View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18706_high_5 (Length: 440)
Name: NF18706_high_5
Description: NF18706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18706_high_5 |
 | |
|
| [»] scaffold0087 (7 HSPs) |
| | |
|
| [»] scaffold0127 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0087 (Bit Score: 345; Significance: 0; HSPs: 7)
Name: scaffold0087
Description:
Target: scaffold0087; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 10 - 422
Target Start/End: Original strand, 3920 - 4332
Alignment:
| Q |
10 |
attatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaagat |
109 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| || |||| | || ||||||||||| |
|
|
| T |
3920 |
attatactaaagaattgcgaggtaagttagattcttcaatatgtgaactgaaacatcttacttctttaaatctttatcgtaacaacttagaaggaaagat |
4019 |
T |
|
| Q |
110 |
tccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaat |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4020 |
tccaaagtgcattggttcacttgataagttgatagagttgaatcttggttataactattttgatggtgtcattcctcctagtctagggaacctttccaat |
4119 |
T |
|
| Q |
210 |
ttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttcat |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |
|
|
| T |
4120 |
ttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatttatcat |
4219 |
T |
|
| Q |
310 |
atgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagacaa |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
4220 |
atgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaacttcatttatatgtttgtgggctccatcaagtcaa |
4319 |
T |
|
| Q |
410 |
tcctaaatccatt |
422 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4320 |
tcctaaatccatt |
4332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0087; HSP #2
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 10 - 422
Target Start/End: Original strand, 28766 - 29175
Alignment:
| Q |
10 |
attatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaagat |
109 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28766 |
attatactaaagaattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctcaatggtaatcaatttgaaggaaagat |
28865 |
T |
|
| Q |
110 |
tccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaat |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
28866 |
tccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaatcattttgttggtgtcattcctcctagtttggggaacctttccaat |
28965 |
T |
|
| Q |
210 |
ttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttcat |
309 |
Q |
| |
|
||||||||||||||||| ||| |||||| | ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
28966 |
ttacaaactcttgacctttcatctaattat---gatatgatttcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctatcaa |
29062 |
T |
|
| Q |
310 |
atgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagacaa |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
29063 |
atgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttatctatctgaactttatttatatggttgtgggctccatcaagtcaa |
29162 |
T |
|
| Q |
410 |
tcctaaatccatt |
422 |
Q |
| |
|
||||||||||||| |
|
|
| T |
29163 |
tcctaaatccatt |
29175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0087; HSP #3
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 28 - 418
Target Start/End: Original strand, 11402 - 11789
Alignment:
| Q |
28 |
gaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaagattccaaagtgcattggttc |
127 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11402 |
gaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctctttggtaatcaatttgaaggaaagattccaaagtgcattggttc |
11501 |
T |
|
| Q |
128 |
acttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaatttacaaactcttgaccta |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||| |
|
|
| T |
11502 |
acttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtttggggaacctttccaatttacaaacttttgacctt |
11601 |
T |
|
| Q |
228 |
tcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttcatatgtcaatctcactctag |
327 |
Q |
| |
|
| | | ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||| |
|
|
| T |
11602 |
ggattatttaattac---ttgaccgcaaatgaccttgaatggctttctcatctctctaatttgagatgccttgatctatcatatgttaatcttactctag |
11698 |
T |
|
| Q |
328 |
ctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagacaatcctaaatc |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || | ||| ||||||| ||||| || |||||||||||||||||| |||||||||||| |
|
|
| T |
11699 |
ctgttgattggttgtcatcaataagcaaaattcgttatctatatgaacttaatttaaatatttgtgggctccatcaagtcaatcctaaatc |
11789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0087; HSP #4
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 28 - 411
Target Start/End: Original strand, 54042 - 54422
Alignment:
| Q |
28 |
gaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaagattccaaagtgcattggttc |
127 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54042 |
gaggtaagttagattcttcaatatgtgaactgaaacatcttacttatttaaatctcaatgataatcaatttgaaggaaagattccaaagtgcattggttc |
54141 |
T |
|
| Q |
128 |
acttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaatttacaaactcttgaccta |
227 |
Q |
| |
|
||||| ||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
54142 |
acttggtaacttgattgagttagatcttggtggtaattattttgttggtgtcattcctcctagtttggggaacctttccaatttacaaactcttgacctt |
54241 |
T |
|
| Q |
228 |
tcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttcatatgtcaatctcactctag |
327 |
Q |
