View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18694_low_10 (Length: 382)
Name: NF18694_low_10
Description: NF18694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18694_low_10 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
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Alignment Details
Target: chr4 (Bit Score: 320; Significance: 1e-180; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 25568536 - 25568917
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
25568536 |
tgtttctttattgggttggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaacgtccttgttgagcgaagcc |
25568635 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgagaatgattat-------tattattataatgttaaataaaaattgagcct |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| || |
|
|
| T |
25568636 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgagaatgatgaaaaaattatattattatattgttaaataaaaattgagtct |
25568735 |
T |
|
| Q |
194 |
gttttcacaattacagattatgaataacgatggccattatggtgctttcctacgccatgataattatccaaattggttgaccttctacagtgaaggttct |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
25568736 |
gttttcacaattacagattatgaataacgatggccattatggtgctttcctacgccatgataattatccaaattggttgaccttgtacagtgaaggttct |
25568835 |
T |
|
| Q |
294 |
tcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgttgattcttggacctatgcta |
375 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25568836 |
tcagtaatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgttgattcttggacctatgcta |
25568917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 4135240 - 4135099
Alignment:
| Q |
3 |
tttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagcttt |
102 |
Q |
| |
|
||||||||||||||||| |||||| |||| || ||||||| |||||||||| |||| ||| ||||| ||||||| ||||||||||||||||||| || |
|
|
| T |
4135240 |
tttctttattgggatggaccgaaacgatgttatggatatattaaatggttgtggtctttttgctgaaatcggaataagtgtccttgttgagcgaagcctt |
4135141 |
T |
|
| Q |
103 |
gtgactattgatgaattggaacagacttggaatgcatgatttg |
145 |
Q |
| |
|
|| |||||||||| || |||| |||||||||||||||||| |
|
|
| T |
4135140 |
gtaactattgatg-ataaaaacaagcttggaatgcatgatttg |
4135099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 4322562 - 4322411
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| |||||| |||| || |||||||| ||||||| || | ||| |||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
4322562 |
tgtttctttattgggatggatcgaaatgatgtcattcatatattaaatggttctggatttttcgcagaaattggaataagtgtccttgttgagagaagcc |
4322463 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||| || |||||| || ||||| ||||| |||||||||||| ||||||| |
|
|
| T |
4322462 |
ttgtaacggttgatg-ataagaacaagcttggcatgcatgatttgctgcgaga |
4322411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4334094 - 4334197
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| ||||||| |||| || || ||||| ||||| |||| ||||| || ||||||||||||| ||||||||||||||||||| |
|
|
| T |
4334094 |
tgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagcc |
4334193 |
T |
|
| Q |
101 |
ttgt |
104 |
Q |
| |
|
|||| |
|
|
| T |
4334194 |
ttgt |
4334197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 6499791 - 6499643
Alignment:
| Q |
4 |
ttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagctttg |
103 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||| ||||| ||||| |||| | ||| ||| || |||||||| || |||||||| ||||||||| || |
|
|
| T |
6499791 |
ttctttattgggatggaccgaaatgatgtaatacaaatattaaatgggtgtggattttttgctgatattggaattaaagtccttgtagagcgaagccttt |
6499692 |
T |
|
| Q |
104 |
tgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
| | |||||| ||| |||||| ||| ||||||||||||||||| |||| |
|
|
| T |
6499691 |
taattattga-caataggaacaagcttagaatgcatgatttgttgagaga |
6499643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 4125900 - 4125749
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
|||||||| |||||||||| ||||||| |||| || | ||| || ||||| |||| ||||| || ||||||||||||| |||||||||||| |||||| |
