View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18707_high_21 (Length: 263)
Name: NF18707_high_21
Description: NF18707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18707_high_21 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 5370944 - 5371185
Alignment:
| Q |
1 |
tggttaagtctagaatttagtatatgtaattgacatagaattaatattgaattttgaaaccttgatcagttttactccttcataataggaaactgtttac |
100 |
Q |
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| T |
5370944 |
tggttaagtctagaatttagtatatgtaattgacatagaattactattcaattttgaaaccttgatcagttttactccttcataataggaaactgtttac |
5371043 |
T |
|
| Q |
101 |
tgtttagtggaatgactatatatttatgctgataacatgaactgaaaaaatcaatgtattatttatcctatgttgttaatcgcagataacagtgcgcggc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5371044 |
tgtttagtggaatgactatatatttatgctgataacatgaactgaaaaaatcaatgtattatttatcctatgttgttaatcgcagataacagtgcgcggc |
5371143 |
T |
|
| Q |
201 |
aaactctaaaatgctatagcggatggtgagatgactgctatt |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
5371144 |
aaactctaaaatgctatagcggatggtgagatgactgctatt |
5371185 |
T |
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