View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18704_high_30 (Length: 374)

Name: NF18704_high_30
Description: NF18704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18704_high_30
NF18704_high_30
[»] chr4 (18 HSPs)
chr4 (157-358)||(4792669-4792870)
chr4 (1-78)||(29640026-29640103)
chr4 (1-78)||(50570573-50570650)
chr4 (1-78)||(42558114-42558191)
chr4 (1-78)||(36078715-36078792)
chr4 (1-75)||(29643325-29643399)
chr4 (1-78)||(40899635-40899712)
chr4 (3-78)||(5261406-5261481)
chr4 (4-78)||(10219131-10219205)
chr4 (1-78)||(26477744-26477821)
chr4 (1-78)||(48996534-48996611)
chr4 (1-55)||(52345162-52345216)
chr4 (1-78)||(8176163-8176240)
chr4 (1-62)||(6333776-6333837)
chr4 (1-78)||(31301845-31301921)
chr4 (1-62)||(52345296-52345357)
chr4 (1-57)||(32137147-32137203)
chr4 (1-68)||(30193541-30193608)
[»] chr7 (23 HSPs)
chr7 (1-78)||(3211757-3211834)
chr7 (1-78)||(11205993-11206070)
chr7 (1-78)||(47070059-47070136)
chr7 (1-78)||(8768281-8768358)
chr7 (1-78)||(10672210-10672287)
chr7 (1-78)||(12117991-12118068)
chr7 (1-78)||(32824041-32824118)
chr7 (1-78)||(42910232-42910309)
chr7 (1-62)||(47204088-47204149)
chr7 (1-78)||(47903674-47903751)
chr7 (1-78)||(13852761-13852838)
chr7 (1-78)||(43429623-43429700)
chr7 (1-78)||(10070008-10070085)
chr7 (1-78)||(31876197-31876274)
chr7 (1-78)||(36921107-36921184)
chr7 (1-78)||(22366895-22366972)
chr7 (20-78)||(5933092-5933150)
chr7 (1-67)||(18672782-18672848)
chr7 (1-78)||(24360846-24360921)
chr7 (1-78)||(31982222-31982299)
chr7 (11-78)||(36509097-36509164)
chr7 (1-78)||(27054278-27054356)
chr7 (30-78)||(1335884-1335932)
[»] chr6 (9 HSPs)
chr6 (1-78)||(12270937-12271014)
chr6 (1-78)||(5866633-5866710)
chr6 (4-78)||(35039489-35039563)
chr6 (1-78)||(10390591-10390668)
chr6 (4-63)||(10591296-10591355)
chr6 (1-62)||(33550778-33550839)
chr6 (4-78)||(25137602-25137675)
chr6 (4-62)||(15860185-15860243)
chr6 (1-78)||(10493942-10494019)
[»] chr5 (24 HSPs)
chr5 (1-78)||(666883-666960)
chr5 (1-78)||(11917836-11917913)
chr5 (1-78)||(27885698-27885775)
chr5 (1-78)||(38334366-38334443)
chr5 (4-78)||(15068860-15068934)
chr5 (1-78)||(8409367-8409444)
chr5 (1-78)||(30002379-30002456)
chr5 (1-78)||(701598-701675)
chr5 (1-78)||(2226434-2226511)
chr5 (4-78)||(42545839-42545913)
chr5 (1-78)||(12165494-12165571)
chr5 (1-77)||(9161435-9161511)
chr5 (1-78)||(12680626-12680703)
chr5 (1-78)||(32520776-32520853)
chr5 (1-62)||(332848-332909)
chr5 (1-78)||(10174510-10174586)
chr5 (1-78)||(36103162-36103239)
chr5 (1-78)||(36176440-36176517)
chr5 (1-78)||(36176671-36176748)
chr5 (1-78)||(38434140-38434217)
chr5 (17-78)||(23781175-23781236)
chr5 (17-78)||(23868128-23868189)
chr5 (17-78)||(35893485-35893546)
chr5 (1-29)||(30265393-30265421)
[»] chr3 (14 HSPs)
chr3 (1-78)||(35401785-35401862)
chr3 (1-78)||(4669208-4669285)
chr3 (1-78)||(10369642-10369719)
chr3 (1-78)||(51149283-51149360)
chr3 (1-78)||(33361344-33361421)
chr3 (1-62)||(34794955-34795016)
chr3 (2-78)||(6003944-6004020)
chr3 (1-78)||(48032692-48032769)
chr3 (1-62)||(32880756-32880817)
chr3 (2-78)||(27641773-27641849)
chr3 (1-78)||(35531713-35531790)
chr3 (4-62)||(50562158-50562216)
chr3 (1-78)||(21586403-21586475)
chr3 (1-29)||(43030867-43030895)
[»] chr2 (13 HSPs)
chr2 (1-78)||(9811771-9811848)
chr2 (1-78)||(16579021-16579098)
chr2 (1-78)||(20420809-20420886)
chr2 (1-78)||(36412912-36412989)
chr2 (1-78)||(11376336-11376413)
chr2 (1-62)||(44035764-44035825)
chr2 (2-78)||(44979326-44979402)
chr2 (1-78)||(19936676-19936753)
chr2 (3-62)||(42785097-42785156)
chr2 (1-78)||(25297807-25297884)
chr2 (1-78)||(18360255-18360332)
chr2 (1-37)||(17916450-17916486)
chr2 (18-78)||(34910781-34910841)
[»] chr8 (12 HSPs)
chr8 (1-78)||(5802507-5802584)
chr8 (1-78)||(14549678-14549755)
chr8 (1-77)||(44673179-44673255)
chr8 (4-78)||(30392537-30392611)
chr8 (1-78)||(3006188-3006260)
chr8 (1-60)||(3682368-3682427)
chr8 (1-78)||(36827343-36827420)
chr8 (5-75)||(18169586-18169655)
chr8 (5-75)||(18633152-18633221)
chr8 (3-43)||(36909934-36909974)
chr8 (30-78)||(33069071-33069119)
chr8 (1-75)||(6200490-6200564)
[»] scaffold0308 (1 HSPs)
scaffold0308 (1-75)||(5471-5545)
[»] chr1 (14 HSPs)
chr1 (1-62)||(8211671-8211732)
chr1 (1-62)||(5154964-5155025)
chr1 (1-62)||(20494126-20494187)
chr1 (1-78)||(45692246-45692323)
chr1 (3-78)||(33910327-33910402)
chr1 (4-62)||(29390137-29390195)
chr1 (1-78)||(29707697-29707769)
chr1 (1-77)||(39256187-39256263)
chr1 (1-75)||(51251984-51252058)
chr1 (4-63)||(33474899-33474958)
chr1 (1-78)||(24910604-24910681)
chr1 (5-78)||(44918985-44919058)
chr1 (1-62)||(32954529-32954590)
chr1 (1-78)||(16529042-16529119)
[»] scaffold0059 (2 HSPs)
scaffold0059 (1-75)||(69089-69163)
scaffold0059 (1-75)||(77195-77269)
[»] scaffold0013 (1 HSPs)
scaffold0013 (4-75)||(106493-106564)
[»] scaffold0029 (2 HSPs)
scaffold0029 (4-78)||(40125-40199)
scaffold0029 (4-78)||(47321-47395)


Alignment Details
Target: chr4 (Bit Score: 174; Significance: 2e-93; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 157 - 358
Target Start/End: Original strand, 4792669 - 4792870
Alignment:
Q  157 atgaatttaatagttaagagattaattttgatcgatagataagttcaactattcatatatggtcagtatggtttcgtgtatattttagcggttagaagat 256  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||||||||    
T  4792669 atgaatttaacagttaagagattaattttgatcgttagataagttcaactattcatatatggtcagcatggttgcgtatatattttagtggttagaagat 4792768  T
Q  257 ttatttcaatcattaagtcacagcgtaaaatcattggactgattaaacggttgatatgtgttgttcttattgggtagaagattagttttgatcgttggat 356  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4792769 ttatttcaatcattaagtcacaacgtaaaatcattggactgattaaacggttgatatgtgttgttcttattgggtagaagattagttttgatcgttggat 4792868  T
Q  357 tg 358  Q
    ||    
T  4792869 tg 4792870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29640026 - 29640103
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29640026 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 29640103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 50570650 - 50570573
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50570650 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 50570573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42558114 - 42558191
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  42558114 tgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatccgaaccaagtg 42558191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36078715 - 36078792
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36078715 tgctgagatgcaaactgcaaactgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 36078792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29643399 - 29643325
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaa 75  Q
    ||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  29643399 tgctgagatgcaagccacaaaccgaaccgaaccgcgcggttcagtttaaaagtcatccgaactcatccgaaccaa 29643325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40899712 - 40899635
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||| |||||||||||||||   |||||||||||||| |||||| |||||||||    
T  40899712 tgctgagatgcaaaccgcaaaccgaaccaaaccgcgcggttcagcgcaaaagtcatccgaattcatccgaaccaagtg 40899635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 5261481 - 5261406
Alignment:
Q  3 ctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| |||||| || ||||||    
T  5261481 ctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatctgaattcatccgaatcaagtg 5261406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 10219131 - 10219205
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||  |||| | |||||||||    
T  10219131 tgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcagtgtaaaagtcatccgagttcattcgaaccaagtg 10219205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26477821 - 26477744
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||  |||||||||||||| |||||| |||||||||    
T  26477821 tgctgagatgcaaaccgcaaaccaaaccgaaccgcacggtttagtacaaaagtcatccgaattcatccgaaccaagtg 26477744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48996534 - 48996611
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |  |||||||||||||| | |||| |||||||||    
T  48996534 tgctgagatgcaaaccgcaaatcaaaccgaaccgcgcggttcattgcaaaagtcatccgaattgatccgaaccaagtg 48996611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 52345162 - 52345216
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtca 55  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  52345162 tgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtca 52345216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8176240 - 8176163
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||  ||||||||| |||  |||||| |||||||||    
T  8176240 tgctgagatgcaaaccgcaaatcgaaccgaacgacgcggttcagtgcaaaagtcattcgagttcatccgaaccaagtg 8176163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6333776 - 6333837
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    |||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||||||| ||||    
T  6333776 tgctaagatgcaagccgcaaatcgaaccgaatcgcgcggttcagtgtaaaagtcatctgaac 6333837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31301845 - 31301921
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||| |||||  | ||||||||  |||||||||| ||| |||||| |||||||||    
T  31301845 tgctgagatgcaaaccgcaaaccgaactgaaccatgtggttcagt-gaaaagtcatctgaattcatccgaaccaagtg 31301921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52345296 - 52345357
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||||||||||    
T  52345296 tgctgagatgcaaaccacaaaccgaaccgaaccatgcgattcagtacaaaagtcatccgaac 52345357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32137147 - 32137203
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatc 57  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |  ||||||||||    
T  32137147 tgctgagatgcaaaccgcaaaccaaaccgaaccgcacggttcattgcaaaagtcatc 32137203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30193608 - 30193541
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 68  Q
    ||||||||||||||| |||||| |||||||||||| ||||||| |  ||||||||| |||| ||||||    
T  30193608 tgctgagatgcaaactgcaaactgaaccgaaccgcacggttcattgcaaaagtcatacgaattcatcc 30193541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 7e-34; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3211834 - 3211757
