View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18699_high_14 (Length: 269)

Name: NF18699_high_14
Description: NF18699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18699_high_14
NF18699_high_14
[»] chr3 (52 HSPs)
chr3 (68-269)||(42921295-42921498)
chr3 (8-167)||(47738214-47738380)
chr3 (8-172)||(22426137-22426300)
chr3 (13-167)||(19650697-19650850)
chr3 (8-169)||(33145821-33145982)
chr3 (8-167)||(2754826-2754987)
chr3 (8-167)||(3137211-3137370)
chr3 (23-167)||(30385525-30385668)
chr3 (28-172)||(36864824-36864967)
chr3 (8-167)||(3089526-3089687)
chr3 (8-167)||(3574323-3574482)
chr3 (8-167)||(37522162-37522321)
chr3 (8-167)||(6041993-6042145)
chr3 (8-172)||(33113902-33114067)
chr3 (68-167)||(26612916-26613015)
chr3 (8-167)||(3456173-3456332)
chr3 (68-157)||(33839705-33839794)
chr3 (71-167)||(40328004-40328100)
chr3 (8-167)||(37216850-37217009)
chr3 (8-167)||(8320379-8320540)
chr3 (68-167)||(34482685-34482783)
chr3 (8-167)||(24343656-24343818)
chr3 (78-167)||(8361836-8361924)
chr3 (78-167)||(9796826-9796914)
chr3 (8-167)||(48161014-48161174)
chr3 (78-167)||(41224414-41224502)
chr3 (76-167)||(46919072-46919163)
chr3 (8-126)||(42297973-42298090)
chr3 (8-96)||(42297463-42297549)
chr3 (8-58)||(30385120-30385170)
chr3 (92-157)||(3574515-3574580)
chr3 (92-157)||(2754729-2754794)
chr3 (92-157)||(3456076-3456141)
chr3 (92-157)||(11347280-11347345)
chr3 (100-157)||(37217049-37217106)
chr3 (13-154)||(41883031-41883174)
chr3 (92-157)||(48160917-48160982)
chr3 (8-50)||(34482824-34482866)
chr3 (8-58)||(40327934-40327984)
chr3 (92-157)||(3137402-3137467)
chr3 (92-157)||(6041896-6041961)
chr3 (100-157)||(8320580-8320637)
chr3 (92-157)||(9797017-9797082)
chr3 (92-157)||(19650888-19650953)
chr3 (92-157)||(22426332-22426397)
chr3 (115-157)||(42297365-42297407)
chr3 (115-157)||(42921155-42921197)
chr3 (92-157)||(33145725-33145789)
chr3 (100-157)||(37522065-37522122)
chr3 (29-58)||(41224363-41224392)
chr3 (112-157)||(47738117-47738162)
chr3 (100-156)||(30385024-30385080)
[»] chr8 (61 HSPs)
chr8 (8-172)||(34665491-34665654)
chr8 (8-170)||(20091595-20091757)
chr8 (8-167)||(3596838-3596997)
chr8 (8-167)||(26041910-26042069)
chr8 (8-167)||(37985853-37986011)
chr8 (8-167)||(17841647-17841806)
chr8 (8-167)||(6108030-6108189)
chr8 (8-167)||(25581036-25581195)
chr8 (8-167)||(40779926-40780085)
chr8 (69-173)||(37132471-37132575)
chr8 (8-167)||(15187669-15187828)
chr8 (8-167)||(42754839-42754998)
chr8 (13-172)||(1645756-1645916)
chr8 (8-167)||(32064854-32065014)
chr8 (13-170)||(38017048-38017204)
chr8 (8-167)||(30055626-30055784)
chr8 (68-169)||(24211167-24211267)
chr8 (68-167)||(10044518-10044616)
chr8 (68-167)||(14129029-14129127)
chr8 (8-167)||(24844657-24844815)
chr8 (30-167)||(30834852-30834989)
chr8 (80-172)||(31347568-31347659)
chr8 (76-167)||(1503640-1503730)
chr8 (8-157)||(35353150-35353299)
chr8 (13-126)||(8453948-8454061)
chr8 (8-157)||(32393967-32394114)
chr8 (72-166)||(3890412-3890506)
chr8 (68-141)||(41819590-41819663)
chr8 (8-158)||(39772608-39772757)
chr8 (78-172)||(7022159-7022252)
chr8 (78-167)||(7017655-7017743)
chr8 (8-58)||(24211459-24211509)
chr8 (92-165)||(42755030-42755103)
chr8 (92-157)||(1645953-1646018)
chr8 (112-157)||(1886627-1886672)
chr8 (92-157)||(14128876-14128941)
chr8 (92-157)||(27782105-27782170)
chr8 (92-157)||(32064757-32064822)
chr8 (100-157)||(32393870-32393927)
chr8 (92-157)||(34665394-34665459)
chr8 (92-157)||(35353053-35353118)
chr8 (92-157)||(37986043-37986108)
chr8 (92-157)||(41819766-41819831)
chr8 (8-58)||(41819684-41819734)
chr8 (92-157)||(6108221-6108286)
chr8 (92-157)||(17841838-17841903)
chr8 (92-157)||(20091789-20091854)
chr8 (8-123)||(27835293-27835409)
chr8 (92-157)||(31347770-31347835)
chr8 (100-157)||(38016983-38017040)
chr8 (92-157)||(40780117-40780182)
chr8 (28-58)||(7017771-7017801)
chr8 (28-58)||(7022107-7022137)
chr8 (103-145)||(37132657-37132699)
chr8 (92-157)||(8453846-8453911)
chr8 (92-157)||(15187572-15187637)
chr8 (92-141)||(15972865-15972914)
chr8 (100-157)||(24211549-24211606)
chr8 (92-157)||(26042104-26042169)
chr8 (92-157)||(39772789-39772854)
chr8 (92-172)||(24844847-24844926)
[»] chr4 (53 HSPs)
chr4 (8-167)||(36073459-36073617)
chr4 (8-169)||(9088979-9089140)
chr4 (8-167)||(21802117-21802278)
chr4 (8-172)||(22199370-22199532)
chr4 (8-171)||(24128348-24128511)
chr4 (8-167)||(44893010-44893169)
chr4 (8-167)||(44893535-44893694)
chr4 (8-167)||(46441953-46442112)
chr4 (8-172)||(47290175-47290339)
chr4 (8-167)||(7744909-7745068)
chr4 (68-173)||(37219801-37219906)
chr4 (8-167)||(53123140-53123299)
chr4 (8-169)||(17655539-17655701)
chr4 (13-159)||(23964269-23964416)
chr4 (8-167)||(50156376-50156534)
chr4 (13-167)||(2624951-2625105)
chr4 (8-167)||(10442584-10442745)
chr4 (8-167)||(4751555-4751715)
chr4 (8-141)||(30563318-30563452)
chr4 (8-167)||(49387684-49387844)
chr4 (8-167)||(31078616-31078775)
chr4 (78-172)||(24392854-24392947)
chr4 (8-167)||(36073056-36073219)
chr4 (71-167)||(11314048-11314144)
chr4 (70-167)||(42671840-42671937)
chr4 (8-167)||(37934738-37934897)
chr4 (68-167)||(33530481-33530579)
chr4 (114-167)||(25063371-25063424)
chr4 (76-167)||(36073258-36073349)
chr4 (92-157)||(7745100-7745165)
chr4 (92-157)||(33530676-33530741)
chr4 (92-157)||(10442777-10442842)
chr4 (92-157)||(23964453-23964518)
chr4 (92-157)||(31078807-31078872)
chr4 (92-157)||(42671681-42671746)
chr4 (73-167)||(44744607-44744697)
chr4 (92-157)||(49387876-49387941)
chr4 (102-156)||(36073741-36073795)
chr4 (92-157)||(2624849-2624914)
chr4 (92-157)||(21802310-21802375)
chr4 (92-157)||(22199273-22199338)
chr4 (100-157)||(24392679-24392736)
chr4 (92-157)||(36072959-36073024)
chr4 (92-157)||(47290078-47290143)
chr4 (92-157)||(50156566-50156631)
chr4 (128-160)||(53998988-53999020)
chr4 (92-157)||(4751458-4751523)
chr4 (92-157)||(24128251-24128316)
chr4 (8-57)||(33530596-33530644)
chr4 (100-157)||(36073362-36073419)
chr4 (8-57)||(36073650-36073699)
chr4 (92-157)||(44893438-44893503)
chr4 (92-157)||(46441856-46441921)
[»] chr5 (35 HSPs)
chr5 (8-167)||(6043309-6043467)
chr5 (8-167)||(14138777-14138935)
chr5 (8-167)||(4892311-4892470)
chr5 (8-167)||(33584126-33584285)
chr5 (28-167)||(3521804-3521942)
chr5 (8-167)||(8145484-8145641)
chr5 (8-172)||(25398347-25398511)
chr5 (68-167)||(12614534-12614633)
chr5 (8-166)||(12850910-12851069)
chr5 (13-167)||(2477750-2477904)
chr5 (8-167)||(3362887-3363047)
chr5 (8-167)||(37321590-37321749)
chr5 (78-167)||(22912854-22912942)
chr5 (8-167)||(38899522-38899682)
chr5 (8-148)||(11360947-11361087)
chr5 (8-127)||(4433844-4433963)
chr5 (78-167)||(17545479-17545567)
chr5 (8-141)||(31640763-31640896)
chr5 (92-157)||(2477648-2477713)
chr5 (92-157)||(11361119-11361184)
chr5 (136-178)||(12614480-12614522)
chr5 (92-157)||(4892214-4892279)
chr5 (92-157)||(8145387-8145452)
chr5 (92-157)||(12614721-12614786)
chr5 (92-157)||(22913042-22913107)
chr5 (92-157)||(25398250-25398315)
chr5 (29-152)||(27481952-27482077)
chr5 (92-157)||(6043499-6043564)
chr5 (100-157)||(33584325-33584382)
chr5 (101-157)||(10458409-10458465)
chr5 (100-152)||(37321789-37321841)
chr5 (92-157)||(3362790-3362855)
chr5 (100-157)||(14138680-14138737)
chr5 (92-141)||(31640928-31640977)
chr5 (92-157)||(38899714-38899779)
[»] chr6 (33 HSPs)
chr6 (8-167)||(33696805-33696965)
chr6 (13-167)||(28675262-28675416)
chr6 (8-167)||(17175818-17175977)
chr6 (8-167)||(2309220-2309379)
chr6 (8-172)||(17705261-17705421)
chr6 (8-167)||(18365371-18365529)
chr6 (8-167)||(18370635-18370793)
chr6 (8-167)||(33695123-33695283)
chr6 (68-167)||(29693615-29693714)
chr6 (8-158)||(6031546-6031697)
chr6 (78-171)||(11548382-11548474)
chr6 (13-141)||(18889466-18889594)
chr6 (8-167)||(23290878-23291040)
chr6 (28-167)||(32702334-32702473)
chr6 (8-134)||(8515556-8515682)
chr6 (8-98)||(9752111-9752201)
chr6 (92-157)||(6127287-6127352)
chr6 (92-157)||(23291072-23291137)
chr6 (102-167)||(34238884-34238948)
chr6 (31-126)||(6127408-6127505)
chr6 (102-157)||(8515723-8515778)
chr6 (90-167)||(582524-582602)
chr6 (8-58)||(25987039-25987089)
chr6 (8-58)||(29693547-29693597)
chr6 (92-157)||(17705453-17705518)
chr6 (92-157)||(33695315-33695380)
chr6 (92-157)||(33696708-33696773)
chr6 (114-167)||(2121006-2121059)
chr6 (92-157)||(11548576-11548641)
chr6 (92-157)||(17176009-17176074)
chr6 (100-157)||(18365569-18365626)
chr6 (100-157)||(18370833-18370890)
chr6 (92-157)||(28675160-28675225)
[»] scaffold0085 (2 HSPs)
scaffold0085 (8-167)||(47959-48117)
scaffold0085 (92-156)||(47863-47927)
[»] chr7 (41 HSPs)
chr7 (8-167)||(24395081-24395239)
chr7 (8-167)||(3962088-3962246)
chr7 (8-167)||(45637821-45637979)
chr7 (8-167)||(4974532-4974691)
chr7 (8-167)||(42611920-42612079)
chr7 (68-160)||(29737314-29737406)
chr7 (8-167)||(48880724-48880883)
chr7 (8-169)||(20009893-20010054)
chr7 (13-167)||(42696197-42696352)
chr7 (78-167)||(37476877-37476965)
chr7 (68-167)||(34483008-34483106)
chr7 (8-167)||(30848678-30848837)
chr7 (78-173)||(18037157-18037251)
chr7 (68-167)||(35876414-35876512)
chr7 (15-172)||(15577639-15577799)
chr7 (68-172)||(15329444-15329547)
chr7 (68-167)||(35445567-35445665)
chr7 (78-167)||(15238564-15238652)
chr7 (84-167)||(25167653-25167735)
chr7 (100-165)||(18036982-18037047)
chr7 (92-157)||(4974723-4974788)
chr7 (92-157)||(34482847-34482912)
chr7 (92-157)||(42611823-42611888)
chr7 (92-157)||(45637724-45637789)
chr7 (95-157)||(15577841-15577903)
chr7 (8-58)||(25167756-25167806)
chr7 (8-58)||(29737248-29737298)
chr7 (103-157)||(37477079-37477133)
chr7 (100-157)||(3961991-3962048)
chr7 (92-157)||(15329285-15329350)
chr7 (112-157)||(24394984-24395029)
chr7 (112-157)||(36790474-36790519)
chr7 (92-157)||(48880915-48880980)
chr7 (8-55)||(35444667-35444714)
chr7 (104-167)||(36790273-36790336)
chr7 (13-55)||(15329387-15329429)
chr7 (8-58)||(34482944-34482993)
chr7 (28-58)||(37476986-37477016)
chr7 (92-157)||(25167838-25167903)
chr7 (92-157)||(29737151-29737216)
chr7 (92-157)||(35444570-35444635)
[»] chr2 (39 HSPs)
chr2 (8-167)||(9293372-9293532)
chr2 (8-167)||(23267859-23268018)
chr2 (8-167)||(33380316-33380475)
chr2 (8-167)||(35160866-35161027)
chr2 (8-166)||(31174633-31174790)
chr2 (8-167)||(10661996-10662156)
chr2 (13-167)||(9723519-9723675)
chr2 (8-167)||(7475305-7475464)
chr2 (8-165)||(3989185-3989342)
chr2 (68-172)||(22592880-22592986)
chr2 (8-172)||(13354955-13355121)
chr2 (78-167)||(43331092-43331180)
chr2 (68-140)||(16767285-16767357)
chr2 (8-141)||(21936190-21936325)
chr2 (78-169)||(21393481-21393570)
chr2 (78-148)||(37335824-37335894)
chr2 (92-157)||(10661899-10661964)
chr2 (92-157)||(14941354-14941419)
chr2 (13-58)||(27847746-27847791)
chr2 (92-157)||(35160769-35160834)
chr2 (78-126)||(34320994-34321042)
chr2 (8-58)||(40262642-40262692)
chr2 (92-157)||(9293564-9293629)
chr2 (14-126)||(14941201-14941317)
chr2 (92-172)||(31174822-31174902)
chr2 (8-58)||(16767378-16767428)
chr2 (100-157)||(9723417-9723474)
chr2 (92-157)||(21393676-21393741)
chr2 (92-157)||(21936093-21936158)
chr2 (92-157)||(23268050-23268115)
chr2 (92-157)||(33380219-33380284)
chr2 (92-157)||(43330924-43330989)
chr2 (28-58)||(21393594-21393624)
chr2 (129-167)||(27847791-27847829)
chr2 (28-58)||(43331041-43331071)
chr2 (92-141)||(3989104-3989153)
chr2 (92-157)||(13354858-13354923)
chr2 (92-157)||(27847644-27847709)
chr2 (8-56)||(22591591-22591639)
[»] chr1 (38 HSPs)
chr1 (8-172)||(51737614-51737778)
chr1 (8-167)||(40215097-40215256)
chr1 (8-167)||(19015513-19015672)
chr1 (8-167)||(25463785-25463944)
chr1 (8-167)||(44094807-44094965)
chr1 (8-172)||(41876234-41876398)
chr1 (8-167)||(6883596-6883755)
chr1 (8-167)||(36966505-36966664)
chr1 (8-167)||(37821631-37821790)
chr1 (8-172)||(20304922-20305087)
chr1 (68-167)||(18404618-18404716)
chr1 (78-173)||(33786422-33786516)
chr1 (8-167)||(3559726-3559885)
chr1 (78-167)||(32000063-32000151)
chr1 (71-172)||(44690813-44690914)
chr1 (78-170)||(40273888-40273979)
chr1 (8-167)||(27523052-27523211)
chr1 (32-167)||(25973542-25973675)
chr1 (8-167)||(9910088-9910249)
chr1 (100-166)||(33786631-33786696)
chr1 (92-167)||(19722896-19722970)
chr1 (115-167)||(52064374-52064426)
chr1 (92-157)||(16045786-16045851)
chr1 (92-157)||(25463688-25463753)
chr1 (92-157)||(40215000-40215065)
chr1 (92-165)||(40273706-40273779)
chr1 (100-172)||(3559614-3559686)
chr1 (76-172)||(10167577-10167673)
chr1 (8-58)||(44690935-44690985)
chr1 (92-157)||(18404454-18404519)
chr1 (92-157)||(44094710-44094775)
chr1 (100-155)||(27523251-27523306)
chr1 (68-131)||(52329445-52329508)
chr1 (28-58)||(32000173-32000203)
chr1 (28-58)||(40273831-40273861)
chr1 (92-157)||(9910281-9910346)
chr1 (92-157)||(32000255-32000320)
chr1 (100-157)||(41876438-41876495)
[»] scaffold0096 (2 HSPs)
scaffold0096 (8-167)||(41120-41278)
scaffold0096 (92-157)||(41023-41088)
[»] scaffold0471 (2 HSPs)
scaffold0471 (8-171)||(12951-13114)
scaffold0471 (92-157)||(12854-12919)
[»] scaffold0204 (2 HSPs)
scaffold0204 (8-167)||(4505-4664)
scaffold0204 (92-157)||(4408-4473)
[»] scaffold0178 (2 HSPs)
scaffold0178 (8-167)||(11730-11889)
scaffold0178 (92-157)||(11633-11698)
[»] scaffold0228 (6 HSPs)
scaffold0228 (8-172)||(26045-26209)
scaffold0228 (8-172)||(16093-16257)
scaffold0228 (92-157)||(8414-8479)
scaffold0228 (92-157)||(15996-16061)
scaffold0228 (92-157)||(25948-26013)
scaffold0228 (8-98)||(8511-8602)
[»] scaffold0665 (1 HSPs)
scaffold0665 (92-157)||(3080-3145)


Alignment Details
Target: chr3 (Bit Score: 154; Significance: 9e-82; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 68 - 269
Target Start/End: Original strand, 42921295 - 42921498
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T
Q  168 tctttgcatatctctcaaaacatccgatgaatattttttatttcgtcaaat-agaaagatatttttaaaatcaattgtatggaatat--aatacatatgg 264  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||  |||||||||||    
T  42921395 tctttgtatatctctcaaaacatccgatgaatattttttatttcgtcaaatcagaaagata-ttttaaaatcaattgtatggaatatagaatacatatgg 42921493  T
Q  265 ttttt 269  Q
    |||||    
T  42921494 ttttt 42921498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 47738214 - 47738380
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnat-------gaaaggttaataaatgagactgaaatctatg 100  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||         ||       ||||||||||||||||||||||||||||| |    
T  47738214 ccaataaaatctcagcctgaccagaaatcatggggtggtgggtgttatgtatttttttttattttttatgaaaggttaataaatgagactgaaatctaag 47738313  T
Q  101 ggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  47738314 gatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 22426300 - 22426137
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||| |||| ||| |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||   ||||||    
T  22426300 ccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaatgtgatt 22426201  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
     |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||||    
T  22426200 attgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccttt 22426137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 19650850 - 19650697
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgattgttgt 112  Q
    ||||||||||| || |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||  ||||||| ||||    
T  19650850 aaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 19650751  T
Q  113 gccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||||||||||  ||||||||| |||||||||||||||||||||| ||||||    
T  19650750 gtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 19650697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 33145821 - 33145982
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||| ||||||          ||||||||||||||||| ||||||||||||| |||||||    
T  33145821 ccaataaaatctcagcctgaccggaaattatgaggtggtgggtggtatgtattttttttttatgaaaggttaataaataagactgaaatctaagggtgat 33145920  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttc 169  Q
    | ||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  33145921 tattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttttc 33145982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 2754826 - 2754987
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaaggttaataaatgagactgaaatctatgggtg 104  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||            ||||||| |||||||||||||||||||| ||  ||||    
