View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18697_low_3 (Length: 583)

Name: NF18697_low_3
Description: NF18697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18697_low_3
NF18697_low_3
[»] chr8 (38 HSPs)
chr8 (359-554)||(34741359-34741554)
chr8 (130-314)||(34741551-34741735)
chr8 (134-199)||(5573398-5573463)
chr8 (140-198)||(7489720-7489778)
chr8 (130-199)||(6818125-6818194)
chr8 (130-199)||(14961664-14961733)
chr8 (141-201)||(28866930-28866990)
chr8 (132-199)||(27874682-27874749)
chr8 (132-199)||(28014859-28014926)
chr8 (6-44)||(34741821-34741859)
chr8 (133-204)||(2161498-2161569)
chr8 (132-199)||(22838335-22838402)
chr8 (157-199)||(8284569-8284611)
chr8 (133-199)||(12132094-12132160)
chr8 (133-199)||(26363991-26364057)
chr8 (132-185)||(297205-297258)
chr8 (157-202)||(13327939-13327984)
chr8 (154-199)||(13496710-13496755)
chr8 (154-199)||(38212945-38212990)
chr8 (154-199)||(45006101-45006146)
chr8 (132-199)||(12189589-12189656)
chr8 (132-199)||(12434017-12434084)
chr8 (145-199)||(3306056-3306110)
chr8 (141-199)||(7977997-7978055)
chr8 (157-199)||(10129238-10129280)
chr8 (155-205)||(12958633-12958683)
chr8 (157-199)||(18567417-18567459)
chr8 (157-199)||(31263034-31263076)
chr8 (149-199)||(32089467-32089517)
chr8 (141-197)||(23840375-23840432)
chr8 (132-185)||(24993449-24993502)
chr8 (130-199)||(26682176-26682245)
chr8 (130-199)||(31812221-31812290)
chr8 (154-202)||(14391575-14391623)
chr8 (135-199)||(16445737-16445801)
chr8 (156-200)||(34107170-34107214)
chr8 (141-193)||(36967077-36967129)
chr8 (159-199)||(40225988-40226028)
[»] chr3 (25 HSPs)
chr3 (132-205)||(8165756-8165829)
chr3 (132-202)||(42180162-42180232)
chr3 (132-199)||(1569191-1569258)
chr3 (130-199)||(3861504-3861571)
chr3 (132-197)||(23803049-23803114)
chr3 (130-205)||(40497155-40497230)
chr3 (136-199)||(50204517-50204580)
chr3 (133-199)||(2571379-2571445)
chr3 (133-199)||(10307877-10307943)
chr3 (132-202)||(54527704-54527774)
chr3 (154-199)||(40930183-40930228)
chr3 (156-205)||(46845138-46845187)
chr3 (131-202)||(37055364-37055435)
chr3 (132-199)||(51401550-51401617)
chr3 (132-199)||(51618157-51618224)
chr3 (157-199)||(3863464-3863506)
chr3 (157-199)||(23523081-23523123)
chr3 (157-199)||(38389582-38389624)
chr3 (154-199)||(15269161-15269206)
chr3 (131-204)||(29686429-29686502)
chr3 (146-174)||(7220265-7220293)
chr3 (131-199)||(20938166-20938234)
chr3 (143-199)||(25633119-25633175)
chr3 (159-199)||(33474474-33474514)
chr3 (130-174)||(33885552-33885596)
[»] chr7 (31 HSPs)
chr7 (132-199)||(25709400-25709467)
chr7 (133-205)||(33343099-33343171)
chr7 (132-199)||(4969883-4969950)
chr7 (133-199)||(29692541-29692607)
chr7 (133-206)||(34270372-34270445)
chr7 (153-205)||(820536-820588)
chr7 (145-197)||(24462958-24463010)
chr7 (133-201)||(44473511-44473579)
chr7 (132-199)||(29398135-29398202)
chr7 (145-204)||(33072104-33072163)
chr7 (132-199)||(45501569-45501636)
chr7 (130-204)||(5833463-5833537)
chr7 (132-198)||(26037203-26037269)
chr7 (154-204)||(39757106-39757156)
chr7 (133-199)||(46290121-46290187)
chr7 (145-198)||(18102232-18102285)
chr7 (134-199)||(46569814-46569878)
chr7 (157-204)||(3561874-3561921)
chr7 (132-199)||(7899487-7899554)
chr7 (145-199)||(8091313-8091367)
chr7 (157-199)||(9332096-9332138)
chr7 (157-199)||(22334022-22334064)
chr7 (157-199)||(48445199-48445241)
chr7 (141-198)||(2443906-2443963)
chr7 (130-199)||(7170110-7170179)
chr7 (157-198)||(42750418-42750459)
chr7 (131-199)||(7040253-7040321)
chr7 (131-199)||(19889449-19889517)
chr7 (155-199)||(26050462-26050506)
chr7 (155-199)||(26059821-26059865)
chr7 (134-198)||(28323247-28323311)
[»] chr1 (30 HSPs)
chr1 (130-199)||(41676561-41676630)
chr1 (130-199)||(25465266-25465335)
chr1 (154-202)||(5875213-5875261)
chr1 (130-198)||(32543052-32543120)
chr1 (132-199)||(6180296-6180363)
chr1 (132-199)||(36490889-36490956)
chr1 (155-205)||(34802100-34802150)
chr1 (133-199)||(35512836-35512902)
chr1 (154-199)||(3611883-3611928)
chr1 (135-200)||(32201737-32201802)
chr1 (134-199)||(43317575-43317640)
chr1 (157-205)||(313884-313932)
chr1 (131-199)||(6307611-6307679)
chr1 (132-199)||(13321986-13322053)
chr1 (132-199)||(22167445-22167512)
chr1 (132-199)||(23591808-23591875)
chr1 (156-199)||(25532343-25532386)
chr1 (152-199)||(51382444-51382491)
chr1 (145-199)||(1502721-1502775)
chr1 (157-199)||(6569986-6570028)
chr1 (145-199)||(23576415-23576469)
chr1 (157-199)||(30172014-30172056)
chr1 (157-199)||(30187555-30187597)
chr1 (154-204)||(38812872-38812922)
chr1 (141-199)||(39310787-39310845)
chr1 (132-174)||(47355404-47355446)
chr1 (130-199)||(6754579-6754648)
chr1 (146-199)||(35438839-35438892)
chr1 (131-199)||(9516690-9516758)
chr1 (147-199)||(11013395-11013447)
[»] chr6 (20 HSPs)
chr6 (132-204)||(34692464-34692536)
chr6 (159-199)||(8467790-8467830)
chr6 (133-204)||(14228122-14228193)
chr6 (150-204)||(2830677-2830731)
chr6 (130-204)||(17596449-17596523)
chr6 (133-199)||(28943770-28943836)
chr6 (154-199)||(13391807-13391852)
chr6 (154-199)||(29863303-29863348)
chr6 (131-204)||(31069578-31069651)
chr6 (131-204)||(31503851-31503924)
chr6 (134-174)||(30738123-30738163)
chr6 (132-199)||(3261188-3261255)
chr6 (130-205)||(8977461-8977536)
chr6 (157-199)||(10887164-10887206)
chr6 (133-199)||(17552588-17552654)
chr6 (153-199)||(24979150-24979196)
chr6 (157-202)||(6016991-6017036)
chr6 (156-196)||(20979106-20979146)
chr6 (155-199)||(27819628-27819672)
chr6 (155-199)||(31790917-31790961)
[»] chr5 (19 HSPs)
chr5 (132-199)||(3398330-3398397)
chr5 (131-199)||(31365951-31366019)
chr5 (131-199)||(32019985-32020053)
chr5 (132-199)||(23995417-23995484)
chr5 (141-199)||(15240951-15241009)
chr5 (133-199)||(30839892-30839958)
chr5 (133-199)||(36597690-36597756)
chr5 (131-204)||(2795632-2795705)
chr5 (152-205)||(29855892-29855945)
chr5 (145-198)||(30893752-30893805)
chr5 (131-199)||(12641994-12642062)
chr5 (130-174)||(25395344-25395388)
chr5 (157-204)||(14466490-14466537)
chr5 (132-199)||(14695114-14695181)
chr5 (157-199)||(4047547-4047589)
chr5 (133-199)||(6863667-6863733)
chr5 (130-199)||(8103581-8103650)
chr5 (130-199)||(41350310-41350379)
chr5 (154-202)||(34578143-34578191)
[»] chr4 (35 HSPs)
chr4 (132-199)||(18882268-18882335)
chr4 (141-200)||(55813983-55814042)
chr4 (150-204)||(16667380-16667434)
chr4 (133-199)||(50352413-50352479)
chr4 (132-205)||(19450895-19450968)
chr4 (132-201)||(52391408-52391477)
chr4 (130-199)||(53376409-53376478)
chr4 (132-204)||(17409934-17410006)
chr4 (132-197)||(24684947-24685012)
chr4 (130-199)||(49181180-49181249)
chr4 (131-199)||(29190817-29190885)
chr4 (132-204)||(34941388-34941460)
chr4 (130-198)||(42479894-42479962)
chr4 (132-199)||(19468304-19468371)
chr4 (132-199)||(23545586-23545653)
chr4 (134-193)||(30192383-30192442)
chr4 (157-204)||(35999943-35999990)
chr4 (157-199)||(27362526-27362568)
chr4 (133-199)||(39876941-39877007)
chr4 (133-199)||(44916644-44916710)
chr4 (157-199)||(47326893-47326935)
chr4 (157-199)||(47341689-47341731)
chr4 (157-199)||(48910803-48910845)
chr4 (131-205)||(49228763-49228837)
chr4 (157-199)||(54495638-54495680)
chr4 (130-183)||(2096979-2097032)
chr4 (154-199)||(3085802-3085847)
chr4 (160-201)||(9971659-9971700)
chr4 (157-202)||(23553705-23553750)
chr4 (134-199)||(25843406-25843471)
chr4 (134-199)||(40049670-40049735)
chr4 (159-199)||(4779437-4779477)
chr4 (131-199)||(7349797-7349865)
chr4 (145-205)||(9759137-9759197)
chr4 (132-204)||(51691451-51691523)
[»] scaffold0111 (2 HSPs)
scaffold0111 (141-199)||(41101-41159)
scaffold0111 (130-199)||(37115-37184)
[»] chr2 (28 HSPs)
chr2 (130-200)||(6765108-6765178)
chr2 (131-199)||(20566018-20566086)
chr2 (132-199)||(9747427-9747494)
chr2 (141-199)||(9895131-9895189)
chr2 (154-199)||(8065255-8065300)
chr2 (141-198)||(26003348-26003405)
chr2 (131-198)||(19228534-19228601)
chr2 (132-199)||(24729578-24729645)
chr2 (132-199)||(29157830-29157897)
chr2 (132-175)||(36612756-36612799)
chr2 (132-175)||(36620607-36620650)
chr2 (133-199)||(5583559-5583625)
chr2 (157-199)||(6109524-6109566)
chr2 (133-199)||(7757787-7757853)
chr2 (144-198)||(15411624-15411678)
chr2 (157-199)||(16126560-16126602)
chr2 (133-199)||(38248421-38248487)
chr2 (157-198)||(14377559-14377600)
chr2 (157-202)||(16123413-16123458)
chr2 (130-199)||(23932673-23932742)
chr2 (141-174)||(39607434-39607467)
chr2 (130-199)||(43388482-43388551)
chr2 (130-199)||(45062306-45062375)
chr2 (159-199)||(5853464-5853504)
chr2 (131-199)||(9450366-9450434)
chr2 (159-199)||(16493533-16493573)
chr2 (131-199)||(27665045-27665113)
chr2 (131-199)||(36731289-36731357)
[»] scaffold0061 (1 HSPs)
scaffold0061 (131-204)||(52775-52848)
[»] scaffold0017 (1 HSPs)
scaffold0017 (131-204)||(145786-145859)
[»] scaffold0011 (1 HSPs)
scaffold0011 (154-199)||(13217-13262)
[»] scaffold0073 (1 HSPs)
scaffold0073 (131-199)||(16536-16604)
[»] scaffold0018 (1 HSPs)
scaffold0018 (157-199)||(182177-182219)
[»] scaffold0727 (1 HSPs)
scaffold0727 (157-202)||(5826-5871)
[»] scaffold0192 (1 HSPs)
scaffold0192 (131-199)||(13564-13632)


Alignment Details
Target: chr8 (Bit Score: 180; Significance: 6e-97; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 359 - 554