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3211834 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 3211757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11206070 - 11205993
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11206070 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 11205993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47070059 - 47070136
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  47070059 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 47070136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8768358 - 8768281
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8768358 tgctgagatgcaaaccacaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 8768281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10672210 - 10672287
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  10672210 tgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatccgaaccaagtg 10672287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12117991 - 12118068
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12117991 tgctgagatgcaaatcgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 12118068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32824041 - 32824118
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||| ||||||||||||||||    
T  32824041 tgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagccatccgaattcatccaaaccaagtg 32824118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42910309 - 42910232
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| |||||| |||||||||    
T  42910309 tgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtgcaaaagtcatccgaattcatccgaaccaagtg 42910232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47204149 - 47204088
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47204149 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatctgaac 47204088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47903674 - 47903751
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||||||| |||||| |||||||||    
T  47903674 tgctgagatgcaaaccgcaaaccgaaacgaactgcgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtg 47903751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13852761 - 13852838
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||| |||||||||| | |||||||||  |||||||||||||| |||||| |||||||||    
T  13852761 tgctgagatgcaaaccgcaaacagaaccgaaccactcggttcagtgcaaaagtcatccgaattcatccgaaccaagtg 13852838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43429623 - 43429700
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||  |||||| |||  |||||||||||||| |||||| |||||||||    
T  43429623 tgctgagatgcaaaccgcaaaccgaaccgaaccatgcggtttagtgcaaaagtcatccgaattcatccgaaccaagtg 43429700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10070008 - 10070085
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||| |||||||||||| |||| | ||||||||||  |||||||||||||| |||||| |||||||||    
T  10070008 tgctgagatgcaaatcgcaaaccgaactgaactgtgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtg 10070085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31876274 - 31876197
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||| || |||||||| ||||||| |  |||||||||||||| |||||| || ||||||    
T  31876274 tgctgagatgcaaaccgcaaaccaaatcgaaccgcacggttcattgcaaaagtcatccgaattcatccgaatcaagtg 31876197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36921184 - 36921107
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||| ||||||| |||||||||||| |||||| |  |||||| ||||||| |||||| |||||||||    
T  36921184 tgctgagatgcaaactgcaaaccaaaccgaaccgcgtggttcaatgcaaaagtaatccgaattcatccgaaccaagtg 36921107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22366895 - 22366972
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||| ||||||||||||||||||||||| || ||| ||||| |||  |||||||||||||| |||||  |||||||||    
T  22366895 tgctaagatgcaaaccgcaaaccgaaccaaatcgcacggtttagtgcaaaagtcatccgaattcatctgaaccaagtg 22366972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 5933092 - 5933150
Alignment:
Q  20 aaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||  |||||||||| ||| | |||| |||||||||    
T  5933092 aaccgaaccgaaccgcgcggttcagtgcaaaagtcatctgaatttatccgaaccaagtg 5933150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18672848 - 18672782
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatc 67  Q
    |||||||||||||||| ||||||||||||||| ||||||| || |  |||| ||||||||| |||||    
T  18672848 tgctgagatgcaaaccacaaaccgaaccgaactgcgcggtccaatgcaaaaatcatccgaattcatc 18672782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24360921 - 24360846
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||| ||||||||  ||||||||||||| | | ||||| ||  |||||||||||||| ||||||||||||||||    
T  24360921 tgctgagacgcaaaccg--aaccgaaccgaactgtgtggttctgtgcaaaagtcatccgaattcatccaaaccaagtg 24360846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31982299 - 31982222
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||| |||||||||||||||| | |||| |||||||| |||||||  |||||||||| ||| |||||| || ||||||    
T  31982299 tgctaagatgcaaaccgcaaatcaaaccaaaccgcgcagttcagtgcaaaagtcatctgaattcatccgaatcaagtg 31982222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 36509097 - 36509164
