View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18694_low_4 (Length: 585)

Name: NF18694_low_4
Description: NF18694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18694_low_4
NF18694_low_4
[»] chr5 (7 HSPs)
chr5 (93-567)||(13299537-13300009)
chr5 (1-83)||(13300041-13300123)
chr5 (1-83)||(13301737-13301819)
chr5 (5-82)||(8880873-8880950)
chr5 (5-82)||(32685128-32685205)
chr5 (9-83)||(5513409-5513483)
chr5 (28-83)||(39413583-39413638)
[»] chr4 (2 HSPs)
chr4 (5-82)||(25750459-25750536)
chr4 (8-82)||(45039353-45039427)
[»] chr2 (3 HSPs)
chr2 (5-82)||(5245910-5245987)
chr2 (7-83)||(27282520-27282596)
chr2 (9-82)||(43311961-43312034)
[»] chr1 (11 HSPs)
chr1 (7-82)||(2271865-2271940)
chr1 (8-82)||(2711831-2711905)
chr1 (9-83)||(17983386-17983460)
chr1 (8-82)||(34405774-34405848)
chr1 (9-82)||(34408911-34408984)
chr1 (7-82)||(5344201-5344276)
chr1 (5-82)||(2273266-2273343)
chr1 (7-82)||(31565463-31565538)
chr1 (8-63)||(25493208-25493263)
chr1 (8-55)||(34410353-34410400)
chr1 (9-83)||(42054556-42054630)
[»] scaffold0471 (1 HSPs)
scaffold0471 (8-82)||(1282-1356)
[»] chr8 (2 HSPs)
chr8 (8-82)||(36111409-36111483)
chr8 (8-64)||(10436528-10436584)
[»] chr7 (2 HSPs)
chr7 (9-83)||(41294149-41294223)
chr7 (8-82)||(45940023-45940097)
[»] chr6 (1 HSPs)
chr6 (5-83)||(5635429-5635507)
[»] chr3 (1 HSPs)
chr3 (8-82)||(43559542-43559616)


Alignment Details
Target: chr5 (Bit Score: 395; Significance: 0; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 93 - 567
Target Start/End: Complemental strand, 13300009 - 13299537
Alignment:
Q  93 atcaaaattagagtctactatttatagtatttgtatttgtaacgtgtcaaagatttaacggctgacggcgccatagaaatgctcaaaacaaatacgcagt 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13300009 atcaaaattagagtctactatttatagtatttgtatttgtaacgtgtcaaagatttaacggctgacggcgccatagaaatgctcaaaacaaatacgcagt 13299910  T
Q  193 attattatattcttatacctatagttctccttgaataatgaaatacttcactgtagaaagtacatttaaaattcacaactcacgagtcgcagcagtgatc 292  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  13299909 attattatattcttatacttatagttctccttgaataatgaaatacttcactgtagaaagtacattt-acattcacaactcacgagtcgcagcagtgatc 13299811  T
Q  293 tataatattatttaaatcaacatagatattctaatctaactaagcaccttcttccctttcatccaatacctttctgcttataaaactttctctttgcatc 392  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  13299810 tataatattatttaaatcaacatagatattctaatctaactaagcaccttcttccctttcacccaatacctttctgcttataaaactttctc-ttgcatc 13299712  T
Q  393 ttacaact--caaaatggaaactcttcttcctgcaccaacaatcactctcactcatctttaatcaatattaaccaagtaagattcttaagcttgtgtttt 490  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13299711 ttacaactcacaaaatggaaactcttcttcctgcaccatcaatcaccctcactcatctttaatcaatattaaccaagtaagattcttaagcttgtgtttt 13299612  T
Q  491 attttcannnnnnnnnnctatttatacataaagtcaaagaaattatctaactgtttaattaacaaaccctagctagg 567  Q
    |||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13299611 attttca--ttttttttctatttatacataaagtcaaagaaattatctaactgtttaattaacaaaccctagctagg 13299537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 13300123 - 13300041
Alignment:
Q  1 atataaatggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggccaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  13300123 atataaatggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgagacctgcatgggccaa 13300041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 13301819 - 13301737
Alignment:
Q  1 atataaatggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggccaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  13301819 atataaatggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgagacctgcatgggccaa 13301737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 8880950 - 8880873
Alignment:
Q  5 aaatggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  8880950 aaatggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 8880873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 32685205 - 32685128
Alignment:
Q  5 aaatggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  32685205 aaatggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 32685128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 5513483 - 5513409
Alignment:
Q  9 ggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggccaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| |||||||||||||||    
T  5513483 ggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggccaa 5513409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 39413583 - 39413638
Alignment:
Q  28 ttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggccaa 83  Q
    |||||||||||||||| |||||| ||||  ||||||| ||||||| ||||||||||    
T  39413583 ttagagcgtcgtgctattaacgcgaaggtcgcaggtttgagacctacatgggccaa 39413638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 25750459 - 25750536
Alignment:
Q  5 aaatggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  25750459 aaatggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 25750536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 45039353 - 45039427
Alignment:
Q  8 tggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  45039353 tggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 45039427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 5245910 - 5245987
Alignment:
Q  5 aaatggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  5245910 aaatggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 5245987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 27282520 - 27282596
Alignment:
Q  7 atggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggccaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| |||||||||||||||    
T  27282520 atggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggccaa 27282596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 43312034 - 43311961
Alignment:
Q  9 ggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  43312034 ggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 43311961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 2271865 - 2271940
Alignment:
Q  7 atggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||||||||||    
T  2271865 atggcccattagctcagttggttagagcgttgtgctaataacgcaaaggtcgcaggttcgaaacctgcatgggcca 2271940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 2711905 - 2711831
Alignment:
Q  8 tggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  2711905 tggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 2711831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 17983460 - 17983386
Alignment:
Q  9 ggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggccaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| |||||||||||||||    
T  17983460 ggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggccaa 17983386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 34405774 - 34405848
Alignment:
Q  8 tggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  34405774 tggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 34405848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 34408911 - 34408984
Alignment:
Q  9 ggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  34408911 ggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 34408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 5344201 - 5344276
Alignment:
Q  7 atggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    ||||||||||| || ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  5344201 atggcccattaacttagtgggttagagcgtcgtgctaataacgcgaaggttgcaggttcgagacctgcatgggcca 5344276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 2273266 - 2273343
Alignment:
Q  5 aaatggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    ||||||||||||||||||||||||||||| || ||||||||||||| ||||  ||||||| |||||||||||||||||    
T  2273266 aaatggcccattagctcagttggttagagtgttgtgctaataacgcgaaggtcgcaggtttgagacctgcatgggcca 2273343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 31565538 - 31565463
Alignment:
Q  7 atggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    |||||||||||||| ||||||||||||||||||||||||||||  ||||  |||||||||| ||||||||||||||    
T  31565538 atggcccattagcttagttggttagagcgtcgtgctaataacgtgaaggtcgcaggttcgaaacctgcatgggcca 31565463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 25493208 - 25493263
Alignment:
Q  8 tggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggt 63  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  25493208 tggcctattagctcagttggttagagcgtcgtgctaataacgcgaaggttgcaggt 25493263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 34410353 - 34410400
Alignment:
Q  8 tggcccattagctcagttggttagagcgtcgtgctaataacgcaaagg 55  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  34410353 tggcccattagctcagttggttagagtgtcgtgctaataacgcgaagg 34410400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 42054556 - 42054630
Alignment:
Q  9 ggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggccaa 83  Q
    |||| ||||||||| |||||||||| || |||||||||| |  ||||  ||||||||||||||||||||||||||    
T  42054556 ggcctattagctcaattggttagagtgtggtgctaataaggtcaaggtcgcaggttcgagacctgcatgggccaa 42054630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 1282 - 1356
Alignment:
Q  8 tggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  1282 tggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 1356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 36111409 - 36111483
Alignment:
Q  8 tggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  36111409 tggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 36111483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 10436528 - 10436584
Alignment:
Q  8 tggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggtt 64  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||    
T  10436528 tggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggtt 10436584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 41294149 - 41294223
Alignment:
Q  9 ggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggccaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| |||||||||||||||    
T  41294149 ggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggccaa 41294223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 45940097 - 45940023
Alignment:
Q  8 tggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  45940097 tggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 45940023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 5635507 - 5635429
Alignment:
Q  5 aaatggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggccaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||| | |||||||||||||||    
T  5635507 aaatggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcaaaacctgcatgggccaa 5635429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 43559542 - 43559616
Alignment:
Q  8 tggcccattagctcagttggttagagcgtcgtgctaataacgcaaaggctgcaggttcgagacctgcatgggcca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  43559542 tggcccattagctcagttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggcca 43559616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University