View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18706_low_19 (Length: 228)
Name: NF18706_low_19
Description: NF18706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18706_low_19 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 28106594 - 28106394
Alignment:
| Q |
13 |
catcaaacataggaatggaaggttgcgccaaacttgcataatcctccgtggataaagcttaaggaatgaaagggagaagatgaagaaacaagcataacaa |
112 |
Q |
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| T |
28106594 |
catcaaacataggaatggaaggttgcgccaaacttgcataatcctccgtggataaagcttaaggaatgaaagggagaagatgaagaaacaagcataacaa |
28106495 |
T |
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| Q |
113 |
gattgtaaacaaactttcacgtcaaagattgtgccttctaactcatgatacaagccgtaacaaaggctctacataccacttgataggagaagactcattt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28106494 |
gattgtaaacaaactttcacgtcaaagattgtgccttctaactcatgatacaagccgtaacaaaggctctacataccacttgataggagaagactcattt |
28106395 |
T |
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| Q |
213 |
g |
213 |
Q |
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| T |
28106394 |
g |
28106394 |
T |
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