T  2754826 ccaataaaatctcagcctgaccggaaatcatggggtagtgggtgttatgtattttttttttttatgaaagattaataaatgagactgaaatttaaaggtg 2754925  T
Q  105 attgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  2754926 attattgtgccatgtcattcttaaatctttctt-ataaaatgattcttgatatctagcatttt 2754987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 3137370 - 3137211
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  3137370 ccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgat 3137271  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  3137270 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 3137211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 30385525 - 30385668
Alignment:
Q  23 cctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcat 122  Q
    |||| |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||  ||||||| ||||||||||||||    
T  30385525 cctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 30385624  T
Q  123 tcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||| |||||||||| ||||||||||||||||||| || ||||||    
T  30385625 tcttgaatctttctt-ataaaatcattcttgatatttagcatttt 30385668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 36864967 - 36864824
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattctta 127  Q
    |||||||||||||| ||||||||||||||||         |||||| |||||||||||||||||||||||| |||||||| ||||| ||||||||||||     
T  36864967 ccggaaatcatgggatggtgggtgttatgtattttttat-atgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttg 36864869  T
Q  128 aatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||    
T  36864868 aatcttttttgataaaatcattcttgatatctagcattttccttt 36864824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 3089526 - 3089687
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaaggttaataaatgagactgaaatctatgggtg 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||| ||||||            ||||||| |||||||||||||||||||||||  ||||    
T  3089526 ccaataaaatctcagcttggccggaaatcatggggtggtgggtgctatgtattatttttttttatgaaagattaataaatgagactgaaatctaaaggtg 3089625  T
Q  105 attgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  3089626 attattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcatttt 3089687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 3574482 - 3574323
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  3574482 ccaataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgat 3574383  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||| ||||||||||||  ||||||||| |||||||||||||||||||||| ||||||    
T  3574382 tattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 3574323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 37522162 - 37522321
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||||||| |||| |||||||| ||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  37522162 ccaataaaatctcaacctggccggaaattatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 37522261  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | || ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  37522262 tattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 37522321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 6041993 - 6042145
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||| |          ||||||  |||||||||||||||||||||||  |||||||    
T  6041993 ccaataaaatctcagcctgaccggaaatcatggggtggtggttgttattt------ttttatgaaaaattaataaatgagactgaaatctaaaggtgatt 6042086  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     ||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||    
T  6042087 attgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 6042145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 33113902 - 33114067
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| ||||| |||| ||| |||||||||||||||||||||||||||||||           ||||||| ||||||||||||| |||||||||  |||||    
T  33113902 ccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtga 33114001  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    || |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||||    
T  33114002 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccttt 33114067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 26612916 - 26613015
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| |||||||||| ||||||||||| |||||||||| ||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 3456173 - 3456332
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  | ||||    
T  3456173 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgat 3456272  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |  |||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  3456273 tagtgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 3456332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 33839705 - 33839794
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||||||||||||||||||||||| || |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 40328004 - 40328100
Alignment:
Q  71 aaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||| ||||||| ||||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  40328004 aaaggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatttt 40328100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 37217009 - 37216850
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||  | | ||||||| |||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  37217009 ccaataaaatctcagccttgctgaaaatcatagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 37216910  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||| ||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  37216909 tattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 37216850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 8320540 - 8320379
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatgggg-tggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtg 104  Q
    |||| |||||||||||||| || |||||||||||| | ||||||||||||||           ||||||| |||||||||||||||||||||||  ||||    
T  8320540 ccaataaaatctcagcctggccagaaatcatgggggtagtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtg 8320441  T
Q  105 attgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||    
T  8320440 attattgtgccatgtcattcttgaatctttctt-ataaaatcattattgatatctagcatttt 8320379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 34482783 - 34482685
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||| |||||||||||||||||||||||  ||||||| |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 34482685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 24343656 - 24343818
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnat---gaaaggttaataaatgagactgaaatctatgggtg 104  Q
    |||| ||||||||| |||||||| ||||||| |||||||||||||||||||          |   ||||||||||||||| ||||||||||||| |||||    
T  24343656 ccaataaaatctcatcctgaccgaaaatcatcgggtggtgggtgttatgtattttttttttttttgaaaggttaataaataagactgaaatctaagggtg 24343755  T
Q  105 attgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||| |  |  |||||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  24343756 attatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacatttt 24343818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 8361924 - 8361836
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatttt 8361836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 9796914 - 9796826
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||||||| | |||||| ||||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatttt 9796826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 48161014 - 48161174
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||||||||  ||||||| |||||||||||||||||||||||           ||||||  |||||||||||||||||||||||  |||||    
T  48161014 ccaataaaatctcagcctagccggaaaccatggggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagactgaaatctaaaggtga 48161113  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    || ||||| |||||| |||||  || |||||| |||||||||||||||||||||| ||||||    
T  48161114 ttattgtgtcatgtcgttcttggatatttctt-ataaaatcattcttgatatctagcatttt 48161174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 41224414 - 41224502
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||| |||||| || |||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatttt 41224502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 46919072 - 46919163
Alignment:
Q  76 ttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||| |||| ||||||||  ||||||| || |||||||||||| || ||||||| ||||||||||||||||||||||||| ||||||    
T  46919072 ttaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 42297973 - 42298090
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||| ||| ||||||||||||||||||| | |||||||||         ||||||||||||||||||||||||||||||| ||||| ||    
T  42297973 ccaataaaatctcagtctggccggaaatcatggggtggtagatgttatgtatttttttt-atgaaaggttaataaatgagactgaaatctaagggtggtt 42298071  T
Q  108 gttgtgccatgtcattctt 126  Q
     ||||| ||||||||||||    
T  42298072 attgtgtcatgtcattctt 42298090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 42297463 - 42297549
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatc 96  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||         ||||||||||||||||||||||| |||||    
T  42297463 ccaataaaatctcagcctgaccggaaatcatggggtggtggatgttatgta--tttttttatgaaaggttaataaatgagactaaaatc 42297549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 30385120 - 30385170
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  30385120 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 3574515 - 3574580
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 3574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 2754794 - 2754729
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||  ||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 3456141 - 3456076
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || |||||| |||||||||||  ||||||||||||||| ||||||||||    
T  3456141 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatat 3456076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 11347345 - 11347280
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||| ||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11347280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 37217049 - 37217106
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  37217049 gggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 37217106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 41883174 - 41883031
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtgattgtt 110  Q
    |||||||||| ||| |  ||||||||||||||||||||||||||||           || ||||||| |||||| ||||||||||| |  | ||||| ||    
T  41883174 aaaatctcagactggctagaaatcatggggtggtgggtgttatgtatttttttttttataaaaggttgataaataagactgaaatccaaagatgattatt 41883075  T
Q  111 gtgccatgtcattcttaaatctttcttgataaaatcattcttga 154  Q
     | ||||||||||||| |||||||||| ||||||||||| ||||    
T  41883074 ttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 48160982 - 48160917
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || |||||| |||||||||||  ||||||||||||||| ||||||||||    
T  48160982 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatat 48160917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 34482866 - 34482824
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggt 50  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  34482866 ccaataaaatctcagcctggccggaaatcatggggtggtgggt 34482824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 40327934 - 40327984
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| ||||||||| |||| ||||||||||| |||||||||||||||||||    
T  40327934 ccaataaaatctcaacctggccggaaatcatagggtggtgggtgttatgta 40327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 3137402 - 3137467
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  |||||||| |||||| ||||||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 3137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 6041961 - 6041896
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || || |||||||||||| ||  ||||||||||||||| ||||||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 6041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 8320580 - 8320637
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || |||||| |||||||||||  ||||||||||||||| ||||||||||    
T  8320580 gggtgattattttgccatatcattcttaaaattttcttgataaaatctttcttgatat 8320637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||  ||||||| || ||||||||||||||| ||| |||||||| |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 19650888 - 19650953
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||  ||||||| || ||||||||||||||||||  ||||||||||||||| ||||| ||||    
T  19650888 aaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatat 19650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 22426332 - 22426397
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || |||||||||||| |||||  ||||||||||||||| ||||| ||||    
T  22426332 aaatctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatat 22426397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 42297407 - 42297365
Alignment:
Q  115 catgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||||||||||  ||||||||||||||| ||||||||||    
T  42297407 catgtcattcttaaaattttcttgataaaatctttcttgatat 42297365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 42921197 - 42921155
Alignment:
Q  115 catgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||||||||||  ||||||||||||||| ||||||||||    
T  42921197 catgtcattcttaaaattttcttgataaaatctttcttgatat 42921155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 33145789 - 33145725
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||| || |||||||| ||||||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaa-attttttaataaaatctttcttgatat 33145725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 37522122 - 37522065
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || || |||||||||||||||  |||||||| |||||| ||||||||||    
T  37522122 gggtgattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatat 37522065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 41224363 - 41224392
Alignment:
Q  29 cggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||||||||||||||||||||||    
T  41224363 cggaaatcatggggtggtgggtgttatgta 41224392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 47738162 - 47738117
Alignment:
Q  112 tgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||| |||||||| ||| ||||||||||||||| ||||||||||    
T  47738162 tgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 30385080 - 30385024
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgata 156  Q
    |||||||| || |||||||||||| || ||  ||||||||||||||| |||||||||    
T  30385080 gggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgata 30385024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 6e-46; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 34665491 - 34665654
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||||| || ||| ||||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||| ||||||||    
T  34665491 ccaataaaatctcagcttggccgaaaatcatggagtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaagggtgatt 34665590  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
     |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||    
T  34665591 attgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttttcttt 34665654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 20091757 - 20091595
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||| |||||||    
T  20091757 ccaataaaatctcagcctagccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgat 20091658  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttct 170  Q
    | |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  20091657 tattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttttct 20091595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 3596997 - 3596838
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  3596997 ccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 3596898  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  3596897 tattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 3596838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 26042069 - 26041910