| |
|
|| | | ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
54242 |
ggagtatttaattac---ttgactgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttcatatgttaatctcactctag |
54338 |
T |
|
| Q |
328 |
ctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagacaatc |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
54339 |
ctgttgattggttgtcatcaataagcaaaattccttatctatctgaactttatttatatggttgtgggctccatcaagtcaatc |
54422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0087; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 7 - 384
Target Start/End: Original strand, 32764 - 33135
Alignment:
| Q |
7 |
tagattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaa |
106 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||| |||||||||| |
|
|
| T |
32764 |
tagattatactaaaggattgcaaggtaagttagattcttcaatatgtgaactgcaacatcttacttctttaaatcttgataataatcgcattgaaggaaa |
32863 |
T |
|
| Q |
107 |
gattccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttcc |
206 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| |||||| | ||| | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
32864 |
gattccaaagtgcattggttcacttggtaagttgatagagttaaatcttattggtaacaaacttgttagtgtcattcctcctagtctagggaacctttcc |
32963 |
T |
|
| Q |
207 |
aatttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatcttt |
306 |
Q |
| |
|
||||| |||||||||||||| | ||| | | ||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| | |
|
|
| T |
32964 |
aatttgcaaactcttgaccttggatttaatgact------tgactgcaaatgaccttgaatggatttctcacctctctaatttgagataccttggtctat |
33057 |
T |
|
| Q |
307 |
catatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttat |
384 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| | |||||||||| |
|
|
| T |
33058 |
caaatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctctgtctaacctttatttat |
33135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0087; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 256 - 422
Target Start/End: Original strand, 39061 - 39227
Alignment:
| Q |
256 |
atgaccttgaatggctttctcatctctctaatttgagataccttgatctttcatatgtcaatctcactctagctgttgattggttgtcatcaataagcaa |
355 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||||| | |||| ||| || || | ||||||||||| ||||||||| ||||||||||| |
|
|
| T |
39061 |
atgaccttcaatggctttctcgcctctctaatttgagataccttgatatgtcatgtgtaaaccttagtctagctgttggttggttgtcgtcaataagcaa |
39160 |
T |
|
| Q |
356 |
aattccttctttatctgaactttatttatatgtttgtgggctccatcaagacaatcctaaatccatt |
422 |
Q |
| |
|
|||||||||| | ||||||||| |||||| |||||| |||||||||| || ||||||||||||| |
|
|
| T |
39161 |
aattccttctctgtctgaacttcatttatcaacttgtggtctccatcaagtcactcctaaatccatt |
39227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0087; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 38868 - 38995
Alignment:
| Q |
29 |
aggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaagattccaaagtgcattggttca |
128 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| || ||||||||||| |||||||||||||| ||| |
|
|
| T |
38868 |
aggtaagttagattcttcaatatgtgaattgcaacaccttacttctttaaatcttggttataatctcttagaaggaaagataccaaagtgcattggctca |
38967 |
T |
|
| Q |
129 |
cttgataagttgatagagttgaatcttg |
156 |
Q |
| |
|
|||| | | |||||||| |||||||||| |
|
|
| T |
38968 |
cttggtcaattgatagaattgaatcttg |
38995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 243; Significance: 1e-134; HSPs: 29)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 9 - 422
Target Start/End: Original strand, 5851572 - 5851979
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5851572 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaacttcaacatctaacttctttaaatctccatggtaatcaatttgaaggaaaga |
5851671 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| | ||| || ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
5851672 |
ttccaaagtgcattggttcacttgataagttgatagaactgaatcttcatgataacaatcttgttagtgtcattcctcctagtctagggaacctttccaa |
5851771 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| ||||| |||||||| | | |||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
5851772 |
tttgcaaacacttgaccttggatataattcct------taacaacaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctatca |
5851865 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
||||| ||||| |||| ||||||||||||||||||||||||||||||||||| || | ||||| ||||| ||||||||| ||||||||||||||||| || |
|
|
| T |
5851866 |
tatgttaatcttactcaagctgttgattggttgtcatcaataagcaaaattcgttatctatctcaacttaatttatatggttgtgggctccatcaagtca |
5851965 |
T |
|
| Q |
409 |
atcctaaatccatt |
422 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5851966 |
atcctaaatccatt |
5851979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5763045 - 5763453
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5763045 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5763144 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5763145 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5763244 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5763245 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5763338 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5763339 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5763438 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5763439 |
ctcctaaatctattt |
5763453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5766580 - 5766988
