View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18704_high_54 (Length: 250)
Name: NF18704_high_54
Description: NF18704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18704_high_54 |
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Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 48672437 - 48672676
Alignment:
| Q |
1 |
tcttctaggaacccttggcttgactgcattgatgcataccctgcttctctcaattaaaaagcacttttattattatgatcaatctatgatattgatcagt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48672437 |
tcttctaggaacccttggcttgactgcattgatgcataccctgcttctctcaattaaaaagcacttttattattatgatcaatctatgatattgatcagt |
48672536 |
T |
|
| Q |
101 |
gatgatgattatgaaattaagacttatttaggatatgaaataatggtagttttagttaagttggtgttttaaattttaattcctggcttgtgatattgca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48672537 |
gatgatgattatgaaattaagacttatttaggatatgaaataatggtagttttagttaagttggtgttttaaattttaattcctggcttgtgatattgca |
48672636 |
T |
|
| Q |
201 |
tactgttacactgaggcatatataacatcatgtgcctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
48672637 |
tactgttacactgaggcatatataacatcatgtgcctttg |
48672676 |
T |
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