View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18700_high_16 (Length: 349)
Name: NF18700_high_16
Description: NF18700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18700_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 94 - 335
Target Start/End: Original strand, 25331195 - 25331436
Alignment:
| Q |
94 |
gataacaactgaatggccaaaagacaaggaattaaagtactccatttccactattagatacatcattttgttatgtttccaaaattaaggaatcccctag |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25331195 |
gataacaactgaatggccaaaagacaaggaattaaagtactccatttccactattagatacatcattttgttatgtttccaaaattaaggaatcccctag |
25331294 |
T |
|
| Q |
194 |
aaccttgtttcctcttccactaagtttaaagcaacattaagggaccatagcacaaagcatgcttaaatggttccgtaaataaaaacaaaaatttccccat |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25331295 |
aaccttgtttcctcttccactaagtttaaagcaacattaagggaccatagcacaaagcatgcttaaatggttccgtaaataaaaacaaaaatttccccat |
25331394 |
T |
|
| Q |
294 |
caatctaaaatcaacttaatagagacataacaaagaagaaca |
335 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
25331395 |
caatctaaaatcaacttaatagagacataacaaagaagaaca |
25331436 |
T |
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