Target Start/End: Complemental strand, 34741554 - 34741359
Alignment:
Q  359 taatccaattcatcgtttcctctttctcatatttatgtaaacaacaactttaaactcaagcataaacccacttaaatcacagcatgagaaaactatacgc 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34741554 taatccaattcatcgtttcctctttctcatatttatgtaaacaacaactttaaactcaagcataaacccacttaaatcacagcatgagaaaactctacgc 34741455  T
Q  459 atgtttgatatcgtggtggtttggacaaacacggtgattttgacaaagctataaagtgttgtttttgcaatgttctaaccaagtcaacaacataag 554  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34741454 atgtttgatatcgtggtggtttggacaaacacagtgattttgataaagctataaagtggtgtttttgcaatgttctaaccaagtcaacaacataag 34741359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 130 - 314
Target Start/End: Complemental strand, 34741735 - 34741551
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccattgcttcttggataatcaatatattt 229  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||    
T  34741735 gcacaagttctaatacaaacttattattttaaactttttaacatgaacaaatttacatatgatagaaaaattcattgcttctcggataatcaatatattt 34741636  T
Q  230 gcacccttaacctactattaattattaactgtaacgaaatatagttatatcattctccctttcatgtctttgtctacatggtaat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34741635 gcacccttaacctactattaattattaactgtaacgaaatatagttatatcattctccctttcatgtctttgtctacatggtaat 34741551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 5573398 - 5573463
Alignment:
Q  134 aagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| ||||  |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  5573398 aagttctaatgcaaaagtattattttaaacttcttaacatgtacaaatttgcacatgatagaaaaa 5573463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 7489720 - 7489778
Alignment:
Q  140 taatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||| |||||||||||    
T  7489720 taatacaaacttattattttaaaattctaaacatgcacaaatttgcacatgatagaaaa 7489778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 6818125 - 6818194
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||  ||||||  ||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  6818125 gcacaagttccgatacaattttactattttaaacttcttaacatgtacaaatttgcacatgatagaaaaa 6818194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 14961733 - 14961664
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| |||||||| ||| |||||||||||||||| ||||  |||||||||| ||||||||||||    
T  14961733 gcacaagttccaatacaaaattactattttaaacttcttagcatgtgcaaatttgcacatgatagaaaaa 14961664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 28866990 - 28866930
Alignment:
Q  141 aatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatc 201  Q
    ||||||||| |||||||||||||||||||| ||  ||||||||||| ||||||||||||||    
T  28866990 aatacaaacatattattttaaacttcttaatatatacaaatttgcacatgatagaaaaatc 28866930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 27874749 - 27874682
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||| ||  |||||||||||||||||||||  |||||||||| ||||||||||||    
T  27874749 acaagttccaatacaaaatttgtattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 27874682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 28014926 - 28014859
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||| ||  |||||||||||||||||||||  |||||||||| ||||||||||||    
T  28014926 acaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 28014859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 34741859 - 34741821
Alignment:
Q  6 tgcttatcgaatattgacggtcacaaatattcaaatatg 44  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34741859 tgcttatcgaatattgacggtcacaaatattcaaatatg 34741821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 2161498 - 2161569
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| |||||||||||| ||||    
T  2161498 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccat 2161569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 22838335 - 22838402
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||||  ||| || ||||||||||||||||||||||  |||||||||| ||||||||||||    
T  22838335 acaagttttaatgtaaagtttttattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 22838402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 8284611 - 8284569
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  8284611 tttaaacttcttaacatgtacaaatttgcacatgatagaaaaa 8284569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 12132094 - 12132160
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| |||||||||||| || |||||| |||||||||||  ||| |||||| ||||||||||||    
T  12132094 caagttccaatacaaacttactactttaaatttcttaacatgtgcaagtttgcagatgatagaaaaa 12132160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 26364057 - 26363991
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  26364057 caagttccaatgcaaagttactattttaaatttcttaacatgcgcaaatttgcacatgatagaaaaa 26363991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 297205 - 297258
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgc 185  Q
    |||||||  |||||||| |||||||||||||||||||||||||  |||||||||    
T  297205 acaagtttcaatacaaagttattattttaaacttcttaacatgtgcaaatttgc 297258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 13327984 - 13327939
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaatcc 202  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||    
T  13327984 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaatcc 13327939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 13496755 - 13496710
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||    
T  13496755 tattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 13496710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 38212990 - 38212945
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||    
T  38212990 tattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 38212945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 45006101 - 45006146
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||    
T  45006101 tattttaaacttcttaacatgtgcaaatttgcttatgatagaaaaa 45006146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 12189656 - 12189589
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||| ||| ||  |||||||||||||||| ||||  |||||||||| ||||||||||||    
T  12189656 acaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 12189589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 12434084 - 12434017
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||| ||| ||  |||||||||||||||| ||||  |||||||||| ||||||||||||    
T  12434084 acaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 12434017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 3306110 - 3306056
Alignment:
Q  145 caaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  3306110 caaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 3306056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 7977997 - 7978055
Alignment:
Q  141 aatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||  ||||||||||| |||||||   |||||||||||||||||||||||    
T  7977997 aatacaaaattaccattttaaactttttaacatttgcaaatttgcatatgatagaaaaa 7978055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 10129238 - 10129280
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  10129238 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 10129280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 12958633 - 12958683
Alignment:
Q  155 attttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    ||||||| |||||||| ||| ||||||||||| |||||||||||| |||||    
T  12958633 attttaagcttcttaatatgtacaaatttgcacatgatagaaaaacccatt 12958683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 18567459 - 18567417
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  18567459 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 18567417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 31263034 - 31263076
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||||  |||||||||||||||||||||||    
T  31263034 tttaaactacttaacatgtgcaaatttgcatatgatagaaaaa 31263076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 32089517 - 32089467
Alignment:
Q  149 cttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||| ||||||||||| |||||||||  ||||||||||||| |||||||||    
T  32089517 cttactattttaaactgcttaacatgtgcaaatttgcatataatagaaaaa 32089467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 23840375 - 23840432
Alignment:
Q  141 aatacaaacttattatttt-aaacttcttaacatgaacaaatttgcatatgatagaaa 197  Q
    |||||||| |||||||||| ||||||||||| |||  |||||||||||||||| ||||    
T  23840375 aatacaaatttattatttttaaacttcttaatatgtgcaaatttgcatatgatggaaa 23840432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 24993449 - 24993502
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgc 185  Q
    |||| |||||||||||| || |||||||||| |||||||||||  |||||||||    
T  24993449 acaaattctaatacaaaatttttattttaaatttcttaacatgtgcaaatttgc 24993502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 26682176 - 26682245
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| ||  |||| ||| || |||||| |||||||||||  |||||||||| ||||||||||||    
T  26682176 gcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 26682245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 31812221 - 31812290
