View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18695_low_8 (Length: 318)
Name: NF18695_low_8
Description: NF18695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18695_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 38777701 - 38778010
Alignment:
| Q |
1 |
aatctgtattcactatcacattataccaaggctgactttggcttcagagtgccttttatataatgttgtaaaaggaccatgtacatgattttattaataa |
100 |
Q |
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| T |
38777701 |
aatctgtattcactatcacattataccaaggctgactttggcttcagagtgccttttatataatgttgtaaaaggaccatgtacatgattttattaataa |
38777800 |
T |
|
| Q |
101 |
tattcaacatttttgtccagcaacagaatctgtcggtgtctgtactcgtcctttgttaggctgacattgttgttgccaatccttccacttggtctatggt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
38777801 |
tattcaacatttttgtccagcaacagaatctgtcggtgtctgtactcgtcctttgttaggctgacattgttgttgtcaatccttccacttggtctatggt |
38777900 |
T |
|
| Q |
201 |
tcttgttctagactggtacaaactcactgcttctggtctaatatagaaactttttaattacttattttcgatgccctatttttgaattagatggattttg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
38777901 |
tcttgttctagactggtacaaactcactgcttctggtctaatatagaaactttttaattacttattttcgatgccctgtttttgaattagatggattttg |
38778000 |
T |
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| Q |
301 |
aatattcttc |
310 |
Q |
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|||||||||| |
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| T |
38778001 |
aatattcttc |
38778010 |
T |
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