View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18699_high_15 (Length: 267)
Name: NF18699_high_15
Description: NF18699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18699_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 7863153 - 7862919
Alignment:
| Q |
16 |
tgaacttgagactttgaaaatgaacatactctcagatcctaaaccaacaccatcaaaccaactcaaaccagttttaatgataagattatcgacatatctt |
115 |
Q |
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| T |
7863153 |
tgaacttgagactttaaaaatgaacatactctcagaccctaaatcaacaccatcaaaccaatccaaatcagttttaatgataagattatcgacatatctt |
7863054 |
T |
|
| Q |
116 |
ccttacatttgattccaagtccaaaaatgttaaccttttgggacggataaaggcatcctatgggcatatctagtaaagaaatcattcatccatattctat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7863053 |
ccttacatttgattccaagtccaaaaatgttaaccttttgggacggataaaggcatcctatgggcatatctagtaaagaaatcattcatccatattctat |
7862954 |
T |
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| Q |
216 |
aatcgacttgtcatcataatgacttttagaaaact |
250 |
Q |
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||| ||||||||||||||||||||||||||||||| |
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| T |
7862953 |
aattgacttgtcatcataatgacttttagaaaact |
7862919 |
T |
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