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  26042069 ccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 26041970  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  26041969 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 26041910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 37986011 - 37985853
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||         ||||||| |||||||||| ||||||||||||  |||||||    
T  37986011 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatctaaaggtgatt 37985912  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  37985911 attgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 37985853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 17841806 - 17841647
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  17841806 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 17841707  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  17841706 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 17841647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 6108189 - 6108030
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  6108189 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgat 6108090  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||| |||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  6108089 tattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 6108030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 25581195 - 25581036
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  25581195 ccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 25581096  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||  ||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  25581095 tattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 25581036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 40780085 - 40779926
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  40780085 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 40779986  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  40779985 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 40779926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 37132575 - 37132471
Alignment:
Q  69 tgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcattttt 168  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcattttt 37132476  T
Q  169 ctttg 173  Q
    |||||    
T  37132475 ctttg 37132471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 15187669 - 15187828
Alignment:
Q  8 ccaagaaaatctc-agcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||| |||||| ||||||||||||| |||||||||||||||||         ||||||| |||||||||||||||||||||||  ||||||    
T  15187669 ccaataaaatctctagcctggccggaaatcatggagtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 15187768  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||| |||||||||||  ||||||||| |||||||||||||||||||||| ||||||    
T  15187769 tattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 15187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 42754998 - 42754839
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  42754998 ccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 42754899  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  42754898 tattgtaccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 42754839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 1645916 - 1645756
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtgattgtt 110  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||  ||||||| ||    
T  1645916 aaaatctcagcctggtcggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 1645817  T
Q  111 gtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||| |||||| ||||    
T  1645816 gtgccatgtcattcttggttctttctt-ataaaatcattcttgatatctagcattttccttt 1645756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 32064854 - 32065014
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||||||||| |||||||||||||| || |||||||||||||           ||||||| |||||||||||||||||||||||  |||||    
T  32064854 ccaataaaatctcagcctggccggaaatcatgggctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtga 32064953  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    || ||||| |||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  32064954 ttattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 32065014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 38017048 - 38017204
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtga-ttgttg 111  Q
    |||||||||||||| |||||||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||  ||| | || |||    
T  38017048 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttt-tgaaagattaataaatgagactgaaatctaaaggtaaattattg 38017146  T
Q  112 tgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttct 170  Q
    || |||||||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  38017147 tgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttttct 38017204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 30055626 - 30055784
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||||||||| || ||||||||||||||||||||| |||||||||          ||||||||||||||||||||||| ||||||| |||||||    
T  30055626 ccaataaaatctcagc-tggccggaaatcatggggtggtggatgttatgtattttttttttatgaaaggttaataaatgagactaaaatctaagggtgat 30055724  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||| |||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  30055725 tattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 30055784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 24211267 - 24211167
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 24211169  T
Q  168 tc 169  Q
    ||    
T  24211168 tc 24211167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 10044518 - 10044616
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||| ||||||||||||| |||||||||  ||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 10044616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 14129029 - 14129127
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||| |||||||||||||||||||||||  ||||||| |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatatctagcatttt 14129127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 24844815 - 24844657
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||| |||||  ||||||||| |||||||||||||||||||         ||||||||||||||| | ||| | ||||||| | ||||||    
T  24844815 ccaataaaatctcatcctgattggaaatcatagggtggtgggtgttatgtatttttttt-atgaaaggttaataattaagattaaaatctaagagtgatt 24844717  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     || ||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  24844716 attttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacatttt 24844657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 30834989 - 30834852
Alignment:
Q  30 ggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaa 129  Q
    |||||||||||||||||||||||||||||         || ||| ||| | |||| | ||||||||||| ||||| || || || |||||||||||| ||    
T  30834989 ggaaatcatggggtggtgggtgttatgtattttattttatcaaaagttgaaaaataacactgaaatctaagggtggttattctgtcatgtcattctttaa 30834890  T
Q  130 tctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30834889 tctttcttgataaaatcattcttgatatctatcatttt 30834852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 31347659 - 31347568
Alignment:
Q  80 taaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttccttt 31347568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 1503730 - 1503640
Alignment:
Q  76 ttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  1503730 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 1503640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 35353150 - 35353299
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||          ||||||| ||||||||||||| | |||| ||  ||||||    
T  35353150 ccaataaaatctcagcctggccggaaatcatgaggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgat 35353249  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  35353250 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 8453948 - 8454061
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgattgttgt 112  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||         ||||||| |||||||||||||||||||||||  ||||||| ||||    
T  8453948 aaaatctcagcctggccggaaattatggtgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 8454047  T
Q  113 gccatgtcattctt 126  Q
    ||||||||||||||    
T  8454048 gccatgtcattctt 8454061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 32393967 - 32394114
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||| ||  ||| ||||||||||||||| |||||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  32393967 ccaataaaatctcagtctagccgaaaatcatggggtggtaggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 32394066  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
     ||||| |||||||||||||||| ||| || |||||||||||||||||||    
T  32394067 attgtg-catgtcattcttaaatattt-tttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 3890506 - 3890412
Alignment:
Q  72 aaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcattt 166  Q
    ||||||||||||| ||| | |||||||  ||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  3890506 aaggttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 41819663 - 41819590
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgata 141  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||    
T  41819663 atgataggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 39772757 - 39772608
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||| | |||||||||||||| ||||||||||||||||          ||||||| |||||||| || |||||||||||  ||||||    
T  39772757 ccaataaaatctcagccag-ccggaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaacgaaactgaaatctaaaggtgat 39772659  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatc 158  Q
    | ||||| ||||||||||||  ||||||||| ||||||||||||||||||||    
T  39772658 tattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 7022159 - 7022252
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    ||||||||||||||||||||| ||| |||| ||||| | |||||||||| ||||||||||||| |||||||| |||||||||| |||||| ||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgat-aaatcattgttgatatctagcattttccttt 7022252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 7017743 - 7017655
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||||||| || ||||| || |   ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgat-aaatcattcttgatatctagcatttt 7017655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 24211509 - 24211459
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  24211509 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 42755030 - 42755103
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatt 165  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcatt 42755103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 1645953 - 1646018
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||| ||||||||  ||||||||||||||| ||||||||||    
T  1645953 aaatctaagggtgattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatat 1646018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 1886627 - 1886672
Alignment:
Q  112 tgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  1886627 tgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 14128941 - 14128876
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatat 14128876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 27782105 - 27782170
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || |||||||||||| || ||||||||||||||||||  ||||||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatat 27782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 32064822 - 32064757
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 32064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 32393927 - 32393870
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  32393927 gggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 32393870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 34665459 - 34665394
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 34665394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 35353118 - 35353053
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  |||||||| |||||| ||||||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 35353053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 37986043 - 37986108
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 37986108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 41819766 - 41819831
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || |||||| ||||||||||| | |||||||||||||| ||||||||||    
T  41819766 aaatctaagggtgattattctgccatatcattcttaaaacattcttgataaaatctttcttgatat 41819831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 41819734 - 41819684
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||||| | |||||||||||||||||||| ||||||||||    
T  41819734 ccaataaaatctcagcccggccggaaatcatggggtggtgtgtgttatgta 41819684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 6108221 - 6108286
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 6108286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 17841838 - 17841903
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  |||||||| |||||| ||||||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 17841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 20091789 - 20091854
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||  ||||||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 20091854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 27835409 - 27835293
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta-nnnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||   ||||||||||||| ||||||||||||||||          || |||||||||||||||||| ||||||||| || ||||    
T  27835409 ccaataaaatctcagcctagacggaaatcatgggatggtgggtgttatgtatttttgttttataaaaggttaataaatgagattgaaatctaaggatgat 27835310  T
Q  107 tgttgtgccatgtcatt 123  Q
    | ||||| ||| |||||    
T  27835309 tattgtgtcatatcatt 27835293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 31347770 - 31347835
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||| |||||||| |||||  ||||||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatat 31347835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 38017040 - 38016983
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  38017040 gggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 40780117 - 40780182
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  |||||||| |||||| ||||||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 40780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 7017801 - 7017771
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  7017801 ccggaaatcatggggtggtgggtgttatgta 7017771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 7022107 - 7022137
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  7022107 ccggaaatcatggggtggtgggtgttatgta 7022137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 37132657 - 37132699
Alignment:
Q  103 tgattgttgtgccatgtcattcttaaatctttcttgataaaat 145  Q
    ||||| || ||||||||||||||||||| ||||||||||||||    
T  37132657 tgattattctgccatgtcattcttaaatttttcttgataaaat 37132699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 8453911 - 8453846
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || || |||||||||||| ||  |||||||| |||||| ||||||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatat 8453846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 15187637 - 15187572
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||| ||| || |||||| |||||||| ||  ||||||||||||||| ||||||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 15187572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 15972865 - 15972914
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgata 141  Q
    ||||||| |||||||| || || |||||||||||| ||||||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttcttgata 15972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 24211549 - 24211606
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || ||||||| ||||||| ||  ||||||||||||||| ||||||||||    
T  24211549 gggtgattattctgccatgccattcttgaaattttcttgataaaatctttcttgatat 24211606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 26042104 - 26042169
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || || |||||||||||| ||  ||||||||||||||| ||||| ||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatat 26042169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 39772789 - 39772854
