View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18697_high_22 (Length: 203)
Name: NF18697_high_22
Description: NF18697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18697_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 31442733 - 31442826
Alignment:
| Q |
26 |
ttaaaaatattcaatttctcttcatcttgttataataatcttaaaattaaaattacattaattatagacagtttcatatcataaataagttgag |
119 |
Q |
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| T |
31442733 |
ttaaaaatattcaatttgttttcatcttgttataataatcttaaaattaaaattacgttaatcatagacaatttcatatcataaataagttgag |
31442826 |
T |
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Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 31443165 - 31443223
Alignment:
| Q |
134 |
gggccctttatctctcgtctccttgatctcctccaaagcttttccattctctctgctcc |
192 |
Q |
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| T |
31443165 |
gggccctttatctctcatctctttgatctcctccaaagcttttccattctctctgctcc |
31443223 |
T |
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