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| ||  |||| |||  |||||||||||||||| |||  |||||||||| ||||||||||||    
T  31812221 gcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaatttgcacatgatagaaaaa 31812290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 14391623 - 14391575
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatcc 202  Q
    |||||||||||||||||||||  |||||||| | || ||||||||||||    
T  14391623 tattttaaacttcttaacatgtgcaaatttggacatcatagaaaaatcc 14391575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 16445801 - 16445737
Alignment:
Q  135 agttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||| |||||||| ||  ||||||||||||||||| |||  |||||||||| || |||||||||    
T  16445801 agttccaatacaaaatttctattttaaacttcttaatatgtgcaaatttgcacataatagaaaaa 16445737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 34107214 - 34107170
Alignment:
Q  156 ttttaaacttcttaacatgaacaaatttgcatatgatagaaaaat 200  Q
    ||||||||||||||||||    |||||||||||||||||||||||    
T  34107214 ttttaaacttcttaacatatgtaaatttgcatatgatagaaaaat 34107170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 36967129 - 36967077
Alignment:
Q  141 aatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgata 193  Q
    |||||||| ||  |||||||||||||||||||||  |||||||||| ||||||    
T  36967129 aatacaaagtttctattttaaacttcttaacatgtgcaaatttgcacatgata 36967077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 40226028 - 40225988
Alignment:
Q  159 taaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||  |||||||||| ||||||||||||    
T  40226028 taaacttcttaacatgtgcaaatttgcacatgatagaaaaa 40225988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 6e-17; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 8165756 - 8165829
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    |||||||| |||||||| ||  |||||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  8165756 acaagttccaatacaaaatttatattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaatccatt 8165829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 42180162 - 42180232
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatcc 202  Q
    |||||||| |||||||| || ||||||||||||||||||||||  ||||||| || |||||||||||||||    
T  42180162 acaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaatttacacatgatagaaaaatcc 42180232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 1569258 - 1569191
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||| ||||||||||||||||||||||||| || |||||  | ||||||||||||    
T  1569258 acaagttccaatacaaagttattattttaaacttcttaacatgtacgaatttatacatgatagaaaaa 1569191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 3861504 - 3861571
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||  |||||||| |||||||||| ||||    
T  3861504 gcacaagttctaaaacaaac--attattttaaacttcttaacatatacaaatttacatatgataggaaaa 3861571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 23803114 - 23803049
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaa 197  Q
    |||||||| ||| |||| ||  |||||||||||||||||||||  |||||||||||||||||||||    
T  23803114 acaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcatatgatagaaa 23803049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 40497155 - 40497230
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    |||||||||||||   ||| ||| || ||||||||||||| ||||  |||||||||| ||||||||||||||||||    
T  40497155 gcacaagttctaagttaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaatccatt 40497230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 50204517 - 50204580
Alignment:
Q  136 gttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||| |||||||| ||  |||||||||||||||||||||  |||||||||| ||||||||||||    
T  50204517 gttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 50204580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 2571379 - 2571445
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  2571379 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 2571445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 10307877 - 10307943
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  10307877 caagttccaatgcaaatttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 10307943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 54527774 - 54527704
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatcc 202  Q
    |||||||| |||||||| ||  ||||||||| |||||||||||  |||||||||| || ||||||||||||    
T  54527774 acaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaatttgcacataatagaaaaatcc 54527704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 40930183 - 40930228
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||    
T  40930183 tattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 40930228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 46845187 - 46845138
Alignment:
Q  156 ttttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||| ||||    
T  46845187 ttttgaacttcttaacatgtacaaatttgcacatgatagaaaaattcatt 46845138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 37055435 - 37055364
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatcc 202  Q
    |||||||||  ||||||  ||| ||||||||||||||||| |||  ||||||| || |||||||||||||||    
T  37055435 cacaagttccgatacaactttactattttaaacttcttaatatgtgcaaattttcacatgatagaaaaatcc 37055364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 51401550 - 51401617
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||| ||  |||||||||||||||||||||  |||||||| | || |||||||||    
T  51401550 acaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgtacataatagaaaaa 51401617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 51618157 - 51618224
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| ||| |||| |||  |||| |||||||||||||||  |||||||||| ||||||||||||    
T  51618157 acaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 51618224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 3863464 - 3863506
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  3863464 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 3863506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 23523081 - 23523123
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  23523081 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 23523123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 38389582 - 38389624
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  38389582 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 38389624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 15269206 - 15269161
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  15269206 tattataaacttcttaacatgtgcaaatttacatatgatagaaaaa 15269161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 29686429 - 29686502
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||||||||   ||| ||| || ||||||||||||| ||||  |||||||||| |||||||||||| ||||    
T  29686429 cacaagttctaagttaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacccat 29686502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 174
Target Start/End: Original strand, 7220265 - 7220293
Alignment:
Q  146 aaacttattattttaaacttcttaacatg 174  Q
    |||||||||||||||||||||||||||||    
T  7220265 aaacttattattttaaacttcttaacatg 7220293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 20938166 - 20938234
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||  |||| ||| || ||||||||||||| ||||  |||||||||| ||||||||||||    
T  20938166 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 20938234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 25633119 - 25633175
Alignment:
Q  143 tacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||| ||| |||||| |||||||||||| |  |||||||||| ||||||||||||    
T  25633119 tacaaatttactattttgaacttcttaacaagttcaaatttgcacatgatagaaaaa 25633175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 33474514 - 33474474
Alignment:
Q  159 taaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||  |||||||||| ||||||||||||    
T  33474514 taaacttcttaacatgtgcaaatttgcacatgatagaaaaa 33474474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 33885596 - 33885552
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatg 174  Q
    ||||||||||||||||||| ||| |||||||||||| || |||||    
T  33885596 gcacaagttctaatacaaatttactattttaaacttttttacatg 33885552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 9e-16; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 25709467 - 25709400
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||| ||| |||||||||||||||||||||  |||||||||| ||||||||||||    
T  25709467 acaagttccaatacaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 25709400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 33343099 - 33343171
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    ||||||| |||||||| ||| ||||||||| |||||||||||  |||||||||| |||||||||||| |||||    
T  33343099 caagttccaatacaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccatt 33343171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 4969883 - 4969950
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||| ||  |||||||||||||||||||||  |||||||||| ||||||||||||    