Alignment:
Q  11 caaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||| ||||||||||| ||||||| |  |||||||||  ||| |||||| |||||||||    
T  36509097 caaaccgcaaaccaaaccgaaccgcacggttcaatgcaaaagtcatatgaattcatccgaaccaagtg 36509164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27054356 - 27054278
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc-aaaccaagtg 78  Q
    |||||| |||||||||||||||| |||| || ||| ||||| |||  |||||||||| ||| |||||| ||||||||||    
T  27054356 tgctgatatgcaaaccgcaaaccaaaccaaatcgcacggtttagtgcaaaagtcatctgaattcatccgaaaccaagtg 27054278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 1335884 - 1335932
Alignment:
Q  30 aaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||| |||  |||||||||| ||| ||||||||||||||||    
T  1335884 aaccgcgcggtttagtgcaaaagtcatctgaattcatccaaaccaagtg 1335932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 7e-34; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12270937 - 12271014
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12270937 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 12271014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5866710 - 5866633
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  5866710 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagacatccgaactcatccgaaccaagtg 5866633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 35039563 - 35039489
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||| |||||||||||||||   |||||||||||||| |||||| |||||||||    
T  35039563 tgagatgcaaaccgcaaaccgaaccaaaccgcgcggttcagcgcaaaagtcatccgaattcatccgaaccaagtg 35039489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10390668 - 10390591
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||  ||| |||||| |||||||||    
T  10390668 tgctgagatgcaaaccgcaaatcgaaccgaaccgcgcggttcagtgcaaaagtcatttgaattcatccgaaccaagtg 10390591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 10591296 - 10591355
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaact 63  Q
    ||||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  10591296 tgagacgcaaaccgcaaaccgaatcgaaccgcgcggttcagtgcaaaagtcatccgaact 10591355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33550778 - 33550839
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    |||||||||||||||||||||||||||| ||||||||||||||||  |||||| ||| ||||    
T  33550778 tgctgagatgcaaaccgcaaaccgaaccaaaccgcgcggttcagtgcaaaagtaatctgaac 33550839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 25137602 - 25137675
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||| ||||||| || |||| ||||||||||||||||  |||||||||||||| |||||| |||||||||    
T  25137602 tgagatgcataccgcaa-ccaaaccaaaccgcgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtg 25137675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 15860185 - 15860243
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    |||| ||||||| ||||||| || |||||||| ||||||||| ||||||||||||||||    
T  15860185 tgaggtgcaaactgcaaaccaaatcgaaccgcacggttcagtgtaaaagtcatccgaac 15860243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10494019 - 10493942
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||| |||||||||| |||||  | |||||||||  ||||||||| | || | |||| |||||||||    
T  10494019 tgctgagatgcaaactgcaaaccgaatcgaactacacggttcagtgcaaaagtcattcaaatttatccgaaccaagtg 10493942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 666960 - 666883
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  666960 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 666883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11917836 - 11917913
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11917836 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggtttagtctaaaagtcatccgaactcatccaaaccaagtg 11917913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27885775 - 27885698
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27885775 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 27885698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38334443 - 38334366
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38334443 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 38334366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 15068860 - 15068934
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15068860 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 15068934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8409367 - 8409444
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  8409367 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcgattcagtctaaaagtcatccgaactcatccgaaccaagtg 8409444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30002379 - 30002456
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  30002379 tgctgagatgtaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaaatcatccgaactcatccgaaccaagtg 30002456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 701598 - 701675
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||| |||||||||    
T  701598 tgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggtttagtctaaaagtcatccaaactcatccgaaccaagtg 701675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2226511 - 2226434