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||| ||||||||||  ||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatat 39772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 24844847 - 24844926
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    ||||||| |||||||| || || |||||||||||| ||| |||||| |||||||  |||||||||| || ||||| |||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcatttctcttt 24844926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 36073459 - 36073617
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  36073459 ccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 36073558  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  36073559 attgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 36073617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 9088979 - 9089140
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  | ||||    
T  9088979 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgat 9089078  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttc 169  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||    
T  9089079 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttttc 9089140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 21802278 - 21802117
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgg---gtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtg 104  Q
    |||| |||||||||| ||| |||||||||||||||||||||   ||||||||||         ||||||| ||||||||||||||||||||||| |||||    
T  21802278 ccaataaaatctcagtctggccggaaatcatggggtggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaagggtg 21802179  T
Q  105 attgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||| ||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  21802178 attattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 21802117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 22199370 - 22199532
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||||||| || ||||||||||| ||||||||||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  22199370 ccaataaaatctcagcctggccagaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 22199468  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
     ||||||||||||||||||  ||||||||| |||||||||||||||||||||| |||||| ||||    
T  22199469 attgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttccttt 22199532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 24128348 - 24128511
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||          ||||||| |||||||||||||||||||||||  ||| ||    
T  24128348 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaat 24128447  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttctt 171  Q
    | ||||| |||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  24128448 tattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttttctt 24128511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 44893169 - 44893010
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  44893169 ccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 44893070  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  44893069 tattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 44893010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 44893535 - 44893694
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  44893535 ccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 44893634  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  44893635 tattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 44893694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 46441953 - 46442112
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  46441953 ccaataaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 46442052  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  46442053 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 46442112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 47290175 - 47290339
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          |||||||  ||||||||||||||||||||||  ||||||    
T  47290175 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgat 47290274  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    | |||| ||||||||||||| ||| |||||| |||||||||||||||||||||| |||||| ||||    
T  47290275 tattgtaccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttt 47290339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 7745068 - 7744909
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||  ||||||||||||| |||||||||  ||||||    
T  7745068 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgat 7744969  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||| ||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  7744968 tattgtgcaatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 7744909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 37219801 - 37219906
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||| ||| ||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  168 tctttg 173  Q
     |||||    
T  37219901 cctttg 37219906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 53123140 - 53123299
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  | ||||    
T  53123140 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgat 53123239  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  53123240 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 53123299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 17655539 - 17655701
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttat--gtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||||||||| |||||||||||||| || ||||||||||  |||         |||||||||||||||||||||||||||||||  ||| |    
T  17655539 ccaataaaatctcagcctggccggaaatcatgggatgatgggtgttatatgtatttttttt-atgaaaggttaataaatgagactgaaatctaaaggtaa 17655637  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttc 169  Q
    || || || |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  17655638 ttattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttttc 17655701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 23964416 - 23964269
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtgattgtt 110  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||           ||||||| ||||||||||||| |||||||||  | ||||| ||    
T  23964416 aaaatctcagcctgaccggaaatcatgcggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaagatgattatt 23964317  T
Q  111 gtgccatgtcattcttaaatctttcttgataaaatcattcttgatatct 159  Q
     |||||||||||||||||||||||||| |||||||||||||||||||||    
T  23964316 atgccatgtcattcttaaatctttctt-ataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 50156534 - 50156376
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  50156534 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatcta-aggtgat 50156436  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | || || |||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  50156435 tattatgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacatttt 50156376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 2624951 - 2625105
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgattgttg 111  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||| |||    
T  2624951 aaaatctcagtctggccggaaatcatggagtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 2625050  T
Q  112 tgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||| |||||||| || |||||||||| |||||||||||||||||||||| ||||||    
T  2625051 tgctatgtcatttttgaatctttctt-ataaaatcattcttgatatctaacatttt 2625105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 10442745 - 10442584
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnat--gaaaggttaa-taaatgagactgaaatctatgggtg 104  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||           |  ||||| |||| |||||||||||||||||||  ||||    
T  10442745 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtttttttttttttttgaaagattaaataaatgagactgaaatctaaaggtg 10442646  T
Q  105 attgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  10442645 attattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 10442584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 4751555 - 4751715
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||||| |||  ||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||  ||||     
T  4751555 ccaataaaatctcagtctggtcggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtgg 4751654  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    || |||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||    
T  4751655 ttattgtgccatgtcattcttaaatttttctt-ataaaattattcttgatatctagcatttt 4751715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 30563318 - 30563452
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||||||||||||| ||||||||||||| | |||||    
T  30563318 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgat 30563417  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgata 141  Q
    | ||||| |||||||||||| ||||||||||||||    
T  30563418 tattgtgtcatgtcattcttgaatctttcttgata 30563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 49387844 - 49387684
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||           ||||||| |||||||||||||||||||||||  |||||    
T  49387844 ccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtga 49387745  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    || |||||||||||||||||| ||| |||||| |||||||||| ||||||||||| ||||||    
T  49387744 ttattgtgccatgtcattcttgaatttttctt-ataaaatcatccttgatatctaacatttt 49387684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 31078775 - 31078616
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||          ||||||| ||||||||||||| |||||||||  | ||||    
T  31078775 ccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgat 31078676  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| ||| || |||||||||||||||||||||| ||||||    
T  31078675 tattgtgccatgtcattcttgaat-tttttttataaaatcattcttgatatctagcatttt 31078616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 24392854 - 24392947
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    ||||||||||||||||||||| || ||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgat-aaatcattcttgatatctagcatttttcttt 24392947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 36073056 - 36073219
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-----atgaaaggttaataaatgagactgaaatctatggg 102  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||              ||||||| |||||||||||||||||||||||  ||    
T  36073056 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaaatctaaagg 36073155  T
Q  103 tgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    || || |||||||||||||||||| ||| |||||| ||||||||||| |||||||||| ||||||    
T  36073156 tggttattgtgccatgtcattcttgaatttttctt-ataaaatcatttttgatatctagcatttt 36073219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 11314144 - 11314048
Alignment:
Q  71 aaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||||||||| |||||  |||||| |||||||| ||||| ||||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcatttt 11314048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 42671840 - 42671937
Alignment:
Q  70 gaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||||| |||||||||| ||||||| |  ||||| || || |||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 42671937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 37934897 - 37934738
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||| |||  ||||||| ||||| |||||| |||||||||         ||||||||||||||||||||| ||||||||| ||||||||    
T  37934897 ccaataaaatctcagtctggtcggaaattatgggatggtggttgttatgtatttttttttatgaaaggttaataaatgagattgaaatctaagggtgatt 37934798  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     ||||| ||| ||||| || |||||||||| ||||||||| || | ||||||| ||||||    
T  37934797 attgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacatttt 37934738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 33530579 - 33530481
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||| ||||||||| |||||||||||||  ||||||| ||||||||||||||||||  |||||| || |||||||||||||||||||||| ||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttt-tttataaaatcattcttgatatctagcatttt 33530481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 25063424 - 25063371
Alignment:
Q  114 ccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  25063424 ccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatttt 25063371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 36073349 - 36073258
Alignment:
Q  76 ttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||| ||||||||||||| | || ||| || || ||| ||||||||||||||||||||||||||||||| ||  |||||| ||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcatttt 36073258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 7745100 - 7745165
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 7745165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 33530676 - 33530741
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatat 33530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 10442777 - 10442842
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 10442842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 23964453 - 23964518
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 23964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 31078807 - 31078872
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 31078872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 42671746 - 42671681
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||| ||| ||||||||||| || |||||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatat 42671681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 44744607 - 44744697
Alignment:
Q  73 aggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||||||| ||||||||||||| || | ||| ||| | |||||||||||| ||    |||||||||||||||| |||||||||| ||||||    
T  44744607 aggttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaa----tcttgataaaatcatttttgatatctaacatttt 44744697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 49387876 - 49387941
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 49387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 36073741 - 36073795
Alignment:
Q  102 gtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgata 156  Q
    |||||| || || ||||||||||||||||||||||| |||||||| |||||||||    
T  36073741 gtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 2624914 - 2624849
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || |||||| |||||||| ||  ||||||||||||||| ||||||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatat 2624849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 21802310 - 21802375
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||  ||||||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 21802375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 22199338 - 22199273
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| || ||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 22199273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 24392736 - 24392679
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || ||||||||||||||| ||| |||||||| |||||| ||||||||||    
T  24392736 gggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 24392679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 36073024 - 36072959
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| ||||| || || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 36072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 47290143 - 47290078
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  |||||||| |||||| ||||||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 47290078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 50156566 - 50156631
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  |||||||| |||||| ||||| ||||    
T  50156566 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatat 50156631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 53999020 - 53998988
Alignment:
Q  128 aatctttcttgataaaatcattcttgatatcta 160  Q
    |||||||||||||||||||||||||||||||||    
T  53999020 aatctttcttgataaaatcattcttgatatcta 53998988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 4751523 - 4751458