|
|
| T |
4125900 |
tgtttcttaattgggatggaccgaaatgatgttattcttattttaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgaacgaagcc |
4125801 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||| || |||||| || ||||| ||||| |||||||||||| ||||||| |
|
|
| T |
4125800 |
ttgtaacagttgatg-ataagaacaagcttggcatgcatgatttgctgcgaga |
4125749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 6547350 - 6547199
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| | |||| ||| |||||| ||||| ||||| ||| | ||| ||| || |||||||| || |||||||| ||||||||| |
|
|
| T |
6547350 |
tgtttctttattgggatggacaaaaatgatgcaatacaaatattaaatgggtgtagattttttgctgatattggaattaaagtccttgtagagcgaagcc |
6547251 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||| ||| |||| ||| |||||| ||| ||||||||||||||||| |||| |
|
|
| T |
6547250 |
ttgtaactgttga-caataggaacaagcttagaatgcatgatttgttgagaga |
6547199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 6649575 - 6649720
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
|||||||||||||| |||| ||||||| ||| |||||| ||||| ||||| ||| | ||| ||| || |||||||| || |||||||| ||| ||||| |
|
|
| T |
6649575 |
tgtttctttattggaatggaccgaaatgatgcaatacaaatattaaatgggagtggattttttgctgatattggaattaaagtccttgtagagagaagcc |
6649674 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgtt |
147 |
Q |
| |
|
|||| ||| |||| ||| |||||| ||| |||||||||||||||| |
|
|
| T |
6649675 |
ttgtaactgttga-caataggaacaagcttagaatgcatgatttgtt |
6649720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 6674528 - 6674676
Alignment:
| Q |
4 |
ttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagctttg |
103 |
Q |
| |
|
|||||||||||||||| ||||||| ||| |||||| ||||| ||||| ||| || ||| ||| || |||||||| || |||||| | ||||||||| || |
|
|
| T |
6674528 |
ttctttattgggatggaccgaaatgatgcaatacaaatattaaatgggtgtcaattttttgctgatattggaattaaagtccttttagagcgaagccttc |
6674627 |
T |
|
| Q |
104 |
tgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
| ||| |||| ||| |||||| ||| ||||||||||||| ||| |||| |
|
|
| T |
6674628 |
taactgttga-caataggaacaagcttagaatgcatgatttattgagaga |
6674676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 6814294 - 6814438
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
|||||||||||||||| || ||||||| ||||||||| ||||| ||||| |||| | || ||| || |||||||| || ||||||||||||||| | |
|
|
| T |
6814294 |
tgtttctttattgggagggaccgaaatgatgtaatacgaatattaaatgggtgtggatattttgctgatattggaattaaagtccttgttgagcgagccc |
6814393 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgt |
146 |
Q |
| |
|
|||| ||| |||| ||| |||||| ||| ||||||||||||||| |
|
|
| T |
6814394 |
ttgtaactgttga-caataggaacaagcttagaatgcatgatttgt |
6814438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 4358952 - 4359095
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
|||||||||||||| |||| ||| ||| |||| || | |||||| |||| |||| | ||| ||||| ||||||||||| ||||||||||||| ||||| |
|
|
| T |
4358952 |
tgtttctttattggaatggaccggaatgatgttattcgtatattagatggctgtggattttttgcaggaattggaataagtgtccttgttgagagaagcc |
4359051 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttg |
145 |
Q |
| |
|
|||| || |||||| || ||||| ||||| |||||||||||| |
|
|
| T |
4359052 |
ttgtaacggttgatg-ataagaacaagcttggcatgcatgatttg |
4359095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 4343483 - 4343634
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| |||||| |||| || | |||| | ||||| |||| | ||| |||||||| || |||| ||||||||||||| ||||| |
|
|
| T |
4343483 |
tgtttctttattgggatggatcgaaatgatgttattcgtatactaaatggctgtggatttttcgcagaaatcggcataagtgtccttgttgagagaagcc |
4343582 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||| | |||||| || ||||| ||||| |||||||||||| ||||||| |
|
|
| T |
4343583 |
ttgtaatggttgatg-ataagaacaagcttggcatgcatgatttgctgcgaga |
4343634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 355
Target Start/End: Complemental strand, 4319604 - 4319534