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5766580 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5766679 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5766680 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5766779 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5766780 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5766873 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5766874 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5766973 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5766974 |
ctcctaaatctattt |
5766988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5770115 - 5770523
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5770115 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5770214 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5770215 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5770314 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5770315 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5770408 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5770409 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5770508 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5770509 |
ctcctaaatctattt |
5770523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5773650 - 5774058
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5773650 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5773749 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5773750 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5773849 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5773850 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5773943 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5773944 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5774043 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5774044 |
ctcctaaatctattt |
5774058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5777185 - 5777593
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5777185 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5777284 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5777285 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5777384 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5777385 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5777478 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5777479 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5777578 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5777579 |
ctcctaaatctattt |
5777593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5780720 - 5781128
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5780720 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5780819 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5780820 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5780919 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5780920 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5781013 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5781014 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5781113 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5781114 |
ctcctaaatctattt |
5781128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5784255 - 5784663
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5784255 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5784354 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5784355 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5784454 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5784455 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5784548 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5784549 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5784648 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5784649 |
ctcctaaatctattt |
5784663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5787790 - 5788198
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5787790 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5787889 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5787890 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5787989 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5787990 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5788083 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5788084 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5788183 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5788184 |
ctcctaaatctattt |
5788198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5791325 - 5791733
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5791325 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5791424 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5791425 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5791524 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5791525 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5791618 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5791619 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5791718 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5791719 |
ctcctaaatctattt |
5791733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5794860 - 5795268
