View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18707_high_30 (Length: 242)
Name: NF18707_high_30
Description: NF18707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18707_high_30 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 13867479 - 13867716
Alignment:
| Q |
1 |
gaaaaattgaaggagttagcaaagaaagaaggcctgtggaacttatggattcctgtacgtatctatattctgctcttctgtgatatattttatctgtaat |
100 |
Q |
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| T |
13867479 |
gaaaaattgaaggagttagcaaagaaagaaggcctgtggaacttatggattcctgtacgtatctatattctgttcttctgtgatatattttatctgtaat |
13867578 |
T |
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| Q |
101 |
ttgttgtttcagaagctttcaacatctttccatatgtttttgaaatattacagcttcctccaaaatatttaa-caacaggcactaatttctttgtcatag |
199 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
13867579 |
ttgttgtttcagaagcttttaacatctttccatatgtttttgaaatattacagcttcctccaaaatatttaaccaacaggcactaatttctttgtcatag |
13867678 |
T |
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| Q |
200 |
accttagcaattagtgtacaagggttttcactgttttc |
237 |
Q |
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||||||||||||||||| |||||||||||||||||||| |
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| T |
13867679 |
accttagcaattagtgttcaagggttttcactgttttc |
13867716 |
T |
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