggctt 44946130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 18424249 - 18424139
Alignment:
Q  56 ccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaat 155  Q
    |||||||||| ||||||||| |||||||   ||||||||||||||||| || | ||||||||||| |  | || || | ||||||||||| ||| |||||    
T  18424249 ccccatgagcttagctcatttggtaagg---aatgcacaatatgtgcaggggccggggttcgaactccggacatcccacttattcatctttaaggtgaat 18424153  T
Q  156 ttttctagctacta 169  Q
    || |||||| ||||    
T  18424152 ttctctagccacta 18424139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 33482743 - 33482636
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaa 154  Q
    ||||||||| | ||||||||| ||||||| |  ||||||||||| |||| || | | ||||||||||  || ||||| | ||||||||||| ||||||||    
T  33482743 tccccatgaacttagctcatttggtaaggaatgatgcacaatatatgcagggaccgtggttcgaacctcagacaccccacttattcatctttaagatgaa 33482644  T
Q  155 tttttcta 162  Q
    ||| ||||    
T  33482643 tttctcta 33482636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 34107488 - 34107602
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    ||||| |||||| ||||||||| ||||||||| ||||||||||||||||| ||    |||||| |||||  | ||||| | ||||||||||| ||| |||    
T  34107488 gtccctatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcagggttcaaaccc-ggacaccccacttattcatctttaaggtga 34107586  T
Q  154 atttttctagctacta 169  Q
    |||| |||||| ||||    
T  34107587 atttctctagccacta 34107602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 25553247 - 25553122
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||  ||||| ||||||||| |||||||||||||||||  |  |||||||||||| | ||  || | | ||||||||||| |||||||    
T  25553247 gtccccatgagcttaattcatttggtaagggataatgcacaatatgtgcagagattggggttcgaactc-agatactccacttattcatctttaagatga 25553149  T
Q  154 atttttctagctactaaactacctgac 180  Q
    |||| |||| | |||||| ||| ||||    
T  25553148 atttctctaaccactaaattacttgac 25553122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 32845088 - 32845181
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| |||| ||| |||||  ||||| ||||||||||||   ||| | || |||||||||||| | ||||||||||||||||||    
T  32845088 ccatttggggttggcctagtagttagcttgggatcttggagtttgctcctccaaaagtttcaggttcgattccctc-tggtgccaatttcggtgg 32845181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 16403522 - 16403567
Alignment:
Q  58 ccatgagcatagctcattcggtaagggacaatgcacaatatgtgca 103  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||    
T  16403522 ccatgagcttagctcatttggtaagggataatgcacaatatgtgca 16403567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 482
Target Start/End: Original strand, 17324764 - 17324856
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||| |||||||||| |||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  17324764 catttggggttggcctagtggttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 17324856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 18976625 - 18976576
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  18976625 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 18976576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 27269550 - 27269501
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  27269550 ccatttggggttggcatagtggttggcttgggatcttcgagtttgctcct 27269501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 3330305 - 3330195
Alignment:
Q  52 ctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca-tggtctggggttcgaaccctaggcaccctatttattcatcttaaaga 150  Q
    ||||||||||| || || ||||||  |||||||| |||||||||||||||||  |||| || ||||||||||  | ||||| | ||||||||||| |||     
T  3330305 ctgtccccatgtgcttaactcatttagtaagggataatgcacaatatgtgcagaggtc-ggagttcgaaccccggacaccccacttattcatctttaagg 3330207  T
Q  151 tgaatttttcta 162  Q
    ||||||| ||||    
T  3330206 tgaatttctcta 3330195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 40203381 - 40203334
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtg 101  Q
    |||| ||||||| ||||||||||||||||||| |||| ||||||||||    
T  40203381 gtcctcatgagcttagctcattcggtaagggataatgtacaatatgtg 40203334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 478
Target Start/End: Complemental strand, 33827773 - 33827684
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcg 478  Q
    ||||||||||||||| ||||||||||||||  ||||| ||| ||||||||    |  |||| |||||||||||| | ||||||||||||||    
T  33827773 ccatttggggttggcctagtggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcg 33827684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 6714481 - 6714432
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||| ||||| || |||||||||||| ||||| ||||||||||||    
T  6714481 ccatttgggattggcctaatggttggcttgagatcttggagtttgctcct 6714432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 11941410 - 11941361
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    
T  11941410 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcct 11941361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 32084841 - 32084906
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    ||||||||| ||||||||| |||||||||||||||| | ||| || | || | |||||||||||||    
T  32084841 cccatgagcttagctcatttggtaagggacaatgcatattatatgtaggggccggggttcgaaccc 32084906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 461
Target Start/End: Complemental strand, 32526285 - 32526212
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattccc 461  Q
    |||||||| ||||||||||||||||  |||  |||||  ||||||||||| ||||  |||| ||||||||||||    
