View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18707_high_33 (Length: 237)
Name: NF18707_high_33
Description: NF18707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18707_high_33 |
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Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 7079386 - 7079166
Alignment:
| Q |
1 |
ataatagtgatcggaggatatatatgttcatgaaaaatattaaacatatataacccgttgtatctttttggaactccctttttatcgtattgagattgtt |
100 |
Q |
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| T |
7079386 |
ataatagtgatcggaggatatatatgttcatgaaaaatattaaacacatataacccgttgtatctttttggaactccctttttatcgtattgagattgtt |
7079287 |
T |
|
| Q |
101 |
aaaagcattcacatcaatgtcactcgtatcaatggtataaatgtacctcaatcaatgtcccgagagcactcgttggccacttacgatcatatcaatcagt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
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| T |
7079286 |
aaaagcattcacatcaatgtcactcgtatcaatggtataaatggacctcaatcaatgtcccaagagcactcgttggccacgtacgatcatatcaatcagt |
7079187 |
T |
|
| Q |
201 |
aatatctacacaagttagaag |
221 |
Q |
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||||| | ||||||||||||| |
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| T |
7079186 |
aatatttgcacaagttagaag |
7079166 |
T |
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