View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18697_high_17 (Length: 243)
Name: NF18697_high_17
Description: NF18697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18697_high_17 |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 164161 - 163931
Alignment:
| Q |
1 |
ctaaccctttttatggtatcatgagcttttgcataacaacgaacttgatccatattttttgaacactctcagccatgtctgttgaatctctatccactac |
100 |
Q |
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| T |
164161 |
ctaaccctttttatggtatcatgagcttttgcataacaacgaacttgatccatattttttgaacactctcagccatgtctgttgaatctctatccactac |
164062 |
T |
|
| Q |
101 |
tgatattcttgtcaataatactcaattggttgtttctttcaacaaccatgcatctgccaaactaagtgtaacaaattatccagcatgcaaagttcagctc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
164061 |
tgatattcttgtcaataatactcaattggttgtttctttcaacaaccatgcatctgccaaactaagtgtaacaaattatccagcatgcaaagttcagctc |
163962 |
T |
|
| Q |
201 |
aaagcattactcattgcatatgaccttgttg |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
163961 |
aaagcattactcattgcatatgaccttgttg |
163931 |
T |
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