T  4969883 acaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 4969950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 29692607 - 29692541
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||| |||||| || ||  ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  29692607 caagttttaataccaaatttctattttaaacttcttaacatgtacaaatttgcacatgatagaaaaa 29692541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 34270372 - 34270445
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccattg 206  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| |||||||||||| ||||||    
T  34270372 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccattg 34270445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 820588 - 820536
Alignment:
Q  153 ttattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||| |||||    
T  820588 ttattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccatt 820536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 24463010 - 24462958
Alignment:
Q  145 caaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaa 197  Q
    |||| |||||||||||||||||||||||||  |||||||||| ||||||||||    
T  24463010 caaagttattattttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24462958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 44473579 - 44473511
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatc 201  Q
    ||||||| |||||||| ||  |||||||||||||||||||||  |||||||||| |||||| |||||||    
T  44473579 caagttcaaatacaaaatttctattttaaacttcttaacatgttcaaatttgcacatgataaaaaaatc 44473511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 29398202 - 29398135
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||| ||  |||||||||||||||||||||  |||||||| | ||||||||||||    
T  29398202 acaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgaacatgatagaaaaa 29398135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 33072104 - 33072163
Alignment:
Q  145 caaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    |||| ||| ||||||||| ||||||||||| ||||||||||| |||||||||||| ||||    
T  33072104 caaagttactattttaaatttcttaacatgtacaaatttgcacatgatagaaaaacccat 33072163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 45501569 - 45501636
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||| ||  ||||||||||||||||| |||  |||||||||| ||||||||||||    
T  45501569 acaagttccaatacaaaatttctattttaaacttcttaagatgtgcaaatttgcacatgatagaaaaa 45501636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 5833463 - 5833537
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||||||||| || || ||| |  ||||||||| ||||||||  |||||||||| |||||||||||||||||    
T  5833463 gcacaagttctaagacgaagttactgctttaaactttttaacatgtgcaaatttgcacatgatagaaaaatccat 5833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 26037203 - 26037269
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    |||||||| |||||||| ||  ||||||||||||||||||||   |||||||||| |||||||||||    
T  26037203 acaagttccaatacaaaatttctattttaaacttcttaacatctgcaaatttgcacatgatagaaaa 26037269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 39757156 - 39757106
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    |||||||||||||||||||||  |||||||||| |||||||||||| ||||    
T  39757156 tattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccat 39757106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 46290121 - 46290187
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  46290121 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 46290187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 18102285 - 18102232
Alignment:
Q  145 caaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    |||| |||||| ||||||||||||||||||  |||||||||| |||||||||||    
T  18102285 caaagttattaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 18102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 46569814 - 46569878
Alignment:
Q  134 aagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||| |||| |||||||| ||||| ||||||| |||||||| ||||||| ||||||||||||||    
T  46569814 aagttcaaataaaaacttatgattttgaacttct-aacatgaaaaaatttgtatatgatagaaaaa 46569878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 3561921 - 3561874
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||||||||||||||  |||||||||| |||||||||||| ||||    
T  3561921 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccat 3561874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 7899554 - 7899487
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||||||||  |||||||| || ||||||||  |||||||||| ||||||||||||    
T  7899554 acaagttataagacaaacttaccattttaaattttttaacatgtgcaaatttgcacatgatagaaaaa 7899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 8091367 - 8091313
Alignment:
Q  145 caaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||| ||| |||||||||||||||||||||   ||||||||| ||||||||||||    
T  8091367 caaagttactattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 8091313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 9332096 - 9332138
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  9332096 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 9332138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 22334064 - 22334022
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||    
T  22334064 tttaaacttcttaacatgtacaaatttgcacatgattgaaaaa 22334022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 48445199 - 48445241
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||    
T  48445199 tttaaactttttaatatgaataaatttgcatatgatagaaaaa 48445241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 2443963 - 2443906
Alignment:
Q  141 aatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    |||||||| ||  |||||||||||||||||||||   ||||||| |||||||||||||    
T  2443963 aatacaaaatttctattttaaacttcttaacatgtgtaaatttgaatatgatagaaaa 2443906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 7170110 - 7170179
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| ||  |||| ||| || ||||||||||||| ||||  |||||||||| ||||||||||||    
T  7170110 gcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 7170179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 42750418 - 42750459
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    |||||||||||||||||   ||||||||||||||||||||||    
T  42750418 tttaaacttcttaacatatgcaaatttgcatatgatagaaaa 42750459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 7040321 - 7040253
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||  ||||| || || ||||||||||||||||||  |||||||||| |||||| |||||    
T  7040321 cacaagttccaaatcaaacatagtactttaaacttcttaacatgtgcaaatttgcacatgatataaaaa 7040253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 19889449 - 19889517
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||  |||| ||| || ||||||||||||| ||||  |||||||||| ||||||||||||    
T  19889449 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 19889517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 26050506 - 26050462
Alignment:
Q  155 attttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||||||  |||||||||| ||||||||||||    
T  26050506 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 26050462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 26059865 - 26059821
Alignment:
Q  155 attttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||||||  |||||||||| ||||||||||||    
T  26059865 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 26059821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 28323247 - 28323311
Alignment:
Q  134 aagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    ||||||||||| ||| ||||||||||||| || ||||||||   |||||| || |||||||||||    
T  28323247 aagttctaatataaaattattattttaaattttttaacatgtgtaaatttacacatgatagaaaa 28323311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 41676630 - 41676561
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||||||||| |||||||||| || |||||||||||  |||||||||| ||||||||||||    
T  41676630 gcacaagttttaatacaaaattattattttgaatttcttaacatgtgcaaatttgcacatgatagaaaaa 41676561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 25465266 - 25465335
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| ||| |||| ||| |||||| ||||||||||||||  |||||||||| ||||||||||||    
T  25465266 gcacaagttccaatgcaaatttactattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaa 25465335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 5875261 - 5875213
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatcc 202  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||||    
T  5875261 tattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaatcc 5875213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 32543120 - 32543052
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    |||||| |||||||||||||||| ||  || ||||||||||||||  ||||||||||||||||| ||||    
T  32543120 gcacaaattctaatacaaacttactaacttgaacttcttaacatgtgcaaatttgcatatgatataaaa 32543052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 6180296 - 6180363
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||| ||| ||  |||||||||||||||||||||  |||||||||| ||||||||||||    
T  6180296 acaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 6180363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 36490889 - 36490956
