View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18693_low_6 (Length: 489)

Name: NF18693_low_6
Description: NF18693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18693_low_6
NF18693_low_6
[»] chr7 (9 HSPs)
chr7 (230-471)||(20103554-20103795)
chr7 (11-181)||(20103844-20104015)
chr7 (253-434)||(31577706-31577888)
chr7 (230-441)||(10206261-10206472)
chr7 (112-188)||(31577948-31578025)
chr7 (309-429)||(23610849-23610969)
chr7 (113-188)||(23611086-23611162)
chr7 (123-176)||(10206529-10206583)
chr7 (20-75)||(20073338-20073396)
[»] chr1 (3 HSPs)
chr1 (230-435)||(21662722-21662927)
chr1 (309-453)||(9833019-9833165)
chr1 (83-188)||(21662966-21663072)
[»] chr6 (2 HSPs)
chr6 (230-453)||(12883096-12883318)
chr6 (75-188)||(12882945-12883060)
[»] chr3 (5 HSPs)
chr3 (333-453)||(16068324-16068444)
chr3 (80-188)||(48105259-48105368)
chr3 (230-371)||(48105079-48105218)
chr3 (74-156)||(16068625-16068705)
chr3 (74-111)||(30694340-30694377)
[»] chr4 (3 HSPs)
chr4 (359-455)||(21218236-21218333)
chr4 (230-363)||(21217711-21217844)
chr4 (371-423)||(8924349-8924401)
[»] chr2 (2 HSPs)
chr2 (339-439)||(37487331-37487431)
chr2 (367-435)||(15928799-15928867)
[»] scaffold0421 (1 HSPs)
scaffold0421 (367-427)||(6718-6778)


Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 230 - 471
Target Start/End: Complemental strand, 20103795 - 20103554
Alignment:
Q  230 ttcacagaatttcgagagtaggcaaaagaatctaaaatcatggcgaatcttcaaatcactttaaattaggtatttcaaaataagtcattcaactcatgca 329  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  20103795 ttcacagaatttcgagagtaggcaaaagaatttaaaatcatggcgaatcttcaaatcacttcaaattcggtatttcaaaataagtcattcaactcatgca 20103696  T
Q  330 acaaaagttctaacaatgattaatacactaaaatgactatttaatttcaattcatcacaataattgtttgaacaaatatttaagaaccaaaaatgatacg 429  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20103695 acaaaagttctaacaatgattaatacaccaaaatgactatttaatttcaattcatcacaataattgtttgaacaaatatttaagaaccaaaaatgatacg 20103596  T
Q  430 cgtaactgaaggaaaataaaatgatatgtttctttattacat 471  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  20103595 cgtaattgaaggaaaataaaatgatatgtttctttattacat 20103554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 20104015 - 20103844
Alignment:
Q  11 atgaaacaggataagttttaatgtgattgatactatatttttataattaatgtgaaatttggacaacttgactctaacccgtgcgatgcacgcgttttgt 110  Q
    |||||||| ||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  20104015 atgaaacaagataagtttaaatgtgattgatactgcatttttataattaatgtgaaatttggacaactagactctaatccgtgcgatgcacgcgttttgt 20103916  T
Q  111 attaatttatatgcatttgaaattcagtaacatgtttaactatgatcact-ttattgtgaacaatttgatat 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20103915 attaatttatatgcatttgaaattcagtaacatgtttaactatgatcactattattgtgaacaatttgatat 20103844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 253 - 434
Target Start/End: Complemental strand, 31577888 - 31577706
Alignment:
Q  253 aaaagaatctaaaat-catggcgaatcttcaaatcactttaaattaggtatttcaaaataagtcattcaactcatgcaacaaaagttctaacaatgatta 351  Q
    |||||||| |||||| |||  ||||| |||| ||||||| |||||| ||||||||| |||||||||||||| | | |||| | |||||||||||  ||||    
T  31577888 aaaagaatataaaatgcattacgaatgttcagatcacttcaaattatgtatttcaatataagtcattcaacccgtccaaccacagttctaacaacaatta 31577789  T
Q  352 atacactaaaatgactatttaatttcaattcatcacaataattgtttgaacaaatatttaagaaccaaaaatgatacgcgtaa 434  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  31577788 atacaccaaaataactatttaatttcaattcatcaaaataattgtttgaacaaatatttaagaaccaaaaacgatacgcgtaa 31577706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 230 - 441
Target Start/End: Complemental strand, 10206472 - 10206261
Alignment:
Q  230 ttcacagaatttcgagagtaggcaaaagaatctaaaatc-atggcgaatcttcaaatcactttaaattaggtatttcaaaataagtcattcaactcatgc 328  Q