Alignment:
| Q |
285 |
gaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgt |
355 |
Q |
| |
|
||||||||||| ||||||||||||| |||| ||||||||| ||| |||||| ||||| || |||||||| |
|
|
| T |
4319604 |
gaaggttcttctgtaatttttgaagtccctcaagtggaaggacgtagcttgaagacaataatgtgcattgt |
4319534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 6756985 - 6757061
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaat |
77 |
Q |
| |
|
|||||||||||||||| || | ||||| |||||||||| ||||| ||||| |||| | ||| ||| || |||||||| |
|
|
| T |
6756985 |
tgtttctttattgggaaggacagaaatgatgtaatacaaatattaaatgggtgtggattttttgctgatattggaat |
6757061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 89; Significance: 8e-43; HSPs: 27)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 5691571 - 5691420
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
|||||||||||||||||||| |||||| |||| |||||||||| |||||||||| |||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
5691571 |
tgtttctttattgggatggttcgaaatgatgttgtacatatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagcc |
5691472 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||||||| |||||| || ||||||| ||| |||||||||||||||||||||| |
|
|
| T |
5691471 |
ttgtgactgttgatg-ataggaacaggcttagaatgcatgatttgttgcgaga |
5691420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 5148419 - 5148268
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| ||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
5148419 |
tgtttctttattgggatggaccgaaatgatgtcatacatatattaaatggctgtgaactttatgcagaaattggaataaatgtcctactggagcgaagcc |
5148320 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||||||| |||||| || ||| | |||||||||||||||||||||||||| |
|
|
| T |
5148319 |
ttgtgactgttgatg-atatgaatcggcttggaatgcatgatttgttgcgaga |
5148268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 5395585 - 5395728
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||| ||||||||||||| | | ||| |||| ||||||||||| |||||| | ||||||| ||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
5395585 |
tgtttttttattgggatggacaggaatgatgttatacatatattaaatggtagcgaactttttgcagaaattggagtaagtgtccttgttgagcgaagcc |
5395684 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttg |
145 |
Q |
| |
|
|||| ||| |||||| || |||||||||||| ||||||||||||| |
|
|
| T |
5395685 |
ttgtaactgttgatg-ataggaacagacttgcaatgcatgatttg |
5395728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 5094583 - 5094734
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| ||||||| | || | || |||||| ||||| |||| ||||| ||| ||||||||||||| | ||||||||||||| || |
|
|
| T |
5094583 |
tgtttctttattgggatggaccgaaatgacgttacacttatattaaatggatgtggactttttgctgaaattggaataagtatccttgttgagcgtagtc |
5094682 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||| ||| |||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
5094683 |
ttgtaactgttgatg-ataagaacaaacttggaatgcatgatttgttgcgaga |
5094734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 5104332 - 5104181
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| ||||||| | || | || |||||| |||| |||| ||||| ||||||||||||||||| | |||||||||||||||| |
|
|
| T |
5104332 |
tgtttctttattgggatggaccgaaatgacgttacacttatattagatggatgtggactttttgcagaaattggaataagtatccttgttgagcgaagtc |
5104233 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|| | ||| |||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
5104232 |
ttataactgttgatg-ataagaacaaacttggaatgcatgatttgttgcgaga |
5104181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 5369002 - 5369153
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
|||||||||||||||| || ||||||| |||| | || |||||| |||| |||| ||||| ||| ||||||||||||| | |||||||||||||||| |
|
|
| T |
5369002 |
tgtttctttattgggaaggaccgaaatgatgttacacttatattagatggatgtggactttttgctgaaattggaataagtatccttgttgagcgaagtc |
5369101 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||| ||| |||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