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5794860 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5794959 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5794960 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5795059 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5795060 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5795153 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5795154 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5795253 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5795254 |
ctcctaaatctattt |
5795268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5798395 - 5798803
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5798395 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5798494 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5798495 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5798594 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5798595 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5798688 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5798689 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5798788 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5798789 |
ctcctaaatctattt |
5798803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5801930 - 5802338
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5801930 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5802029 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5802030 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5802129 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5802130 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5802223 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5802224 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5802323 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5802324 |
ctcctaaatctattt |
5802338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5805465 - 5805873
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5805465 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5805564 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5805565 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5805664 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5805665 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5805758 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5805759 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5805858 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5805859 |
ctcctaaatctattt |
5805873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5809000 - 5809408
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5809000 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5809099 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5809100 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5809199 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5809200 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5809293 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5809294 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5809393 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5809394 |
ctcctaaatctattt |
5809408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5812535 - 5812943
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5812535 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5812634 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5812635 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5812734 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5812735 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5812828 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5812829 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5812928 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5812929 |
ctcctaaatctattt |
5812943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5816070 - 5816478
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5816070 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5816169 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5816170 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5816269 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5816270 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5816363 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5816364 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5816463 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5816464 |
ctcctaaatctattt |
5816478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 5819605 - 5820013
Alignment:
| Q |
9 |
gattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaaga |
108 |
Q |
| |
|
|||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||| || || | || |||||||||| |
|
|
| T |
5819605 |
gattatacaaaagcagttggaggtaagttagattattcaatatgtgaacttcaacatcttatttctttaaatcttgataatattggcttagaaggaaaga |
5819704 |
T |
|
| Q |
109 |
ttccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaa |
208 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| || ||| | ||| ||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
5819705 |
taccaaagtgcattggttcacttggtaagttgatagagttaaagcttatgtacaataatttttttggtgtcattcctcctagtttggggaacctttccaa |
5819804 |
T |
|
| Q |
209 |
tttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttca |
308 |
Q |
| |
|
||| |||||||||||||| ||| | ||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
5819805 |