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| ||||| || || |||||||||||||||  |  ||||||||||||||| ||||||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 4751458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 24128316 - 24128251
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| || ||||| || ||||||||||||||| ||  |||||||| |||||| ||||||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 24128251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 33530644 - 33530596
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgt 57  Q
    |||| ||||| |||||||| ||||||||||| ||||||||||||||||||    
T  33530644 ccaataaaatttcagcctggccggaaatcat-gggtggtgggtgttatgt 33530596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 36073419 - 36073362
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || ||||||||||||||| ||  |||||||| |||||| ||||||||||    
T  36073419 gggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 36073362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 36073699 - 36073650
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgt 57  Q
    |||| ||||||||||  || |||||||||||||||||||| |||||||||    
T  36073699 ccaataaaatctcagtttggccggaaatcatggggtggtgcgtgttatgt 36073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 44893503 - 44893438
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||| |||| |||||| ||||||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatat 44893438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 46441921 - 46441856
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  |||||| | |||||| ||||||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatat 46441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 6e-43; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 6043467 - 6043309
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  6043467 ccaataaaatctcagcctggccggaaatcatggggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 6043368  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  6043367 attgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 6043309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 14138777 - 14138935
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||         ||||||| ||||||||||||| |||||||||  |||||||    
T  14138777 ccaataaaatctcagcctgatcggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggtgatt 14138876  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     |||||||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  14138877 attgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 14138935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 4892311 - 4892470
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnna-tgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||         | |||||| |||||||||||||||||||||||  ||||||    
T  4892311 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgat 4892410  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  4892411 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 4892470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 33584285 - 33584126
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  33584285 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 33584186  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  33584185 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 33584126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 3521942 - 3521804
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattctta 127  Q
    |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  3521942 ccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctta 3521843  T
Q  128 aatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||| |||||| |||||||||||||||||||||| ||||||    
T  3521842 aatttttctt-ataaaatcattcttgatatctagcatttt 3521804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 8145484 - 8145641
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||||||||  ||||||||||||| ||||||||||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  8145484 ccaataaaatctcagcctggtcggaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 8145582  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  8145583 attgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 8145641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 25398347 - 25398511
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  25398347 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 25398446  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    | ||||||||||||||| || ||| |||||| |||||||||||||||||||||| |||||| ||||    
T  25398447 tattgtgccatgtcattgttgaatttttctt-ataaaatcattcttgatatctagcattttccttt 25398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 12614633 - 12614534
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 12850910 - 12851069
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||  ||||     
T  12850910 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtgg 12851009  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcattt 166  Q
    || |||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||    
T  12851010 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 2477750 - 2477904
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgattgttg 111  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||          ||||||| ||||||||| |||||||||||||  ||||||  |||    
T  2477750 aaaatttcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattg 2477849  T
Q  112 tgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  2477850 tgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcatttt 2477904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 3362887 - 3363047
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||  ||||     
T  3362887 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgg 3362986  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    || ||||| |||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  3362987 ttattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 3363047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 37321749 - 37321590
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||| ||  |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  37321749 ccaataaaatctcagtctagccggaaatcatggggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgat 37321650  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||||||| |||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  37321649 tattgtgccatttcattcttgaatatttctt-ataaaatcattcttgatatctagcatttt 37321590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 22912942 - 22912854
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatttt 22912854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 38899682 - 38899522
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||| ||| ||| |||||||||||||||||||||||| ||          ||||||| |||||||||||||||||||||||  |||| |    
T  38899682 ccaataaaatctcagtctggccgaaaatcatggggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggt 38899583  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| ||| || |||||||||||||||||||||| ||||||    
T  38899582 tattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcatttt 38899522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 11361087 - 11360947
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta-nnnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| ||||||||| ||| |||||||||  | ||||    
T  11361087 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgat 11360988  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcat 148  Q
    | |||||||||||||||||| |||||||||| ||||||||||    
T  11360987 tattgtgccatgtcattcttgaatctttctt-ataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 4433963 - 4433844
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||| ||| |||||||||||||| ||||||||||||||||         ||||||| ||||||||| |||||||||||||  |||||||    
T  4433963 ccaataaaatctcagtctggccggaaatcatgggatggtgggtgttatgtatttttttttatgaaagattaataaataagactgaaatctaaaggtgatt 4433864  T
Q  108 gttgtgccatgtcattctta 127  Q
     |||||||||||||||||||    
T  4433863 attgtgccatgtcattctta 4433844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 17545567 - 17545479
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||||||| || ||||| ||||| |||||||||||||||| ||| ||||| ||||||||||||||||||| ||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcatttt 17545479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 31640896 - 31640763
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||         ||||||||||||||||| |||    ||||||  |  ||||    
T  31640896 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaaggttaataaataagatatcaatctaaagtcgatt 31640797  T
Q  108 gttgtgccatgtcattcttaaatctttcttgata 141  Q
     || ||||||||||||||| ||||||||||||||    
T  31640796 attctgccatgtcattcttgaatctttcttgata 31640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 2477713 - 2477648
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2477648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 11361119 - 11361184
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11361184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 12614480 - 12614522
Alignment:
Q  136 ttgataaaatcattcttgatatctatcatttttctttgcatat 178  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  12614480 ttgataaaatcattcttgatatctagcatttttctttgcatat 12614522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 4892279 - 4892214
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  |||||||| |||||| ||||||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 4892214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 12614721 - 12614786
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || || |||||||||||| ||||||||||||||||||  ||||||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatat 12614786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 22913042 - 22913107
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||| |||||||| |||||| ||||||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatat 22913107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 25398315 - 25398250
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  |||||||| |||||| ||||||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 25398250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 27481952 - 27482077
Alignment:
Q  29 cggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaa-tctatgggtgattgttgtgccatgtcattctt 126  Q
    ||||||||||||||||||||||||||||||          || |||||||||||||| ||| | ||| ||||  ||||||| || ||  |||||||||||    
T  27481952 cggaaatcatggggtggtgggtgttatgtattttttttttataaaaggttaataaataagattaaaaatctaaaggtgattattctgttatgtcattctt 27482051  T
Q  127 aaatctttcttgataaaatcattctt 152  Q
     ||||||| |||||||||||||||||    
T  27482052 gaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 6043499 - 6043564
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || | ||||||||||||| ||  ||||||||||||||| ||||||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatat 6043564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 33584325 - 33584382
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || ||||||||||||||||||  |||||||| |||||| ||||||||||    
T  33584325 gggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 33584382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 10458465 - 10458409
Alignment:
Q  101 ggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| || ||||||||||||||| ||| ||||||||||||||  ||||||||||    
T  10458465 ggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 37321789 - 37321841
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattctt 152  Q
    |||||||| || ||||||||||||||||||  ||||||||||||||| |||||    
T  37321789 gggtgattattctgccatgtcattcttaaaattttcttgataaaatctttctt 37321841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 3362855 - 3362790
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| ||||| || || |||||||||||||||  |  ||||||||||||||| ||||||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 3362790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 14138737 - 14138680
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || |||||||| |||||| ||  ||||||||||||||| ||||||||||    
T  14138737 gggtgattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatat 14138680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 31640928 - 31640977
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgata 141  Q
    ||||||| ||||| || || ||||||||||||||| ||||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttcttgata 31640977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 38899714 - 38899779
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| ||||| || || |||||||||||||||  |  ||||||||||||||| ||||||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 38899779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 33696805 - 33696965
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||  |||||    
T  33696805 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtga 33696904  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  33696905 ttattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcatttt 33696965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 28675262 - 28675416
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgattgttg 111  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||          ||||||||||||||||||||||||||||||| |||||||| |||    
T  28675262 aaaatctcagcctggccggaaatcatggggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatctaagggtgattattg 28675361  T
Q  112 tgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    || |||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  28675362 tgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 28675416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 17175977 - 17175818
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  17175977 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 17175878  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||| ||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  17175877 tattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 17175818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 2309379 - 2309220
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||||||||| || |||||||||||||||| ||||||||||||||          ||||||||||||||||||||||||||||||| |||||||    
T  2309379 ccaataaaatctcagcttggccggaaatcatggggttgtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgat 2309280  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| |||||||||| ||||||||||  |||||||||| ||||||    
T  2309279 tattgtgccatgtcattcttgaatctttctt-ataaaatcatcgttgatatctagcatttt 2309220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 17705421 - 17705261
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||| ||| |||||||||||||| ||||||||||||||||         |||||||||||||||||||||||||||||||  |||||||    
T  17705421 ccaataaaatctcagtctggccggaaatcatgggatggtgggtgttatgtaatttttt--atgaaaggttaataaatgagactgaaatcta-aggtgatt 17705325  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
     ||||| |||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||||    
T  17705324 attgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccttt 17705261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 18365529 - 18365371
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||| |||| |||||||||||||||| ||||||||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  18365529 ccaataaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 18365430  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     |||||| |||||||||||  ||||||||| |||||||||||||||||||||| ||||||    
T  18365429 attgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 18365371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 18370793 - 18370635
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||| |||| |||||||||||||||| ||||||||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  18370793 ccaataaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 18370694  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     |||||| |||||||||||  ||||||||| |||||||||||||||||||||| ||||||    
T  18370693 attgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 18370635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 33695283 - 33695123