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| ||| |||| ||| |||||||||||||||||||||  |||||||||  ||||||||||||    
T  36490889 acaagttccaatgcaaagttactattttaaacttcttaacatgtgcaaatttgctcatgatagaaaaa 36490956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 34802100 - 34802150
Alignment:
Q  155 attttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    ||||||||||||||||||||  |||||||||| |||||||||||| |||||    
T  34802100 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccatt 34802150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 35512836 - 35512902
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| |||| ||| ||  |||||||||||||||||||||  |||||||||| ||||||||||||    
T  35512836 caagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 35512902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 3611883 - 3611928
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||| |||||||| |||||||| |||||||||||||||    
T  3611883 tattttaaactttttaacatgtacaaattttcatatgatagaaaaa 3611928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 32201737 - 32201802
Alignment:
Q  135 agttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaat 200  Q
    ||||| ||| |||| ||||||||||||||||||||| |||  |||||||||| || ||||||||||    
T  32201737 agttccaatgcaaatttattattttaaacttcttaatatgtgcaaatttgcacataatagaaaaat 32201802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 43317575 - 43317640
Alignment:
Q  134 aagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||| |||||||| ||||||||||||||||||||   ||||||| | ||||| ||||||    
T  43317575 aagttctaatataaacttataattttaaacttcttaacatgtgtaaatttgtacatgattgaaaaa 43317640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 313884 - 313932
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    ||||||||||||||||||  |||||||||| |||||||||||| |||||    
T  313884 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccatt 313932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 6307611 - 6307679
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||  ||||| ||||| ||||||||||||||||||  |||||||||| |||||| |||||    
T  6307611 cacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatttgcacatgatataaaaa 6307679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 13321986 - 13322053
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||| ||| |||||||| ||  ||||||||||||||||||||   |||||||||| ||||||||||||    
T  13321986 acaaattccaatacaaaatttctattttaaacttcttaacatatgcaaatttgcacatgatagaaaaa 13322053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 22167445 - 22167512
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||| ||  |||||||||||||||| ||||  |||||||||| ||||||| ||||    
T  22167445 acaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgataggaaaa 22167512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 23591808 - 23591875
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| ||| |||| || |||||| ||| |||||||||||  |||||||||| ||||||||||||    
T  23591808 acaagttccaatgcaaagttgttatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 23591875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 25532343 - 25532386
Alignment:
Q  156 ttttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| ||||||||  |||||||||||||||||||||||    
T  25532343 ttttaaactttttaacatgcgcaaatttgcatatgatagaaaaa 25532386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 51382444 - 51382491
Alignment:
Q  152 attattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||||||||  |||| ||||| ||||||||||||    
T  51382444 attattttaaacttcttaacatgtgcaaagttgcacatgatagaaaaa 51382491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 1502775 - 1502721
Alignment:
Q  145 caaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  1502775 caaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 1502721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 6570028 - 6569986
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  6570028 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 6569986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 23576469 - 23576415
Alignment:
Q  145 caaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  23576469 caaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 23576415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 30172014 - 30172056
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  30172014 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 30172056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 30187555 - 30187597
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  30187555 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 30187597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 38812872 - 38812922
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    |||||| ||||||||||||||  |||||||||| |||||||||||| ||||    
T  38812872 tattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaacccat 38812922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 39310845 - 39310787
Alignment:
Q  141 aatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| ||  |||||||||||| ||||||||  |||||||||| ||||||||||||    
T  39310845 aatacaaaatttctattttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 39310787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 47355446 - 47355404
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatg 174  Q
    |||||||| |||||||| ||||||||||||| |||||||||||    
T  47355446 acaagttccaatacaaatttattattttaaatttcttaacatg 47355404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 6754579 - 6754648
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| ||  |||| ||| || ||||||||||||| ||||  |||||||||| ||||||||||||    
T  6754579 gcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 6754648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 35438839 - 35438892
Alignment:
Q  146 aaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||  |||||||| |||||||||||  |||||||||| ||||||||||||    
T  35438839 aaacttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 35438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 9516690 - 9516758
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| ||| | |||||||  |||||||| |||||||||||  ||||||| || ||||||||||||    
T  9516690 cacaagttataagagaaacttaccattttaaatttcttaacatgtgcaaatttacacatgatagaaaaa 9516758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 11013395 - 11013447
Alignment:
Q  147 aacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| ||| |||||||||||||||  ||||||| |||| ||||||||||    
T  11013395 aacttattttttaaaacttcttaacatgtgcaaatttacatacgatagaaaaa 11013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 34692464 - 34692536
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    |||||||| |||||||| ||  |||||||||||||||||||||  |||||||||| |||||||||||| ||||    
T  34692464 acaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccat 34692536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 8467790 - 8467830
Alignment:
Q  159 taaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  8467790 taaacttcttaacatgtacaaatttgcatatgatagaaaaa 8467830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 14228193 - 14228122
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| |||||||||||| ||||    
T  14228193 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccat 14228122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 2830731 - 2830677
Alignment:
Q  150 ttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    |||||||||||||||||||||||||  |||||||| | |||||||||||| ||||    
T  2830731 ttattattttaaacttcttaacatgtgcaaatttgtacatgatagaaaaacccat 2830677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 17596449 - 17596523
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    |||||||||| ||  |||| ||| || ||||||||||||| |||| ||||||||||| |||||||||||| ||||    
T  17596449 gcacaagttccaaatcaaagttactactttaaacttcttatcatgtacaaatttgcacatgatagaaaaacccat 17596523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 28943836 - 28943770
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  28943836 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 28943770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 13391807 - 13391852
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||    
T  13391807 tattttaaacttcttaacatgcgcaaatttgcacatgatagaaaaa 13391852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 29863348 - 29863303
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||    
T  29863348 tattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 29863303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 31069651 - 31069578
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||||| ||  |||| ||| || ||||||||||||||||||   ||||||||| |||||||||||||||||    
T  31069651 cacaagttccaagtcaaagttactaatttaaacttcttaacatgtgtaaatttgcacatgatagaaaaatccat 31069578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 31503851 - 31503924
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||||| |||| ||||||| || |||||| |||||||||||  |||||||||| ||  |||||||||||||    