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||  |||||||||||||| |||||| |||||||||    
T  2226511 tgctgagatgcaaaccgcaaaccgaactgaaccgcgcggttaagtgcaaaagtcatccgaattcatccgaaccaagtg 2226434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 42545839 - 42545913
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||| |||||| |||||||||    
T  42545839 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggtttagtgcaaaagtcatctgaattcatccgaaccaagtg 42545913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12165571 - 12165494
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||  |||||||||||||| |||||| |||||||||    
T  12165571 tgctgagatgcaaactgcaaaccgaaccgaaccatgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtg 12165494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9161435 - 9161511
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagt 77  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||  |||||||||| ||| |||||| ||||||||    
T  9161435 tgctgagattcaaaccgcaaaccgaaccgaaccgcacggttcagtgcaaaagtcatctgaattcatccgaaccaagt 9161511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12680703 - 12680626
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||| |||| |||||||||||||| |  |||||||||||||| |||||  |||||||||    
T  12680703 tgctgagatgcaaaccgcaaaccaaaccaaaccgcgcggttcattgcaaaagtcatccgaattcatctgaaccaagtg 12680626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32520853 - 32520776
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||| | |||||||| ||||||||||||||||||| |  |||||||||||||| |||||| |||||||||    
T  32520853 tgctgagatgcagatcgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatccgaaccaagtg 32520776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 332909 - 332848
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||  ||||||| |||||||    
T  332909 tgctgagatgcaaaccgcaaaccaaaccgaactgcgcggttcagtgcaaaagtcgtccgaac 332848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10174510 - 10174586
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||  |||||||||||||| |||||| || ||||||    
T  10174510 tgctgagatgcaaaccgcaaatcgaaca-aaccgcgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtg 10174586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36103239 - 36103162
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||  |||||| || ||||||||||||||||||  |||||||||| ||| |||||| |||||||||    
T  36103239 tgctgagatgcaaactacaaaccaaaacgaaccgcgcggttcagtgcaaaagtcatctgaattcatccgaaccaagtg 36103162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36176517 - 36176440
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||| | |||||||  |||||| |||  |||||||||||||| |||| | |||||||||    
T  36176517 tgctgagatgcaaaccgcaaaccaacccgaaccatgcggtttagtgcaaaagtcatccgaattcattcgaaccaagtg 36176440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36176748 - 36176671
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||| | |||||||  |||||| |||  |||||||||||||| |||| | |||||||||    
T  36176748 tgctgagatgcaaaccgcaaaccaacccgaaccatgcggtttagtgcaaaagtcatccgaattcattcgaaccaagtg 36176671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38434140 - 38434217
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||| ||||||||||| | ||||||||| | |||||||||  ||||||||||| || ||||| ||||||||||    
T  38434140 tgctgagatacaaaccgcaaatcaaaccgaacctcacggttcagtgcaaaagtcatccaaattcatctaaaccaagtg 38434217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 23781175 - 23781236
Alignment:
Q  17 gcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||| |||||||  |||||||||| ||| |||||| | |||||||    
T  23781175 gcaaaccgaaccgaaccgcgcagttcagtgcaaaagtcatctgaaatcatccgatccaagtg 23781236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 23868128 - 23868189
Alignment:
Q  17 gcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||| |||||||  |||||||||| ||| |||||| | |||||||    
T  23868128 gcaaaccgaaccgaaccgcgcagttcagtgcaaaagtcatctgaaatcatccgatccaagtg 23868189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 35893485 - 35893546
Alignment:
Q  17 gcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||| ||||||| |||||||| ||||||  |||||||||||||| |||||| |||||||||    
T  35893485 gcaaatcgaaccggaccgcgcgattcagtacaaaagtcatccgaattcatccgaaccaagtg 35893546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 30265421 - 30265393
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccg 29  Q
    |||||||||||||||||||||||||||||    
T  30265421 tgctgagatgcaaaccgcaaaccgaaccg 30265393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35401862 - 35401785
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35401862 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 35401785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4669285 - 4669208
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4669285 tgctgagatgcaaatcgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 4669208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10369642 - 10369719
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  10369642 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaattcatccgaaccaagtg 10369719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51149360 - 51149283