tttgcaaactcttgacctttcacataattatt------taactgcaaatgaccttgaatggctttctcatctctctgatttgagataccttgatctatca |
5819898 |
T |
|
| Q |
309 |
tatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagaca |
408 |
Q |
| |
|
| ||||||||||| || ||| |||||||||||||||||||||||||||||| | |||| ||||||||| |||||| || ||||||||||||||||| || |
|
|
| T |
5819899 |
gaggtcaatctcacactggctattgattggttgtcatcaataagcaaaattcatactttgtctgaacttcatttatttggttgtgggctccatcaagtca |
5819998 |
T |
|
| Q |
409 |
atcctaaatccattt |
423 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5819999 |
ctcctaaatctattt |
5820013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 10 - 418
Target Start/End: Complemental strand, 5891613 - 5891208
Alignment:
| Q |
10 |
attatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaagat |
109 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | || | || | || | | || | | ||||||||||| |
|
|
| T |
5891613 |
attatactaaagcattgcgaggtaagttagattcttcaatatgtgaacttcaacatctaatttttctagaacttagttatcattacctagaaggaaagat |
5891514 |
T |
|
| Q |
110 |
tccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaat |
209 |
Q |
| |
|
||| | ||||| || ||||||| | || ||| ||||||||| ||| || ||| | |||||| ||||||||||| |||||||| |||||||||||| | |
|
|
| T |
5891513 |
cccacactgcatgggctcacttggtcagctgaaagagttgaaacttagtggtaacaaatttgttagtgtcattccttctagtctaaggaacctttccagt |
5891414 |
T |
|
| Q |
210 |
ttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttcat |
309 |
Q |
| |
|
|| ||||||||||| | || | ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
5891413 |
ttgcaaactcttgatatttcctataattattt---tatgttttcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctatcat |
5891317 |
T |
|
| Q |
310 |
atgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagacaa |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||||||||| || |
|
|
| T |
5891316 |
atgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattcattctttgtctgaacttcatttatatggttgtgggctccatcaagtcac |
5891217 |
T |
|
| Q |
410 |
tcctaaatc |
418 |
Q |
| |
|
||||||||| |
|
|
| T |
5891216 |
tcctaaatc |
5891208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 30 - 411
Target Start/End: Original strand, 5828652 - 5829027
Alignment:
| Q |
30 |
ggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaagattccaaagtgcattggttcac |
129 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||||||||||||||| | |||| |||| ||| | ||||| ||||||||||||||||||| |
|
|
| T |
5828652 |
ggtaagttagattcttcaatatgtgaactgaaacatcttacttctttaaatcttgcttataataaattagaaagtaagataccaaagtgcattggttcac |
5828751 |
T |
|
| Q |
130 |
ttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaatttacaaactcttgacctatc |
229 |
Q |
| |
|
|| ||||||||||||||| |||||| | ||| | ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
5828752 |
ttagtaagttgatagagttaaatcttattggtaacaaacttgttagtgtcattcctcctagtttagggaacctttccaatttgcaaactcttgaccttgg |
5828851 |
T |
|
| Q |
230 |
agaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttcatatgtcaatctcactctagct |
329 |
Q |
| |
|
| ||| | | ||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||| ||| | ||||||||| |||||| | |
|
|
| T |
5828852 |
atttaatgact------tgactgcaaatgaccttgaatggatttctcacctctctaatttgagacaccttggtctatcaaaggtcaatctctctctagtt |
5828945 |
T |
|
| Q |
330 |
gttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagacaatc |
411 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||| |||||| || ||||||| ||||| |
|
|
| T |
5828946 |
gttgattggttatcatcaataagcaaaattccttctttatctgaacttgatttctatggttgtggactgcatcaagtcaatc |
5829027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 5754376 - 5754559
Alignment:
| Q |
28 |
gaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaagattccaaagtgcattggttc |
127 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||| ||||||||||||||| | |||| | || ||||||||||||||||||||||||||||| |
|
|
| T |
5754376 |
gaggtaagttagattcttcaatatgtgaactgaaacatcctacttctttaaatcttggtcataattacttagaaggaaagattccaaagtgcattggttc |
5754475 |
T |
|
| Q |
128 |
acttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaattt |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5754476 |
acttgataagttgatagagttgaatcttggttataattattttgttggtgtcattcctcctagtctagggaacctttccaattt |
5754559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 99 - 405
Target Start/End: Original strand, 5878876 - 5879179
Alignment:
| Q |
99 |
gaaggaaagattccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctaggga |
198 |
Q |
| |
|
||||||||||| ||||| ||||||| ||||||| ||| ||||||||||| ||||| || |||| | ||||| ||||||||||||||||| | |||| |
|
|
| T |
5878876 |
gaaggaaagataccaaaaagcattgggtcacttggtaacttgatagagttagatcttagtggtaataaacttgttagtgtcattcctcctagtttgggga |
5878975 |
T |
|
| Q |
199 |
acctttccaatttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagatacct |
298 |
Q |
| |
|
||||||||||||| | |||||||||||| | |||||| | ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5878976 |
acctttccaatttgcgaactcttgaccttggatttaattatga---tatgatttcaaatgaccttgaatggctttctcatctctctaatttgagatacct |
5879072 |
T |
|
| Q |
299 |
tgatctttcatatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttatttatatgtttgtgggctc |
398 |
Q |
| |
|
|||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||| |||| | |||||||||| |
|
|
| T |
5879073 |
tgatatatcatttgttaatctcactctagctgttgattggttgtcatcaataagcaaaactccatctctgtctgaacttcgtttactcggttgtgggctc |
5879172 |
T |