T  31503851 cacaagttccaatataaacttactactttaaatttcttaacatgtgcaaatttgcacatattagaaaaatccat 31503924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 30738123 - 30738163
Alignment:
Q  134 aagttctaatacaaacttattattttaaacttcttaacatg 174  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  30738123 aagttccaatacaaatttattattttaaacttcttaacatg 30738163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 3261188 - 3261255
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||| |||| ||  |||||||||||| ||||||||   ||||||||| ||||||||||||    
T  3261188 acaagttctaatgcaaagtttctattttaaactttttaacatgtgtaaatttgcacatgatagaaaaa 3261255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 8977536 - 8977461
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    |||||||||  |||||||| ||| |||||| |||||||||||| |  ||||||| || ||||||||||||| ||||    
T  8977536 gcacaagttacaatacaaatttactattttgaacttcttaacaagtgcaaatttacacatgatagaaaaattcatt 8977461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 10887164 - 10887206
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  10887164 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 10887206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 17552654 - 17552588
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| || | ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  17552654 caagttccaatgcataattactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 17552588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 24979196 - 24979150
Alignment:
Q  153 ttattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  24979196 ttattttaaacatcttaacatgtgcaaatttgcacatgatagaaaaa 24979150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 6016991 - 6017036
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaatcc 202  Q
    ||||||||| ||||||||  |||||||||| |||||||||||||||    
T  6016991 tttaaactttttaacatgtgcaaatttgcacatgatagaaaaatcc 6017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 20979106 - 20979146
Alignment:
Q  156 ttttaaacttcttaacatgaacaaatttgcatatgatagaa 196  Q
    |||||||||||||||||||  |||||||||| |||||||||    
T  20979106 ttttaaacttcttaacatgtgcaaatttgcacatgatagaa 20979146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 27819672 - 27819628
Alignment:
Q  155 attttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||||  |||||||| | ||||||||||||    
T  27819672 attttaaacttcttaacatgtgcaaatttgtacatgatagaaaaa 27819628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 31790961 - 31790917
Alignment:
Q  155 attttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| ||||||| |||  |||||||||||||||||||||||    
T  31790961 attttaaatttcttaatatgtgcaaatttgcatatgatagaaaaa 31790917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 3398330 - 3398397
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||| ||  |||||||||||||||||||||  |||||||||| ||||||||||||    
T  3398330 acaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 3398397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 31366019 - 31365951
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||  |||| ||| || |||||||||||||||||| ||||||||||| ||||||||||||    
T  31366019 cacaagttccaagtcaaagttactaatttaaacttcttaacatgtacaaatttgcacatgatagaaaaa 31365951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 32020053 - 32019985
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| || |||||||||  |||||||| |||||||||||  |||||||||| ||||||||||||    
T  32020053 cacaagttccaagacaaacttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 32019985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 23995484 - 23995417
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||  |||| ||| ||| ||||||||||||||||||||| ||||||||||| || |||||||||    
T  23995484 acaagtttcaatataaaattactattttaaacttcttaacatgtacaaatttgcacataatagaaaaa 23995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 15241009 - 15240951
Alignment:
Q  141 aatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| ||| |||||| ||||| |||||||| ||||||||||| ||||||||||||    
T  15241009 aatacaaatttaatattttgaactttttaacatgtacaaatttgcacatgatagaaaaa 15240951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 30839892 - 30839958
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  30839892 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 30839958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 36597690 - 36597756
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  36597690 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 36597756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 2795632 - 2795705
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||||| ||  |||| ||| || ||||||||||||||||||  |||||||||| |||||||||||| ||||    
T  2795632 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccat 2795705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 29855945 - 29855892
Alignment:
Q  152 attattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    ||||||| |||||||||||||||  ||||||| || ||||||||||||||||||    
T  29855945 attatttaaaacttcttaacatgtgcaaatttacacatgatagaaaaatccatt 29855892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 30893752 - 30893805
Alignment:
Q  145 caaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    |||| ||| |||||||||||||||||||||  |||||||||| |||||||||||    
T  30893752 caaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 30893805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 12642062 - 12641994
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||  |||| |||||| ||||||||||||||||||  |||||||||| || |||||||||    
T  12642062 cacaagttccaaatcaaagttattaatttaaacttcttaacatgtgcaaatttgcacattatagaaaaa 12641994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 25395344 - 25395388
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatg 174  Q
    ||||||||  ||||||||| |||||||||||||||||||||||||    
T  25395344 gcacaagtgttaatacaaatttattattttaaacttcttaacatg 25395388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 14466537 - 14466490
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||||||||||||||   ||||||||| |||||||||||||||||    
T  14466537 tttaaacttcttaacatgtctaaatttgcacatgatagaaaaatccat 14466490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 14695181 - 14695114
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||  ||||||||| |||||||||||||||||||  | ||||| || |||||| |||||    
T  14695181 acaagttctaatgtaaacttatttttttaaacttcttaacatgtgcgaattttcacatgatataaaaa 14695114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 4047547 - 4047589
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  4047547 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 4047589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 6863667 - 6863733
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| |||| ||| ||| ||||||||| || ||||||||  |||||||||| ||||||||||||    
T  6863667 caagttccaatataaagttactattttaaattttttaacatgtgcaaatttgcacatgatagaaaaa 6863733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 8103650 - 8103581
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| ||  |||| ||| || ||||||||||||| ||||  |||||||||| ||||||||||||    
T  8103650 gcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 8103581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 41350310 - 41350379
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| ||  |||| ||| || ||||||||||||||||||  |||||||||| |||||| |||||    
T  41350310 gcacaagttccaagtcaaaattactactttaaacttcttaacatgtgcaaatttgcacatgataaaaaaa 41350379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 34578143 - 34578191
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatcc 202  Q
    |||||||||||| ||||||||  |||||||||| |||||| ||||||||    
T  34578143 tattttaaactttttaacatgtgcaaatttgcacatgataaaaaaatcc 34578191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 18882335 - 18882268
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||||||| ||  |||||||||||||||||||||  |||||||||| ||||||||||||    
T  18882335 acaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 18882268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 55813983 - 55814042
Alignment:
Q  141 aatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaat 200  Q
    |||||||| |||||||||||||||| ||||||||  ||||||||||||||||| ||||||    
T  55813983 aatacaaaattattattttaaactttttaacatgtgcaaatttgcatatgatacaaaaat 55814042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 16667434 - 16667380
Alignment:
Q  150 ttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    |||| ||||||||||||||||||||  |||||||||| |||||||||||||||||    
T  16667434 ttatcattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaatccat 16667380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 50352413 - 50352479
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||||||||||||||||    
T  50352413 caagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcatatgatagaaaaa 50352479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 19450968 - 19450895
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    |||||||| |||||||| ||  |||||||||||||||||||||  |||||||||| || ||||||||| |||||    
T  19450968 acaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaacccatt 19450895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 52391408 - 52391477