5369102 |
ttgtcactgttgatg-ataagaacaaacttggaatgcatgatttgttgcgaga |
5369153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5342236 - 5342339
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| ||||||| |||| ||||| ||||| ||||| |||| ||||| ||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
5342236 |
tgtttctttattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagcc |
5342335 |
T |
|
| Q |
101 |
ttgt |
104 |
Q |
| |
|
|||| |
|
|
| T |
5342336 |
ttgt |
5342339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 5075191 - 5075043
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| |||||| |||| | || |||||| ||||| |||||||||| ||| ||||||||| ||| ||| ||||||||||||||| |
|
|
| T |
5075191 |
tgtttctttattgggatggatcgaaatgatgttacacttatattaaatggatgtgaactttttgctgaaattggagtaagtgtacttgttgagcgaagcc |
5075092 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcg |
150 |
Q |
| |
|
|||| ||| | |||| || |||||| |||||||||||||||||| |||| |
|
|
| T |
5075091 |
ttgtaactgtcgatg-ataggaacaagcttggaatgcatgatttgctgcg |
5075043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 5348917 - 5349070
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| ||||||| |||| | || |||||| ||||| |||||||||| ||| ||||||||||||| | || ||||||| ||||| |
|
|
| T |
5348917 |
tgtttctttattgggatggaccgaaatgatgttacacttatattaaatggatgtgaactttttgctgaaattggaataagtatctttgttgatcgaagtc |
5349016 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgc--atgatttgttgcgaga |
153 |
Q |
| |
|
|||| ||| |||||| || ||||| ||||||||||| |||||||||||||||| |
|
|
| T |
5349017 |
ttgtcactgttgatg-ataagaacaaacttggaatgcatatgatttgttgcgaga |
5349070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5277235 - 5277383
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| | ||||| |||| ||||||||||| ||||| |||| | ||| ||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
5277235 |
tgtttctttattgggatggacagaaatgatgttatacatatattaaatggctgtggattttttgcagaagatggaataagtgtccttgttgagcgaagct |
5277334 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcg |
150 |
Q |
| |
|
| || || ||||| ||| |||| |||||||||||| |||||||||| |
|
|
| T |
5277335 |
tagtaacggttgat-aataaaaacaagcttggaatgcataatttgttgcg |
5277383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 5068534 - 5068383
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| ||||||| |||| | || |||||| ||||| || | ||||| ||| ||||||||||||| | |||||||||||||||| |
|
|
| T |
5068534 |
tgtttctttattgggatggaccgaaatgatgttacacttatattaaatggatgcggactttttgctgaaattggaataagtatccttgttgagcgaagtc |
5068435 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
| || | | ||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
5068434 |
tggttattgttgat-aaaaagaacaaacttggaatgcatgatttgttgcgaga |
5068383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 5183412 - 5183269
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| | | ||| |||| ||||||||||| |||||| | ||| ||| ||||||||||||| ||| ||||||||||||| ||||| |
|
|
| T |
5183412 |
tgtttctttattgggatggacaggaatgatgttatacatatattaaatggtagcgaattttttgcagaaattggagtaagtgtccttgttgagagaagcc |
5183313 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttg |
145 |
Q |
| |
|
|||| ||| |||||| || |||||| ||| ||||||||||||| |
|
|
| T |
5183312 |
ttgtaactgttgatg-ataggaacaaactgcaaatgcatgatttg |
5183269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 5424295 - 5424446
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
|||||||||||||| |||| | ||||| |||| | || |||||| ||||| |||| ||||| ||| ||||||||||||| | ||||||||||||| || |
|
|
| T |
5424295 |
tgtttctttattggaatggacagaaatgatgttacacttatattaaatggatgtggactttttgctgaaattggaataagtatccttgttgagcggagtc |
5424394 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||| ||| |||||| || |||| ||||||||||||||||||||||||||| |
|
|
| T |
5424395 |
ttgtcactgttgatg-ataataacaaacttggaatgcatgatttgttgcgaga |
