View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18697_low_17 (Length: 245)
Name: NF18697_low_17
Description: NF18697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18697_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 5902337 - 5902125
Alignment:
| Q |
19 |
gtagagtacaactatcaataacatattataaagcttttattagtttattacaaaatatctcatacattcattcaaatataccttaattggtcccacccca |
118 |
Q |
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| T |
5902337 |
gtagagtacaactatcaataacatattataaagcttttattagtttattacaaaatatctcatacattcattcaaatataccttaattggtcccacccca |
5902238 |
T |
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| Q |
119 |
aaccctaacaagcccttcaccgttcattaaattaaaaaactaaagaccattggtttggcttgctcgttgaagatgccaaagtaatatttttagccccaca |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5902237 |
aaccctaacaagcccttcaccgttcattaaattaaaaaactaaagaccattggtttggcttgctcgttgaagatgccaaagtaatatttttagccccaca |
5902138 |
T |
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| Q |
219 |
cggtcctttaatt |
231 |
Q |
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||||||||||||| |
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| T |
5902137 |
cggtcctttaatt |
5902125 |
T |
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