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatc 201  Q
    |||||||| |||||||| ||  |||||||||||||||||||||  ||||||| || ||||||||||||||    
T  52391408 acaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttacacatgatagaaaaatc 52391477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 53376478 - 53376409
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||  ||||||| || |||||| |||||    
T  53376478 gcacaggttttaatacaaacttcttattttaaacttcttaacatgtgcaaattttcacatgataaaaaaa 53376409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 17409934 - 17410006
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    |||||||| |||||||| ||  |||||||||||||||| ||||  |||||||||| |||||||||||| ||||    
T  17409934 acaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacccat 17410006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 24684947 - 24685012
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaa 197  Q
    |||||||| ||| |||| ||  |||||||||||||||||||||  |||||||||| ||||||||||    
T  24684947 acaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 49181180 - 49181249
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||  |||||||| ||| |||||| |||||||||||| |  |||||||||| ||||||||||||    
T  49181180 gcacaagttacaatacaaatttactattttgaacttcttaacaggtgcaaatttgcacatgatagaaaaa 49181249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 29190885 - 29190817
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||  |||| ||| || ||||||||||||||||||  |||||||||| ||||||||||||    
T  29190885 cacaagttccaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 29190817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 34941388 - 34941460
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    |||||||| ||| |||| ||| |||||||||||||||| ||||  |||||| ||| |||||||||||| ||||    
T  34941388 acaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaattcgcacatgatagaaaaacccat 34941460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 42479962 - 42479894
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    |||||||||| || ||||| |||| || ||||| |||||||||||  |||||||||| |||||||||||    
T  42479962 gcacaagttccaagacaaatttatcatattaaatttcttaacatgtgcaaatttgcacatgatagaaaa 42479894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 19468304 - 19468371
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||  |||||||| ||  |||||||||||||||||||||  |||||||||| || |||||||||    
T  19468304 acaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaa 19468371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 23545586 - 23545653
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||| ||| |||||||| ||  |||||||||||| ||||||||  |||||||||| ||||||||||||    
T  23545586 acaatttccaatacaaaatttatattttaaacttattaacatgtgcaaatttgcacatgatagaaaaa 23545653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 30192383 - 30192442
Alignment:
Q  134 aagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgata 193  Q
    |||||||||||||||||||  ||||| |||||| ||||||  ||||||||||| ||||||    
T  30192383 aagttctaatacaaacttaccattttgaacttcgtaacatctacaaatttgcacatgata 30192442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 35999990 - 35999943
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||||||||||||||  |||||||||| |||||||||||| ||||    
T  35999990 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccat 35999943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 27362526 - 27362568
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  27362526 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 27362568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 39876941 - 39877007
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  ||||||| || ||||||||||||    
T  39876941 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttacacatgatagaaaaa 39877007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 44916710 - 44916644
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||| ||  ||||||||| || |||| |||  |||||||||| ||||||||||||    
T  44916710 caagttctaatacaaaatttctattttaaattttttaatatgtgcaaatttgcacatgatagaaaaa 44916644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 47326935 - 47326893
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  47326935 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 47326893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 47341731 - 47341689
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  47341731 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 47341689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 48910845 - 48910803
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||   |||||||||||||||||||||||    
T  48910845 tttaaacttcttaacatatgcaaatttgcatatgatagaaaaa 48910803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 49228763 - 49228837
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    ||||||||| ||  |||| ||| || |||||||||||||||| |  |||||||||| |||||||||||| |||||    
T  49228763 cacaagttccaagtcaaagttactaatttaaacttcttaacacgtgcaaatttgcacatgatagaaaaacccatt 49228837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 54495680 - 54495638
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  54495680 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 54495638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 2096979 - 2097032
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaattt 183  Q
    |||||||||| ||||||||||||  ||||| ||||||||||||||  |||||||    
T  2096979 gcacaagttccaatacaaacttaccattttgaacttcttaacatgtgcaaattt 2097032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 3085802 - 3085847
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||| |||  |||||||||| ||||||||||||    
T  3085802 tattttaaacttcttaaaatgtgcaaatttgcacatgatagaaaaa 3085847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 9971700 - 9971659
Alignment:
Q  160 aaacttcttaacatgaacaaatttgcatatgatagaaaaatc 201  Q
    ||||||||||||||| | ||||||||| ||||||||||||||    
T  9971700 aaacttcttaacatgtataaatttgcacatgatagaaaaatc 9971659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 23553705 - 23553750
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaatcc 202  Q
    ||||||||| ||||||||  |||||||||| |||||||||||||||    
T  23553705 tttaaactttttaacatgtgcaaatttgcacatgatagaaaaatcc 23553750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 25843406 - 25843471
Alignment:
Q  134 aagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||||| ||| || ||||||||| |||||||  |||||||||||  |||||||||||    
T  25843406 aagttctaagacaaagttactactttaaactttttaacatctacaaatttgcacgtgatagaaaaa 25843471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 40049670 - 40049735
Alignment:
Q  134 aagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| || |||||||||    
T  40049670 aagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcacataatagaaaaa 40049735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 4779477 - 4779437
Alignment:
Q  159 taaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||  |||||||||| ||||||||||||    
T  4779477 taaacttcttaacatgtgcaaatttgcacatgatagaaaaa 4779437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 7349797 - 7349865
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| |||  |||| ||| || ||||||||||||| |||| |||||||| || ||||||||||||    
T  7349797 cacaagttttaagtcaaagttactactttaaacttcttatcatgtacaaatttacacatgatagaaaaa 7349865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 9759197 - 9759137
Alignment:
Q  145 caaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccatt 205  Q
    |||| ||| ||||||||| |||||||||||  |||||||| | |||||||||||| |||||    
T  9759197 caaagttactattttaaatttcttaacatgtgcaaatttgtacatgatagaaaaacccatt 9759137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 51691451 - 51691523
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    |||||||| ||| |||| ||| ||||| ||| |||||||||||  ||||||| || |||||||||||| ||||    
T  51691451 acaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaatttacacatgatagaaaaacccat 51691523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 41101 - 41159
Alignment:
Q  141 aatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| ||||||||||||||||||||||||  |||||||| || ||||||||||||    
T  41101 aatacaaaattattattttaaacttcttaacatatacaaatttacacatgatagaaaaa 41159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 37184 - 37115
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| ||  |||| |||| | ||||||||||||||||||  |||||||||| ||||||||||||    
T  37184 gcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 37115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 6765108 - 6765178
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaat 200  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||  ||||| | || |||||||||||||    
T  6765108 gcacaagttataatacaaatttatttttttaaacttcttaacatgtgcaaatctacacatgatagaaaaat 6765178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 20566086 - 20566018
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||||||||| || || ||||||||||||||||||   ||||||||| ||||||||||||    