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51149360 tgctgagatgcaaaccgtaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 51149283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33361344 - 33361421
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33361344 tgctgagatgcaaaccgcaaactgaactaaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 33361421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34794955 - 34795016
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34794955 tgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaac 34795016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 6004020 - 6003944
Alignment:
Q  2 gctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||| |||| |||||||||||  |||||||||||||| |||||| |||||||||    
T  6004020 gctgagatgcaaaccgcaaaccgaaccaaacctcgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtg 6003944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 48032769 - 48032692
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |  |||||||||||||| |||||  |||||||||    
T  48032769 tgctgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatctgaaccaagtg 48032692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32880756 - 32880817
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||  |||||||||||||||    
T  32880756 tgctgagatgcaaaccgtaaaccaaaccgaactgcgcggttcagtgcaaaagtcatccgaac 32880817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 27641849 - 27641773
Alignment:
Q  2 gctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||| || | |||| |||||||||||  |||||||||| ||| |||||| |||||||||    
T  27641849 gctgagatgcaaaccgcaaaccaaatcaaaccacgcggttcagtgcaaaagtcatctgaattcatccgaaccaagtg 27641773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35531790 - 35531713
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||  |||||||| | ||| |||||| |||||||||    
T  35531790 tgctgagatgcaaactgcaaatcgaactgaaccgtgcggttcagtgcaaaagtcacctgaattcatccgaaccaagtg 35531713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 50562216 - 50562158
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    ||||||||||| |||||| ||||||||| ||| || |||||| ||||||||||||||||    
T  50562216 tgagatgcaaatcgcaaatcgaaccgaatcgcacgattcagtgtaaaagtcatccgaac 50562158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21586475 - 21586403
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||| |||||||||     ||||||||||| |||  ||||||||||| || |||||| |||||||||    
T  21586475 tgctgagatgcaaactgcaaaccga-----accgcgcggtttagtgcaaaagtcatccaaattcatccgaaccaagtg 21586403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 43030867 - 43030895
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccg 29  Q
    |||||||||||||||||||||||||||||    
T  43030867 tgctgagatgcaaaccgcaaaccgaaccg 43030895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 7e-34; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9811771 - 9811848
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9811771 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 9811848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16579021 - 16579098
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16579021 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 16579098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20420809 - 20420886
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20420809 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 20420886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36412989 - 36412912
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  36412989 tgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatccgaaccaagtg 36412912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11376336 - 11376413
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| ||| |||||| |||||||||    
T  11376336 tgctgagatgcaaactgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatctgaattcatccgaaccaagtg 11376413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44035764 - 44035825
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||  |||||||||||||||    
T  44035764 tgctgagatgcaaaccgtaaaccaaaccgaaccgcgcggttcagtgcaaaagtcatccgaac 44035825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 44979402 - 44979326
Alignment:
Q  2 gctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||| || | ||||||||||||||||  |||| ||||||||| |||||| |||||||||    
T  44979402 gctgagatgcaaaccgcaaaccaaatcaaaccgcgcggttcagtgcaaaattcatccgaattcatccgaaccaagtg 44979326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19936753 - 19936676
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||  ||||| |||| ||| |||||| |||||||||    
T  19936753 tgctgagatacaaactgcaaaccgaaccgaaccgcgcagttcagtgaaaaagacatctgaattcatccgaaccaagtg 19936676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 42785156 - 42785097
Alignment:
Q  3 ctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    ||||||||||||||||||||| |||||||||||| |||||| |  |||||||||||||||    
T  42785156 ctgagatgcaaaccgcaaaccaaaccgaaccgcgtggttcaatgcaaaagtcatccgaac 42785097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25297884 - 25297807