T  32526285 ccatttggagttggcttagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgattccc 32526212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 33065353 - 33065244
Alignment:
Q  60 atgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaattttt 159  Q
    |||||| ||||||||| || |||||| |||||||||| |||| | ||   ||||||||||| |    ||||||| ||||||||||| ||| ||||||| |    
T  33065353 atgagcttagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggttcgaactccgaacaccctacttattcatctttaaggtgaatttct 33065254  T
Q  160 ctagctacta 169  Q
    ||||| ||||    
T  33065253 ctagccacta 33065244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 482
Target Start/End: Complemental strand, 44976353 - 44976261
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||| ||||||||||||||  ||||| | ||||||||||    |  |||| |||||||||||| | |||||||||||| |||||    
T  44976353 catttggggttggcctagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctc-tggtgccaattttggtgg 44976261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 4852556 - 4852604
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    |||||||||||| | ||||||||| |||| |||||| ||||||||||||    
T  4852556 catttggggttgacctagtggttgacttggaatcttggagtttgctcct 4852604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 424
Target Start/End: Complemental strand, 8379469 - 8379433
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatctt 424  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  8379469 ccatttgaggttgacttagtggttggcttgaaatctt 8379433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 169
Target Start/End: Original strand, 41749939 - 41750054
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    |||||||||||||  |||||||| || |||||| |||||||||| |||| | ||   |||||| ||||||  | ||||| | ||||||||||| ||| ||    
T  41749939 tgtccccatgagctaagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggtttgaaccccggacaccc-acttattcatctttaaggtg 41750037  T
Q  153 aatttttctagctacta 169  Q
    ||||| |||||| ||||    
T  41750038 aatttctctagccacta 41750054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 4e-18; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 40407062 - 40406947
Alignment:
Q  55 tccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca-tggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||||||  || | |||||||||||||  | ||||| | ||||||||||| ||| |||    
T  40407062 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccgggggttcgaaccccggacaccccacttattcatctttaaggtga 40406963  T
Q  154 atttttctagctacta 169  Q
    |||| |||||| ||||    
T  40406962 atttctctagccacta 40406947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 27862934 - 27862840
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaa 147  Q
    ||||||||||||| ||||||||| | ||||||| |||||||||| |||||| || |||||||||||||||  | ||||| | |||||||||||||    
T  27862934 tgtccccatgagcttagctcatttgataagggataatgcacaatttgtgcaggggctggggttcgaaccccggacaccccacttattcatcttaa 27862840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 46283115 - 46283241
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| || |||||| ||||||||| |||||||||||||||||  | | |||||||||||||  | ||||| | ||||||||||| ||| |||    
T  46283115 gtccccatgagcttacctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggacaccccacttattcatctttaaggtga 46283214  T
Q  154 atttttctagctactaaactacctgac 180  Q
    |||| |||||  |||| ||||| ||||    
T  46283215 atttctctagtcactagactacttgac 46283241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 16556447 - 16556559
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||||| ||   |||||||||||||    ||||| | ||||||||||| ||| ||||||    
T  16556447 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccccgaacaccccacttattcatctttaaggtgaatt 16556546  T
Q  157 tttctagctacta 169  Q
    | |||||| ||||    
T  16556547 tctctagccacta 16556559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 36993037 - 36993160
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    ||||||||| ||||||||| | ||||||| ||||||||||||||| | ||  ||||||| ||||||  | ||||| | ||||||||||| ||| ||||||    
T  36993037 cccatgagcttagctcatttgataagggataatgcacaatatgtgaaggggttggggtttgaaccccggacaccccaattattcatctttaaggtgaatt 36993136  T
Q  157 tttctagctactaaactacctgac 180  Q
    | |||||| ||||  |||||||||    
T  36993137 tctctagccactaggctacctgac 36993160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 50815700 - 50815815
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatga 153  Q
    |||||||||||| ||||||||| | ||| ||| |||||||||| |||||| || | |||||||||||||  | ||||| |  |||||||||||||| |||    
T  50815700 gtccccatgagcttagctcatttgataaaggataatgcacaatttgtgcaggggccggggttcgaaccccggacaccccacatattcatcttaaaggtga 50815799  T
Q  154 atttttctagctacta 169  Q
    |||| |||||| ||||    
T  50815800 atttctctagccacta 50815815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 25852211 - 25852304
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  25852211 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 25852304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 480
Target Start/End: Complemental strand, 13873495 - 13873404
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggt 480  Q
    ||||||||||||||| |||||||| |||||  ||||| |||||||||||||  ||  |||| |||||||||||| | ||||||||||||||||    
T  13873495 ccatttggggttggcctagtggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctc-tggtgccaatttcggt 13873404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 41621796 - 41621690
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 487  Q
    ||||||||||||||| || |||||||||||| ||||| |||||||||||| ||||  ||||  ||| |||| || | |||||||||||| ||||| ||||    
T  41621796 ccatttggggttggcctaatggttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctc-tggtgccaattttggtgggcaaa 41621698  T
Q  488 ttcataca 495  Q
    | ||||||    
T  41621697 tccataca 41621690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 27528995 - 27528902
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||| |||||||||||||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  27528995 ccatctggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 27528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 40059052 - 40058959
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| |||||||||||| |  |  |||| |||||||||| | | ||||||||||||||||||    
T  40059052 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctc-tggtgccaatttcggtgg 40058959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 46714389 - 46714483
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| ||||||||| ||  |||||||||||||||||||    
T  46714389 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcggtgg 46714483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 51974739 - 51974789
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca 103  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  51974739 tgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgca 51974789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 52983616 - 52983709
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||| ||||    
T  52983616 ccatttggggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcagtgg 52983709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 54127542 - 54127449
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| ||||| |||||| ||| ||||||||||||||||    
T  54127542 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctctt-gtgccaatttcggtgg 54127449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 535
Target Start/End: Original strand, 20566344 - 20566494
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaa--ttctctggttcgattcccacttggtgccaatttcggtgga 483  Q
    ||||||||||||||||| ||||||||||||||  ||||| ||||||||||| | || |  |  || |||||||||||| | ||||||||||||||||||     
T  20566344 atccatttggggttggcctagtggttggcttgggatcttggagtttgctcc-tccagaggtgatcaggttcgattccctc-tggtgccaatttcggtggg 20566441  T
Q  484 caaa-ttcatacataacttgctatggcttagaacagagccctcgtaagtgggc 535  Q
    |||| | |||||| | |||||| ||||||  ||| |||||| || ||||||||    
T  20566442 caaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggc 20566494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 482
Target Start/End: Original strand, 34835527 - 34835619
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||  ||||||||||||||  |||||||||||||||||| | ||  ||||  ||||||||||| | ||||| ||||||||||||    
T  34835527 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctc-tggtgtcaatttcggtgg 34835619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 2832174 - 2832058
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatg 152  Q
    ||||||||||||| ||||||||  ||||||||   |||||||||||||||| ||   ||||||||||||| |  ||||| | ||||||||||| ||| ||    
T  2832174 tgtccccatgagcttagctcatctggtaaggggtgatgcacaatatgtgcaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtg 2832075  T
Q  153 aatttttctagctacta 169  Q
    ||||  |||||| ||||    
T  2832074 aattcctctagccacta 2832058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 13210266 - 13210198
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    ||||| |||||| ||||||||| ||| ||||| ||||||||||||||||| || | |||||||||||||    
T  13210266 gtccctatgagcttagctcatttggtcagggataatgcacaatatgtgcaggggccggggttcgaaccc 13210198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 23448966 - 23449034
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||| | ||||| ||| ||||||||| ||||||||||||||||| ||  ||||||||||||||    
T  23448966 gtccccatgaacttagcttatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccc 23449034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 461
Target Start/End: Original strand, 42245744 - 42245816
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattccc 461  Q
    |||||||||||||| ||||||||| ||||  |||||||||||||||||| | ||  |||| ||||||||||||    
T  42245744 catttggggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccc 42245816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 34722169 - 34722216
Alignment:
Q  390 atttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  34722169 atttggggttggcttagtggttggcttgggatcttggagtttgctcct 34722216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 32986194 - 32986287
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| ||||| |||||| | ||||||||||||||||||    
T  32986194 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctc-tggtgccaatttcggtgg 32986287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 34844958 - 34844865
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| |||||||| |||||| ||||| ||||||||||||    |  |||| |||||||||| | | ||||||||||||||||||    
T  34844958 ccatttggggttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattctctc-tggtgccaatttcggtgg 34844865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 29430495 - 29430611