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||  |||||    
T  33695283 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtga 33695184  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    || ||||| ||| |||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  33695183 ttattgtgacatatcattcttaaatatttctt-ataaaatcattcttgatatctagcatttt 33695123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 29693615 - 29693714
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||| |||||||| ||||||||||||| |||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 6031697 - 6031546
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||||||||           || |||| |||||||||||||||||||||||  |||||    
T  6031697 ccaataaaatcccagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtga 6031598  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatc 158  Q
    || |||||||||||||||||||||||||| || ||||||||||||||||||||    
T  6031597 ttattgtgccatgtcattcttaaatcttt-tttataaaatcattcttgatatc 6031546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 171
Target Start/End: Complemental strand, 11548474 - 11548382
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttctt 171  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||| ||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgat-aaatcattcttgatatctagcatttttctt 11548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 18889594 - 18889466
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgattgttgt 112  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||         ||||||| |||||||||||||||||||||||  ||||||| ||||    
T  18889594 aaaatctcagccttgccggaaatcatggggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 18889495  T
Q  113 gccatgtcattcttaaatctttcttgata 141  Q
    |||||||||||||| |||| |||||||||    
T  18889494 gccatgtcattcttgaatcattcttgata 18889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 23291040 - 23290878
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn----atgaaaggttaataaatgagactgaaatctatgggt 103  Q
    |||| |||||||||||||| || |||||||||||||| |||||||||||||             ||||||| |||||||||||||||||||||||  |||    
T  23291040 ccaataaaatctcagcctggccagaaatcatggggtgatgggtgttatgtattttcttttttttatgaaagattaataaatgagactgaaatctaaaggt 23290941  T
Q  104 gattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     ||| ||||||||| |||||||| |||||||||| ||||||||||| |||||||||| ||||||    
T  23290940 aattattgtgccatatcattcttgaatctttctt-ataaaatcatttttgatatctagcatttt 23290878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 32702334 - 32702473
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattctt 126  Q
    ||||||||||||||||||||||| |||||||          ||||||| |||||||||||||||||||||||  ||| ||| ||||| ||||||||||||    
T  32702334 ccggaaatcatggggtggtgggtcttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattctt 32702433  T
Q  127 aaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     ||| |||||| |||||||||||||||||||||| ||||||    
T  32702434 gaatttttctt-ataaaatcattcttgatatctagcatttt 32702473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 8515682 - 8515556
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||||||||| |||||||||||||||||||| |||||||||         |||||| |||||||||| ||||||||||||| | ||||||    
T  8515682 ccaataaaatctcagcctgatcggaaatcatggggtggtggatgttatgtatttttttttatgaaatgttaataaataagactgaaatctaagagtgatt 8515583  T
Q  108 gttgtgccatgtcattcttaaatcttt 134  Q
     || | |||||||||| ||||||||||    
T  8515582 attctaccatgtcatttttaaatcttt 8515556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 9752201 - 9752111
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatcta 98  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||    
T  9752201 ccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatcta 9752111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 6127352 - 6127287
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 6127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 23291072 - 23291137
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 23291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 34238948 - 34238884
Alignment:
Q  102 gtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||| ||||| |||||||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatctt-cttgataaaatcattcttgatatctagcatttt 34238884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 6127408 - 6127505
Alignment:
Q  31 gaaatcatggggtggtgggtgttatgtannnnnnnnnat--gaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattctt 126  Q
    ||||||||||||||||||||||||||||         ||  ||||| |||||||||||||||||||||||   |||||| ||||||||||||||||||    
T  6127408 gaaatcatggggtggtgggtgttatgtatttttttttatatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattctt 6127505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 8515723 - 8515778
Alignment:
Q  102 gtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatat 8515778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 582602 - 582524
Alignment:
Q  90 tgaaatctatgggtgattgttgtgcc-atgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||||  ||||||| || |||| || |||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacatttt 582524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 25987039 - 25987089
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||    
T  25987039 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 29693547 - 29693597
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||    
T  29693547 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 29693597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 17705453 - 17705518
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || || |||||||||||||||  ||||||||||||||| ||||||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 17705518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 33695315 - 33695380
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 33696773 - 33696708
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 2121059 - 2121006
Alignment:
Q  114 ccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||| ||||||| || ||||||||||| |||||||||| ||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacatttt 2121006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 11548576 - 11548641
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||| |||||||| |||||  ||||||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatat 11548641  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 17176009 - 17176074
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || || |||||||||||| ||  ||| ||||||||||| ||||||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatat 17176074  T

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Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 18365569 - 18365626
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || ||||||||||||||| ||  ||| ||||||||||| ||||||||||    
T  18365569 gggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18365626  T

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Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 18370833 - 18370890
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || ||||||||||||||| ||  ||| ||||||||||| ||||||||||    
T  18370833 gggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18370890  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 28675225 - 28675160
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| ||  | |||||||||||| ||  ||||||||||||||| ||||||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatat 28675160  T

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Target: scaffold0085 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 47959 - 48117
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||  | |||||    
T  47959 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaagatgatt 48058  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     |||||| ||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  48059 attgtgctatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 48117  T

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Target: scaffold0085; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 47927 - 47863
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgata 156  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| |||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgata 47863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 24395081 - 24395239
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  24395081 ccaataaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgatt 24395180  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     |||||||||||||||||| ||||||| || |||||||||||||||||||||| ||||||    
T  24395181 attgtgccatgtcattcttgaatcttt-tttataaaatcattcttgatatctagcatttt 24395239  T

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Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 3962088 - 3962246
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  3962088 ccaataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 3962187  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     ||||||||||||||||||  || |||||| |||||||||||||||||||||| ||||||    
T  3962188 attgtgccatgtcattcttggatatttctt-ataaaatcattcttgatatctagcatttt 3962246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 45637821 - 45637979
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||| ||| ||||||||||||||||||||| |||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  45637821 ccaataaaatctcagtctggccggaaatcatggggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 45637920  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     |||||||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  45637921 attgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 45637979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 4974691 - 4974532
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||||||||  || |||||||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||| |||||||    
T  4974691 ccaataaaatctcagtttggccggaaatcatgaggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgat 4974592  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||||||| || |||||||||||||||||||||| ||||||    
T  4974591 tattgtgccatgtcattcttgaatcttt-tttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 42611920 - 42612079
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||||||||          ||||||| ||||||||| |||||||||||||  ||||||    
T  42611920 ccaataaaatttcagtctgaccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgat 42612019  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  42612020 tattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcatttt 42612079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatcta 160  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 48880883 - 48880724
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| ||||||||||| |||||||||||   |||||    
T  48880883 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgat 48880784  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  48880783 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 48880724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 20010054 - 20009893
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||| |||| |||||||| |||||||  |||||||||||||         || |||||||||||||||||||| ||||||| |  |||||    
T  20010054 ccaataaaatctcaacctggccggaaattatggggttatgggtgttatgtattttttcttattaaaggttaataaatgagactaaaatctaagtatgatt 20009955  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttc 169  Q
     ||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  20009954 attgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttttc 20009893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 42696197 - 42696352
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgattgttg 111  Q
    ||||||||| |||| |||||||||| |||||||||| |||||||||          |||||| |||||||||||||||||||||||| |||||||| |||    
T  42696197 aaaatctcaacctggccggaaatcaaggggtggtggatgttatgtattttttttttatgaaaagttaataaatgagactgaaatctaagggtgattattg 42696296  T
Q  112 tgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||||||||||| ||| ||| |||||||||||||| |||||||||| ||||||    
T  42696297 taccatgtcattcttgaattttttttgataaaatcattattgatatctaacatttt 42696352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 37476965 - 37476877
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgat-aaatcattcttgatatctagcatttt 37476877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 34483008 - 34483106
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||| ||||||||||||| |||||||||  ||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 34483106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 30848678 - 30848837
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||| | ||||||||||||||          ||||||| |||||||||||||||||||| ||  ||||||    
T  30848678 ccaataaaatctcagtctggccggaaatcatgggatagtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgat 30848777  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| |||||| ||||||||||||||| ||||||    
T  30848778 tattgtgccatgtcattcttgaatttttctt-ataaaagcattcttgatatctagcatttt 30848837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 18037157 - 18037251
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttctttg 173  Q
    |||||||| |||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||| |||||||||| |||||| |||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgat-aaatcattgttgatatctagcattttcctttg 18037251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 35876414 - 35876512
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||| |||||||||||||||||||||||  ||||||| ||||||||||||||| ||| || |||||| |||||||||||||||||||||| ||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttctt-ataaaatcattcttgatatctagcatttt 35876512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 15577799 - 15577639
Alignment:
Q  15 aatctcagcctgaccggaaatcatggggtggtgggtgttatgta----nnnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgattgtt 110  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||             || |||| |||||||||||||||||||||||  ||||||| ||    
T  15577799 aatctcagtctggccggaaatcatgggttggtgggtgttatgtatttttttttttttataaaagattaataaatgagactgaaatctaaaggtgattatt 15577700  T
Q  111 gtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    ||| ||||||||||||  ||||||||| |||||||||||||||||||||| |||||| ||||    
T  15577699 gtgacatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttccttt 15577639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 15329444 - 15329547
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||| |||||||||||||||||||||||   |||||| |||||||||||||||||| ||| |||||| |||||||||||||| ||||||| ||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattctttatatctagcatttt 15329542  T
Q  168 tcttt 172  Q
     ||||    
T  15329543 ccttt 15329547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 35445567 - 35445665
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||| |||||||||||||||||||||||  ||||||| ||||| ||| |||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 35445665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 15238564 - 15238652
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||||||| || ||||| ||||| |||||||||||||||| ||| ||||| ||||||||||||||||||| ||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcatttt 15238652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 25167735 - 25167653
Alignment:
Q  84 tgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||||||||||  ||||||| |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 25167653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 18037047 - 18036982
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatt 165  Q
    |||||||| || ||||||||||||||||||| |||||||| |||||| |||||||||| |||||||    
T  18037047 gggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatatatatcatt 18036982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 4974723 - 4974788
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 4974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 34482912 - 34482847
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatat 34482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 42611888 - 42611823
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 45637789 - 45637724