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||| |||||| |||||||||| ||||||||    |||||||||||||| |||||| || ||||||    
T  25297884 tgctgagatgcaaaccacaaaccaaaccgaaccgtgcggttcaaagcaaaagtcatccgaattcatccgaatcaagtg 25297807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18360255 - 18360332
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||| | ||||| |||||||||||| |||||| |  ||||||||| |||| | |||| |||||||||    
T  18360255 tgctgagatgcaaactgtaaaccaaaccgaaccgcgtggttcaatgcaaaagtcattcgaatttatccgaaccaagtg 18360332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 17916486 - 17916450
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgc 37  Q
    |||||||||||||||| |||||| |||||||||||||    
T  17916486 tgctgagatgcaaaccacaaaccaaaccgaaccgcgc 17916450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 34910781 - 34910841
Alignment:
Q  18 caaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||| ||||||||| | |  |||||||||| ||| |||||| |||||||||    
T  34910781 caaaccgaaccgaaacgcgcggtttattgcaaaagtcatctgaattcatccgaaccaagtg 34910841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5802584 - 5802507
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  5802584 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatctgaactcatccgaaccaagtg 5802507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14549678 - 14549755
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| |||||||||    
T  14549678 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtg 14549755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 44673179 - 44673255
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagt 77  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||| |||||| ||||||||    
T  44673179 tgctgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcagtgcaaaagtcatccgaattcatccgaaccaagt 44673255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 30392537 - 30392611
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||| |||||||||||| ||||| ||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  30392537 tgagatacaaaccgcaaactgaaccaaaccgcgcggttcagtaaaaaagtcatccgaattcatccaaaccaagtg 30392611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3006260 - 3006188
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||     ||||||||||||||||||| |||||||||||||| |||||||||    
T  3006260 tgctgagatgcaaaccgcaaaccgaaccg-----cgcggttcagtctaaaagtaatccgaactcatccgaaccaagtg 3006188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3682368 - 3682427
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccga 60  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||  |||||||||||||    
T  3682368 tgctgagatgcaaaccgcaaaccaaaccaaaccgcgcggttcagtggaaaagtcatccga 3682427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36827420 - 36827343
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||  ||||||||| |||| ||| || |||||||||    
T  36827420 tgctgagatgcaaaccgcaaaccgaaccaaaccgtgtggttcagtgcaaaagtcattcgaattcagccgaaccaagtg 36827343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 18169655 - 18169586
Alignment:
Q  5 gagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaa 75  Q
    ||||||||||||||||||| ||||||||| |||||||||||  |||||| ||||||| |||||| ||||||    
T  18169655 gagatgcaaaccgcaaaccaaaccgaaccacgcggttcagtgcaaaagtaatccgaa-tcatccgaaccaa 18169586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 18633221 - 18633152
Alignment:
Q  5 gagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaa 75  Q
    ||||||||||||||||||| ||||||||| |||||||||||  |||||| ||||||| |||||| ||||||    
T  18633221 gagatgcaaaccgcaaaccaaaccgaaccacgcggttcagtgcaaaagtaatccgaa-tcatccgaaccaa 18633152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 36909974 - 36909934
Alignment:
Q  3 ctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttca 43  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  36909974 ctgagatgcaaaccgcaaaccgaaccgaaccgcgcagttca 36909934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 33069071 - 33069119
Alignment:
Q  30 aaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||| ||||||||  |||||||||||||| ||||||||||||||||    
T  33069071 aaccgcgtggttcagtgcaaaagtcatccgaaatcatccaaaccaagtg 33069119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6200564 - 6200490
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaa 75  Q
    |||| |||||||||||  |||||||||  |||||| || ||||||  |||||||||||||| |||||| ||||||    
T  6200564 tgctaagatgcaaaccaaaaaccgaacgaaaccgcacgattcagtgcaaaagtcatccgaattcatccgaaccaa 6200490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 5545 - 5471
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaa 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5545 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcattcgaactcatccgaaccaa 5471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8211671 - 8211732
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8211671 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 8211732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5155025 - 5154964