Alignment:
Q  59 catgagcatagctcattcggtaagggacaatgcacaatatgtgca-tggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaattt 157  Q
    ||||||| ||||| | | |||||||||||||||| | ||| |||| || || |||||||||||||  | ||||||| ||||||||||| ||| |||||||    
T  29430495 catgagcttagcttacttggtaagggacaatgcatattatatgcagtgatc-ggggttcgaaccccggacaccctacttattcatctttaaggtgaattt 29430593  T
Q  158 ttctagctactaaactac 175  Q
     |||||| | ||||||||    
T  29430594 atctagccaataaactac 29430611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 8716493 - 8716375
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca-tggtctggggttcgaaccctaggcaccctatttattcatctt--aaag 149  Q
    ||||||||||| | ||||||||| | ||||||| |||||||||||||||||   |||   |||||||||||| | ||||| | ||||| |||||  ||||    
T  8716493 tgtccccatgaacttagctcatttgataagggataatgcacaatatgtgcagaagtc-aaggttcgaaccctcgacaccccacttatttatctttaaaag 8716395  T
Q  150 atgaatttttctagctacta 169  Q
    |||||||| |||||||||||    
T  8716394 atgaatttctctagctacta 8716375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 43362267 - 43362167
Alignment:
Q  57 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    ||||||||| ||||||||| | ||||||| |||||||||||| | || ||   |||||||||||||  | ||||| | ||||||||||| ||| ||||||    
T  43362267 cccatgagcttagctcatttgctaagggataatgcacaatatattcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggtgaatt 43362168  T
Q  157 t 157  Q
    |    
T  43362167 t 43362167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 435
Target Start/End: Complemental strand, 5609402 - 5609355
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctc 435  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  5609402 ccatttggggttggcctagtggttggcttgggatcttggagtttgctc 5609355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 25234946 - 25234839
Alignment:
Q  68 agctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagctac 167  Q
    |||||||| | ||||||| ||||||||||| ||| | ||  || ||||||||||| || ||||| | ||||||||||| ||| ||||||| |||| | ||    
T  25234946 agctcatttgataagggataatgcacaataagtgtaggggttgaggttcgaaccccagacaccccagttattcatctttaaggtgaatttctctaaccac 25234847  T
Q  168 taaactac 175  Q
    || |||||    
T  25234846 tagactac 25234839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 35909127 - 35909024
Alignment:
Q  58 ccatgagcatagctcattcggtaagggacaatgcacaatatgtgca-tggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatt 156  Q
    |||||||| |||||||||  |||||||| |||||||||||| ||||  |||| | |||||||| || || ||||| | ||||| ||||| ||| ||||||    
T  35909127 ccatgagcttagctcattttgtaagggataatgcacaatatatgcaggggtcggaggttcgaatcccagacaccccacttatttatctttaaggtgaatt 35909028  T
Q  157 tttc 160  Q
    ||||    
T  35909027 tttc 35909024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 49635423 - 49635474
Alignment:
Q  52 ctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca 103  Q
    |||||||||||||  ||||||||| ||||||||| |||||||||||| ||||    
T  49635423 ctgtccccatgagtttagctcatttggtaagggataatgcacaatatatgca 49635474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 25104319 - 25104369
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca 103  Q
    ||||||| ||||| ||||||||||||| | ||| |||||||||||||||||    
T  25104319 tgtccccttgagcttagctcattcggtgaaggataatgcacaatatgtgca 25104369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 33696479 - 33696386
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||| |||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| ||||| |||||| | ||||||||||||||||||    
T  33696479 ccatttagggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctc-tggtgccaatttcggtgg 33696386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 46676571 - 46676502
Alignment:
Q  48 acatctgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcga 118  Q
    |||| ||||||||||||| ||||||| | ||||| |||||||||| ||||| |||| |||| |||||||||    
T  46676571 acatgtgtccccatgagcttagctcagttggtaa-ggacaatgcataatatatgcaaggtccggggttcga 46676502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 56497676 - 56497611
Alignment:
Q  53 tgtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaa 119  Q
    ||||||| ||||| ||||||| | ||||||| |||||||| ||||| |||| |||||||||||||||    
T  56497676 tgtccccgtgagcttagctcaattggtaagg-acaatgcataatatatgcaaggtctggggttcgaa 56497611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 1985833 - 1985882
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||| ||||| ||||||||||||||  ||||| ||||||||||||    
T  1985833 ccatttgggattggcctagtggttggcttgggatcttggagtttgctcct 1985882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 446
Target Start/End: Complemental strand, 3089511 - 3089454
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattc 446  Q
    ||||||||||||| ||| ||||||  |||||||||| |||| ||||||| ||||||||    
T  3089511 catttggggttggtttaatggttgatttgaaatcttggagtgtgctcctctcaaattc 3089454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 19660732 - 19660683
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    |||||||| |||||| ||||||||||||||  ||||| ||||||||||||    
T  19660732 ccatttggagttggcctagtggttggcttgggatcttggagtttgctcct 19660683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 41971401 - 41971352
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgca 103  Q
    |||||||||||| ||||||||| |||||| || |||||||||| ||||||    