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 45637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 15577841 - 15577903
Alignment:
Q  95 tctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 25167806 - 25167756
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||| ||| ||||||||||||||||| |||||||||||||    
T  25167806 ccaataaaatctcagtctggccggaaatcatggggtgatgggtgttatgta 25167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 29737248 - 29737298
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| ||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  29737248 ccaataaaatctcaacctgaccggaaatcatggggtagtgggagttatgta 29737298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 37477079 - 37477133
Alignment:
Q  103 tgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||| || ||||||||||||||||||| |||||||| |||||| ||||||||||    
T  37477079 tgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatat 37477133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 3962048 - 3961991
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || || |||||||||||||||  ||||||||||||||| ||||||||||    
T  3962048 gggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 3961991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 15329350 - 15329285
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || || |||||||||||| ||  ||||||||||||||| ||||||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 15329285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 24395029 - 24394984
Alignment:
Q  112 tgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  24395029 tgccatgtcattcttaaaattttcttgataaaatctttcttgatat 24394984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 36790474 - 36790519
Alignment:
Q  112 tgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||    
T  36790474 tgccatgtcattcttaaatttttcttgataaaaactttcttgatat 36790519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 48880915 - 48880980
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || || |||||||||||| ||  ||||||||||||||| ||||||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 48880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 35444667 - 35444714
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttat 55  Q
    |||| |||||||||||||| ||| |||||||||| |||||||||||||    
T  35444667 ccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttat 35444714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 36790336 - 36790273
Alignment:
Q  104 gattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||| ||||| |||||||||||| ||||||| ||||||||| |||| ||||||| || ||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcatttt 36790273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 15329387 - 15329429
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttat 55  Q
    |||||||||| ||| |||||||||||||||||||| |||||||    
T  15329387 aaaatctcagactggccggaaatcatggggtggtgagtgttat 15329429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 34482944 - 34482993
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||| ||| ||||||||||| |||||||||||||||||||    
T  34482944 ccaataaaatctcagtctggccggaaatcat-gggtggtgggtgttatgta 34482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 37477016 - 37476986
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  37477016 ccggaaatcatggggtggtgggtgttatgta 37476986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 25167838 - 25167903
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| || ||||| || ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  25167838 aaatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 25167903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 29737216 - 29737151
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || | ||||||||||||||||  |||||| | |||||| ||||||||||    
T  29737216 aaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 29737151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 35444635 - 35444570
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  |||||||| |||||| ||||| ||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatat 35444570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 5e-40; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 9293532 - 9293372
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||||||| ||||||    
T  9293532 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtga 9293433  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    || ||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  9293432 ttattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 9293372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 23268018 - 23267859
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  23268018 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 23267919  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  23267918 tattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 23267859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 33380316 - 33380475
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnna-tgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||         | |||||| |||||||||||||||||||||||  ||||||    
T  33380316 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgat 33380415  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  33380416 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 33380475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 35160866 - 35161027
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaaggttaataaatgagactgaaatctatgggtg 104  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||            ||||||| |||||||||||||||||||||||  ||||    
T  35160866 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtg 35160965  T
Q  105 attgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||| |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  35160966 attattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 35161027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 31174790 - 31174633
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||         ||||||| ||||||||||||| |||||||||  || | ||    
T  31174790 ccaataaaatctcagtctgaccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggagttt 31174691  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcattt 166  Q
     ||||| |||||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  31174690 attgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 10661996 - 10662156
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||||||||           ||||||| |||||||||||||||||||||||  |||||    
T  10661996 ccaataaaatctcagcctggccggaaatcatagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtga 10662095  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    || ||||| |||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  10662096 ttattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 10662156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 9723519 - 9723675
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtgattgtt 110  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||           |||||| || ||||||| |||||||||||||  ||||||| ||    
T  9723519 aaaatctcagcctcaccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaaagtgaataaataagactgaaatctaaaggtgattatt 9723618  T
Q  111 gtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     || |||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  9723619 ctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacatttt 9723675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 7475464 - 7475305
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  7475464 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 7475365  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | || || ||| |||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  7475364 tattatgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 7475305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 3989185 - 3989342
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||| ||    
T  3989185 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttat 3989284  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatt 165  Q
    | ||||| ||||||||||||  ||||||||| |||||||||||||||||||||| ||||    
T  3989285 tattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 22592880 - 22592986
Alignment:
Q  68 atgaaaggttaataaatgagactgaaa--tctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatt 165  Q
    ||||||||||||||||| |||||||||  |||| |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  166 tttcttt 172  Q
    || ||||    
T  22592980 ttccttt 22592986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 13354955 - 13355121
Alignment:
Q  8 ccaagaaaatctc-agcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtg 104  Q
    |||| |||||||| |||||| ||||||||||||| |||||||||||||||||           ||||||| |||||||||||||||||||||||   |||    
T  13354955 ccaataaaatctctagcctggccggaaatcatggagtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaagtg 13355054  T
Q  105 attgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    ||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||| |||||| ||||    
T  13355055 attattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttccttt 13355121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 43331092 - 43331180
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||||||||||||||||  ||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatttt 43331180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 16767357 - 16767285
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgat 140  Q
    ||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||| |||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 21936190 - 21936325
Alignment:
Q  8 ccaagaaaatctc-agcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||||||||          ||||||| ||||||||||| |||||||||||  |||||    
T  21936190 ccaataaaatctctagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtga 21936289  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgata 141  Q
    || ||||||||||||||||||  ||| |||||||||    
T  21936290 ttattgtgccatgtcattcttggatcattcttgata 21936325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 21393570 - 21393481
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttc 169  Q
    |||||||||||||||||| || |||||||| ||||| |||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgat-aaatcattcttgatatctagcatttttc 21393481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcat 148  Q
    ||||||||||||||||||||| ||||||||  |||| ||||||||| ||||||||||||||||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 10661964 - 10661899
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 10661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 14941354 - 14941419
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| |||||||||| |||||||| ||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatat 14941419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 27847746 - 27847791
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  27847746 aaaatctcagcctgaccagaaatcatggggtggtgggtgttatgta 27847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 35160834 - 35160769
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 35160769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 34321042 - 34320994
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattctt 126  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattctt 34320994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 40262692 - 40262642
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  40262692 ccaataaaatctcaccctgaccggaaattatggggtggtgggtgttatgta 40262642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 9293564 - 9293629
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatat 9293629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 14941317 - 14941201
Alignment:
Q  14 aaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn----atgaaaggttaataaatgagactgaaatctatgggtgattgt 109  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||             ||||||||||||||||| ||| ||||||||| || ||||| |    
T  14941317 aaatctcagcctggccagaaatcatgaggtggtgggtgttatgtattttttttattttatgaaaggttaataaataagattgaaatctaaggatgattat 14941218  T
Q  110 tgtgccatgtcattctt 126  Q
    |||| ||||||||||||    
T  14941217 tgtgtcatgtcattctt 14941201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 31174822 - 31174902
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    ||||||| |||||||| || ||||||||||||||| ||  |||||| |||||||| |||||||||| || |||| ||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacattgttcttt 31174902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 16767428 - 16767378
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||| ||| ||||||||||| |||||||||||||||||||    
T  16767428 ccaataaaatctcagtctggccggaaatcatagggtggtgggtgttatgta 16767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 9723474 - 9723417
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || || ||||||||||||||||||||||| |||||||| ||||| ||||    
T  9723474 gggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatat 9723417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 21393676 - 21393741
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || | ||||||||||||||||| |||||||| |||||  ||||||||||    
T  21393676 aaatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatat 21393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 21936158 - 21936093
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || |||||| |||||||| ||  ||||||||||||||| ||||||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 21936093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 23268050 - 23268115
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  |||||||| |||||| ||||||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 23268115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 33380284 - 33380219
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| ||  |||||||||||||||||  |||||||| |||||| ||||||||||    
T  33380284 aaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 33380219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 43330989 - 43330924
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||| ||| |||| |||||| ||||||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatat 43330924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 21393624 - 21393594
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  21393624 ccggaaatcatggggtggtgggtgttatgta 21393594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 27847791 - 27847829
Alignment:
Q  129 atctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  27847791 atctttcttgataaaattattcttgatatctagcatttt 27847829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 43331041 - 43331071
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  43331041 ccggaaatcatggggtggtgggtgttatgta 43331071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 3989153 - 3989104
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgata 141  Q
    ||||||| |||||||| || ||||||||||||||||||  ||||||||||    
T  3989153 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgata 3989104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 13354923 - 13354858
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||| ||| || |||||| |||||||| ||  ||||||||||||||| ||||||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||  ||||||| || || |||||||||||| |||||||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 22591591 - 22591639
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatg 56  Q
    |||| |||||||||||||  | ||||||||||||||||||||| |||||    
T  22591591 ccaataaaatctcagcctagcaggaaatcatggggtggtgggtattatg 22591639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 51737614 - 51737778
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  51737614 ccaataaaatctcagcctgaccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 51737713  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||| ||||    
T  51737714 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttt 51737778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 40215097 - 40215256
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||  |||||||||||||||||||||||  ||||||    