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5155025 tgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtctaaaagtcatccgaac 5154964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20494126 - 20494187
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  20494126 tgctgagatgcaaacagcaaatcgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 20494187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 45692246 - 45692323
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| || |||||| |||||||||    
T  45692246 tgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccaaattcatccgaaccaagtg 45692323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 33910402 - 33910327
Alignment:
Q  3 ctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||| || |||||| |||||||||    
T  33910402 ctgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcagtgcaaaagtcatccaaattcatccgaaccaagtg 33910327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 29390137 - 29390195
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29390137 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatccgaac 29390195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29707769 - 29707697
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||| |||||||||    
T  29707769 tgctgagatgcaaaccgcaaaccgaaccgt-----gcggttcagtctaaaagtcatccgaactcatccgaaccaagtg 29707697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39256263 - 39256187
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagt 77  Q
    |||||||||||||||||||||||||||| |||||||| |||||||  ||||||||||| || |||||| ||||||||    
T  39256263 tgctgagatgcaaaccgcaaaccgaaccaaaccgcgcagttcagtgcaaaagtcatccaaattcatccgaaccaagt 39256187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 51252058 - 51251984
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaa 75  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |  |||||||||||||| |||||| ||||||    
T  51252058 tgctgagatgcaaaccgcaaaccaaaccgaactgcgcggttcattgcaaaagtcatccgaattcatccgaaccaa 51251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 33474899 - 33474958
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaact 63  Q
    ||||||||||| | ||||||||||||||||||||||||||||  ||||||||||||||||    
T  33474899 tgagatgcaaatcacaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatccgaact 33474958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24910681 - 24910604
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    |||||||||||||||| ||||| ||||||||| || ||||||| |  |||||||||||||| |||||| |||||||||    
T  24910681 tgctgagatgcaaaccacaaactgaaccgaactgcacggttcaatgcaaaagtcatccgaattcatccgaaccaagtg 24910604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 44918985 - 44919058
Alignment:
Q  5 gagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||| |||| |||||||| |||||||  |||||| ||||||| ||||||||| ||||||    
T  44918985 gagatgcaaaccgcaaaccaaaccaaaccgcgcagttcagtgcaaaagttatccgaattcatccaaatcaagtg 44919058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32954529 - 32954590
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaac 62  Q
    |||||||||||||||||| |||||||| |||||| |||||| |||  |||||||||||||||    
T  32954529 tgctgagatgcaaaccgcgaaccgaacggaaccgtgcggtttagtgcaaaagtcatccgaac 32954590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16529119 - 16529042
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||||||||||||||| ||  |||||||| |||| |||||||  ||||| |||||||| |||| | |||||||||    
T  16529119 tgctgagatgcaaaccgcatactaaaccgaactgcgctgttcagtgcaaaagccatccgaattcatacgaaccaagtg 16529042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 69163 - 69089
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaa 75  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |  |||||||||||||| |||||||||||||    
T  69163 tgctgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatccaaaccaa 69089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 77269 - 77195
Alignment:
Q  1 tgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaa 75  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |  |||||||||||||| |||||||||||||    
T  77269 tgctgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatccaaaccaa 77195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 106493 - 106564
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaa 75  Q
    |||||||||||||||||||| ||||||||||||||||||| |  |||||||||||||| |||||| ||||||    
T  106493 tgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatccgaaccaa 106564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 40199 - 40125
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||| ||||| |||||| |||||| || |||||||||||  |||||||||||||| |||||| |||||||||    
T  40199 tgagatgaaaaccacaaaccaaaccgagccacgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtg 40125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 47395 - 47321
Alignment:
Q  4 tgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccaaaccaagtg 78  Q
    ||||||| ||||| |||||| |||||| ||  ||||||||||  |||||||||||||| |||||| |||||||||    
T  47395 tgagatgaaaaccacaaaccaaaccgagccatgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtg 47321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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