    |||| ||||||| ||||||||| |||||||||||||| | | | |||||||||| || |||| |||||  ||||||||| |||||||||||||  | | |    
T  10206472 ttcatagaatttagagagtagg-aaaagaatctaaaaaccacgacgaatcttcagattacttcaaattttgtatttcaatataagtcattcaatccgtac 10206374  T
Q  329 aacaaaagttctaacaatgattaatacactaaaatgactatttaatttcaattcatcacaataattgtttgaacaaatatttaagaaccaaaaatgatac 428  Q
    ||  |||||||||||||  |||||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  10206373 aatcaaagttctaacaacaattaatacaccaaaataactatttaattacaattcatcaaaataattgtttgaacaaatatttaagaacaaaaaacgatac 10206274  T
Q  429 gcgtaactgaagg 441  Q
    |||| ||||||||    
T  10206273 gcgttactgaagg 10206261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 31578025 - 31577948
Alignment:
Q  112 ttaatttatatgcatttgaaattcagtaacatgtttaactatgatcact-ttattgtgaacaatttgatatgcataga 188  Q
    |||||| | ||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||| |||||||||||    
T  31578025 ttaattcacatgcatttgaaattcagtaacatatttaactattatcactattattgtgaacaattttatatgcataga 31577948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 429
Target Start/End: Complemental strand, 23610969 - 23610849
Alignment:
Q  309 ataagtcattcaactcatgcaacaaaagttctaacaatgattaatacactaaaatgactatttaatttcaattcatcacaataattgtttgaacaaatat 408  Q
    |||| |||||||||   |||||| ||| |||||||||  ||||||||||| |||| ||| ||||||||||||| |||| |||||||||||||   |||||    
T  23610969 ataaatcattcaacctgtgcaaccaaaattctaacaacaattaatacactgaaataactctttaatttcaatttatcaaaataattgtttgacataatat 23610870  T
Q  409 ttaagaaccaaaaatgatacg 429  Q
    |||||||| ||||| ||||||    
T  23610869 ttaagaacaaaaaacgatacg 23610849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 23611162 - 23611086
Alignment:
Q  113 taatttatatgcatttgaaattcagtaacatgtttaactatgatcact-ttattgtgaacaatttgatatgcataga 188  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||| | |||||||||||||  | |||||||||    
T  23611162 taattcatatgcatttgaaattcagtaacataattaactatgatcactatcattgtgaacaattctacatgcataga 23611086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 10206583 - 10206529
Alignment:
Q  123 gcatttgaaattcagtaacatgtttaactatgatcact-ttattgtgaacaattt 176  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  10206583 gcatttgaaattcagtaacatatttaactatcatcactattattgtgaacaattt 10206529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 20073396 - 20073338
Alignment:
Q  20 gataagttttaatgtgattgat---actatatttttataattaatgtgaaatttggaca 75  Q
    ||||||||| ||||||||||||   || | |||||||| ||||||||||||||||||||    
T  20073396 gataagtttaaatgtgattgatgatacaacatttttatgattaatgtgaaatttggaca 20073338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 230 - 435
Target Start/End: Complemental strand, 21662927 - 21662722
Alignment:
Q  230 ttcacagaatttcgagagtaggcaaaagaatctaaaa-tcatggcgaatcttcaaatcactttaaattaggtatttcaaaataagtcattcaactcatgc 328  Q
    |||||||||||| ||||||||| |||| ||||||||| |||||  ||||||||| ||||||| |||||| ||||||||| |||| ||||||||| | |||    
T  21662927 ttcacagaatttagagagtaggaaaaa-aatctaaaaatcatgatgaatcttcagatcacttcaaattatgtatttcaatataattcattcaacccgtgc 21662829  T
Q  329 aacaaaagttctaacaatgattaatacactaaaatgactatttaatttcaattcatcacaataattgtttgaacaaatatttaagaaccaaaaatgatac 428  Q
    ||| |||||||||||||  |||||||||| |||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21662828 aaccaaagttctaacaacaattaatacaccaaaatatctatttaatttcaattcatcaaaataattgtttgaacaaatatttaagaaccaaaaatgatac 21662729  T
Q  429 gcgtaac 435  Q
    |||||||    
T  21662728 gcgtaac 21662722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 309 - 453
Target Start/End: Original strand, 9833019 - 9833165
Alignment:
Q  309 ataagtcattcaactcatgcaacaaaagttctaacaatgattaatacactaaaatgactatttaatttcaattcatcacaataattgtttgaac--aaat 406  Q
    |||||| ||||||||| |||||  |||||||||||||  |||||||||| ||||| |||||||||||| |||| |||| |||||||||||||||  ||||    
