View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18704_low_62 (Length: 246)
Name: NF18704_low_62
Description: NF18704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18704_low_62 |
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Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 2272022 - 2271799
Alignment:
| Q |
18 |
ctcatcccataaaatcaaaccagaaacgcaggaagccagtaaatacaaaagcattacataccacattatttttgcaccgattctaaacttgagataataa |
117 |
Q |
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| T |
2272022 |
ctcatcccataaaatcaaaccagaaacgcaggaagccagtaaatacaaaagcattacataccacattatttttgcaccgattctaaacttgagataataa |
2271923 |
T |
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| Q |
118 |
gtcattacttaccacattacaccaacattgtaactactttaattatgaacattttagttggtgtaaaatcccctctgtagaagaacaatattcatcttaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2271922 |
gtcattacttaccacattacaccaacattgtaactactttaattatgaacattttagttggtgtaaaatcccctctgtagaagaacaatattcatcttaa |
2271823 |
T |
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| Q |
218 |
atttcagcattgaattcatctcac |
241 |
Q |
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||||||||||||||||||| |||| |
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| T |
2271822 |
atttcagcattgaattcatttcac |
2271799 |
T |
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