View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18707_high_16 (Length: 300)
Name: NF18707_high_16
Description: NF18707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18707_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 31045200 - 31045341
Alignment:
| Q |
17 |
aatatgaatatataaaataatcttttattagaaaataaaaattacatgtacaaggaaaaagaatggtgaaacatgtactataattaagatcaatttaagc |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31045200 |
aatatgaatatataaaataatcttttattagaaaataaaaattacacgtacaaggaaaaagaatggtgaaacatgtactataattaagatcaatttaagc |
31045299 |
T |
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| Q |
117 |
ttatcttcaacaaaggtaattaactagcttggttggtaagta |
158 |
Q |
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||||||||||||| |||||||||||||||||||||||||||| |
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| T |
31045300 |
ttatcttcaacaatggtaattaactagcttggttggtaagta |
31045341 |
T |
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