5424446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5175408 - 5175556
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| | ||||| |||| ||||||||||| ||||| |||| | ||| ||||||| |||||||| |||||| ||||||||||||| |
|
|
| T |
5175408 |
tgtttctttattgggatggacagaaatgatgttatacatatattaaatggctgtggattttttgcagaagatggaataagtgtcctggttgagcgaagct |
5175507 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcg |
150 |
Q |
| |
|
| || || ||||| ||| |||| |||||||||||| |||||||||| |
|
|
| T |
5175508 |
tagtaacggttgat-aataaaaacaagcttggaatgcataatttgttgcg |
5175556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 5158961 - 5158810
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||| | || | || |||||| ||||| |||||||||| || ||||||||||||| ||||||||||||| || |
|
|
| T |
5158961 |
tgtttctttatagggatggaccgaaatgacgttacacttatattaaatggatgtgaactttttggtgaaattggaataagcatccttgttgagcgtagtc |
5158862 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||| ||| |||||| | ||||| ||||||||||||||||||||||||||| |
|
|
| T |
5158861 |
ttgttactgttgatg-gtaagaacaaacttggaatgcatgatttgttgcgaga |
5158810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 5261606 - 5261455
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
|||||||| ||||| |||| ||||||| |||| |||| |||| |||| |||| |||| |||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
5261606 |
tgtttcttaattggaatggaccgaaatgatgttatactcgtattaaatgactgtggacttcatgcagaaattggaataagcgtccttgttgagagaagcc |
5261507 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||||| | |||||| || ||||| ||||||||||||| |||||||||||| |
|
|
| T |
5261506 |
ttgtgagtgttgatg-ataagaacatgcttggaatgcatggtttgttgcgaga |
5261455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 5285605 - 5285454
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
|||||||| ||||| |||| | ||||| |||| |||| |||| |||| |||| ||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
5285605 |
tgtttcttaattggaatggacagaaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagcc |
5285506 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||||| | |||||| || ||||| ||||||||||||| |||| ||||||| |
|
|
| T |
5285505 |
ttgtgagtgttgatg-ataagaacatgcttggaatgcatggtttgctgcgaga |
5285454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 5356076 - 5355933
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||| | ||||||| ||| | || ||||| ||||| |||| ||||||||| ||||||||||||| | | ||||||||||||||| |
|
|
| T |
5356076 |
tgtttctttattgggatcgaccgaaatgatgctacactaatattaaatggatgtggactttatgctgaaattggaataagtattcttgttgagcgaagcc |
5355977 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttg |
145 |
Q |
| |
|
|||| ||| |||||| || ||| || ||| |||||||||||||| |
|
|
| T |
5355976 |
ttgtaactgttgatg-ataagaataggcttagaatgcatgatttg |
5355933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5445619 - 5445734
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||| | ||||||| || |||| |||| |||| | |||| |||| ||| | ||||| ||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
5445619 |
tgtttctttgtcgggatggaccaaaatgatgttatacttttattaaatgattgcggactttctgcagaaattggaataagtgtccttgttgctcgaagcc |
5445718 |
T |
|
| Q |
101 |
ttgtgactattgatga |
116 |
Q |
| |
|
|||||||| ||||||| |
|
|
| T |
5445719 |
ttgtgactgttgatga |
5445734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 353
Target Start/End: Complemental strand, 5353199 - 5353097
Alignment:
| Q |
251 |
tgataattatccaaattggttgaccttctacagtgaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgc |
350 |
Q |
| |
|
||||| ||||||||||||||| ||||||||| |||||||||||| ||| |||| | || |||| |||||||||||| |||||| |||||||| ||| |
|
|
| T |
5353199 |
tgatagttatccaaattggttaaccttctactctgaaggttcttctgtaacttttcatgtccctctggtggaagggcgtaacttgaagacaatgatgtgc |
5353100 |
T |
|
| Q |
351 |
att |
353 |
Q |
| |
|
||| |
|
|
| T |
5353099 |
att |
5353097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 5133330 - 5133214
Alignment:
| Q |
36 |
acatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagctttgtgactattgatgaattggaacagacttggaat |
135 |
Q |
| |
|
||||||||| |||||||||| ||||| ||| ||||||||||||| | | ||| ||||| ||||| |||| ||| |||||| | | |||| |||||||| |
|
|
| T |
5133330 |
acatatattaaatggttgtggactttttgccgaaattggaataagtattcttattgagagaagccttgtaactgttgatg-ctaaggacaggcttggaat |
5133232 |
T |
|
| Q |
136 |
gcatgatttgttgcgaga |
153 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
5133231 |
gcatgatttgttgagaga |
5133214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 5382191 - 5382335
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
|||||||||||||| |||| |||||| |||| | ||| ||||| ||||| |||| |||| ||| || || ||||||| ||||||||||||| ||||| |
|
|
| T |
5382191 |
tgtttctttattgg-atggaccgaaacgatgttacacaaatattaaatgggtgtgggctttttgctgatatcggaataagtgtccttgttgagagaagcc |
5382289 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgtt |
147 |
Q |
| |
|
|||| ||| | |||| || ||| | ||||||||||||||||||||| |
|
|
| T |
5382290 |
ttgtaactgtcgatg-ataagaatacacttggaatgcatgatttgtt |
5382335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 355
Target Start/End: Complemental strand, 5101120 - 5101050
Alignment:
| Q |
285 |
gaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgt |
355 |
Q |
| |
|
||||||||||| ||| ||| ||||| |||| ||||||||||||| |||||| |||||||| |||||||| |
|
|
| T |
5101120 |
gaaggttcttctgtaactttagaagtccctcaagtggaagggcgtaacttgaagacaatgatgtgcattgt |
5101050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 355
Target Start/End: Complemental strand, 5136221 - 5136151
Alignment:
| Q |
285 |
gaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgt |
355 |
Q |
| |
|
||||||||||| ||| ||| ||||| |||| ||||||||||||| |||||| |||||||| |||||||| |
|
|
| T |
5136221 |
gaaggttcttctgtaactttagaagtccctcaagtggaagggcgtaacttgaagacaatgatgtgcattgt |
5136151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 5351411 - 5351460
Alignment:
| Q |
303 |
tttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcat |
352 |
Q |
| |
|
|||||||| |||| |||||||||||||| |||||| |||||||| ||||| |
|
|
| T |
5351411 |
tttgaagttcctcaagtggaagggcgtgacttgaagacaatgatgtgcat |
5351460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 355
Target Start/End: Original strand, 2938920 - 2938972
Alignment:
| Q |
303 |
tttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgt |
355 |
Q |
| |
|
|||||||| |||| ||||||||||||| |||||| |||||||| |||||||| |
|
|
| T |
2938920 |
tttgaagttcctcaagtggaagggcgtaacttgaagacaatgatgtgcattgt |
2938972 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 5156297 - 5156245
Alignment:
| Q |
303 |
tttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgcattgt |
355 |
Q |
| |
|
|||||||| |||| ||||||||||||| |||||| |||||||| |||||||| |
|
|
| T |
5156297 |
tttgaagttcctcaagtggaagggcgtaacttgaagacaatgatgtgcattgt |
5156245 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 36215352 - 36215201
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| | ||||| |||| ||||||||||| ||||| ||||||||| ||||||||||||| ||| ||| ||||| ||||||||| |
|
|
| T |
36215352 |
tgtttctttattgggatggacagaaatgatgttatacatatattaaatggaagtgaactttttgcagaaattggagtaagtgttcttgtagagcgaagcc |
36215253 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||| ||| |||||| || ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
36215252 |
ttgtaactgttgatg-ataggaacaggcttggaatgcatgatttgctgcgaga |
36215201 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 8876343 - 8876491
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatata--ttgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaag |
98 |
Q |
| |
|
||||||||||||||||||| ||||||| |||| ||||||||| || ||||| |||||||||||| | ||||||||||||| ||| |||||||| ||||| |
|
|
| T |
8876343 |
tgtttctttattgggatggaccgaaatgatgttatacatatattttaaatgggtgtgaactttatcctgaaattggaataagtgttcttgttgaacgaag |
8876442 |
T |
|