T  20566086 cacaagttccaatacaaacataatactttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 20566018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 9747427 - 9747494
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| || ||||| ||| |||||||||||||||||||||   ||||||||| ||||||||||||    
T  9747427 acaagttccaagacaaaattactattttaaacttcttaacatgtgaaaatttgcacatgatagaaaaa 9747494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 9895131 - 9895189
Alignment:
Q  141 aatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||| ||| ||||||||||||||||||||||||    ||||||||||||||||||||||    
T  9895131 aatataaatttattattttaaacttcttaacatttgaaaatttgcatatgatagaaaaa 9895189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 8065255 - 8065300
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||    
T  8065255 tattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 8065300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 26003405 - 26003348
Alignment:
Q  141 aatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    |||||||| ||  |||||||||||||||||||||  |||||||||| |||||||||||    
T  26003405 aatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 26003348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 19228534 - 19228601
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    ||||||||| ||  |||| ||| || ||||||||||||||||||  |||||||||| |||||||||||    
T  19228534 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 19228601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 24729645 - 24729578
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||| ||| ||| |||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  24729645 acaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 24729578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 29157897 - 29157830
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||| ||| |||| ||| ||||| ||| |||||||||||  |||||||||| ||||||||||||    
T  29157897 acaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 29157830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 36612799 - 36612756
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatga 175  Q
    ||||||| ||||||||| || |||||||||||||||||||||||    
T  36612799 acaagttttaatacaaaatttttattttaaacttcttaacatga 36612756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 36620650 - 36620607
Alignment:
Q  132 acaagttctaatacaaacttattattttaaacttcttaacatga 175  Q
    ||||||| ||||||||| || |||||||||||||||||||||||    
T  36620650 acaagttttaatacaaaatttttattttaaacttcttaacatga 36620607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 5583625 - 5583559
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||  |||||||||  ||||||||||||    
T  5583625 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcgcatgatagaaaaa 5583559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 6109524 - 6109566
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  6109524 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 6109566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 7757853 - 7757787
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| ||| |||| ||| ||||||||| |||||||||||   ||||||||| ||||||||||||    
T  7757853 caagttccaatgcaaagttactattttaaatttcttaacatgtgtaaatttgcacatgatagaaaaa 7757787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 15411678 - 15411624
Alignment:
Q  144 acaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    ||||| ||| |||||||||||||||||||||  |||||||||| ||| |||||||    
T  15411678 acaaagttactattttaaacttcttaacatgtgcaaatttgcacatgttagaaaa 15411624  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 16126602 - 16126560
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  16126602 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 16126560  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 38248487 - 38248421
Alignment:
Q  133 caagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||| |||  ||| ||| ||||||||| |||||||||||  |||||||||| ||||||||||||    
T  38248487 caagttccaatgtaaaattactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 38248421  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 14377559 - 14377600
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaa 198  Q
    ||||||||||||| |||| ||||||||||| |||||||||||    
T  14377559 tttaaacttcttatcatgtacaaatttgcacatgatagaaaa 14377600  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 16123413 - 16123458
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaatcc 202  Q
    ||||||||||||| ||||  |||||||||| |||||||||||||||    
T  16123413 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaatcc 16123458  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 23932673 - 23932742
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||  ||||||  ||| ||||||||||||||||| ||   |||||||||| ||||||||||||    
T  23932673 gcacaagttccgatacaattttactattttaaacttcttaatatatgcaaatttgcacatgatagaaaaa 23932742  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 39607467 - 39607434
Alignment:
Q  141 aatacaaacttattattttaaacttcttaacatg 174  Q
    |||||||||||||||||||||| |||||||||||    
T  39607467 aatacaaacttattattttaaatttcttaacatg 39607434  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 43388551 - 43388482
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| ||| ||||| ||   |||| ||||||||||||||  |||||||||| ||||||||||||    
T  43388551 gcacaagttccaatgcaaacatacctttttgaacttcttaacatgtgcaaatttgcacatgatagaaaaa 43388482  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 45062306 - 45062375
Alignment:
Q  130 gcacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||| || | ||| ||| |||||| |||||||||| |||  |||||||||| ||||||||||||    
T  45062306 gcacaagttccaaaataaagttactattttgaacttcttaatatgtgcaaatttgcacatgatagaaaaa 45062375  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 5853504 - 5853464
Alignment:
Q  159 taaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||  |||||||||| ||||||||||||    
T  5853504 taaacttcttaacatgtgcaaatttgcacatgatagaaaaa 5853464  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 9450366 - 9450434
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||| ||| ||||||||| || || |||||| |||||||||||  || ||||||| ||||||||||||    
T  9450366 cacaaattccaatacaaacatactactttaaatttcttaacatgtgcagatttgcacatgatagaaaaa 9450434  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 16493573 - 16493533
Alignment:
Q  159 taaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||||||||||  |||||||||| ||||||||||||    
T  16493573 taaacttcttaacatgtgcaaatttgcacatgatagaaaaa 16493533  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 27665113 - 27665045
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||  |||| ||| || ||||||||||||| ||||  |||||||||| ||||||||||||    
T  27665113 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 27665045  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 36731289 - 36731357
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||| ||||| |||  |||||||| |||||||||||   |||||| || ||||||||||||    
T  36731289 cacaagttctaagacaaatttaccattttaaatttcttaacatgtgtaaatttacacatgatagaaaaa 36731357  T

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Target: scaffold0061 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 52848 - 52775
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||||| ||  |||| ||| || ||||||||||||||||||  |||||||||| |||||||||||| ||||    
T  52848 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccat 52775  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 145786 - 145859
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaatccat 204  Q
    ||||||||| ||  |||| ||| || ||||||||||||||||||  |||||||||| |||||||||||| ||||    
T  145786 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccat 145859  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 13217 - 13262
Alignment:
Q  154 tattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||    
T  13217 tattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 13262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 16604 - 16536
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||| ||  ||||| ||||| ||||||||||||||||||  |||||||||| |||||| |||||    
T  16604 cacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatttgcacatgatataaaaa 16536  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 182177 - 182219
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    |||||||||||||||||| |||||||| || ||||||||||||    
T  182177 tttaaacttcttaacatgtacaaatttacacatgatagaaaaa 182219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 5826 - 5871
Alignment:
Q  157 tttaaacttcttaacatgaacaaatttgcatatgatagaaaaatcc 202  Q
    ||||||||| ||||||||  |||||||||| |||||||||||||||    
T  5826 tttaaactttttaacatgtgcaaatttgcacatgatagaaaaatcc 5871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 13632 - 13564
Alignment:
Q  131 cacaagttctaatacaaacttattattttaaacttcttaacatgaacaaatttgcatatgatagaaaaa 199  Q
    ||||||||  ||| |||||||| || ||||||||||||||||||  |||||||||| ||  ||||||||    
T  13632 cacaagtttcaatgcaaacttactaatttaaacttcttaacatgtgcaaatttgcacatattagaaaaa 13564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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