T  9833019 ataagttattcaactcgtgcaatcaaagttctaacaacaattaatacaccaaaataactatttaattttaattaatcaaaataattgtttgaacaaaaat 9833118  T
Q  407 atttaagaaccaaaaatgatacgcgtaactgaaggaaaataaaatga 453  Q
    ||||||||||||||||  ||||||||| || |||| ||| |||||||    
T  9833119 atttaagaaccaaaaacaatacgcgtagcttaagggaaagaaaatga 9833165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 21663072 - 21662966
Alignment:
Q  83 tctaacccgtgcgatgcacgcgttttgtattaatttatatgcatttgaaattcagtaacatgtttaactatgatcact-ttattgtgaacaatttgatat 181  Q
    ||||| |||| ||||| ||| ||||| | |||||| ||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||| | ||    
T  21663072 tctaatccgtacgatgtacgagttttttgttaattcatatgcatttgaaattcagtaacatatttaacaatggtcactattattgtgaacaattttacat 21662973  T
Q  182 gcataga 188  Q
    |||||||    
T  21662972 gcataga 21662966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 230 - 453
Target Start/End: Original strand, 12883096 - 12883318
Alignment:
Q  230 ttcacagaatttcgagagtaggcaaaagaatctaaaa-tcatggcgaatcttcaaatcactttaaattaggtatttcaaaataagtcattcaactcatgc 328  Q
    |||||| |||||  |||||||| |||||||||||||| ||||||||| ||| || ||||||| |||||| ||||||||| ||||||||||||||| ||||    
T  12883096 ttcacaaaatttaaagagtagg-aaaagaatctaaaaatcatggcgattctgcagatcacttcaaattatgtatttcaatataagtcattcaacttatgc 12883194  T
Q  329 aacaaaagttctaacaatgattaatacactaaaatgactatttaatttcaattcatcacaataattgtttgaacaaatatttaagaaccaaaaatgatac 428  Q
    ||| |||||||||||||  ||| ||| ||  |||| |||||||||||||||||| ||| ||||| | ||||||||||||||||||||||||||| ||||     
T  12883195 aaccaaagttctaacaacaattgatataccgaaataactatttaatttcaattcgtcaaaataa-tatttgaacaaatatttaagaaccaaaaacgataa 12883293  T
Q  429 gcgtaactgaaggaaaataaaatga 453  Q
    |||||| |||||| ||| |||||||    
T  12883294 gcgtaagtgaagggaaagaaaatga 12883318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 12882945 - 12883060
Alignment:
Q  75 aacttgactctaacccgtgcgatgcacgcgttttgtattaatttatatgcatttgaaattcagtaacatgtttaactatgatcact-ttat-tgtgaaca 172  Q
    |||| ||||||||||||| |||| |||  ||||| | |||||| |||||||| ||||||| |||||||| ||||||||||||||||  ||| ||||||||    
T  12882945 aactagactctaacccgtccgatacacatgttttttgttaattcatatgcatatgaaatttagtaacatatttaactatgatcactactatctgtgaaca 12883044  T
Q  173 atttgatatgcataga 188  Q
    |||| | |||||||||    
T  12883045 attttacatgcataga 12883060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 333 - 453
Target Start/End: Complemental strand, 16068444 - 16068324
Alignment:
Q  333 aaagttctaacaatgattaatacactaaaatgactatttaatttcaattcatcacaataattgtttgaacaaatatttaagaaccaaaaatgatacgcgt 432  Q
    |||||||||||||  |||||||||| |||||  ||||||||||| ||||||| | |||||||| |||||||||||| |||||||||||||||||||||||    
T  16068444 aaagttctaacaacaattaatacaccaaaatatctatttaatttaaattcattaaaataattgcttgaacaaatatataagaaccaaaaatgatacgcgt 16068345  T
Q  433 aactgaaggaaaataaaatga 453  Q
    ||||||||| ||| |||||||    
T  16068344 aactgaagggaaagaaaatga 16068324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 48105368 - 48105259
Alignment:
Q  80 gactctaacccgtgcgatgcacgcgttttgtattaatttatatgcatttgaaattcagtaacatgtttaactatgatcact-ttattgtgaacaatttga 178  Q
    |||||||||||||  |||||||| ||||| | |||||| ||||| ||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| |    
T  48105368 gactctaacccgtatgatgcacgagttttttgttaattcatatgtatttggaattcagtaacatatttaactatgatcactattattgtaaacaatttta 48105269  T
Q  179 tatgcataga 188  Q
     |||||||||    
T  48105268 catgcataga 48105259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 371
Target Start/End: Complemental strand, 48105218 - 48105079
Alignment:
Q  230 ttcacagaatttcgagagtaggcaaaagaatctaaaa-tcatggcgaatcttcaaatcactttaaattaggtatttcaaaataagtcattcaactcatgc 328  Q
    ||||||||||||  |||||||| |||||||||||||| ||| | |||||||| | ||||||| |||||| |||||| || |||||||||||||| | |||    