| Q |
99 |
ctttgtgactattgatgaattggaacagacttggaatgcatgatttgttg |
148 |
Q |
| |
|
| |||| || || |||||| |||| | ||||||||||||||||||||| |
|
|
| T |
8876443 |
ccttgtaaccatggatgaa-aggaatatgcttggaatgcatgatttgttg |
8876491 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 22585779 - 22585630
Alignment:
| Q |
3 |
tttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagcttt |
102 |
Q |
| |
|
|||||| ||||| |||| ||||||| |||| |||| ||||| |||| |||| |||| |||||||||||||||||| |||||||||||| ||||| || |
|
|
| T |
22585779 |
tttcttaattggaatggaccgaaatgatgttatactcatattaaatgactgtggacttcatgcagaaattggaataagcgtccttgttgagagaagcctt |
22585680 |
T |
|
| Q |
103 |
gtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|||| | |||||| || |||||| |||||||||||||||||| ||||||| |
|
|
| T |
22585679 |
gtgagtgttgatg-ataagaacaggcttggaatgcatgatttgctgcgaga |
22585630 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 10128 - 9977
Alignment:
| Q |
1 |
tgtttctttattgggatggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaatgtccttgttgagcgaagct |
100 |
Q |
| |
|
||||||||||||||||||| |||||| |||| | ||| ||||| ||||| |||| ||||| ||| | || ||||||| ||||||||||||||||||| |
|
|
| T |
10128 |
tgtttctttattgggatggaccgaaacgatgttacacaaatattaaatggatgtggactttttgctaatatcggaataagtgtccttgttgagcgaagcc |
10029 |
T |
|
| Q |
101 |
ttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga |
153 |
Q |
| |
|
|| | ||| | |||| || ||| | |||||||||||||||||| || ||||| |
|
|
| T |
10028 |
ttctaactgtcgatg-ataagaatacacttggaatgcatgatttattacgaga |
9977 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 29; Significance: 0.0000005; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 355
Target Start/End: Complemental strand, 47985729 - 47985625
Alignment:
| Q |
251 |
tgataattatccaaattggttgaccttctacagtgaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgc |
350 |
Q |
| |
|
||||| ||||||||||||||| ||||| | |||||||||||| ||| ||||||||| |||| ||||||| ||| | ||| || |||||||| ||| |
|
|
| T |
47985729 |
tgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgc |
47985630 |
T |
|
| Q |
351 |
attgt |
355 |
Q |
| |
|
||||| |
|
|
| T |
47985629 |
attgt |
47985625 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 355
Target Start/End: Complemental strand, 47995016 - 47994912
Alignment:
| Q |
251 |
tgataattatccaaattggttgaccttctacagtgaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgc |
350 |
Q |
| |
|
||||| ||||||||||||||| ||||| | |||||||||||| ||| ||||||||| |||| ||||||| ||| | ||| || |||||||| ||| |
|
|
| T |
47995016 |
tgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgc |
47994917 |
T |
|
| Q |
351 |
attgt |
355 |
Q |
| |
|
||||| |
|
|
| T |
47994916 |
attgt |
47994912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 355
Target Start/End: Complemental strand, 48004303 - 48004199
Alignment:
| Q |
251 |
tgataattatccaaattggttgaccttctacagtgaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgc |
350 |
Q |
| |
|
||||| ||||||||||||||| ||||| | |||||||||||| ||| ||||||||| |||| ||||||| ||| | ||| || |||||||| ||| |
|
|
| T |
48004303 |
tgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgc |
48004204 |
T |
|
| Q |
351 |
attgt |
355 |
Q |
| |
|
||||| |
|
|
| T |
48004203 |
attgt |
48004199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 355
Target Start/End: Complemental strand, 48013588 - 48013484
Alignment:
| Q |
251 |
tgataattatccaaattggttgaccttctacagtgaaggttcttcaataatttttgaagtacctcgagtggaagggcgtgtcttgaaaacaatgatttgc |
350 |
Q |
| |
|
||||| ||||||||||||||| ||||| | |||||||||||| ||| ||||||||| |||| ||||||| ||| | ||| || |||||||| ||| |
|
|
| T |
48013588 |
tgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgc |
48013489 |
T |
|
| Q |
351 |
attgt |
355 |
Q |
| |
|
||||| |
|
|
| T |
48013488 |
attgt |
48013484 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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