T  41971401 gtccccatgagcttagctcatttggtaagtgataatgcacaatttgtgca 41971352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 478
Target Start/End: Complemental strand, 13584456 - 13584365
Alignment:
Q  386 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcg 478  Q
    ||||||||| ||||||| ||||||||||| ||| || || ||||||||||||   ||| ||||  ||||||||||| | ||||| ||||||||    
T  13584456 atccatttgaggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccctc-tggtgtcaatttcg 13584365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 14542799 - 14542759
Alignment:
Q  83 ggacaatgcacaatatgtgcatggtctggggttcgaaccct 123  Q
    |||||||||| ||||| |||| |||||||||||||||||||    
T  14542799 ggacaatgcataatatatgcaaggtctggggttcgaaccct 14542759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 43719264 - 43719216
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    |||||||||||||  |||||||||| |||| ||||| ||||||||||||    
T  43719264 catttggggttggtctagtggttggtttgagatcttggagtttgctcct 43719216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 45787902 - 45787855
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    |||||||||||||| |||||||||||||| |||||| || |||||||||    
T  45787902 catttggggttggcctagtggttggcttggaatcttgga-tttgctcct 45787855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 5282 - 5189
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  5282 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 5189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 121901 - 121833
Alignment:
Q  54 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcatggtctggggttcgaaccc 122  Q
    |||||||||||| ||||||||| |||| |||| ||||||||||||||||| || | |||||||||||||    
T  121901 gtccccatgagcttagctcatttggtaggggataatgcacaatatgtgcagggaccggggttcgaaccc 121833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 40322 - 40415
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| |||||||||||||   ||||| |||||||||||||   |  |||| |||||||||||| | ||||||||||||||||||    
T  40322 ccatttggggttggcctagtggttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 40415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 97566 - 97473
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    ||||||||||||||| ||||||||||||||  |||||  |||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  97566 ccatttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 97473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 482
Target Start/End: Complemental strand, 1255 - 1163
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||| ||||||||||||||    
T  1255 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggagccaatttcggtgg 1163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 482
Target Start/End: Complemental strand, 9498 - 9406
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 482  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||| ||||||||||||||    
T  9498 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggagccaatttcggtgg 9406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 12199 - 12151
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  12199 catttggggttggcctagtggttggcttgggatcttggagtttgctcct 12151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 8607 - 8558
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  8607 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 8558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 10892 - 10844
Alignment:
Q  389 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  10892 catttggggttggcctagtggttggcttgggatcttggagtttgctcct 10844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 483
Target Start/End: Complemental strand, 8379 - 8285
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgga 483  Q
    |||||||||||||| ||||||||||||| |  ||||| ||||||||||||    |  ||||  ||||||||||| | |||||||||||||||||||    
T  8379 ccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctc-tggtgccaatttcggtgga 8285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 146793 - 146875
Alignment:
Q  81 agggacaatgcacaatatgtgcatggtctggggttcgaaccctaggcaccctatttattcatcttaaagatgaatttttctagc 164  Q
    ||||||||||||||||||||||| ||  ||| ||| ||||||||| ||||| |  | |||||||||||| ||||||| ||||||    
T  146793 agggacaatgcacaatatgtgcagggattggagtttgaaccctagacaccc-acctgttcatcttaaaggtgaatttctctagc 146875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 14988 - 15037
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||||| ||  ||||| ||||||||||||    
T  14988 ccatttggggttggcctagtggttggcctgggatcttggagtttgctcct 15037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 41844 - 41795
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  41844 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcct 41795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 53071 - 53022
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 437  Q
    ||||||||| ||||| ||||||||||||||  ||||| ||||||||||||    
T  53071 ccatttgggattggcctagtggttggcttgggatcttggagtttgctcct 53022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 461
Target Start/End: Original strand, 27773 - 27846
Alignment:
Q  388 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattccc 461  Q
    ||||||||||||||  |||||||||| |||  || || |||||||||||| ||||  |||| ||||||||||||    
T  27773 ccatttggggttggtctagtggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattccc 27846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University