T  48105218 ttcacagaattt--agagtagg-aaaagaatctaaaaatcacgacgaatctttagatcacttcaaattatgtattttaatataagtcattcaacccgtgc 48105122  T
Q  329 aacaaaagttctaacaatgattaatacactaaaatgactattt 371  Q
    ||  |||||||||||||  |||||||||| ||||| |||||||    
T  48105121 aatcaaagttctaacaacaattaatacaccaaaataactattt 48105079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 16068705 - 16068625
Alignment:
Q  74 caacttgactctaacccgtgcgatgcacgcgttttgtattaatttatatgcatttgaaattcagtaacatgtttaactatgat 156  Q
    ||||| |||||||||  ||||||||||||  |||| | |||||| |||| |||||||||||||||||||  ||||||||||||    
T  16068705 caactagactctaacatgtgcgatgcacgatttttttgttaattcatattcatttgaaattcagtaaca--tttaactatgat 16068625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 30694340 - 30694377
Alignment:
Q  74 caacttgactctaacccgtgcgatgcacgcgttttgta 111  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  30694340 caactagactctaacccgtgcgatgcacgggttttgta 30694377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 359 - 455
Target Start/End: Original strand, 21218236 - 21218333
Alignment:
Q  359 aaaatgactatttaatttcaattcatcacaataattgtttgaac-aaatatttaagaaccaaaaatgatacgcgtaactgaaggaaaataaaatgata 455  Q
    ||||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||| ||||  || |||||||||    
T  21218236 aaaataactatttaatttcaattcatcaaaataatagtttgaacaaaatatttaagaaccaaaaacgatacgcgtaactaaagggtaagaaaatgata 21218333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 363
Target Start/End: Original strand, 21217711 - 21217844
Alignment:
Q  230 ttcacagaatttcgagagtaggcaaaagaatctaaaa-tcatggcgaatcttcaaatcactttaaattaggtatttcaaaataagtcattcaactcatgc 328  Q
    |||||| ||||| | ||||||| |||||| ||||||| ||||| ||||| |||||||||||| |||||  ||||||||  |||||||||||||||| |      
T  21217711 ttcacataatttagggagtagg-aaaagagtctaaaaatcatgacgaatgttcaaatcacttcaaattctgtatttcagtataagtcattcaactcgtcg 21217809  T
Q  329 aacaaaagttctaacaatgattaatacactaaaat 363  Q
    ||| |||||||||||||  |||||||||| |||||    
T  21217810 aaccaaagttctaacaacaattaatacaccaaaat 21217844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 423
Target Start/End: Complemental strand, 8924401 - 8924349
Alignment:
Q  371 taatttcaattcatcacaataattgtttgaacaaatatttaagaaccaaaaat 423  Q
    ||||||||||||||   ||| ||||||||||| ||||||||||||||||||||    
T  8924401 taatttcaattcatataaattattgtttgaaccaatatttaagaaccaaaaat 8924349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 439
Target Start/End: Original strand, 37487331 - 37487431
Alignment:
Q  339 ctaacaatgattaatacactaaaatgactatttaatttcaattcatcacaataattgtttgaacaaatatttaagaaccaaaaatgatacgcgtaactga 438  Q
    |||||||  ||||| |||| | ||| |||||||||||| ||||||||  ||||||||||||||| | | ||||||||||||||| | | |||||||||||    
T  37487331 ctaacaacaattaacacaccagaataactatttaattttaattcatcgaaataattgtttgaaccactgtttaagaaccaaaaacgttgcgcgtaactga 37487430  T
Q  439 a 439  Q
    |    
T  37487431 a 37487431  T

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Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 435
Target Start/End: Original strand, 15928799 - 15928867
Alignment:
Q  367 tatttaatttcaattcatcacaataattgtttgaacaaatatttaagaaccaaaaatgatacgcgtaac 435  Q
    ||||||||||||||||     |||||||| |||||| |||||||||||||||||||||||| |||||||    
T  15928799 tatttaatttcaattcgaagaaataattggttgaaccaatatttaagaaccaaaaatgataagcgtaac 15928867  T

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Target: scaffold0421 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 6778 - 6718
Alignment:
Q  367 tatttaatttcaattcatcacaataattgtttgaacaaatatttaagaaccaaaaatgata 427  Q
    |||||||||||||||||    |||||||| |||||| ||||||||||||||||||||||||    
T  6778 tatttaatttcaattcaaagaaataattggttgaaccaatatttaagaaccaaaaatgata 6718  T

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