|
| Q |
399 |
catcaag |
405 |
Q |
| |
|
||||||| |
|
|
| T |
5879173 |
catcaag |
5879179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 251 - 411
Target Start/End: Original strand, 5754578 - 5754738
Alignment:
| Q |
251 |
tgcaaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttcatatgtcaatctcactctagctgttgattggttgtcatcaata |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||| ||||||||| |
|
|
| T |
5754578 |
tgcaaatgaccttgaatggctttctcatctatctaatttgagatacattgatctttcatatgtgaatctcactctggctattgattggttctcatcaata |
5754677 |
T |
|
| Q |
351 |
agcaaaattccttctttatctgaactttatttatatgtttgtgggctccatcaagacaatc |
411 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| ||||| |
|
|
| T |
5754678 |
agcaaaattccttctttatctgaacttcatttcaatggttgtggactccatcaagtcaatc |
5754738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 5825883 - 5826141
Alignment:
| Q |
99 |
gaaggaaagattccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctaggga |
198 |
Q |
| |
|
||||||||||| ||||| | |||| ||||||| ||| ||||||||||| |||||| || |||| | ||||| |||||||||||||| || |||||| |
|
|
| T |
5825883 |
gaaggaaagataccaaaaagtgttgggtcacttggtaacttgatagagttaaatcttagtggtaataaacttgttagtgtcattcctcctggtttaggga |
5825982 |
T |
|
| Q |
199 |
acctttccaatttacaaactcttgacctatcagaaaattattacggtatgagtgcaaatgaccttgaatggctttctcatctctctaatttgagatacct |
298 |
Q |
| |
|
||||||||||||| |||||||||||||| | ||| | | ||| ||||||||||||||||||| ||||||| ||||||||||||||| |||| |
|
|
| T |
5825983 |
acctttccaatttgcaaactcttgaccttggatttaatgact------tgactgcaaatgaccttgaatggatttctcacctctctaatttgagacacct |
5826076 |
T |
|
| Q |
299 |
tgatctttcatatgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattcctt |
363 |
Q |
| |
|
|| ||| ||| | ||||||||| |||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
5826077 |
tggtctatcaaaggtcaatctctctctagttgttgattggttatcatcaataagcaaaattcctt |
5826141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 253 - 405
Target Start/End: Original strand, 5826174 - 5826326
Alignment:
| Q |
253 |
caaatgaccttgaatggctttctcatctctctaatttgagataccttgatctttcatatgtcaatctcactctagctgttgattggttgtcatcaataag |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||| ||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5826174 |
caaatgaccttgaatggctttctcatctctccaatttgagatgccttgatctatcatttgttaatctcactctagctgttgatcggttgtcatcaataag |
5826273 |
T |
|
| Q |
353 |
caaaattccttctttatctgaactttatttatatgtttgtgggctccatcaag |
405 |
Q |
| |
|
||||| | | ||| | ||||||||| ||||| | ||||||||||||||||| |
|
|
| T |
5826274 |
caaaacttcatctctgtctgaacttcatttactcggttgtgggctccatcaag |
5826326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 5825723 - 5825876
Alignment:
| Q |
11 |
ttatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaagatt |
110 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| || ||||| | | | ||||| || |
|
|
| T |
5825723 |
ttatactaaaggattgcaaggtaagttagattcttcaatatgtgaactgcaatatcttacttctataaatctcaatagtaataacctacatggaaaaatc |
5825822 |
T |
|
| Q |
111 |
ccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaat |
164 |
Q |
| |
|
||||||||||||||| |||||| | | |||||||||||||||||||||||||| |
|
|
| T |
5825823 |
ccaaagtgcattggtacacttggtcaactgatagagttgaatcttggttttaat |
5825876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 5878712 - 5878871
Alignment:
| Q |
7 |
tagattatactaaagcattgcgaggtaagttagattcttcaatatgtgaattgcaacatcttacttctttaaatctccatggtaatcaatttgaaggaaa |
106 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||| |||| |||||||| || | ||| | | | ||||| |
|
|
| T |
5878712 |
tagattatactaaaggattgcaaggtaagttagattcttcaatatgtgaactgcaatatcttagttctataaatctcaatagaaataacctacatggaaa |
5878811 |
T |
|
| Q |
107 |
gattccaaagtgcattggttcacttgataagttgatagagttgaatcttggttttaatta |
166 |
Q |
| |
|
|| |||||||||||||||||||||| | | ||||||||||||||||| ||||||||| |
|
|
| T |
5878812 |
aatcccaaagtgcattggttcacttggtcaactgatagagttgaatcttaattttaatta |
5878871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 5752062 - 5751963
Alignment:
| Q |
122 |
tggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaatttacaaactctt |
221 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| |||| |||||||| |||| |||| ||||||| | ||||||||||||||| ||||||||| |
|
|
| T |
5752062 |
tggttcacttggtcagttgatagagttgaatcttgagggtaataattttgttagtgt---tccttctagtctggagaacctttccaatttgcaaactctt |
5751966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 383
Target Start/End: Original strand, 3777891 - 3777964
Alignment:
| Q |
310 |
atgtcaatctcactctagctgttgattggttgtcatcaataagcaaaattccttctttatctgaactttattta |
383 |
Q |
| |
|
|||| ||||||||||| | |||||||| ||||||||||||||| ||||||||||| | ||||||||| ||||| |
|
|
| T |
3777891 |
atgtgaatctcactcttgtagttgattgtttgtcatcaataagcgaaattccttctctgtctgaacttcattta |
3777964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0127 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 17780 - 17879
Alignment:
| Q |
122 |
tggttcacttgataagttgatagagttgaatcttggttttaattattttgttggtgtcattcctcctagtctagggaacctttccaatttacaaactctt |
221 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| |||| |||||||| |||| |||| ||||| | ||||||||||||||||| ||||||||| |
|
|
| T |
17780 |
tggttcacttggtcagttgatagagttgaatcttgagggtaataattttgttagtgt---tccttctagtttggggaacctttccaatttccaaactctt |
17876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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