T  40215097 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgat 40215196  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  40215197 tattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 40215256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 19015513 - 19015672
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  19015513 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgat 19015612  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||| ||| |||||| ||||||||||||||||||| || ||||||    
T  19015613 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatgtagcatttt 19015672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 25463785 - 25463944
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| ||||||||||||||| |||||||  ||||||    
T  25463785 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgat 25463884  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||    
T  25463885 tattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 25463944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 44094807 - 44094965
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  44094807 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatctaaaggtgatt 44094906  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     ||||| ||||||||||||  ||||||||| ||||||| |||||||||||||| ||||||    
T  44094907 attgtgtcatgtcattcttggatctttctt-ataaaataattcttgatatctagcatttt 44094965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 41876398 - 41876234
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  41876398 ccaataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 41876299  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    | |||||| ||||||||||| ||| |||||| |||||||||||||||||||||| |||||| ||||    
T  41876298 tattgtgctatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttt 41876234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 6883596 - 6883755
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  |||||     
T  6883596 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaa 6883695  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | || ||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  6883696 tattatgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 6883755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 36966664 - 36966505
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  36966664 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 36966565  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||||||||| |||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  36966564 tattgtgccatgttattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 36966505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 37821790 - 37821631
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||| ||||||||||||| |||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  37821790 ccaataaaatctcagcctggccgaaaatcatggggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 37821691  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||| |||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  37821690 tattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 37821631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 20305087 - 20304922
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctatgggtga 105  Q
    |||| ||||||||||| || ||| |||||||||| ||||||||||||||||           ||||||| || ||||||||||||||||||||  |||||    
T  20305087 ccaataaaatctcagcttggccgaaaatcatgggatggtgggtgttatgtatttttttttttatgaaagattgataaatgagactgaaatctaaaggtga 20304988  T
Q  106 ttgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    || |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||||    
T  20304987 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccttt 20304922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 18404618 - 18404716
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||| |||||||||||||||||||||||   |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcatttt 18404716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 33786516 - 33786422
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttctttg 173  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| |||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcctttg 33786422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 3559726 - 3559885
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgtta-tgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||| ||||         ||||||| |||||||||||||||||||| ||  ||||||    
T  3559726 ccaataaaatctcagcctgggcggaaatcatggggtggtgggtgttaatgtatttttttttatgaaagattaataaatgagactgaaatataaaggtgat 3559825  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||| ||| ||||||||  ||||||||| |||||||||||||||||||||| ||||||    
T  3559826 tattgtgtcatatcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 3559885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 32000151 - 32000063
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatttt 32000063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 44690914 - 44690813
Alignment:
Q  71 aaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttct 170  Q
    |||| ||||||||| |||||| |||||| |||||||| || ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttttct 44690815  T
Q  171 tt 172  Q
    ||    
T  44690814 tt 44690813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 40273888 - 40273979
Alignment:
Q  78 aataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttct 170  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||| |||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatttttct 40273979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 27523211 - 27523052
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||||||||||         |||||| |||||||||| ||||| ||||| | ||||||||    
T  27523211 ccaataaaatctcatcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaagttaataaataagactaaaatcaaagggtgatt 27523112  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
      | ||||||   |||||| |||||||||||||||||||||||||||||| || ||||||    
T  27523111 aatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacatttt 27523052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 25973542 - 25973675
Alignment:
Q  32 aaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatc 131  Q
    |||||||||||||||||||||||||||         ||||||| |||||||||||||||||||| ||  ||||||| ||||| |||||||||||| |||     
T  25973542 aaatcatggggtggtgggtgttatgtatttttttt-atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatt 25973640  T
Q  132 tttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||| |||||||||||||||||||||| ||||||    
T  25973641 tttctt-ataaaatcattcttgatatctagcatttt 25973675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 9910249 - 9910088
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaaggttaataaatgagactgaaatctatgggtg 104  Q
    |||| ||||||||||  || ||||||||||||||||||||||||||||| |            ||||||| ||||||||| || ||||||||||  ||||    
T  9910249 ccaataaaatctcagtatggccggaaatcatggggtggtgggtgttatgcatcttttttttttatgaaagattaataaataagtctgaaatctaaaggtg 9910150  T
Q  105 attgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    ||| |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  9910149 attattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacatttt 9910088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 33786631 - 33786696
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcattt 166  Q
    |||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  33786631 gggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 19722970 - 19722896
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||  ||||||| ||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 19722896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 52064426 - 52064374
Alignment:
Q  115 catgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    |||||||||||| |||||||||||||||||||||| |||||||||| ||||||    
T  52064426 catgtcattcttgaatctttcttgataaaatcatttttgatatctagcatttt 52064374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 16045786 - 16045851
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 16045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 25463753 - 25463688
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatat 25463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 40215065 - 40215000
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 40215000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatt 165  Q
    ||||||| |||||||| || || |||||||||||| ||| |||||||| |||||| ||||||||||||| ||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 3559686 - 3559614
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    |||||||| || ||||||||||||||||||  ||| ||||||||||| |||||||||| || |||| ||||||    
T  3559686 gggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattgttcttt 3559614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 10167577 - 10167673
Alignment:
Q  76 ttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    ||||||||| |||||||||||||  ||||||| ||||  ||| | |||||||||| ||| || |||||||||||||| |||| || |||||| ||||    
T  10167577 ttaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacattttccttt 10167673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 44690985 - 44690935
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||| ||| ||||||||||||||||| |||||||||||||    
T  44690985 ccaataaaatctcagtctggccggaaatcatggggtgttgggtgttatgta 44690935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 18404519 - 18404454
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||  ||||||| || | ||||||||||||||||  ||||||||||||||| ||||||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatat 18404454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 44094775 - 44094710
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||  ||||||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 44094710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 27523251 - 27523306
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgat 155  Q
    |||||||| || || |||||||||||||||| ||||||||||||||  ||||||||    
T  27523251 gggtgattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgat 27523306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 52329445 - 52329508
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctatgggtgattgttgtgccatgtcattcttaaatc 131  Q
    |||||| |||||||| | ||||||||||||| |||||||| || ||| ||||||||||| ||||    
T  52329445 atgaaacgttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 32000203 - 32000173
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  32000203 ccggaaatcatggggtggtgggtgttatgta 32000173  T

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Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 40273831 - 40273861
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  40273831 ccggaaatcatggggtggtgggtgttatgta 40273861  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 9910281 - 9910346
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| || ||||| || ||||||||||||||| ||  |||||||| |||||| ||||||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 9910346  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 32000255 - 32000320
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| ||||| || || || |||||||||||| ||| |||||||| |||||| ||||||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatat 32000320  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 41876438 - 41876495
Alignment:
Q  100 gggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    |||||||| || ||||||||||||||||||  ||| |||| |||||| ||||||||||    
T  41876438 gggtgattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatat 41876495  T

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Target: scaffold0096 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 41120 - 41278
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctatgggtgatt 107  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||  |||||||    
T  41120 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 41219  T
Q  108 gttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
     |||| |||| ||||||||  ||||||||| |||||||||||||||||||||| ||||||    
T  41220 attgtaccatatcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 41278  T

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Target: scaffold0096; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 41088 - 41023
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||| ||||||||||| ||||||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 41023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 12951 - 13114
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||          ||||||| |||||||||||||||||||||||  ||| ||    
T  12951 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaat 13050  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttctt 171  Q
    | ||||| |||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  13051 tattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttttctt 13114  T

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Target: scaffold0471; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 12919 - 12854
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| || ||||| || ||||||||||||||| ||  |||||||| |||||| ||||||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 12854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 4505 - 4664
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  4505 ccaataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgat 4604  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | ||||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  4605 tattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 4664  T

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Target: scaffold0204; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 4473 - 4408
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  |||||||| |||||| ||||||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 4408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 11730 - 11889
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||||||||| ||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  11730 ccaataaaatctcagcctggccgaaaatcatggggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 11829  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttt 167  Q
    | |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  11830 tattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatttt 11889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 11698 - 11633
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || || |||||||||||| ||  ||||||||||||||| ||||||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 11633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 75; Significance: 1e-34; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 26045 - 26209
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  26045 ccaataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 26144  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||| ||||    
T  26145 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttt 26209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 16093 - 16257
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctatgggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||  | ||||    
T  16093 ccaataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgat 16192  T
Q  107 tgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatatctatcatttttcttt 172  Q
    | |||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||| ||||    
T  16193 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttt 16257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 8511 - 8602
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta-nnnnnnnnnatgaaaggttaataaatgagactgaaatcta 98  Q
    |||| |||||||||| ||| |||||||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||    
T  8511 ccaataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatcta 8602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 3145 - 3080
Alignment:
Q  92 aaatctatgggtgattgttgtgccatgtcattcttaaatctttcttgataaaatcattcttgatat 157  Q
    ||||||| |||||||| || ||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatat 3080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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